View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12511_high_21 (Length: 246)
Name: NF12511_high_21
Description: NF12511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12511_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 43048756 - 43048987
Alignment:
| Q |
10 |
taacacccggacctcttaaaaagaaaatggtctaacacccggacttgaggg-agtttatggttgagagtatattgcttgattgagtttattagctaaata |
108 |
Q |
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| T |
43048756 |
taacacccggacctcttaaaaaaaaaatggtctaacacccggacttgaggggagtttatggttgagagtatattgcttgactgagtttattagctaaata |
43048855 |
T |
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| Q |
109 |
tgattgttaatgttctttttatagtagataacgagtc---nnnnnnnnnnnnggtgaatggtcttgtttgttagaaactattaggattaatggtatgaat |
205 |
Q |
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| T |
43048856 |
ttattgctaatggtctttttttagtatataacgagtctttttttttttttttggtgaatggtcttgtttgttagaaactattaggattaatggtatgaat |
43048955 |
T |
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| Q |
206 |
taaattaataacaaaataaaaatccagtgaac |
237 |
Q |
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| T |
43048956 |
taaattaataacaaaataaaaatccagagaac |
43048987 |
T |
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