View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1250_low_99 (Length: 258)
Name: NF1250_low_99
Description: NF1250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1250_low_99 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 37114156 - 37114376
Alignment:
| Q |
38 |
aacaacacactgcagttgtaggcagaagaacatattgtttccagccaacaactatatattctagaagagtatacacaattagtcacccttgatttttaac |
137 |
Q |
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| T |
37114156 |
aacaacacactgcagctgtaggcagaagaacatattgtttccagccaacaactatatattctagaagagtatacacaattagtcacccttgatttttaac |
37114255 |
T |
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| Q |
138 |
ttaagtgtcaacactgaattcataataatttcccaaatactttattagaaattattggtgctcccagagcaaaaattaatatcttgctttgtagtataat |
237 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
37114256 |
ttaagtgtcaacactgaattcataataatttcccaaatactttattagaaattattggtgctcccagagcaaaaattaatctcttgctttgtagtataat |
37114355 |
T |
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| Q |
238 |
aatcactgtctccaacttcaa |
258 |
Q |
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||||||||||||| ||||||| |
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| T |
37114356 |
aatcactgtctccgacttcaa |
37114376 |
T |
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