View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12511_low_32 (Length: 240)
Name: NF12511_low_32
Description: NF12511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12511_low_32 |
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Alignment Details
Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 37810022 - 37810225
Alignment:
| Q |
19 |
cgaacatcaaggactaacacatgttgggcactgacgccttcaacccaaagtatcggtgttacataacctatagctactaatttggccatatgactagtac |
118 |
Q |
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| T |
37810022 |
cgaacatcaaggactaacacac-ttgggcactgacgccttcaacccaaagtatcggtgttacataacctatagctactaatttggccatatgactagtac |
37810120 |
T |
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| Q |
119 |
tctaaacgcttctctttcaaggcatgagtcaatatatttggaataaagaagtagtgcatgtgacacaaaataatgcttgtactaagtcaaagtgttaata |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37810121 |
tctaaacgcttctctttcaaggcatgagtcaatatatttggaataaagaagtagtgcatgtgacacaaaataatgcttgtactaagtcaaagtgttaata |
37810220 |
T |
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| Q |
219 |
tacct |
223 |
Q |
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||||| |
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| T |
37810221 |
tacct |
37810225 |
T |
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