View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12511_low_6 (Length: 400)
Name: NF12511_low_6
Description: NF12511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12511_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 378
Target Start/End: Original strand, 32265531 - 32265908
Alignment:
| Q |
1 |
aattggctcattgcctatggtctgaaacagatataaaccatgttagagagagtgcaaccattgttgcaaagctggttggtacagttgagcctgatcaggc |
100 |
Q |
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| T |
32265531 |
aattggctcatcgcctatggtctgaaacagatataaaccatgttagagagagtgcaaccattgttgcaaagctggttggtacagttgagcctgatcaggc |
32265630 |
T |
|
| Q |
101 |
tttcaaggagatgtttggcctcaactttgcaccacgacgcagaagaaagaagtcgttcggttggacgtccagtatgaagcatatcttgtgaaggtgattg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32265631 |
tttcaaggagatgtttggcctcaactttgcaccacgacgcagaagaaagaagtcgttcggttggacgtccagtatgaagcatatcttgtgaaggtgattg |
32265730 |
T |
|
| Q |
201 |
tgttggaacaagattactgtataggaagtttgattgggccatgtaaaaatttcccctggctccattttaacataggaaaaatatgtcatccccccttcta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32265731 |
tgttggaacaagattactgtataggaagtttgattgggccatgtaaaaatttcccctggctccattttaacataggaaaaatatgtcatccccccttcta |
32265830 |
T |
|
| Q |
301 |
ttaacaatctgatctttactatatgtttctgactctaattcctatttgactgtaaagaggttgaaggatgcagaacca |
378 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32265831 |
ttagcaatctgatctttactatatgtttctgactctaattcctatttgactgtaaagaggttgaaggatgcagaacca |
32265908 |
T |
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