View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12511_high_17 (Length: 280)
Name: NF12511_high_17
Description: NF12511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12511_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 37063861 - 37064122
Alignment:
| Q |
1 |
gttccaaagaaagaattgtgtgacaaatccaaatagatgacatttgctgatatatgtgggagccctcctctgaaattattgtggtccataaatagaagtt |
100 |
Q |
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| T |
37063861 |
gttccaaagaaagaattgtgtgacaaatccaaatagatgacatttgctgatatatgtgggagccctcctctgaaattattgtggtccataaatagaagtt |
37063960 |
T |
|
| Q |
101 |
ccgagtttagcgtgacatttgataagtctgcactcatgctgttgttagacaagttaagctgtgtaatattagttacaaatctccaaaatatgtctccatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
37063961 |
ccgagtttagcgtgacatttgataagtctgcactcatgctgttgttagacaagttaaggtgtgtaatattagttacaaatctccaaaatatgtctccatc |
37064060 |
T |
|
| Q |
201 |
tatggatgaaactctagagttaggaatctcaagatattctagcgacctttgtgtatatatcc |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
37064061 |
tatggatgaaactctagagttaggaatctcaagatattctagtgacctttgtgtatatatcc |
37064122 |
T |
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