View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12511_low_36 (Length: 226)

Name: NF12511_low_36
Description: NF12511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12511_low_36
NF12511_low_36
[»] chr1 (38 HSPs)
chr1 (13-210)||(8275962-8276159)
chr1 (13-184)||(38056671-38056842)
chr1 (75-184)||(28476733-28476842)
chr1 (100-184)||(50544841-50544925)
chr1 (93-185)||(24719509-24719600)
chr1 (93-184)||(12710829-12710920)
chr1 (21-95)||(4595933-4596007)
chr1 (97-183)||(22145666-22145752)
chr1 (93-184)||(24007224-24007315)
chr1 (120-184)||(17901793-17901857)
chr1 (20-184)||(8306494-8306659)
chr1 (107-184)||(6834152-6834229)
chr1 (93-184)||(39061283-39061373)
chr1 (120-184)||(34392757-34392821)
chr1 (123-184)||(635003-635064)
chr1 (120-184)||(35895088-35895152)
chr1 (120-184)||(45499531-45499595)
chr1 (93-184)||(21188033-21188123)
chr1 (54-93)||(44822110-44822149)
chr1 (41-92)||(51324415-51324466)
chr1 (47-93)||(7320683-7320729)
chr1 (54-93)||(7052011-7052050)
chr1 (145-184)||(7703136-7703175)
chr1 (60-183)||(19676641-19676763)
chr1 (93-184)||(20708058-20708148)
chr1 (93-135)||(40390112-40390155)
chr1 (103-141)||(14792604-14792642)
chr1 (129-183)||(20588636-20588690)
chr1 (129-183)||(20593174-20593228)
chr1 (103-141)||(21243799-21243837)
chr1 (93-141)||(18121565-18121614)
chr1 (60-93)||(20633723-20633756)
chr1 (93-141)||(38887128-38887177)
chr1 (131-184)||(42913049-42913102)
chr1 (120-184)||(12327742-12327806)
chr1 (131-183)||(21046049-21046101)
chr1 (33-89)||(42912952-42913008)
chr1 (120-184)||(51336468-51336532)
[»] chr4 (36 HSPs)
chr4 (13-184)||(9638892-9639063)
chr4 (75-184)||(14631079-14631188)
chr4 (93-184)||(16296900-16296991)
chr4 (75-184)||(25513795-25513904)
chr4 (77-177)||(35660902-35661002)
chr4 (75-185)||(26446151-26446261)
chr4 (20-183)||(33186792-33186955)
chr4 (93-183)||(12424290-12424383)
chr4 (93-185)||(2424385-2424477)
chr4 (117-184)||(15239815-15239882)
chr4 (123-194)||(13847193-13847264)
chr4 (105-169)||(15747787-15747851)
chr4 (105-166)||(17142996-17143057)
chr4 (93-184)||(14477594-14477684)
chr4 (93-184)||(18462986-18463076)
chr4 (120-184)||(9622478-9622542)
chr4 (120-184)||(10273372-10273436)
chr4 (120-184)||(55583185-55583249)
chr4 (93-141)||(12623278-12623327)
chr4 (93-141)||(19565959-19566008)
chr4 (131-184)||(37019670-37019723)
chr4 (93-141)||(45314124-45314173)
chr4 (94-141)||(26921550-26921598)
chr4 (131-184)||(15115222-15115275)
chr4 (60-93)||(16998455-16998488)
chr4 (165-202)||(19739772-19739809)
chr4 (60-93)||(25091583-25091616)
chr4 (165-202)||(27996825-27996862)
chr4 (108-141)||(46741177-46741210)
chr4 (60-93)||(53630563-53630596)
chr4 (131-183)||(11425943-11425995)
chr4 (65-93)||(14549695-14549723)
chr4 (131-183)||(19610324-19610376)
chr4 (131-183)||(25091653-25091705)
chr4 (131-183)||(42875797-42875849)
chr4 (131-183)||(53630474-53630526)
[»] scaffold0220 (2 HSPs)
scaffold0220 (15-202)||(13833-14019)
scaffold0220 (130-196)||(19953-20019)
[»] scaffold0328 (1 HSPs)
scaffold0328 (13-184)||(18639-18811)
[»] chr3 (54 HSPs)
chr3 (13-184)||(14641547-14641718)
chr3 (75-184)||(17208468-17208577)
chr3 (20-196)||(14152386-14152562)
chr3 (93-184)||(14520408-14520499)
chr3 (95-184)||(29907603-29907692)
chr3 (95-184)||(29948769-29948858)
chr3 (95-184)||(29997923-29998012)
chr3 (93-183)||(5215608-5215699)
chr3 (94-184)||(15566706-15566797)
chr3 (120-184)||(22841278-22841342)
chr3 (107-176)||(45803338-45803407)
chr3 (105-169)||(2247880-2247944)
chr3 (77-184)||(3160626-3160732)
chr3 (78-184)||(21845651-21845756)
chr3 (32-93)||(11563627-11563687)
chr3 (120-184)||(2841505-2841569)
chr3 (120-183)||(54875474-54875537)
chr3 (74-196)||(16050871-16050992)
chr3 (93-143)||(48631294-48631344)
chr3 (43-93)||(49968948-49968998)
chr3 (40-93)||(9511005-9511058)
chr3 (40-93)||(9518980-9519033)
chr3 (107-184)||(12917305-12917382)
chr3 (120-184)||(3527156-3527220)
chr3 (120-184)||(6156700-6156763)
chr3 (120-184)||(6159394-6159458)
chr3 (93-194)||(17684824-17684926)
chr3 (121-185)||(24548952-24549016)
chr3 (77-122)||(13520404-13520449)
chr3 (93-141)||(53646100-53646149)
chr3 (93-141)||(54330348-54330397)
chr3 (120-184)||(14442164-14442228)
chr3 (131-183)||(17539106-17539158)
chr3 (33-93)||(50348115-50348175)
chr3 (93-184)||(6003148-6003238)
chr3 (31-89)||(14508747-14508806)
chr3 (93-184)||(50350815-50350908)
chr3 (130-184)||(33565086-33565140)
chr3 (60-93)||(10563638-10563671)
chr3 (60-93)||(17044896-17044929)
chr3 (60-93)||(17518962-17518995)
chr3 (60-93)||(17533824-17533857)
chr3 (131-184)||(24177735-24177788)
chr3 (120-185)||(24547189-24547254)
chr3 (60-93)||(40807926-40807959)
chr3 (131-184)||(40807996-40808049)
chr3 (131-184)||(44274418-44274471)
chr3 (60-93)||(49900660-49900693)
chr3 (131-183)||(11259431-11259483)
chr3 (131-183)||(17044966-17045018)
chr3 (131-183)||(17047126-17047178)
chr3 (131-183)||(17541434-17541486)
chr3 (131-183)||(22306583-22306635)
chr3 (57-93)||(42324061-42324097)
[»] chr6 (37 HSPs)
chr6 (13-184)||(19825485-19825656)
chr6 (75-210)||(15998833-15998968)
chr6 (93-185)||(21683073-21683164)
chr6 (31-105)||(17318200-17318274)
chr6 (95-184)||(18982536-18982625)
chr6 (93-184)||(23658050-23658142)
chr6 (95-183)||(20410512-20410600)
chr6 (120-184)||(29045260-29045324)
chr6 (93-184)||(1818915-1819005)
chr6 (77-184)||(34140455-34140560)
chr6 (93-143)||(24506155-24506205)
chr6 (120-184)||(10446206-10446270)
chr6 (60-184)||(15890711-15890834)
chr6 (33-93)||(28948477-28948537)
chr6 (93-196)||(31734669-31734772)
chr6 (77-184)||(34153071-34153176)
chr6 (47-93)||(23501588-23501634)
chr6 (93-141)||(7217285-7217333)
chr6 (95-138)||(18982379-18982422)
chr6 (93-141)||(22557210-22557259)
chr6 (93-184)||(25921963-25922054)
chr6 (54-89)||(18585729-18585764)
chr6 (106-184)||(13285723-13285801)
chr6 (43-93)||(19401007-19401057)
chr6 (20-141)||(23431488-23431609)
chr6 (60-93)||(7827902-7827935)
chr6 (165-202)||(16966800-16966837)
chr6 (165-202)||(18259155-18259192)
chr6 (165-202)||(20183754-20183791)
chr6 (165-202)||(22152200-22152237)
chr6 (60-93)||(23150376-23150409)
chr6 (60-93)||(27330070-27330103)
chr6 (60-93)||(27390810-27390843)
chr6 (131-183)||(7827972-7828024)
chr6 (130-194)||(12041609-12041673)
chr6 (131-183)||(19655231-19655283)
chr6 (131-183)||(23150287-23150339)
[»] chr7 (58 HSPs)
chr7 (54-184)||(708428-708558)
chr7 (77-184)||(19195558-19195664)
chr7 (93-185)||(43745618-43745710)
chr7 (75-184)||(15575648-15575757)
chr7 (13-88)||(17070384-17070459)
chr7 (95-196)||(8513740-8513842)
chr7 (75-184)||(20252181-20252290)
chr7 (93-184)||(47095414-47095505)
chr7 (95-196)||(8488081-8488183)
chr7 (75-185)||(4690661-4690771)
chr7 (75-184)||(18874664-18874772)
chr7 (121-184)||(38299738-38299801)
chr7 (93-183)||(43276744-43276834)
chr7 (75-185)||(48212725-48212837)
chr7 (120-184)||(16250221-16250285)
chr7 (33-93)||(13132410-13132469)
chr7 (105-169)||(34958319-34958383)
chr7 (120-184)||(58412-58476)
chr7 (120-184)||(13315081-13315145)
chr7 (33-93)||(15095726-15095785)
chr7 (75-146)||(16186857-16186928)
chr7 (130-184)||(3287743-3287797)
chr7 (47-93)||(15140130-15140176)
chr7 (93-143)||(42565872-42565922)
chr7 (54-196)||(47974807-47974948)
chr7 (126-183)||(19283051-19283108)
chr7 (120-184)||(13744509-13744573)
chr7 (115-179)||(15700887-15700951)
chr7 (33-93)||(33002064-33002124)
chr7 (33-93)||(48807415-48807474)
chr7 (54-93)||(8135326-8135365)
chr7 (93-184)||(15700734-15700824)
chr7 (120-183)||(25943256-25943319)
chr7 (93-141)||(9743120-9743169)
chr7 (105-169)||(831864-831928)
chr7 (105-169)||(1197044-1197108)
chr7 (120-184)||(8930764-8930828)
chr7 (60-184)||(12127162-12127285)
chr7 (57-93)||(13698728-13698764)
chr7 (120-184)||(18570636-18570700)
chr7 (92-184)||(21661218-21661309)
chr7 (93-135)||(15119354-15119397)
chr7 (54-92)||(14274256-14274294)
chr7 (131-193)||(20214147-20214209)
chr7 (94-184)||(33060402-33060491)
chr7 (60-93)||(12465349-12465382)
chr7 (60-93)||(13147561-13147594)
chr7 (93-141)||(14160897-14160946)
chr7 (131-184)||(14180397-14180450)
chr7 (93-141)||(14318034-14318083)
chr7 (131-184)||(20586352-20586405)
chr7 (60-93)||(20620216-20620249)
chr7 (131-183)||(8851159-8851211)
chr7 (131-183)||(11067468-11067520)
chr7 (131-183)||(12372274-12372326)
chr7 (131-183)||(12465260-12465312)
chr7 (131-183)||(32433589-32433641)
chr7 (130-194)||(35771430-35771494)
[»] chr8 (39 HSPs)
chr8 (77-185)||(36732410-36732518)
chr8 (75-183)||(18816295-18816403)
chr8 (75-183)||(21514635-21514743)
chr8 (93-184)||(22208230-22208322)
chr8 (75-185)||(4380615-4380725)
chr8 (93-183)||(22258306-22258397)
chr8 (93-184)||(12577841-12577932)
chr8 (77-184)||(21676592-21676697)
chr8 (33-95)||(20022120-20022181)
chr8 (78-184)||(21678845-21678949)
chr8 (96-184)||(21676499-21676585)
chr8 (120-179)||(22483775-22483834)
chr8 (105-169)||(18023570-18023634)
chr8 (33-93)||(45469309-45469368)
chr8 (120-184)||(21399706-21399770)
chr8 (120-184)||(21794199-21794263)
chr8 (120-184)||(22345153-22345217)
chr8 (120-184)||(22356813-22356877)
chr8 (120-184)||(22610266-22610330)
chr8 (33-93)||(31722583-31722642)
chr8 (105-169)||(38184926-38184990)
chr8 (20-141)||(22474646-22474767)
chr8 (107-169)||(22483914-22483976)
chr8 (20-183)||(21579206-21579368)
chr8 (121-184)||(36305988-36306050)
chr8 (20-141)||(12037205-12037326)
chr8 (47-93)||(22318000-22318046)
chr8 (131-196)||(17906836-17906901)
chr8 (93-141)||(29762909-29762958)
chr8 (33-194)||(39694266-39694426)
chr8 (120-183)||(18834412-18834474)
chr8 (60-183)||(20083638-20083760)
chr8 (33-92)||(22532222-22532281)
chr8 (33-92)||(22536907-22536966)
chr8 (93-135)||(22966772-22966815)
chr8 (60-93)||(5082301-5082334)
chr8 (93-141)||(17978457-17978506)
chr8 (60-93)||(19140695-19140728)
chr8 (93-141)||(41680174-41680223)
[»] scaffold0676 (1 HSPs)
scaffold0676 (77-184)||(2827-2934)
[»] scaffold1186 (1 HSPs)
scaffold1186 (75-184)||(1964-2073)
[»] scaffold0005 (1 HSPs)
scaffold0005 (75-184)||(186195-186304)
[»] chr5 (22 HSPs)
chr5 (77-184)||(16063697-16063804)
chr5 (75-184)||(18744818-18744927)
chr5 (75-183)||(23199207-23199315)
chr5 (77-184)||(6551289-6551396)
chr5 (93-185)||(660752-660842)
chr5 (75-179)||(1627071-1627176)
chr5 (93-196)||(26762364-26762467)
chr5 (120-184)||(32607315-32607379)
chr5 (93-185)||(1626916-1627008)
chr5 (54-92)||(30138064-30138102)
chr5 (93-141)||(14025848-14025897)
chr5 (60-93)||(17876133-17876166)
chr5 (93-185)||(26749993-26750085)
chr5 (54-183)||(36508633-36508761)
chr5 (165-220)||(21914455-21914510)
chr5 (93-135)||(24068191-24068234)
chr5 (54-93)||(31456884-31456923)
chr5 (20-141)||(8833247-8833368)
chr5 (130-184)||(21398643-21398697)
chr5 (107-184)||(20313253-20313328)
chr5 (131-184)||(21300043-21300096)
chr5 (93-138)||(21504102-21504147)
[»] scaffold0056 (1 HSPs)
scaffold0056 (75-185)||(18219-18329)
[»] scaffold0878 (1 HSPs)
scaffold0878 (93-184)||(3421-3512)
[»] chr2 (30 HSPs)
chr2 (93-184)||(21315475-21315566)
chr2 (93-184)||(21335265-21335356)
chr2 (75-185)||(23610570-23610680)
chr2 (75-184)||(21369237-21369346)
chr2 (20-184)||(149500-149668)
chr2 (47-93)||(3539753-3539799)
chr2 (93-143)||(25584302-25584352)
chr2 (48-93)||(25142121-25142166)
chr2 (120-184)||(23801485-23801549)
chr2 (96-143)||(19647199-19647246)
chr2 (93-184)||(20005970-20006060)
chr2 (16-141)||(28652593-28652717)
chr2 (107-184)||(34491239-34491316)
chr2 (120-184)||(28344987-28345051)
chr2 (54-93)||(357805-357844)
chr2 (54-93)||(1383632-1383671)
chr2 (27-93)||(19201289-19201355)
chr2 (60-93)||(24884400-24884433)
chr2 (33-93)||(27852570-27852630)
chr2 (33-93)||(22251537-22251597)
chr2 (60-184)||(24516116-24516239)
chr2 (104-184)||(45535899-45535978)
chr2 (60-93)||(5031218-5031251)
chr2 (60-93)||(9975859-9975892)
chr2 (60-93)||(17307416-17307449)
chr2 (131-184)||(17307486-17307539)
chr2 (60-93)||(24780929-24780962)
chr2 (131-184)||(40912320-40912373)
chr2 (131-183)||(5031129-5031181)
chr2 (131-183)||(24780840-24780892)
[»] scaffold0007 (3 HSPs)
scaffold0007 (20-184)||(16418-16584)
scaffold0007 (107-184)||(18700-18777)
scaffold0007 (95-138)||(18902-18945)
[»] scaffold0247 (1 HSPs)
scaffold0247 (91-183)||(1036-1128)
[»] scaffold0061 (2 HSPs)
scaffold0061 (95-184)||(14585-14674)
scaffold0061 (95-184)||(23643-23732)
[»] scaffold0231 (1 HSPs)
scaffold0231 (93-184)||(17520-17611)
[»] scaffold0203 (1 HSPs)
scaffold0203 (75-184)||(17939-18048)
[»] scaffold0505 (1 HSPs)
scaffold0505 (93-183)||(4898-4988)
[»] scaffold1256 (1 HSPs)
scaffold1256 (96-185)||(2198-2287)
[»] scaffold0516 (1 HSPs)
scaffold0516 (93-185)||(5303-5395)
[»] scaffold0853 (1 HSPs)
scaffold0853 (75-183)||(2454-2564)
[»] scaffold0213 (2 HSPs)
scaffold0213 (93-184)||(19169-19260)
scaffold0213 (93-130)||(19123-19160)
[»] scaffold0431 (1 HSPs)
scaffold0431 (93-183)||(5592-5685)
[»] scaffold0369 (1 HSPs)
scaffold0369 (75-184)||(15615-15723)
[»] scaffold0108 (1 HSPs)
scaffold0108 (103-184)||(6390-6471)
[»] scaffold0032 (2 HSPs)
scaffold0032 (93-184)||(61847-61937)
scaffold0032 (165-210)||(68331-68376)
[»] scaffold0174 (4 HSPs)
scaffold0174 (122-184)||(5445-5507)
scaffold0174 (107-183)||(11592-11668)
scaffold0174 (120-184)||(19845-19909)
scaffold0174 (60-93)||(11320-11353)
[»] scaffold0594 (1 HSPs)
scaffold0594 (107-184)||(2223-2300)
[»] scaffold1766 (1 HSPs)
scaffold1766 (131-210)||(669-748)
[»] scaffold0092 (1 HSPs)
scaffold0092 (93-184)||(38441-38531)
[»] scaffold0058 (1 HSPs)
scaffold0058 (77-184)||(59655-59761)
[»] scaffold0020 (3 HSPs)
scaffold0020 (131-210)||(168972-169051)
scaffold0020 (93-196)||(174183-174286)
scaffold0020 (131-183)||(143611-143663)
[»] scaffold0139 (2 HSPs)
scaffold0139 (93-184)||(40160-40253)
scaffold0139 (100-184)||(23503-23587)
[»] scaffold0004 (5 HSPs)
scaffold0004 (107-184)||(66071-66148)
scaffold0004 (115-196)||(111344-111425)
scaffold0004 (120-183)||(73076-73139)
scaffold0004 (120-184)||(75926-75990)
scaffold0004 (60-93)||(328379-328412)
[»] scaffold0298 (1 HSPs)
scaffold0298 (105-169)||(359-423)
[»] scaffold0337 (1 HSPs)
scaffold0337 (93-184)||(3167-3257)
[»] scaffold0148 (1 HSPs)
scaffold0148 (20-184)||(8731-8897)
[»] scaffold0017 (2 HSPs)
scaffold0017 (93-180)||(26689-26776)
scaffold0017 (93-184)||(23576-23666)
[»] scaffold0086 (1 HSPs)
scaffold0086 (107-184)||(35185-35262)
[»] scaffold0180 (1 HSPs)
scaffold0180 (105-169)||(10570-10633)
[»] scaffold0076 (1 HSPs)
scaffold0076 (163-219)||(22463-22519)
[»] scaffold0394 (1 HSPs)
scaffold0394 (93-184)||(7513-7603)
[»] scaffold0251 (1 HSPs)
scaffold0251 (32-93)||(20174-20235)
[»] scaffold0037 (3 HSPs)
scaffold0037 (41-94)||(117889-117941)
scaffold0037 (33-93)||(113057-113116)
scaffold0037 (64-93)||(81501-81530)
[»] scaffold0628 (1 HSPs)
scaffold0628 (33-93)||(1148-1207)
[»] scaffold0371 (1 HSPs)
scaffold0371 (93-196)||(10433-10536)
[»] scaffold0031 (2 HSPs)
scaffold0031 (120-184)||(127342-127406)
scaffold0031 (47-93)||(108208-108255)
[»] scaffold0379 (1 HSPs)
scaffold0379 (120-183)||(10937-10999)
[»] scaffold0125 (1 HSPs)
scaffold0125 (93-143)||(28513-28564)
[»] scaffold0021 (2 HSPs)
scaffold0021 (100-143)||(17075-17118)
scaffold0021 (100-143)||(26606-26649)
[»] scaffold0848 (1 HSPs)
scaffold0848 (43-93)||(2110-2160)
[»] scaffold0555 (1 HSPs)
scaffold0555 (118-184)||(8745-8811)
[»] scaffold0217 (1 HSPs)
scaffold0217 (81-143)||(28664-28726)
[»] scaffold0175 (1 HSPs)
scaffold0175 (33-87)||(8545-8598)
[»] scaffold0162 (1 HSPs)
scaffold0162 (75-133)||(23932-23990)
[»] scaffold0385 (1 HSPs)
scaffold0385 (93-141)||(307-356)
[»] scaffold1941 (1 HSPs)
scaffold1941 (60-184)||(68-191)
[»] scaffold0121 (1 HSPs)
scaffold0121 (23-130)||(20092-20199)
[»] scaffold0098 (1 HSPs)
scaffold0098 (120-184)||(40096-40160)
[»] scaffold0083 (2 HSPs)
scaffold0083 (41-93)||(10842-10894)
scaffold0083 (61-93)||(5124-5156)
[»] scaffold0048 (1 HSPs)
scaffold0048 (120-184)||(68725-68789)
[»] scaffold0035 (1 HSPs)
scaffold0035 (120-184)||(43786-43848)
[»] scaffold0001 (6 HSPs)
scaffold0001 (131-183)||(31994-32046)
scaffold0001 (131-183)||(37301-37353)
scaffold0001 (60-93)||(31924-31957)
scaffold0001 (60-93)||(37231-37264)
scaffold0001 (131-184)||(77687-77740)
scaffold0001 (165-202)||(499092-499129)
[»] scaffold1800 (1 HSPs)
scaffold1800 (93-184)||(570-660)
[»] scaffold0230 (1 HSPs)
scaffold0230 (54-89)||(6778-6813)
[»] scaffold0165 (1 HSPs)
scaffold0165 (93-184)||(31892-31982)
[»] scaffold0156 (1 HSPs)
scaffold0156 (54-93)||(16528-16567)
[»] scaffold0149 (2 HSPs)
scaffold0149 (54-93)||(21535-21574)
scaffold0149 (60-93)||(29662-29695)
[»] scaffold0145 (1 HSPs)
scaffold0145 (93-135)||(8086-8129)
[»] scaffold0120 (1 HSPs)
scaffold0120 (93-135)||(29273-29316)
[»] scaffold0059 (1 HSPs)
scaffold0059 (93-184)||(49692-49782)
[»] scaffold0040 (1 HSPs)
scaffold0040 (54-93)||(106140-106179)
[»] scaffold0462 (2 HSPs)
scaffold0462 (93-127)||(1279-1313)
scaffold0462 (93-127)||(6785-6819)
[»] scaffold0338 (2 HSPs)
scaffold0338 (54-92)||(161-199)
scaffold0338 (165-198)||(10747-10780)
[»] scaffold0063 (1 HSPs)
scaffold0063 (20-141)||(62608-62729)
[»] scaffold1939 (1 HSPs)
scaffold1939 (93-138)||(90-135)
[»] scaffold1633 (2 HSPs)
scaffold1633 (60-93)||(1135-1168)
scaffold1633 (131-183)||(1205-1257)
[»] scaffold1283 (2 HSPs)
scaffold1283 (60-93)||(557-590)
scaffold1283 (131-183)||(468-520)
[»] scaffold0737 (1 HSPs)
scaffold0737 (60-93)||(4803-4836)
[»] scaffold0632 (2 HSPs)
scaffold0632 (60-93)||(1095-1128)
scaffold0632 (131-184)||(1165-1218)
[»] scaffold0630 (1 HSPs)
scaffold0630 (93-141)||(9025-9074)
[»] scaffold0439 (1 HSPs)
scaffold0439 (93-185)||(4383-4475)
[»] scaffold0261 (1 HSPs)
scaffold0261 (93-133)||(6468-6509)
[»] scaffold0241 (2 HSPs)
scaffold0241 (60-93)||(2494-2527)
scaffold0241 (60-93)||(3112-3145)
[»] scaffold0205 (1 HSPs)
scaffold0205 (107-184)||(5615-5690)
[»] scaffold0113 (1 HSPs)
scaffold0113 (131-184)||(35490-35543)
[»] scaffold0111 (1 HSPs)
scaffold0111 (60-93)||(12622-12655)
[»] scaffold0080 (1 HSPs)
scaffold0080 (60-93)||(21882-21915)
[»] scaffold0065 (1 HSPs)
scaffold0065 (165-202)||(55975-56012)
[»] scaffold0859 (1 HSPs)
scaffold0859 (33-93)||(4586-4645)
[»] scaffold0047 (1 HSPs)
scaffold0047 (131-183)||(79049-79101)
[»] scaffold0036 (1 HSPs)
scaffold0036 (131-183)||(78185-78237)
[»] scaffold0028 (1 HSPs)
scaffold0028 (57-89)||(3145-3177)
[»] scaffold0019 (1 HSPs)
scaffold0019 (131-183)||(24131-24183)
[»] scaffold0008 (1 HSPs)
scaffold0008 (33-93)||(135593-135652)


Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 8276159 - 8275962
Alignment:
Q  13 tggacatcaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8276159 tggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaaatatcaacaa 8276060  T
Q  113 ctacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctct 210  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8276059 ctacaaggttaaaccctttttcagaattataccactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctct 8275962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 38056842 - 38056671
Alignment:
Q  13 tggacatcaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38056842 tggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaa 38056743  T
Q  113 ctacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||    
T  38056742 ctacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtcccacccttaccttag 38056671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 28476842 - 28476733
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||    
T  28476842 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtcccacc 28476743  T
Q  175 cttaccttag 184  Q
    ||||||||||    
T  28476742 cttaccttag 28476733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 50544841 - 50544925
Alignment:
Q  100 aaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  50544841 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 50544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 24719600 - 24719509
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||    
T  24719600 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc-cacccttaccatagg 24719509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 12710829 - 12710920
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||||| || | |||||||||    
T  12710829 aacatcaaaactaacaacaactacaagattaaaccctttttcagaattatacaacccaatattagagaaagctagtcccatctttaccttag 12710920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 4596007 - 4595933
Alignment:
Q  21 aattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaac 95  Q
    |||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4596007 aattatcaacctaattcatcggattatctactcttaaatcaaccaattacaacttctaaatctaattcccaaaac 4595933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 22145752 - 22145666
Alignment:
Q  97 tcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| ||||| |||||||||||||    
T  22145752 tcaaacctaacaacaactacaaggttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 24007315 - 24007224
Alignment:
Q  93 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||    
T  24007315 aacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaa-tcattatcagagaaagctagtcccacccttaccttag 24007224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 17901857 - 17901793
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  17901857 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 17901793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 8306494 - 8306659
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaag 119  Q
    ||||||||||| ||||||||| ||||| ||||||||  | ||| |||||  || ||| || ||||||| | | ||||||||||||| ||| ||| ||||     
T  8306494 caattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaactaacaa-aacgacaac 8306592  T
Q  120 --gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
      ||||||||| |||| ||||||||||||| |||||||||| |||||||||| ||| ||||||||||    
T  8306593 atgttaaacccctttttagaattatacaacccattattagagaaagctagtcccactcttaccttag 8306659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 6834152 - 6834229
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||||||    
T  6834152 caacaacaaccatgttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttag 6834229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 39061283 - 39061373
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||| |||| | || | ||||| ||| ||||||||||    
T  39061283 aacatcaaaactatcaacaactacaaggttaaaccttttttcagaattata-tactcatgattacagaaggttagtcccactcttaccttag 39061373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 34392757 - 34392821
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  34392757 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcacacccttaccttag 34392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 635064 - 635003
Alignment:
Q  123 aaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||| |||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  635064 aaacccttttttagaattatacaacctattattagagaaagctagtctcacccttaccttag 635003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 35895088 - 35895152
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||||||  |||| ||||||||    
T  35895088 gttaaaacctttttcagaatcatacaacccattattagataaagctagtcctacccataccttag 35895152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 45499531 - 45499595
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  45499531 gttaaacccctttatagaatcatacaacccattattagagaaagctagtctcacccttaccttag 45499595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 21188123 - 21188033
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||||||||  ||||| ||||| ||| |||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  21188123 aacatcaaaactatcaacaactacaaaattaaatcctttctcaaaattata-tactcatgattaaaaaaggttagtcccacccttaccttag 21188033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 44822149 - 44822110
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  44822149 ttaaaacaaccaattacaacttctaaacctaattcccaaa 44822110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 51324415 - 51324466
Alignment:
Q  41 agattatctactcttaaatcaaccaattacaacttctaaacctaattcccaa 92  Q
    ||||| |||||| ||||| |||||||||||||||| ||||||||||||||||    
T  51324415 agattttctactattaaaacaaccaattacaacttttaaacctaattcccaa 51324466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 7320729 - 7320683
Alignment:
Q  47 tctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||    
T  7320729 tctactattaaatcaaccaattacaacatctaaacataattcccaaa 7320683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 7052050 - 7052011
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  7052050 ttaaaacaaccaattacaatttctaaacctaattcccaaa 7052011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 7703136 - 7703175
Alignment:
Q  145 aactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  7703136 aactcattattagagaaagctagtcccacccttaccttag 7703175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 183
Target Start/End: Original strand, 19676641 - 19676763
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 159  Q
    ||||||||||||||||| ||||||||||||||||   ||| |||||  | | || || | | ||||| |  |||||||||||||||||| |  ||||||     
T  19676641 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac-atgctaaactcaatttcagaattatacaacttagaattagag 19676739  T
Q  160 aaagctagtcacacccttacctta 183  Q
    |||| ||||| |||||||||||||    
T  19676740 aaagttagtcccacccttacctta 19676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 20708148 - 20708058
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| || ||||||||||  ||| ||||| |||||||||||||||||| |||||| | ||| | || | ||||| ||||||||||||||    
T  20708148 aacatcacaattatcaacaacatcaaagttaacccctttttcagaattatagaactca-tgttaaagaaggttagtcccacccttaccttag 20708058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 40390112 - 40390155
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  40390112 aacatcaaaacctattaacaactacaaggttaaaccctttttca 40390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 14792642 - 14792604
Alignment:
Q  103 ctatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  14792642 ctattaacaactacaaggttaaaccctttttcaggatta 14792604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 20588636 - 20588690
Alignment:
Q  129 tttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||| ||||| ||||||| |||||||||| ||||||| || |||||||||||||    
T  20588636 ttttttagaatcatacaacccattattagagaaagctaatcccacccttacctta 20588690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 20593174 - 20593228
Alignment:
Q  129 tttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||| ||||| ||||||| |||||||||| ||||||| || |||||||||||||    
T  20593174 ttttttagaatcatacaacccattattagagaaagctaatcccacccttacctta 20593228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 21243837 - 21243799
Alignment:
Q  103 ctatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  21243837 ctattaacaactacaaggttaaaccctttttcaggatta 21243799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 18121565 - 18121614
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||| ||||    
T  18121565 aacatcaaaacctattaacaactacaaggttaaatcctttttcaggatta 18121614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 20633756 - 20633723
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  20633756 caaccaattacaacttcaaaacctaattcccaaa 20633723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 38887177 - 38887128
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||| ||||    
T  38887177 aacatcaaaacctattaacaactacaagattaaaccctttttcaggatta 38887128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 42913049 - 42913102
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  42913049 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 42913102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 12327806 - 12327742
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||| || |||||||||| |||||||| |  |||||| |||| ||||| ||||||||||||||    
T  12327806 gttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttag 12327742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 21046101 - 21046049
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  21046101 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 21046049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 42912952 - 42913008
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcc 89  Q
    |||||| |||||| ||||||||   | ||||||||||||||||| ||||||||||||    
T  42912952 aattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcc 42913008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 51336468 - 51336532
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||| || |||||||||| |||||||| |  |||||| |||| ||||| ||||||||||||||    
T  51336468 gttaaatccattttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 51336532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 9638892 - 9639063
Alignment:
Q  13 tggacatcaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9638892 tggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaattatcaacaa 9638991  T
Q  113 ctacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  9638992 ctacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttaccttag 9639063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 14631079 - 14631188
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  14631079 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacc 14631178  T
Q  175 cttaccttag 184  Q
    ||||||||||    
T  14631179 cttaccttag 14631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 16296900 - 16296991
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  16296900 aacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttag 16296991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 25513795 - 25513904
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  25513795 tctaaccctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacc 25513894  T
Q  175 cttaccttag 184  Q
     |||||||||    
T  25513895 attaccttag 25513904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 35660902 - 35661002
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||||||||||  | ||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||| ||||||    
T  35660902 taaacctaattcatataacatcaaaactaacaacaactacaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccct 35661001  T
Q  177 t 177  Q
    |    
T  35661002 t 35661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 26446151 - 26446261
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||  |||    
T  26446151 tctaaccctaatttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtcctacc 26446250  T
Q  175 cttaccttagg 185  Q
    ||||| |||||    
T  26446251 cttactttagg 26446261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 33186792 - 33186955
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-tatcaacaactacaa 118  Q
    ||||||| | ||||||||||| ||||||||||||||    ||| |||||  |  ||| || ||||||||  | ||||||||||| ||| |||||| ||||    
T  33186792 caattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattct-acaacatcaaaacctattaacaaccacaa 33186890  T
Q  119 ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||||    
T  33186891 ggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccctacctta 33186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 12424383 - 12424290
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaacccttttt--cagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||  |||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  12424383 aacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 12424290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 2424477 - 2424385
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    |||||||||||||  |||||||||||| ||||||||||||||| |||||||||||| |  |||||| |||| ||||| |||||||||||||||    
T  2424477 aacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctcacccttaccttagg 2424385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 15239882 - 15239815
Alignment:
Q  117 aaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||    
T  15239882 aaggttaaaccctttttcagatttatacaattcattattagagaaagctagtctcacccttaccttag 15239815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 13847193 - 13847264
Alignment:
Q  123 aaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 194  Q
    ||||| ||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||    
T  13847193 aaaccattttttagaattatacaacccattattagagaaagctagtctcacccttaccttaggttaatcgat 13847264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 15747851 - 15747787
Alignment:
Q  105 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  ||||| |||| |||||    
T  15747851 atcaacaactacaatgttaaaccctttttcagaattatacaactcatctttagagaaagttagtc 15747787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 17142996 - 17143057
Alignment:
Q  105 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagcta 166  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||  ||||| |||||||    
T  17142996 atcaacaactacaatgttaaaccccttttcagaattatacaactcatctttagagaaagcta 17143057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 14477594 - 14477684
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||  |||||| |||| | || | ||||  ||||||||||||||    
T  14477594 aacatcaaaactatcaacgactacaagatcaaaccctttttcagaattata-tactcatgattaaagaaggttagtgccacccttaccttag 14477684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 18462986 - 18463076
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||  |||||| |||| | || | ||||| |||| |||||||||    
T  18462986 aacatcaaaactattaacaactacaaaattaaaccctttttcagaattata-tactcatgattaaagaaggttagtcccacctttaccttag 18463076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 9622478 - 9622542
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| | ||||| |||||||||| |||||||||| ||||||||||||||    
T  9622478 gttaaacccctttttagaatcagacaacccattattagagaaagctagtcccacccttaccttag 9622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 10273372 - 10273436
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||| |||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  10273372 gttatacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 10273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 55583185 - 55583249
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| | ||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  55583185 gttaaacccctttttataatcatacaacccattattagagaaagctagtcccacccttaccttag 55583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 12623278 - 12623327
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  12623278 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 12623327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 19566008 - 19565959
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  19566008 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 19565959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 37019670 - 37019723
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||||||||||||||||||    
T  37019670 tttcagaattatacaacttaaaattagagaaagttagtcacacccttaccttag 37019723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 45314173 - 45314124
Alignment:
Q  93 aacatcaaaactatcaacaactacaag-gttaaaccctttttcagaatta 141  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  45314173 aacatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 45314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 26921598 - 26921550
Alignment:
Q  94 acatcaaaactatcaacaactacaag-gttaaaccctttttcagaatta 141  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  26921598 acatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 26921550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 15115222 - 15115275
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  15115222 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15115275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 16998455 - 16998488
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  16998455 caaccaattacaacttcaaaacctaattcccaaa 16998488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 19739772 - 19739809
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggcagcc 202  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  19739772 tagtctcacccttaccttaggataatcgattggcagcc 19739809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 25091583 - 25091616
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  25091583 caaccaattacaacttcaaaacctaattcccaaa 25091616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 27996825 - 27996862
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggcagcc 202  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  27996825 tagtcccacccttaccttaggataatcgattggcagcc 27996862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 46741177 - 46741210
Alignment:
Q  108 aacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||||||||||||||||||||| ||||    
T  46741177 aacaactacaaggttaaaccctttttcaggatta 46741210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 53630596 - 53630563
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  53630596 caaccaattacaacttcaaaacctaattcccaaa 53630563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 11425943 - 11425995
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  11425943 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 11425995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 93
Target Start/End: Original strand, 14549695 - 14549723
Alignment:
Q  65 aattacaacttctaaacctaattcccaaa 93  Q
    |||||||||||||||||||||||||||||    
T  14549695 aattacaacttctaaacctaattcccaaa 14549723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 19610324 - 19610376
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  19610324 tttcagaattatacaacttaaaattagagaaagttagtctcacccttacctta 19610376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 25091653 - 25091705
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  25091653 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 25091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 42875797 - 42875849
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||| |||||| ||||| |||||||||||||    
T  42875797 tttcagaattatacaacttagaattatataaagttagtcccacccttacctta 42875849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 53630526 - 53630474
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  53630526 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 53630474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 13833 - 14019
Alignment:
Q  15 gacatcaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaact 114  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13833 gacaccaattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaact 13932  T
Q  115 acaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcc 202  Q
     ||||||||||||||||||||||||| |||||| |||||||||| |||||||||| ||||||||||||| ||| | ||||||||||||    
T  13933 tcaaggttaaaccctttttcagaattttacaacccattattagagaaagctagtcccacccttacctta-gattaacgatcggcagcc 14019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 19953 - 20019
Alignment:
Q  130 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 196  Q
    ||||||||||||||  ||| |  |||||| |||| ||||| ||||||||||||||| ||||||||||    
T  19953 ttttcagaattataacacttagaattagagaaagttagtcccacccttaccttaggttaatcgatcg 20019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 18811 - 18639
Alignment:
Q  13 tggacatcaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 112  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18811 tggacaccaattattaccctaattcatcagattatctagtcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaa 18712  T
Q  113 ctacaaggttaaaccctttttcagaatta-tacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  18711 ctacaaggttaaaccttttttcaaaattattacaactcattattagagaaagctagtcccacccttaccttag 18639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 4e-71; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 14641718 - 14641547
Alignment:
Q  13 tggacatcaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  14641718 tggacaccaattattaccctaattcatcagattatctactcttaaatcaacaaattacaacttctaaacctaattcccaaaacatcaatactaacaacaa 14641619  T
Q  113 ctacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| || ||||||||||||||    
T  14641618 ctacaaggttaaacccttttttagaattatacaacccattattagagaaagctaatcccacccttaccttag 14641547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 17208468 - 17208577
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  17208468 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtcccacc 17208567  T
Q  175 cttaccttag 184  Q
    ||||||||||    
T  17208568 cttaccttag 17208577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 14152562 - 14152386
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-tatcaacaactacaa 118  Q
    ||||||| | ||||||||||| |||||||||||||| |  ||| |||||  |  ||| || ||||||||  | ||||||||||| ||  |||||||||||    
T  14152562 caattatcaacctaattcatcggattatctactctttatacaatcaattttagtttcaaaccctaattct-acaacatcaaaacctactaacaactacaa 14152464  T
Q  119 ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 196  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||| |||||    
T  14152463 ggttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccacccttaccttaggttaatggatcg 14152386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 14520408 - 14520499
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||| | |||||||||| ||||||||||||||    
T  14520408 aacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtcccacccttaccttag 14520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 29907603 - 29907692
Alignment:
Q  95 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||| ||||||||||||||    
T  29907603 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttag 29907692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 29948769 - 29948858
Alignment:
Q  95 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||| ||||||||||||||    
T  29948769 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttag 29948858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 29997923 - 29998012
Alignment:
Q  95 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||| ||||||||||||||    
T  29997923 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttag 29998012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 5215608 - 5215699
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||    
T  5215608 aacatcaaaacctattaataactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtgccacccttacctta 5215699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 15566706 - 15566797
Alignment:
Q  94 acatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||||||| ||||    
T  15566706 acatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttag 15566797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 22841342 - 22841278
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||||    
T  22841342 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacattag 22841278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 45803407 - 45803338
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  45803407 caacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 45803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 2247944 - 2247880
Alignment:
Q  105 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 169  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  2247944 atcaacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 2247880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 3160732 - 3160626
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||||||||| | | || ||||||||||||||||||||||| ||||||||| |||| |||||||||  |||||| |||| | || | ||||| ||||||    
T  3160732 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaacccatttttagaattata-tactcatgattaaagaaggttagtctcaccct 3160634  T
Q  177 taccttag 184  Q
    ||||||||    
T  3160633 taccttag 3160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 21845756 - 21845651
Alignment:
Q  78 aaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccctt 177  Q
    |||||||||| | | |||||||||||||| |||||||||||| |||||||||||||||||| ||||  ||| || |||| | || | ||||| |||||||    
T  21845756 aaacctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tacttatgattaaagaaggttagtcccaccctt 21845658  T
Q  178 accttag 184  Q
    |||||||    
T  21845657 accttag 21845651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 11563627 - 11563687
Alignment:
Q  32 taattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  11563627 taattcaacagatt-tctactcttaattcaaccaattacaacttttaaacctaattcccaaa 11563687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 2841569 - 2841505
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||  |||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  2841569 gttaaacctctttttagaatcatacaacccattattagagaaagctagtcacacccttaccttag 2841505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 54875537 - 54875474
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| |||||||||||||    
T  54875537 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 16050871 - 16050992
Alignment:
Q  74 ttctaaacctaattcccaaaacatcaaaactatcaacaactacaag--gttaaaccctttttcagaattatacaactcattattagataaagctagtcac 171  Q
    ||||||||||||||| |||| | ||||||||| |||||  |||||   |||||||||  ||||||||| |||||||| |  |||||| |||| ||||| |    
T  16050871 ttctaaacctaattctcaaatcctcaaaacta-caaca--tacaacttgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtccc 16050967  T
Q  172 acccttaccttaggataatcgatcg 196  Q
    |||||||||||||| ||||||||||    
T  16050968 acccttaccttaggttaatcgatcg 16050992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 48631294 - 48631344
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 143  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  48631294 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 48631344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 49968998 - 49968948
Alignment:
Q  43 attatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  49968998 attagctactattaaatcaaccaattacaacttataaacctaattcccaaa 49968948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 9511058 - 9511005
Alignment:
Q  40 cagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  9511058 cagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaa 9511005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 9519033 - 9518980
Alignment:
Q  40 cagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  9519033 cagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaa 9518980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 12917382 - 12917305
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| || | |||||||||||||| ||||| ||||||| |||||||||| |||| ||||| |||||||| |||||    
T  12917382 caacaacaaccatgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttag 12917305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 3527220 - 3527156
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| | ||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  3527220 gttaaacccctttttaaaatcatacaacccattattagagaaagctagtcccacccttaccttag 3527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 6156700 - 6156763
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  6156700 gttaaacccctttt-agaatcatacaacccattattagagaaagctagtcccacccttaccttag 6156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 6159394 - 6159458
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| ||||| |||| ||||||||||||||    
T  6159394 gttaaacccctttttagaatcatacaacccattattagagaaagcgagtctcacccttaccttag 6159458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 17684926 - 17684824
Alignment:
Q  93 aacatcaaaactatcaacaactacaag--gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataat 190  Q
    ||||||||||||| ||| ||| |||||  ||||||||| |||| ||||| ||||||| |||||||| | ||| |||||| ||||||||||||| || |||    
T  17684926 aacatcaaaactaacaa-aacaacaagatgttaaacccctttttagaatcatacaacccattattacagaaaactagtcccacccttaccttaagaaaat 17684828  T
Q  191 cgat 194  Q
    ||||    
T  17684827 cgat 17684824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 24549016 - 24548952
Alignment:
Q  121 ttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    |||||||| |||| ||||| ||||||| ||||||||||||||| ||||| ||||||||| |||||    
T  24549016 ttaaacccctttttagaatcatacaacccattattagataaagttagtctcacccttactttagg 24548952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 13520404 - 13520449
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggtt 122  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||    
T  13520404 taaacctaattcctataacatcaaaactaacaacaactacaaggtt 13520449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 53646149 - 53646100
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  53646149 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 53646100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 54330397 - 54330348
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  54330397 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 54330348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 14442164 - 14442228
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||  |||| ||||| ||||||| |||||||| | |||||||||| ||||||||||||||    
T  14442164 gttaaaccgctttttagaatcatacaacccattattacagaaagctagtcccacccttaccttag 14442228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 17539106 - 17539158
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  ||||||||||| ||||| |||||||||||||    
T  17539106 tttcagaattatacaacttagaattagataaagttagtctcacccttacctta 17539158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 50348175 - 50348115
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| ||||||||   | ||||||||||||||||| ||||||||||||||||    
T  50348175 aattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 50348115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 6003148 - 6003238
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| || ||||||||||  ||| ||||  |||||||||||||||||| |||||| ||||| | || | ||||| ||||||||||||||    
T  6003148 aacatcacaattatcaacaacatcaaagttagcccctttttcagaattatagaactca-tattaaagaaggttagtcccacccttaccttag 6003238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 14508747 - 14508806
Alignment:
Q  31 ctaattcatcagattatctactcttaaatcaaccaattacaactt-ctaaacctaattcc 89  Q
    |||||||||||||||||||||||||    |||||||||||||||| | ||||||||||||    
T  14508747 ctaattcatcagattatctactctttctacaaccaattacaacttccaaaacctaattcc 14508806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 50350908 - 50350815
Alignment:
Q  93 aacatcaaaactatcaacaactac-aaggttaaaccc--tttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||| ||| |||||| ||||||||||||  |||||||||||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  50350908 aacatcaaaactaacaaaaactacaaaggttaaaccccttttttcagaattata-tactcatgattaaagaaggttagtcccacccttaccttag 50350815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 33565086 - 33565140
Alignment:
Q  130 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||| ||| |  |||||| |||| ||||||||||||||||||||    
T  33565086 ttttcagaattataccacttagaattagagaaagttagtcacacccttaccttag 33565140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 10563638 - 10563671
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  10563638 caaccaattacaacttcaaaacctaattcccaaa 10563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 17044896 - 17044929
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  17044896 caaccaattacaacttcaaaacctaattcccaaa 17044929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 17518995 - 17518962
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  17518995 caaccaattacaacttcaaaacctaattcccaaa 17518962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 17533857 - 17533824
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  17533857 caaccaattacaacttcaaaacctaattcccaaa 17533824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 24177788 - 24177735
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| || |||||| |||| | ||| ||||||||||||||    
T  24177788 tttcagaattatacaacttataattagagaaagtttgtcccacccttaccttag 24177735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 24547189 - 24547254
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    ||||||| | |||| ||||| ||||||| |||||||||| |||| ||||| || ||||||||||||    
T  24547189 gttaaactcctttttagaatcatacaacccattattagagaaagatagtctcatccttaccttagg 24547254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 40807926 - 40807959
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  40807926 caaccaattacaacttcaaaacctaattcccaaa 40807959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 40807996 - 40808049
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  40807996 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 40808049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 44274418 - 44274471
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  44274418 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 44274471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 49900660 - 49900693
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  49900660 caaccaattacaacttcaaaacctaattcccaaa 49900693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 11259431 - 11259483
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  11259431 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 11259483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 17044966 - 17045018
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  17044966 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17045018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 17047126 - 17047178
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  17047126 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17047178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 17541434 - 17541486
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  17541434 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17541486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 22306635 - 22306583
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  22306635 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 22306583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 42324097 - 42324061
Alignment:
Q  57 aatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42324097 aatcaaccaattacaacttctaaccctaatttccaaa 42324061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 3e-66; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 19825656 - 19825485
Alignment:
Q  13 tggacatcaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 112  Q
    |||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  19825656 tggacaccaattattaccctaattcatcatatcatctactcttaaatcaaccaattacaacttctaaacataattctcaaaacatcaaaactaacaacaa 19825557  T
Q  113 ctacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||    
T  19825556 ctacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtctcacccttaccttag 19825485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 210
Target Start/End: Original strand, 15998833 - 15998968
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  15998833 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacttagaattagagaaagttagtctcacc 15998932  T
Q  175 cttaccttaggataatcgatcggcagcccttcctct 210  Q
    ||||||||||||||||||| ||  ||||||||||||    
T  15998933 cttaccttaggataatcgaccgatagcccttcctct 15998968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 21683164 - 21683073
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  21683164 aacatcaaaacta-caacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttagg 21683073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 17318274 - 17318200
Alignment:
Q  31 ctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaacta 105  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  17318274 ctaattcatcagattatctattcttaaatcaactaatcacaacttctaaacctaattcccaaaacatcaaaacta 17318200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 18982536 - 18982625
Alignment:
Q  95 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || |||| |||||||||    
T  18982536 catcaaacctagcaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatcccaccgttaccttag 18982625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 23658050 - 23658142
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||| ||||||||||||||    
T  23658050 aacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttaccttag 23658142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 95 - 183
Target Start/End: Complemental strand, 20410600 - 20410512
Alignment:
Q  95 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| |  |||||||||||||    
T  20410600 catcaaaactaataacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagctatttccacccttacctta 20410512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 29045260 - 29045324
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  29045260 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttag 29045324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 1818915 - 1819005
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||  |||||| |||| | || | ||||| ||||||||||||||    
T  1818915 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttag 1819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 34140560 - 34140455
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||| ||||||| | ||||||||||||| ||||||||||||| |||||||   ||||| ||||||| ||| ||||||||||  ||||||||| ||||||    
T  34140560 taaacttaattcctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattata-aacccattattaga-gaagctagtcccaccct 34140463  T
Q  177 taccttag 184  Q
    ||||||||    
T  34140462 taccttag 34140455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 24506205 - 24506155
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 143  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  24506205 aacatcaaaactatcaacaactacaaaattaaaccctttttcagaattata 24506155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 10446206 - 10446270
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  10446206 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 10446270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 15890834 - 15890711
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 159  Q
    ||||||||||||||||| ||||||||||||||||  | ||||||||  | | || ||| | |||||| |  |||||||||||||||||| |  ||||||     
T  15890834 caaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaacatg-ttaaactcaatttcagaattatacaacttagaattagag 15890736  T
Q  160 aaagctagtcacacccttaccttag 184  Q
    |||| ||||| ||||||||||||||    
T  15890735 aaagttagtcccacccttaccttag 15890711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 28948477 - 28948537
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| || ||| |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  28948477 aattcaacatattttctactattaaaacaaccaattacaacttctaaacctaattcccaaa 28948537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 31734669 - 31734772
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 191  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||||||| |  ||| || |||| | || | ||||| ||||||||||||||| |||||    
T  31734669 aacatcaaaacctattaacaactgcaaggttaaaccctttttcagaattaca-tacttatgattaaagaaggttagtcccacccttaccttaggttaatc 31734767  T
Q  192 gatcg 196  Q
    |||||    
T  31734768 gatcg 31734772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 34153176 - 34153071
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||| ||||||| | ||||||||||||| ||||||||||||| ||||| |   ||||| ||||||| ||| ||||||||||  ||||||||| ||||||    
T  34153176 taaacttaattcctataacatcaaaactaacaacaactacaagattaaaacagatttcaaaattata-aacccattattaga-gaagctagtcccaccct 34153079  T
Q  177 taccttag 184  Q
    ||||||||    
T  34153078 taccttag 34153071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 23501588 - 23501634
Alignment:
Q  47 tctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||    
T  23501588 tctacttttaaatcaacaaattacaacttctaaacctaattcccaaa 23501634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 7217333 - 7217285
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  7217333 aacatcaaacctattaacaactacaaggttaaaccctttttcaggatta 7217285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 18982379 - 18982422
Alignment:
Q  95 catcaaaactatcaacaactacaaggttaaaccctttttcagaa 138  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  18982379 catcaaaactatcaacaactacaaaattaaaccctttttcagaa 18982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 22557210 - 22557259
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  22557210 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 22557259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 25921963 - 25922054
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||| ||| |||||||||||||||||||||||||| || |||| |  ||| || |||| |||| | ||||| ||||||||||||||    
T  25921963 aacatcaaaacctattaacaactacaaggttaaacccttttttaggattaca-tacttatgattaaataaggttagtcccacccttaccttag 25922054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 18585729 - 18585764
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcc 89  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18585729 ttaaaacaaccaattacaacttctaaacctaattcc 18585764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 13285723 - 13285801
Alignment:
Q  106 tcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||| |||| | ||||||| |||||||||||||  ||||||| |||| | || | ||||| ||||||||||||||    
T  13285723 tcaacaacaacaatggtaaaccccttttcagaattatgaaactcatgattatagaaggttagtcccacccttaccttag 13285801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 19401007 - 19401057
Alignment:
Q  43 attatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||| ||||| ||||||||| |||||||||||| |||||||||||| ||||    
T  19401007 attagctactattaaatcaaacaattacaacttataaacctaattctcaaa 19401057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 23431609 - 23431488
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-tatcaacaactacaa 118  Q
    ||||||| | ||||||||||| ||||||||||||||    ||| |||||  |  ||| || ||||||||  | ||||||||||| ||| | |||||||||    
T  23431609 caattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattct-acaacatcaaaacctattagcaactacaa 23431511  T
Q  119 ggttaaaccctttttcagaatta 141  Q
    |||||||||||||||||| ||||    
T  23431510 ggttaaaccctttttcaggatta 23431488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 7827902 - 7827935
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  7827902 caaccaattacaacttcaaaacctaattcccaaa 7827935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 16966800 - 16966837
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggcagcc 202  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  16966800 tagtctcacccttaacttaggataatcgatcggcagcc 16966837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 18259192 - 18259155
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggcagcc 202  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  18259192 tagtcccacccttaccttaggataatcgattggcagcc 18259155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 20183754 - 20183791
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggcagcc 202  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  20183754 tagtcccacccttaccttaggttaatcgatcggcagcc 20183791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 22152237 - 22152200
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggcagcc 202  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  22152237 tagtcccacccttaccttaggttaatcgatcggcagcc 22152200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 23150409 - 23150376
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  23150409 caaccaattacaacttcaaaacctaattcccaaa 23150376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 27330103 - 27330070
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  27330103 caaccaattacaacttcaaaacctaattcccaaa 27330070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 27390843 - 27390810
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  27390843 caaccaattacaacttcaaaacctaattcccaaa 27390810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 7827972 - 7828024
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  7827972 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 7828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 12041673 - 12041609
Alignment:
Q  130 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 194  Q
    ||||||||||||||||||| |  |||| | || | ||||| ||||||||||||||| ||||||||    
T  12041673 ttttcagaattatacaacttagaattaaagaaggttagtcccacccttaccttaggttaatcgat 12041609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 19655283 - 19655231
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  19655283 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 19655231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 23150339 - 23150287
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  23150339 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 23150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 708558 - 708428
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 153  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||    
T  708558 ttaaaacaaccaattacaacttctaaacctaattcctataacatcaaaactaacagcaactacaaggttaaaccctttttcagaattatacaacccatta 708459  T
Q  154 ttagataaagctagtcacacccttaccttag 184  Q
    ||||| |||||||||| ||||| ||||||||    
T  708458 ttagagaaagctagtcccacccctaccttag 708428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 19195558 - 19195664
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||    
T  19195558 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttt-cagaattatacaactcattattagagaaagctagtcccaccct 19195656  T
Q  177 taccttag 184  Q
    ||||||||    
T  19195657 taccttag 19195664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 43745618 - 43745710
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  43745618 aacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtcccacccttaccttagg 43745710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 15575757 - 15575648
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  15575757 tctaaccctaatttctataacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacc 15575658  T
Q  175 cttaccttag 184  Q
    | ||||||||    
T  15575657 cctaccttag 15575648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 17070459 - 17070384
Alignment:
Q  13 tggacatcaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattc 88  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17070459 tggacaccaattattaccctaattcatcagattatctacacttaaatcaaccaattacaacttctaaacctaattc 17070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 8513842 - 8513740
Alignment:
Q  95 catcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcga 193  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| ||||| ||||||||||||||| |||||||    
T  8513842 catcaaaacctataaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcga 8513743  T
Q  194 tcg 196  Q
    |||    
T  8513742 tcg 8513740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 20252290 - 20252181
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||    
T  20252290 tctaatcctaatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacc 20252191  T
Q  175 cttaccttag 184  Q
    ||||||||||    
T  20252190 cttaccttag 20252181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 47095414 - 47095505
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||    
T  47095414 aacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtcccacccttaccttag 47095505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 8488183 - 8488081
Alignment:
Q  95 catcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcga 193  Q
    ||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||| |||| ||||| ||||||||||||||| |||||||    
T  8488183 catcaaaacctataaacaactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcga 8488084  T
Q  194 tcg 196  Q
    |||    
T  8488083 tcg 8488081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 4690771 - 4690661
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  4690771 tctaaccctaatttctataacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacc 4690672  T
Q  175 cttaccttagg 185  Q
     ||||||||||    
T  4690671 tttaccttagg 4690661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 18874772 - 18874664
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccc--tttttcagaattatacaactcattattagataaagctagtcaca 172  Q
    ||||| ||||||| | | ||||||||||||| ||||   |||||||||||||||  ||||||||||||||||||| |||||||||| |||||||||| ||    
T  18874772 tctaaccctaatttctataacatcaaaactaccaac---tacaaggttaaaccccttttttcagaattatacaacccattattagagaaagctagtctca 18874676  T
Q  173 cccttaccttag 184  Q
    ||||||||||||    
T  18874675 cccttaccttag 18874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 38299738 - 38299801
Alignment:
Q  121 ttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 38299801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 43276834 - 43276744
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||| |||||||||| |||| ||||| |||||||||||||    
T  43276834 aacatcaaaacctattaacaactacaaggttaaaccatttt-cagaattatacaacccattattagagaaagttagtcccacccttacctta 43276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 48212837 - 48212725
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccc--tttttcagaattatacaactcattattagataaagctagtcaca 172  Q
    ||||| ||||||| | | ||||||||||||| |||||| ||||| |||||||||  ||||| ||||| |||||||  |||||| || |||||||||||||    
T  48212837 tctaaccctaatttctataacatcaaaactaacaacaattacaatgttaaacccctttttttagaatcatacaacctattattggagaaagctagtcaca 48212738  T
Q  173 cccttaccttagg 185  Q
    |||||||||||||    
T  48212737 cccttaccttagg 48212725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 16250285 - 16250221
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  16250285 gttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttag 16250221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 13132469 - 13132410
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  13132469 aattcaacagatt-tctactcttaaatcaaccgattacaacttctaaacctaattcccaaa 13132410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 34958319 - 34958383
Alignment:
Q  105 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 169  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||  ||||| ||||||||||    
T  34958319 atcaacaactacaatgttaaatcctttttcagaattatacaactcatctttagagaaagctagtc 34958383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 58476 - 58412
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  58476 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 58412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 13315145 - 13315081
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||||||||| ||||||| |||||||||| |||| ||||| ||||||||||||||    
T  13315145 gttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttaccttag 13315081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 15095785 - 15095726
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||||||    
T  15095785 aattcaacagatt-tctactattaaatcaactaattacaacttctaaacctaattcccaaa 15095726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 16186857 - 16186928
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaa 146  Q
    ||||| ||||||| | | |||||||||||||  |||||| | ||||||||||||||||||||||||||||||    
T  16186857 tctaaccctaatttctataacatcaaaactactaacaaccataaggttaaaccctttttcagaattatacaa 16186928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 3287743 - 3287797
Alignment:
Q  130 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  3287743 ttttcagaattatacaacctattattagagaaagctagtctcacccttaccttag 3287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 15140130 - 15140176
Alignment:
Q  47 tctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||    
T  15140130 tctactattaaatcaaccaattacaacttttaaacctaattcccaaa 15140176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 42565922 - 42565872
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 143  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||||||||    
T  42565922 aacaacaaaattatcaacaactacaagattaaaccctttttcagaattata 42565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 47974948 - 47974807
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 153  Q
    ||||| |||||||||||||||||||||| |||||||||||    ||||||||  | | || ||  | ||||| ||  ||||||||| |||||||| |  |    
T  47974948 ttaaaacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctg-ttaaatccagtttcagaatcatacaacttagaa 47974850  T
Q  154 ttagataaagctagtcacacccttaccttaggataatcgatcg 196  Q
    ||||| |||| ||||| ||||||||||||||| ||||||||||    
T  47974849 ttagagaaagttagtctcacccttaccttaggttaatcgatcg 47974807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 19283051 - 19283108
Alignment:
Q  126 ccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||||||| |||| ||||| |||| ||||| |||||||||||||    
T  19283051 ccctttttcagaattatacaacccattcttagagaaagttagtctcacccttacctta 19283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 13744573 - 13744509
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||| ||| |||||||||| |||||||||| ||||||||||||||    
T  13744573 gttaaacccctttttagaatcataaaacccattattagagaaagctagtcccacccttaccttag 13744509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 15700951 - 15700887
Alignment:
Q  115 acaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttac 179  Q
    |||| ||||||||| |||| ||||| |||||||||||||||||| |||||||||| | |||||||    
T  15700951 acaatgttaaacccctttttagaatcatacaactcattattagagaaagctagtctcccccttac 15700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 33002064 - 33002124
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| |||||| ||| | |||||||||||||||||||| |||||||||||||    
T  33002064 aattcaacagattctctactattacaacaaccaattacaacttctaaccctaattcccaaa 33002124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 48807474 - 48807415
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| |||||||||||||||||||||||||||||||  ||| ||||||||||    
T  48807474 aattcaacagatt-tctactcttaaatcaaccaattacaacttctgtaccaaattcccaaa 48807415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 8135365 - 8135326
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  8135365 ttaaatcaaccaattacaacttctaaacctaattctcaaa 8135326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 15700824 - 15700734
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||| ||||||| ||||||||||| | |||||||| |||| ||||  ||||||| |||||||||| |||||||||  || |||||||||||    
T  15700824 aacattaaaactaacaacaactacatg-ttaaacccctttttagaaccatacaacccattattagagaaagctagtatcatccttaccttag 15700734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 25943256 - 25943319
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||| |||||| ||  ||||||| |||||||||| |||||||||| |||||||||||||    
T  25943256 gttaaaccccttttcaaaaacatacaacccattattagagaaagctagtcccacccttacctta 25943319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 9743169 - 9743120
Alignment:
Q  93 aacatcaaaact-atcaacaactacaaggttaaaccctttttcagaatta 141  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  9743169 aacatcaaaacttattaacaactacaaggttaaaccctttttcaggatta 9743120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 831928 - 831864
Alignment:
Q  105 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 169  Q
    |||||||||||||| |||||||||||||| |||||| |||||| |||  ||||| ||| ||||||    
T  831928 atcaacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaaactagtc 831864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 1197108 - 1197044
Alignment:
Q  105 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 169  Q
    |||||||||||||| |||||||||||||| |||||| |||||| |||  ||||| ||| ||||||    
T  1197108 atcaacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaaactagtc 1197044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 8930828 - 8930764
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||  ||||| ||||||||||||||    
T  8930828 gttaaacccctttttagaatcatacaacccattattagagaaatgtagtcccacccttaccttag 8930764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 12127285 - 12127162
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 159  Q
    ||||||||||||||||| ||||||||||||||||    || |||||  | | || ||| | |||||| |  |||||||||||||||||| |  ||||||     
T  12127285 caaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaacatg-ttaaactcaatttcagaattatacaacttagaattagag 12127187  T
Q  160 aaagctagtcacacccttaccttag 184  Q
    |||| ||||| ||||||||||||||    
T  12127186 aaagttagtcccacccttaccttag 12127162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 13698764 - 13698728
Alignment:
Q  57 aatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||||||||| |||||||||||||    
T  13698764 aatcaaccaattacaacttctaaccctaattcccaaa 13698728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 18570636 - 18570700
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||  |||||  |||||| |||||||||| |||||||||| ||||||||||||||    
T  18570636 gttaaacccctttctagaatcttacaacccattattagagaaagctagtctcacccttaccttag 18570700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 21661218 - 21661309
Alignment:
Q  92 aaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||| || ||||||||||  ||| ||||  |||||||||||||||||| |||||| ||||| | || | ||||| ||||||||||||||    
T  21661218 aaacatcacaattatcaacaacatcaaagttagcccctttttcagaattatataactca-tattaaagaaggttagtcccacccttaccttag 21661309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 15119397 - 15119354
Alignment:
Q  93 aacatcaaaa-ctatcaacaactacaaggttaaaccctttttca 135  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  15119397 aacatcaaaatctattaacaactacaaggttaaaccctttttca 15119354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 14274256 - 14274294
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaa 92  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  14274256 ttaaaacaacaaattacaacttctaaacctaattcccaa 14274294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 20214147 - 20214209
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcga 193  Q
    ||||||||||||||||||||  ||| || |||| ||||| ||||||||||||||  |||||||    
T  20214147 tttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttagattaatcga 20214209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 33060402 - 33060491
Alignment:
Q  94 acatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| ||| |||||| ||||  |||||||||||| ||||||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  33060402 acatcaaaattataaacaacaacaaaattaaacccttttccagaattata-gactcatgattaaagaaggttagtcccacccttaccttag 33060491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 12465382 - 12465349
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  12465382 caaccaattacaacttcaaaacctaattcccaaa 12465349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 13147594 - 13147561
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  13147594 caaccaattacaacttcaaaacctaattcccaaa 13147561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 14160946 - 14160897
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||||| ||||    
T  14160946 aacatcaaaacctattaacaactacaaggttaaaccccttttcaggatta 14160897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 14180450 - 14180397
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||  ||||||||||||||||||||    
T  14180450 tttcagaattatacaacttagaattagagaaaattagtcacacccttaccttag 14180397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 14318034 - 14318083
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||| ||||    
T  14318034 aacatcaaaacctattaacaactgcaaggttaaaccctttttcaggatta 14318083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 20586352 - 20586405
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  20586352 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 20586405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 20620216 - 20620249
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  20620216 caaccaattacaacttcaaaacctaattcccaaa 20620249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 8851211 - 8851159
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  8851211 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 8851159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 11067468 - 11067520
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  11067468 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 11067520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 12372274 - 12372326
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  12372274 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12372326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 12465312 - 12465260
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  12465312 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 32433641 - 32433589
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  32433641 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 32433589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 35771494 - 35771430
Alignment:
Q  130 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 194  Q
    ||||||||||||||  ||| |  |||||| |||| ||||| ||||||||||||||| ||||||||    
T  35771494 ttttcagaattatatcacttagaattagagaaagttagtcccacccttaccttaggttaatcgat 35771430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 36732518 - 36732410
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  36732518 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacaccct 36732419  T
Q  177 taccttagg 185  Q
    |||||||||    
T  36732418 taccttagg 36732410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 18816403 - 18816295
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||    
T  18816403 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtcccacc 18816304  T
Q  175 cttacctta 183  Q
    |||||||||    
T  18816303 cttacctta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 21514635 - 21514743
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||    
T  21514635 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtcccacc 21514734  T
Q  175 cttacctta 183  Q
    |||||||||    
T  21514735 cttacctta 21514743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 22208230 - 22208322
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  22208230 aacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 22208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 4380725 - 4380615
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  4380725 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacc 4380626  T
Q  175 cttaccttagg 185  Q
    |||||||||||    
T  4380625 cttaccttagg 4380615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 22258397 - 22258306
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  22258397 aacatcaaaacctatcaacaactgcaaggttaaacccttttttggaattatacaactcattattagagaaagctagtctcacccttacctta 22258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 12577841 - 12577932
Alignment:
Q  93 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||||||||||| ||||||||| |||| ||||| ||||||||||||||    
T  12577841 aacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaact-attattagagaaagttagtcccacccttaccttag 12577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 21676697 - 21676592
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||||||||| | | || ||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||  ||||||||| ||||||    
T  21676697 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattaga-gaagctagtcccaccct 21676600  T
Q  177 taccttag 184  Q
    ||||||||    
T  21676599 taccttag 21676592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 20022181 - 20022120
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaac 95  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  20022181 aattcatcagatt-tccactcttaaatcaaccaattacaacttctaaacctaattcccaaaac 20022120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 21678949 - 21678845
Alignment:
Q  78 aaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccctt 177  Q
    |||||||||| | | || ||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||  ||||||||| |||||||    
T  21678949 aaacctaattgctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattaga-gaagctagtcccaccctt 21678852  T
Q  178 accttag 184  Q
    |||||||    
T  21678851 accttag 21678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 21676585 - 21676499
Alignment:
Q  96 atcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||  ||||||||| ||||||||||||||    
T  21676585 atcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattaga-gaagctagtcccacccttaccttag 21676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 22483775 - 22483834
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttac 179  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  22483775 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 18023634 - 18023570
Alignment:
Q  105 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 169  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  18023634 atcaacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 18023570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 45469368 - 45469309
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  45469368 aattcatcaaatt-tctactcttaaatcaaccaattacaacttctaaacataattcccaaa 45469309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 21399706 - 21399770
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  21399706 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 21399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 21794199 - 21794263
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  21794199 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 21794263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 22345153 - 22345217
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| ||||| |||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  22345153 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttag 22345217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 22356813 - 22356877
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| ||||| |||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  22356813 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttag 22356877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 22610330 - 22610266
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||| ||||| ||||||||||||||    
T  22610330 gttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttaccttag 22610266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 31722642 - 31722583
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  31722642 aattcaacagatt-tctactcttaaatcaaccaattacaacttctaaaccaaatttccaaa 31722583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 38184990 - 38184926
Alignment:
Q  105 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 169  Q
    ||||| |||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  38184990 atcaataactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 38184926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 22474646 - 22474767
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-tatcaacaactacaa 118  Q
    ||||||| | ||||||||||||||||||||||||||    ||| |||||  |  ||| || ||||||||  | ||||||||||| ||| |||||||||||    
T  22474646 caattatcaacctaattcatcagattatctactctttcgacaatcaattttagtttcaaaccctaattct-acaacatcaaaacctattaacaactacaa 22474744  T
Q  119 ggttaaaccctttttcagaatta 141  Q
    |||||||||||||||||| ||||    
T  22474745 ggttaaaccctttttcaggatta 22474767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 22483914 - 22483976
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 169  Q
    ||||||| || | |||||||||||||| |||||||||||||||||||||||| |||| |||||    
T  22483914 caacaacaaccatgttaaaccctttttaagaattatacaactcattattagagaaagttagtc 22483976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 21579368 - 21579206
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-tatcaacaactacaa 118  Q
    ||||||| | ||||||||||| ||||||||||||||    ||| |||||  |  ||| || ||||||||  | ||||||||||| ||| |||||||||||    
T  21579368 caattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcgaaccctaattct-acaacatcaaaacatattaacaactacaa 21579270  T
Q  119 ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |||| |  ||| || |||| | || | |||||||||||||||||||    
T  21579269 ggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcacacccttacctta 21579206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 36305988 - 36306050
Alignment:
Q  121 ttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||| ||||||||||||| ||||||| | |||||||| |||||||||| ||||||||||||||    
T  36305988 ttaaaacctttttcagaatcatacaac-cgttattagagaaagctagtctcacccttaccttag 36306050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 12037326 - 12037205
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaa-ctatcaacaactacaa 118  Q
    ||||||||| ||||||||||| ||||||||||||||    ||| |||||  |  ||| || ||| ||||  | |||||||||| |||| |||||||||||    
T  12037326 caattattaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctgattct-acaacatcaaaagctattaacaactacaa 12037228  T
Q  119 ggttaaaccctttttcagaatta 141  Q
    |||||||||||||||||| ||||    
T  12037227 ggttaaaccctttttcaggatta 12037205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 22318046 - 22318000
Alignment:
Q  47 tctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| ||||| |||||||||||||||||||||||||| |||||||    
T  22318046 tctactattaaaccaaccaattacaacttctaaacctaaatcccaaa 22318000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 17906901 - 17906836
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 196  Q
    ||||||||| |||||||| |  |||||| |||| ||||| ||||||||||||||| ||||||||||    
T  17906901 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttaggttaatcgatcg 17906836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 29762958 - 29762909
Alignment:
Q  93 aacatcaaaact-atcaacaactacaaggttaaaccctttttcagaatta 141  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  29762958 aacatcaaaacttattaacaactacaaggttaaaccctttttcaggatta 29762909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 39694426 - 39694266
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaag--gttaaaccctt 130  Q
    |||||| |||||| |||||| |||   |||| ||||||||| ||||| |||||||||||||    |||||||| ||||  ||||||   |||||| ||      
T  39694426 aattcaacagattctctactattacgacaactaattacaacgtctaaccctaattcccaaattcccaaaacta-caac--ctacaacttgttaaatccag 39694330  T
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 194  Q
    ||||||||| |||||||| || |||||| |||||||||||| ||||||| ||||| || |||||    
T  39694329 tttcagaatcatacaacttataattagagaaagctagtcacgcccttacattaggttagtcgat 39694266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 18834412 - 18834474
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||| |||| ||||| ||||||  |||||||||| |||||||||| |||||||||||||    
T  18834412 gttaaacccctttt-agaatcatacaatccattattagagaaagctagtcccacccttacctta 18834474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 183
Target Start/End: Complemental strand, 20083760 - 20083638
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 159  Q
    ||||||||||||||||| ||||||||||||||||   ||| |||||  | | || || | | ||||| |  |||||||||||||||||| |  ||||||     
T  20083760 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac-atgctaaactcaatttcagaattatacaacttagaattagag 20083662  T
Q  160 aaagctagtcacacccttacctta 183  Q
    |||| ||||| |||||||||||||    
T  20083661 aaagttagtctcacccttacctta 20083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 22532281 - 22532222
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaa 92  Q
    |||||| || ||| |||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  22532281 aattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaa 22532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 22536966 - 22536907
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaa 92  Q
    |||||| || ||| |||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  22536966 aattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaa 22536907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 22966772 - 22966815
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  22966772 aacatcaaaacctattaacaactacaaggttaaaccctttttca 22966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 5082334 - 5082301
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  5082334 caaccaattacaacttcaaaacctaattcccaaa 5082301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 17978506 - 17978457
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||| ||||    
T  17978506 aacatcaaaacctattaacaactacaaggttaaatcctttttcaggatta 17978457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 19140695 - 19140728
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  19140695 caaccaattacaacttcaaaacctaattcccaaa 19140728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 41680223 - 41680174
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  41680223 aacatcaaaacctattaacaactacaaggttaaaccctttatcaggatta 41680174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 2827 - 2934
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  2827 taaacctaattcctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 2926  T
Q  177 taccttag 184  Q
    ||||||||    
T  2927 taccttag 2934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 1964 - 2073
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  1964 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacc 2063  T
Q  175 cttaccttag 184  Q
    ||||||||||    
T  2064 cttaccttag 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 186304 - 186195
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  186304 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacc 186205  T
Q  175 cttaccttag 184  Q
    ||||||||||    
T  186204 cttaccttag 186195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 16063697 - 16063804
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| ||||| ||||||    
T  16063697 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtcccaccct 16063796  T
Q  177 taccttag 184  Q
    ||||||||    
T  16063797 taccttag 16063804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 18744818 - 18744927
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||    
T  18744818 tctaaccctaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtcccacc 18744917  T
Q  175 cttaccttag 184  Q
    ||||||||||    
T  18744918 cttaccttag 18744927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 23199315 - 23199207
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | |||||||||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  23199315 tctaaccctaatttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtcccacc 23199216  T
Q  175 cttacctta 183  Q
    |||||||||    
T  23199215 cttacctta 23199207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 6551396 - 6551289
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||||||||||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||||    
T  6551396 taaacctaattcctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcaccct 6551297  T
Q  177 taccttag 184  Q
    ||||||||    
T  6551296 taccttag 6551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 660752 - 660842
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||| | |||||||||||||    
T  660752 aacatcaaaactaacaacaactacaaggttaaa-cctttttcagaattatacaaccccttattagagaaagctagtc-cccccttaccttagg 660842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 1627176 - 1627071
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttc-agaattatacaactcattattagataaagctagtcacac 173  Q
    ||||| ||||||| | | ||||||||||||| ||| || ||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||| |||    
T  1627176 tctaaccctaatttctataacatcaaaactaacaataaatacaagggtaaaccctttttttagaattatacaactcattattagagaaagctagtcccac 1627077  T
Q  174 ccttac 179  Q
    ||||||    
T  1627076 ccttac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 26762364 - 26762467
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 191  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| | || | || |||| | || | ||||| ||||||||||||||| |||||    
T  26762364 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacataa-ttatgattaaagaaggttagtcccacccttaccttaggttaatc 26762462  T
Q  192 gatcg 196  Q
    |||||    
T  26762463 gatcg 26762467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 32607379 - 32607315
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  32607379 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 32607315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 1627008 - 1626916
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| |  ||| || |||| | || | |||||||||||||||||||||    
T  1627008 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcacacccttaccttagg 1626916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 30138102 - 30138064
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaa 92  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  30138102 ttaaaacaaccaattacaacttctaaacctaattcccaa 30138064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 14025897 - 14025848
Alignment:
Q  93 aacatcaaaa-ctatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  14025897 aacatcaaaatctattaacaactacaaggttaaaccctttttcaggatta 14025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 17876133 - 17876166
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||||||||||||||||||||    
T  17876133 caaccaattacaacttctaaacctaattcccaaa 17876166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 26749993 - 26750085
Alignment:
Q  93 aacatcaaaact-atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    |||||||||||| || ||||||||||||||||||||| ||||||| ||||||  ||| || |||| | || | ||||| |||||||||||||||    
T  26749993 aacatcaaaacttattaacaactacaaggttaaaccccttttcaggattata-tacttatgattaaaaaaggttagtctcacccttaccttagg 26750085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 183
Target Start/End: Complemental strand, 36508761 - 36508633
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 153  Q
    ||||| |||||||||||||||||||||| |||||||||||    ||||||||  | | || ||   |||||| || |||||||||| |||||||| |  |    
T  36508761 ttaaaacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccac-ctgttaaatccattttcagaatcatacaacttagaa 36508663  T
Q  154 ttagataaagctagtcacacccttacctta 183  Q
    ||||| |||| ||||| |||||||||||||    
T  36508662 ttagagaaagttagtctcacccttacctta 36508633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 21914510 - 21914455
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggcagcccttcctctctgcttctcc 220  Q
    ||||| ||||||||||||||| ||||||||||||||||  |||||| || ||||||    
T  21914510 tagtcccacccttaccttaggttaatcgatcggcagcctctcctctttggttctcc 21914455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 24068191 - 24068234
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  24068191 aacatcaaaacctattaacaactacaaggttaaaccctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 31456884 - 31456923
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  31456884 ttaaaacaaccaattacaacttctaaacctaatttccaaa 31456923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 8833368 - 8833247
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-tatcaacaactacaa 118  Q
    ||||||| | ||||||||||||||||||||||||||    | | |||||  |  ||| || ||||||||  | ||||||||||| ||| |||||||| ||    
T  8833368 caattatcaacctaattcatcagattatctactctttctacgatcaattttagtttcaaaccctaattct-acaacatcaaaacctattaacaactataa 8833270  T
Q  119 ggttaaaccctttttcagaatta 141  Q
    |||||||||||||||||| ||||    
T  8833269 ggttaaaccctttttcaggatta 8833247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 21398697 - 21398643
Alignment:
Q  130 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||| ||||| ||||||| |||||||||| ||||||| || ||||||||||||||    
T  21398697 tttttagaatcatacaacccattattagagaaagctaatcccacccttaccttag 21398643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 20313253 - 20313328
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| || | |||||||||| ||||||||||||| ||| || |||||||  ||||||||| ||||||||||||||    
T  20313253 caacaacaaccatgttaaaccctatttcagaattata-aacccactattaga-gaagctagtcccacccttaccttag 20313328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 21300096 - 21300043
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  21300096 tttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttag 21300043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 21504102 - 21504147
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaa 138  Q
    |||||||||||||  |||||||||||  ||||||||||||||||||    
T  21504102 aacatcaaaactactaacaactacaaacttaaaccctttttcagaa 21504147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 18219 - 18329
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | || |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  18219 tctaaccctaatttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcacacc 18318  T
Q  175 cttaccttagg 185  Q
    |||||||||||    
T  18319 cttaccttagg 18329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 3512 - 3421
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  3512 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccacccttaccttag 3421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 21315566 - 21315475
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  21315566 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 21315475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 21335356 - 21335265
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  21335356 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 21335265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 23610570 - 23610680
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||| | ||||||||| ||||||||||| ||||||| ||||||||||| |||||||||| |||||||||| ||||    
T  23610570 tctaaccctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccacc 23610669  T
Q  175 cttaccttagg 185  Q
    |||||||||||    
T  23610670 cttaccttagg 23610680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 21369237 - 21369346
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | |||||||||||||  |  ||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||| ||||    
T  21369237 tctaaccctaatttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtcccacc 21369336  T
Q  175 cttaccttag 184  Q
    ||||||||||    
T  21369337 cttaccttag 21369346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 149668 - 149500
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaag 119  Q
    ||||||||||| ||||||||| ||||| ||||||||  | ||| |||||  || ||| || ||||||| | | ||||||||||||| ||| ||| ||||     
T  149668 caattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaactaacaa-aacgacaac 149570  T
Q  120 --gttaaaccc---tttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
      |||||||||   ||||| |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  149569 atgttaaaccccttttttttagaattatacaactcattattagagaaagctagttccacccttaccttag 149500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 3539753 - 3539799
Alignment:
Q  47 tctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  3539753 tctactcttaaatcaaccaattacaacttctaaacctaattctcaaa 3539799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 25584352 - 25584302
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 143  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  25584352 aacatcaaaactatcatcaacgacaaggttaaaccctttttcagaattata 25584302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 25142121 - 25142166
Alignment:
Q  48 ctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  25142121 ctactcttaattcaaccaattacaacttctaaacctaattcccaaa 25142166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 23801485 - 23801549
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  23801485 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 23801549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 19647199 - 19647246
Alignment:
Q  96 atcaaaactatcaacaactacaaggttaaaccctttttcagaattata 143  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  19647199 atcaaaactattaacaactacaagattaaaccctttttcagaattata 19647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 20006060 - 20005970
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||| ||| |||||| ||||  |||||||||||||||||||||||  |||||| |||| | || ||||||| ||||||||||||||    
T  20006060 aacatcaaaattattaacaacaacaaaattaaaccctttttcagaattata-gactcatgattaaagaaggctagtcccacccttaccttag 20005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 28652717 - 28652593
Alignment:
Q  16 acatcaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaacta 115  Q
    ||||||||||||||| ||||||||  ||||| ||||||||  | |||  || | |||  ||||| ||||||| | | ||||||||||||| |||||||||    
T  28652717 acatcaattattaccttaattcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaacta 28652620  T
Q  116 c-aaggttaaaccctttttcagaatta 141  Q
    | |||| ||||||||||||||||||||    
T  28652619 caaaggctaaaccctttttcagaatta 28652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 34491316 - 34491239
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcatta-ttagataaagctagtcacacccttaccttag 184  Q
    ||||||| || | |||||||||||||||||||||||||||||| ||| |||||  ||||||||| ||||||||||||||    
T  34491316 caacaacaaccatgttaaaccctttttcagaattatacaactcgttatttaga-gaagctagtcccacccttaccttag 34491239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 28345051 - 28344987
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||| | |||||||||| ||||||||||||||||||| |||||    
T  28345051 gttaaacccctttttagaatcatacagcccattattagagaaagctagtcacacccttatcttag 28344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 357805 - 357844
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  357805 ttaaaacaaccaattacaacttctaaacctaattcccaaa 357844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 1383671 - 1383632
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  1383671 ttaaaacaaccaattacaacttctaaacctaattcccaaa 1383632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 19201355 - 19201289
Alignment:
Q  27 taccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||| |||||| |||||| ||||||||   | ||||||||||||||||| ||||||||||||||||    
T  19201355 tacccaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 19201289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 24884400 - 24884433
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||||||||||||||||||||    
T  24884400 caaccaattacaacttctaaacctaattcccaaa 24884433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 27852570 - 27852630
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaat-tacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  27852570 aattcaacagatt-tctactcttaaatccaccaatctacaacttctaaatctaattcccaaa 27852630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 22251597 - 22251537
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| ||||||||   | ||||||||||||||||| ||||||||||||||||    
T  22251597 aattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 22251537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 24516116 - 24516239
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 159  Q
    ||||||||||||||||| ||||||||||||||||    || |||||  | | || || | ||||||| |  |||||||||||||||||| |  ||||||     
T  24516116 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac-atgttaaactcaatttcagaattatacaacttagaattagag 24516214  T
Q  160 aaagctagtcacacccttaccttag 184  Q
    |||| ||||| ||||||||||||||    
T  24516215 aaagttagtcccacccttaccttag 24516239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 45535899 - 45535978
Alignment:
Q  104 tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||| ||||| |||||||||||||||||||||||  |||| | |||| | || | ||||| ||||||||||||||    
T  45535899 tatcaacaacaacaagattaaaccctttttcagaattata-gactcgtgattaaagaaggttagtcccacccttaccttag 45535978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 5031251 - 5031218
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  5031251 caaccaattacaacttcaaaacctaattcccaaa 5031218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 9975859 - 9975892
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  9975859 caaccaattacaacttcaaaacctaattcccaaa 9975892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 17307416 - 17307449
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  17307416 caaccaattacaacttcaaaacctaattcccaaa 17307449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 17307486 - 17307539
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  17307486 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 17307539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 24780962 - 24780929
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  24780962 caaccaattacaacttcaaaacctaattcccaaa 24780929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 40912320 - 40912373
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  40912320 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 40912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 5031181 - 5031129
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  5031181 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 5031129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 24780892 - 24780840
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  24780892 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24780840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 16584 - 16418
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaac-caattacaacttctaaacctaattcc-caaaacatcaaaactatcaacaactaca 117  Q
    |||||||||||||||||||||| |||| ||||||||  | |||  |||||  ||  ||||| ||||||| | | || ||||||| ||| |||||||||||    
T  16584 caattattaccctaattcatcatattacctactctttcaacaaatcaattttaatctctaaccctaatttctctaatcatcaaacctaacaacaactaca 16485  T
Q  118 aggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| || || ||||||||||||||    
T  16484 aggttaaaccctttttcagaattatacaacccattattagataaagttaatctcacccttaccttag 16418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 18777 - 18700
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||| || || |||||| |||||||    
T  18777 caacaactacaaggctaaaccgtttttaagaattatacaactcattattagagaaagttaatcccaccctcaccttag 18700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 18945 - 18902
Alignment:
Q  95 catcaaaactatcaacaactacaaggttaaaccctttttcagaa 138  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||    
T  18945 catcaaaactatcaacaactacaaaattaaaccttttttcagaa 18902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 1036 - 1128
Alignment:
Q  91 aaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||    
T  1036 aaaacatcaaaactaacaacatctacaaggttaaaccctttttcagaattatacaatccattattagagaaagctagtctcacccttacctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 14674 - 14585
Alignment:
Q  95 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  14674 catcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 23732 - 23643
Alignment:
Q  95 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  23732 catcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 23643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 17611 - 17520
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||||    
T  17611 aacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgacccttaccttag 17520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 18048 - 17939
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  18048 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtcccacc 17949  T
Q  175 cttaccttag 184  Q
    ||||||||||    
T  17948 cttaccttag 17939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 4898 - 4988
Alignment:
Q  93 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  4898 aacatcaaaactaacaacaactacaaaggttaaacccttttacagaattatacaac-cattattagagaaagctagtcccacccttacctta 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 2287 - 2198
Alignment:
Q  96 atcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||| |||  ||||| |||||||||||||||    
T  2287 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttagg 2198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 5395 - 5303
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |  |||||| |||| ||||| |||||||||||||||    
T  5395 aacatcaaaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtcccacccttaccttagg 5303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 2564 - 2454
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaacccttttt--cagaattatacaactcattattagataaagctagtcaca 172  Q
    ||||| ||||||| | | |||||||||||||  ||| |||||||||||||||| |||||  |||||||||||||| |||||||||| |||||||||| ||    
T  2564 tctaaccctaatttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtccca 2465  T
Q  173 cccttacctta 183  Q
    |||||||||||    
T  2464 cccttacctta 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 19169 - 19260
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||||||| ||||    
T  19169 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttacgttag 19260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 19123 - 19160
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctt 130  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19123 aacatcaaaactatcaacaactacaaggttaaaccctt 19160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 5592 - 5685
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttt--tcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||||| ||| ||||||||||| |||||||||||||  ||||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  5592 aacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 15723 - 15615
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 174  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||  ||||||||||  ||| ||||| ||||    
T  15723 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattaga-gaagttagtcccacc 15625  T
Q  175 cttaccttag 184  Q
    ||||||||||    
T  15624 cttaccttag 15615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 6390 - 6471
Alignment:
Q  103 ctatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||| |||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||    
T  6390 ctataaacaactacaagattaatccctttttcagaattacacaactcattattagagaaagctagtcttacccttaccttag 6471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 61937 - 61847
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  61937 aacatcaaaactaacaacaactacaaggttaaatcc-ttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 61847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 68331 - 68376
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggcagcccttcctct 210  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||    
T  68331 tagtcccacccttaccttaagataatcgatcgacagcccttcctct 68376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 5445 - 5507
Alignment:
Q  122 taaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttag 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 11592 - 11668
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||| || | |||||||||||||||||||||||||||| |||| ||||| |||  ||||| |||||||| ||||    
T  11592 caacaacaacgatgttaaaccctttttcagaattatacaacccatttttagagaaatttagtcccacccttatctta 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 19845 - 19909
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| ||| ||||||  |||||||||||||    
T  19845 gttaaacccctttttagaatcatacaacccattattagagaaatctagtcctacccttaccttag 19909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 11320 - 11353
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  11320 caaccaattacaacttcaaaacctaattcccaaa 11353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 2223 - 2300
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||||    
T  2223 caacaacaactatgttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttag 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 748 - 669
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctct 210  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||| |||||||||||||| |||||||||||||||||||    
T  748 tttcagaattatacaacttagaattagagaaagttagtcccacccctaccttaggataattgatcggcagcccttcctct 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 38531 - 38441
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||  |||||| |||| | || | ||||||||||||||||||||    
T  38531 aacatcaaaactattaacaactacaaaattaaaccctttttcagaattata-tactcatgattaaagaaggttagtcacacccttaccttag 38441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 59761 - 59655
Alignment:
Q  77 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 176  Q
    ||||||||||| | | || ||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||| | || | ||| | ||||||    
T  59761 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctttttcagaattata-tactcatgattaaagaaggttagacccaccct 59663  T
Q  177 taccttag 184  Q
    ||||||||    
T  59662 taccttag 59655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 169051 - 168972
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctct 210  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||| |||||||||||||| |||||||||||||||||||    
T  169051 tttcagaattatacaacttagaattagagaaagttagtcccacccctaccttaggataattgatcggcagcccttcctct 168972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 174183 - 174286
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 191  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| |  ||| || |||| | || | ||||| ||||||||| ||||| |||||    
T  174183 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccacccttactttaggttaatc 174281  T
Q  192 gatcg 196  Q
    |||||    
T  174282 gatcg 174286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 143611 - 143663
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| |||||||||||||||||||    
T  143611 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 40253 - 40160
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaatta-taca-actcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||| || | |||||| |||||| || | ||||| ||||||||||||||    
T  40253 aacatcaaaactatcaacaactacatggttaaacccttttttagaattattatatactcatgattagagaaggttagtcccacccttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 23503 - 23587
Alignment:
Q  100 aaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||| |||||||| ||||||| ||||| |||| ||| ||||||||| |||||||||| ||||||||||  |||||||||||||    
T  23503 aaactaacaacaactgcaaggtttaacccctttttagatttatacaacccattattagagaaagctagtcctacccttaccttag 23587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 66148 - 66071
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||||| | ||| |||||| ||||||||||||||    
T  66148 caacaacaaccatgttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttag 66071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 111344 - 111425
Alignment:
Q  115 acaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 196  Q
    |||| ||||||||| |||| ||||| ||||||| |||||||||| |||||||| | ||||||||||||||  ||||||||||    
T  111344 acaatgttaaacccctttttagaatcatacaacccattattagagaaagctagccccacccttaccttagattaatcgatcg 111425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 73076 - 73139
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||| ||||| |||||||||||||    
T  73076 gttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttacctta 73139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 75926 - 75990
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| ||||||| || |||||||||| ||||||||||||||    
T  75926 gttaaacccctttttagaatcatacaacccattattggagaaagctagtcccacccttaccttag 75990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 328412 - 328379
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  328412 caaccaattacaacttcgaaacctaattcccaaa 328379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 359 - 423
Alignment:
Q  105 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 169  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  359 atcaacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 3167 - 3257
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  3167 aacatcaaaactatcaacaactacaaaattaaaccctttttcataattata-tactcatgattaaagaaggttagtcccacccttaccttag 3257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 8731 - 8897
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaa--caactaca 117  Q
    ||||||||||| ||||||||| ||||| ||||||||  | ||| |||||  || ||| |||||||||| |  ||| ||||||| || |||  |||| |||    
T  8731 caattattaccttaattcatctgattacctactctttcaacaatcaattttaatttcaaaacctaatttctcaaaaatcaaaattaacaaaacaacaaca 8830  T
Q  118 aggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
     | | || ||| |||||||||| ||||||  ||||||||||||||||||||| |||||||| |||||    
T  8831 tgttaaacccccttttcagaatcatacaatccattattagataaagctagtcccacccttaacttag 8897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 26689 - 26776
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacc 180  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||  |  |||||| |||| || || ||||||||||    
T  26689 aacatcaaagctaacaacaactacaaagttaaaccctttttcagaattatacaacctaaaattagagaaagttaatcccacccttacc 26776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 23576 - 23666
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||| |||||||||||  ||||||||||||| |||||||||  |||||| |||| | || |  |||| ||||||||||||||    
T  23576 aacatcaaaactattaacaactacaaaattaaacccttttttagaattata-tactcatgattaaagaaggtcagtcccacccttaccttag 23666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 35262 - 35185
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| || | |||||||||||||| ||||||||||||| |||||||||  |||||||||  ||||||||||||||    
T  35262 caacaacaaccatgttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttaccttag 35185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 10570 - 10633
Alignment:
Q  105 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 169  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  10570 atcaacaactacaatgttaaaccctttttcagaattatacaac-catctttagagaaagctagtc 10633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 22519 - 22463
Alignment:
Q  163 gctagtcacacccttaccttaggataatcgatcggcagcccttcctctctgcttctc 219  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||| || |||||    
T  22519 gctagtctcacccttaccttagaataatcgatcggcagcccttcctctttggttctc 22463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 7603 - 7513
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||| |||  |||||| |||| | || | ||||| ||||||||||||||    
T  7603 aacatcaaaactatcaacaactataaaattaaaccctttttcagaatcata-tactcataattaaagaaggttagtcccacccttaccttag 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 20235 - 20174
Alignment:
Q  32 taattcatcagattatctactcttaaatcaaccaa-ttacaacttctaaacctaattcccaaa 93  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  20235 taattcaacagatt-tctactcttaaatcaaccaaattacaacttctaaacataattcccaaa 20174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 117941 - 117889
Alignment:
Q  41 agattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaa 94  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  117941 agattttctactgttaaa-caaccaattacaacttctaaacctaattcccaaaa 117889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 113116 - 113057
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| || ||| |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  113116 aattcaacaaattttctactgttaaa-caaccaattacaacttctaaacctaattcccaaa 113057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 81501 - 81530
Alignment:
Q  64 caattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||||||||||||||||    
T  81501 caattacaacttctaaacctaattcccaaa 81530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 1207 - 1148
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||||| ||||| |||||||    
T  1207 aattcaacagatt-tctactcttaaatcaactaattacaacttctaaccctaaatcccaaa 1148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 10536 - 10433
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 191  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||| |||| |  ||| || |||| | || | ||||| ||||||||||||||| |||||    
T  10536 aacatcaaaacctattaacaactacaatgttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccacccttaccttaggttaatc 10438  T
Q  192 gatcg 196  Q
    |||||    
T  10437 gatcg 10433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 127406 - 127342
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||  |||||||||| |||||||||| ||||||||||||||    
T  127406 gttaaacccctttttagaatcatacaatccattattagagaaagctagtcccacccttaccttag 127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 108208 - 108255
Alignment:
Q  47 tctactcttaaatcaaccaattac-aacttctaaacctaattcccaaa 93  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||    
T  108208 tctactcttaaatcaaccaatttccaacttctaaacctaattcccaaa 108255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 10937 - 10999
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||| ||||| ||||||| |||||||||| |||||||||  |||||||||||||    
T  10937 gttaaacccttttt-agaatcatacaacccattattagagaaagctagttccacccttacctta 10999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 28513 - 28564
Alignment:
Q  93 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattata 143  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  28513 aacataaaaactaacaacaactacaaaggttaaaccctttttcagaattata 28564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 17075 - 17118
Alignment:
Q  100 aaactatcaacaactacaaggttaaaccctttttcagaattata 143  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    
T  17075 aaactatcaacaactacaaagttaaaccctttttaagaattata 17118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 26606 - 26649
Alignment:
Q  100 aaactatcaacaactacaaggttaaaccctttttcagaattata 143  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    
T  26606 aaactatcaacaactacaaagttaaaccctttttaagaattata 26649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 2160 - 2110
Alignment:
Q  43 attatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||| ||||| ||||| |||||||||||||||| |||||||||||||||||    
T  2160 attagctactattaaaccaaccaattacaacttataaacctaattcccaaa 2110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 8811 - 8745
Alignment:
Q  118 aggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||| ||||| |||| ||||| ||||||| ||||||||||  ||||||||| ||||||||||||||    
T  8811 aggttcaacccctttttagaatcatacaacccattattagagtaagctagtctcacccttaccttag 8745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 28664 - 28726
Alignment:
Q  81 cctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 143  Q
    ||||||||| | ||||  |||||||| |||||||||||| |||||| ||||||||||||||||    
T  28664 cctaattcctataacaataaaactattaacaactacaagattaaacgctttttcagaattata 28726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 8545 - 8598
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaatt 87  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||| |||||||    
T  8545 aattcaacagatt-tctactattaaatcaaccaattacaacttctaaccctaatt 8598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 23990 - 23932
Alignment:
Q  75 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaacccttttt 133  Q
    ||||| ||||||| | | |||||||||||||  ||||||||||||||||||||||||||    
T  23990 tctaaccctaatttctataacatcaaaactaataacaactacaaggttaaacccttttt 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 307 - 356
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  307 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 68 - 191
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 159  Q
    ||||||||||||||||| ||||||||||||||||    || |||||  | | || || | ||||||| |  |||||||||||||||||| |  ||||||     
T  68 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac-atgttaaactcaatttcagaattatacaacttagaattagag 166  T
Q  160 aaagctagtcacacccttaccttag 184  Q
    |||| ||||| ||||||||||||||    
T  167 aaagttagtcccacccttaccttag 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 20092 - 20199
Alignment:
Q  23 ttattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-tatcaacaactacaaggt 121  Q
    |||||| ||||||||||| ||||||||| ||||    ||| |||||  || ||| || ||||||||  ||||||||||||| ||| ||||||||||||||    
T  20092 ttattaacctaattcatcggattatctattctttctacaatcaattttaatttcaaaccctaattct-aaaacatcaaaacctattaacaactacaaggt 20190  T
Q  122 taaaccctt 130  Q
    |||||||||    
T  20191 taaaccctt 20199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 40096 - 40160
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||| ||||| || |||||||||||    
T  40096 gttaaacccctttttagaatcatacaacccattattagagaaagttagtcgcatccttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 10894 - 10842
Alignment:
Q  41 agattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||| |||||| ||| | |||||||||||||||||||| |||||||||||||    
T  10894 agattctctactattacaacaaccaattacaacttctaaccctaattcccaaa 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 5156 - 5124
Alignment:
Q  61 aaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||||| |||||||||||||    
T  5156 aaccaattacaacttctaaccctaattcccaaa 5124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 68789 - 68725
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||| |||| ||||| ||| ||| |||||||||| |||| ||||| ||||||||||||||    
T  68789 gttaaacccgtttttagaatcatataacccattattagagaaaggtagtcccacccttaccttag 68725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 43848 - 43786
Alignment:
Q  120 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||| ||||||||||||| ||| |||||||||| || ||||||| ||||||||||||||    
T  43848 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtcccacccttaccttag 43786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 31994 - 32046
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| |||||||||||||||||||    
T  31994 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 32046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 37301 - 37353
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| |||||||||||||||||||    
T  37301 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 37353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 31924 - 31957
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  31924 caaccaattacaacttcaaaacctaattcccaaa 31957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 37231 - 37264
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  37231 caaccaattacaacttcaaaacctaattcccaaa 37264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 77687 - 77740
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  77687 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 77740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 499092 - 499129
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggcagcc 202  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  499092 tagtcccacccttaccttaggataatcgattggcagcc 499129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 570 - 660
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||| |||||||||| ||||  ||||||| ||||| ||||||||| | ||||| |||| | || | ||||| ||||||||||||||    
T  570 aacatcaaaattatcaacaacaacaaaattaaaccatttttaagaattataga-ctcatgattaaagaaggttagtcccacccttaccttag 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 89
Target Start/End: Complemental strand, 6813 - 6778
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcc 89  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6813 ttaaaacaaccaattacaacttctaaacctaattcc 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 31892 - 31982
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||| |||  |||||| |||| | |  | ||||| ||||||||||||||    
T  31892 aacatcaaaactattaacaactataaaattaaaccctttttcagaatcata-tactcatgattaaagatggttagtctcacccttaccttag 31982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 16528 - 16567
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  16528 ttaaaacaaccaattacaacttctaaacctaattgccaaa 16567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 21535 - 21574
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  21535 ttaaaacaaccaattacaacttctaaacataattcccaaa 21574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 29695 - 29662
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  29695 caaccaattacaacttcaaaacctaattcccaaa 29662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 8086 - 8129
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  8086 aacatcaaaacctattaacaactacaaggttaaaccctttttca 8129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 29273 - 29316
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  29273 aacatcaaaacctattaacaactacaaggttaaaccctttttca 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 49692 - 49782
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||||||||||||||||  | ||  ||||||||||||||||||||||   |||||| |||| | || | ||||| ||||||||||||||    
T  49692 aacatcaaaactatcaacaaaaataaaattaaaccctttttcagaattat-ggactcatgattaaagaaggttagtcccacccttaccttag 49782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 106179 - 106140
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  106179 ttaaaacaaccaattacaacgtctaaacctaattcccaaa 106140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 1279 - 1313
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaacc 127  Q
    ||||||||||||||||||||||| |||||||||||    
T  1279 aacatcaaaactatcaacaactataaggttaaacc 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 6785 - 6819
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaacc 127  Q
    ||||||||||||||||||||||| |||||||||||    
T  6785 aacatcaaaactatcaacaactataaggttaaacc 6819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 161 - 199
Alignment:
Q  54 ttaaatcaaccaattacaacttctaaacctaattcccaa 92  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  161 ttaaaacaaccaattacaacttctaaacctaatttccaa 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 10780 - 10747
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggc 198  Q
    ||||| ||||||||||||||||||||||||||||    
T  10780 tagtcccacccttaccttaggataatcgatcggc 10747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 62608 - 62729
Alignment:
Q  20 caattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-tatcaacaactacaa 118  Q
    ||||||| | ||||||||||| ||||||||||||||    ||| |||||  |  ||| || ||||||||  | ||||||||||| ||| |||||| ||||    
T  62608 caattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattct-acaacatcaaaacctattaacaaccacaa 62706  T
Q  119 ggttaaaccctttttcagaatta 141  Q
    |||||||||||||||||| ||||    
T  62707 ggttaaaccctttttcaggatta 62729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 90 - 135
Alignment:
Q  93 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaa 138  Q
    |||||||||||||| |||||||||||  | ||||||||||||||||    
T  90 aacatcaaaactattaacaactacaaattaaaaccctttttcagaa 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 1135 - 1168
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  1135 caaccaattacaacttcaaaacctaattcccaaa 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 1205 - 1257
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  1205 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 1257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 590 - 557
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  590 caaccaattacaacttcaaaacctaattcccaaa 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 520 - 468
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  520 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 4836 - 4803
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  4836 caaccaattacaacttcaaaacctaattcccaaa 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 1095 - 1128
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  1095 caaccaattacaacttcaaaacctaattcccaaa 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 1165 - 1218
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||  |||| ||||||||||||||||||||    
T  1165 tttcagaattatacaacttagaattaggaaaagttagtcacacccttaccttag 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 9025 - 9074
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 141  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||| ||||    
T  9025 aacatcaaaacctattaacaactacaagattaaaccctttttcaggatta 9074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 4383 - 4475
Alignment:
Q  93 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 185  Q
    ||||||||||| ||| |||||||||||||||||||| |||||| | ||||||  ||| || |||| | || | ||||| |||||||||||||||    
T  4383 aacatcaaaacctattaacaactacaaggttaaaccttttttcgggattata-tacttatgattaaagaaggttagtcccacccttaccttagg 4475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 6509 - 6468
Alignment:
Q  93 aacatcaaaactatcaacaactac-aaggttaaacccttttt 133  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  6509 aacatcaaaactaacaacaactacaaaggttaaacccttttt 6468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 2494 - 2527
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  2494 caaccaattacaacttcaaaacctaattcccaaa 2527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 3112 - 3145
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  3112 caaccaattacaacttcaaaacctaattcccaaa 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 5690 - 5615
Alignment:
Q  107 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    ||||||| || | |||||| ||| ||||||||||||| ||| |||||||||| || ||||||| ||||||||||||||    
T  5690 caacaacaaccatgttaaatcctatttcagaattata-aacccattattagagaa-gctagtcccacccttaccttag 5615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 35490 - 35543
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 184  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  35490 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 35543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 12655 - 12622
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  12655 caaccaattacaacttcaaaacctaattcccaaa 12622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 21915 - 21882
Alignment:
Q  60 caaccaattacaacttctaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  21915 caaccaattacaacttcaaaacctaattcccaaa 21882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 55975 - 56012
Alignment:
Q  165 tagtcacacccttaccttaggataatcgatcggcagcc 202  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  55975 tagtctcacccttaccttaggataatcgattggcagcc 56012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 4586 - 4645
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| || ||| ||||| |||| |||||||||||||||||||||||| ||||    
T  4586 aattcaacagattttc-actattaaaccaactaattacaacttctaaacctaattctcaaa 4645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 79049 - 79101
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  79049 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 79101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 78237 - 78185
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  78237 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 78185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 3177 - 3145
Alignment:
Q  57 aatcaaccaattacaacttctaaacctaattcc 89  Q
    ||||||||||||||||||||||| |||||||||    
T  3177 aatcaaccaattacaacttctaaccctaattcc 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 24183 - 24131
Alignment:
Q  131 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 183  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  24183 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 135652 - 135593
Alignment:
Q  33 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 93  Q
    |||||| |||||| |||||| |||||| |||||||| ||||||||||  ||||||||||||    
T  135652 aattcaacagatt-tctactattaaattaaccaatttcaacttctaactctaattcccaaa 135593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University