View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12513_high_2 (Length: 601)

Name: NF12513_high_2
Description: NF12513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12513_high_2
NF12513_high_2
[»] chr6 (11 HSPs)
chr6 (252-582)||(27878709-27879040)
chr6 (251-546)||(1234725-1235019)
chr6 (252-546)||(26976131-26976424)
chr6 (252-546)||(27873990-27874283)
chr6 (252-528)||(30986552-30986829)
chr6 (252-544)||(18967912-18968194)
chr6 (298-541)||(30966683-30966923)
chr6 (265-442)||(21966677-21966852)
chr6 (17-126)||(29736614-29736723)
chr6 (251-399)||(23012499-23012647)
chr6 (252-303)||(30967674-30967725)
[»] chr3 (11 HSPs)
chr3 (252-582)||(54545870-54546200)
chr3 (252-546)||(5823275-5823568)
chr3 (252-546)||(5818513-5818806)
chr3 (252-473)||(2817263-2817486)
chr3 (252-402)||(24659136-24659285)
chr3 (262-365)||(4579254-4579358)
chr3 (266-421)||(31204781-31204936)
chr3 (290-446)||(35977103-35977258)
chr3 (404-544)||(24671173-24671301)
chr3 (493-544)||(4579126-4579177)
chr3 (266-354)||(36420132-36420220)
[»] chr4 (15 HSPs)
chr4 (252-582)||(30945477-30945807)
chr4 (252-584)||(30950183-30950515)
chr4 (252-546)||(48701821-48702114)
chr4 (252-546)||(42265927-42266220)
chr4 (252-546)||(42270646-42270939)
chr4 (262-546)||(24520035-24520318)
chr4 (251-546)||(48697130-48697425)
chr4 (252-544)||(10427315-10427597)
chr4 (265-459)||(48782850-48783031)
chr4 (305-406)||(17248011-17248112)
chr4 (359-483)||(1979269-1979391)
chr4 (318-355)||(1979567-1979604)
chr4 (263-336)||(30165895-30165968)
chr4 (254-335)||(36615361-36615442)
chr4 (149-209)||(44562748-44562808)
[»] chr5 (5 HSPs)
chr5 (245-546)||(34359980-34360280)
chr5 (252-550)||(29585300-29585597)
chr5 (252-546)||(41718434-41718727)
chr5 (252-546)||(41723160-41723453)
chr5 (271-546)||(34352272-34352546)
[»] chr8 (3 HSPs)
chr8 (252-546)||(9439372-9439665)
chr8 (252-546)||(9444092-9444385)
chr8 (269-325)||(4799315-4799371)
[»] chr2 (16 HSPs)
chr2 (262-546)||(5198665-5198948)
chr2 (17-251)||(25287861-25288095)
chr2 (263-542)||(15602905-15603183)
chr2 (252-414)||(825632-825796)
chr2 (262-520)||(28715816-28716067)
chr2 (251-414)||(830288-830453)
chr2 (464-579)||(830176-830291)
chr2 (464-579)||(825520-825635)
chr2 (262-544)||(30396921-30397191)
chr2 (321-471)||(13843865-13844014)
chr2 (252-396)||(31592910-31593053)
chr2 (252-473)||(13840240-13840456)
chr2 (346-479)||(8004161-8004292)
chr2 (272-364)||(12175768-12175860)
chr2 (313-364)||(42117825-42117876)
chr2 (267-316)||(9358158-9358207)
[»] chr7 (7 HSPs)
chr7 (252-582)||(30235006-30235339)
chr7 (257-544)||(16183636-16183913)
chr7 (252-473)||(8139964-8140183)
chr7 (252-437)||(8138460-8138645)
chr7 (17-124)||(34813925-34814032)
chr7 (250-366)||(36528413-36528529)
chr7 (265-409)||(5102606-5102749)
[»] scaffold0074 (1 HSPs)
scaffold0074 (252-544)||(27226-27508)
[»] chr1 (4 HSPs)
chr1 (247-544)||(46191266-46191551)
chr1 (263-437)||(30697126-30697300)
chr1 (264-481)||(4130173-4130389)
chr1 (263-355)||(364683-364775)


Alignment Details
Target: chr6 (Bit Score: 304; Significance: 1e-171; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 252 - 582
Target Start/End: Original strand, 27878709 - 27879040
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27878709 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 27878808  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  27878809 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact 27878908  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattcta 550  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27878909 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattcta 27879008  T
Q  551 ctaagaacaagtagttgttgtgttactttgtt 582  Q
    ||||||||||||||||||||||||||||||||    
T  27879009 ctaagaacaagtagttgttgtgttactttgtt 27879040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 251 - 546
Target Start/End: Complemental strand, 1235019 - 1234725
Alignment:
Q  251 ttgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaac 349  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1235019 ttgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac 1234920  T
Q  350 aaataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccac 449  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  1234919 aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac 1234820  T
Q  450 tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    |||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  1234819 tctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 1234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 252 - 546
Target Start/End: Original strand, 26976131 - 26976424
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26976131 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 26976230  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26976231 aataaggggaaaaaaccaaggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact 26976330  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  26976331 ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 26976424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 252 - 546
Target Start/End: Original strand, 27873990 - 27874283
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27873990 tgttaggtaccagagtaacaaaatattatcacgcatctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 27874089  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  27874090 aataaagggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact 27874189  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    |||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||||    
T  27874190 ctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcactat 27874283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 252 - 528
Target Start/End: Complemental strand, 30986829 - 30986552
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaa---cccctcaa 348  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||    
T  30986829 tgttaggtatcagagtaacaaaatattatcacgtagctaaaataagagacgagaaaagaggaactgaacgcacaatatttacgtggaaagtacccctcaa 30986730  T
Q  349 caaataaggggaaaaaa--ccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattac 446  Q
    |||||||||  ||||||  |||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||||||    
T  30986729 caaataaggaaaaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattgcaggacctctctctaaatgcaaggagagtacaattac 30986630  T
Q  447 cactctctcttataaataggagaatacaaacactaacactacctaggagaaacctca-caggagaaactaatt-tttctctcta 528  Q
    ||||||||||| ||||||| |||||      ||| ||||||||||||||||||||||  ||||||||||| || ||||||||||    
T  30986629 cactctctcttgtaaatagaagaat------actgacactacctaggagaaacctcatgaggagaaactatttctttctctcta 30986552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 252 - 544
Target Start/End: Complemental strand, 18968194 - 18967912
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  18968194 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaatacataatattttacgtggaaacccctcaaca 18968095  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaa-aaaattacaggacctctctctaactacaaggagagtacaattaccac 449  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||| | ||||||| ||| ||||||||| |||||||||||   ||||| | |    
T  18968094 aataaggggaaaaaaccacggggcaagagtagaaaactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattagc-c 18967996  T
Q  450 tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact 544  Q
    |||||| |  |||||||||||||| ||||          ||||||||||||||||| |||||||||  ||| |||| ||||||||||||||||||    
T  18967995 tctctcat-gaaataggagaatactaaca----------ctaggagaaacctcacaagagaaactatatttcctctttatatttttcctctcact 18967912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 298 - 541
Target Start/End: Complemental strand, 30966923 - 30966683
Alignment:
Q  298 agacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggtaagagtagagaactttcactaa 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||| ||||||| ||||||||||||||||||||||    
T  30966923 agacgagaaaagaggaactgaacacacaatatttacgtggaaacccatcaacaaataagggaaataaaatcacggggcaagagtagagaactttcactaa 30966824  T
Q  397 gtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatacaaacactaacactacctaggaga 496  Q
    |||||| ||||| ||| |||||||||||| | ||||||||||||||||||||||||||||| ||||||| |||||      ||| |  ||||||||||||    
T  30966823 gtggaagaaattgcagaacctctctctaaatgcaaggagagtacaattaccactctctcttgtaaatagaagaat------actgaggctacctaggaga 30966730  T
Q  497 aacctcac-aggagaaactaatt-tttctctctatatttttcctctc 541  Q
    |||||||| || |||||||| || ||||||||||||||||| |||||    
T  30966729 aacctcacaagtagaaactatttctttctctctatattttttctctc 30966683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 21966852 - 21966677
Alignment:
Q  265 agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaaaaa 364  Q
    |||||| ||| ||||||||||||||||| ||| | | ||||||||||||||| |||| | |||||||| ||||||||||||||| |||||| ||||||||    
T  21966852 agtaacgaaacattatcacgcagctaaa-taacatatgagaaaagaggaactaaacataaaatatttatgtggaaacccctcaataaataaagggaaaaa 21966754  T
Q  365 accacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaa 442  Q
     | | |||| |||||||||||||||||||||| ||||| |||||| | ||||||||||||| | ||| ||||||||||    
T  21966753 tc-atggggcaagagtagagaactttcactaaatggaagaaattataagacctctctctaatttcaaagagagtacaa 21966677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 29736723 - 29736614
Alignment:
Q  17 cactgctctagtactctcgacttcggcacaagcaaaagacttctcttgattaaccaaccttttagcatattcagaagcctatagaacaaaaatggaatca 116  Q
    ||||||||||| | |||||| |||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||    
T  29736723 cactgctctagcattctcgatttcggcacaagcaaaagactgctcttgattaaccaactttttagcatcttcagaagcctatagcacaaagatggaatca 29736624  T
Q  117 aatttctttt 126  Q
     |||||||||    
T  29736623 catttctttt 29736614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 251 - 399
Target Start/End: Original strand, 23012499 - 23012647
Alignment:
Q  251 ttgttaggtaacagagtaacaaaa-tattatcacgcagctaaaataagagacgag-aaaagaggaactgaacacacaatatttacgtggaaacccctcaa 348  Q
    ||||| ||||||| ||||| |||| |||||||||||| ||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| | || |    
T  23012499 ttgttgggtaacaaagtaaaaaaaatattatcacgcaactaaaataagagacgagaaaaagaagaattgaacacacattatttacgtggaaactcgtc-a 23012597  T
Q  349 caaataaggggaaaaaaccacggggtaagagtagagaactttcactaagtg 399  Q
    ||||| | ||| ||||||||  ||| |||||||||||||||||||||||||    
T  23012598 caaattaaggggaaaaacca-tgggcaagagtagagaactttcactaagtg 23012647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 252 - 303
Target Start/End: Complemental strand, 30967725 - 30967674
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacga 303  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  30967725 tgttaggtaccagagtaacaaaatattatcaagcagctaaaataagagacga 30967674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 303; Significance: 1e-170; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 252 - 582
Target Start/End: Complemental strand, 54546200 - 54545870
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaa 351  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  54546200 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagatgagaaaagaggaactgaacatacaatatttacgtggaaacccctcaacaa 54546101  T
Q  352 ataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactc 451  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54546100 ataaggggaaaaaaccacggggctagagtagagaactttcactaagtggatgaaattacaggacctctctctaactacaaggagagtacaattaccactc 54546001  T
Q  452 tctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattctac 551  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54546000 tctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattctac 54545901  T
Q  552 taagaacaagtagttgttgtgttactttgtt 582  Q
    |||||||||||||||||||||||||||||||    
T  54545900 taagaacaagtagttgttgtgttactttgtt 54545870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 252 - 546
Target Start/End: Original strand, 5823275 - 5823568
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5823275 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 5823374  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5823375 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact 5823474  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  5823475 ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 5823568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 252 - 546
Target Start/End: Original strand, 5818513 - 5818806
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  5818513 tgttaggtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaact 5818612  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5818613 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact 5818712  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  5818713 ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 5818806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 252 - 473
Target Start/End: Original strand, 2817263 - 2817486
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaaca 350  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2817263 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 2817362  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattacca-- 448  Q
    ||||| ||||||||||||| ||| ||||||| |||||| ||||||||||||| |||||||| || |||||||||| ||||||||||||||||| ||||      
T  2817363 aataa-gggaaaaaaccacagggcaagagtaaagaactctcactaagtggaagaaattacaagaactctctctaaatacaaggagagtacaatcaccact 2817461  T
Q  449 ctctctcttataaataggagaatac 473  Q
    |||||||||||||||||||||||||    
T  2817462 ctctctcttataaataggagaatac 2817486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 252 - 402
Target Start/End: Original strand, 24659136 - 24659285
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaaca 350  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  24659136 tgttaggtaccagagtaataaaatattatcacacagctaaaataagagatgagaaaagaggaactgaacacacaacattttacgtggaaacccctcaaca 24659235  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaa 402  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||||||    
T  24659236 aataaggggaaaaaaccacggggcaagagt--agaactttcactaagtggaa 24659285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 4579358 - 4579254
Alignment:
Q  262 cagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaacaaataagggga 360  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4579358 cagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggga 4579259  T
Q  361 aaaaa 365  Q
    |||||    
T  4579258 aaaaa 4579254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 266 - 421
Target Start/End: Original strand, 31204781 - 31204936
Alignment:
Q  266 gtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaaaaaa 365  Q
    |||||||||||||| ||||||| ||||| |||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  31204781 gtaacaaaatattagcacgcagttaaaagaagagatga-aaaagaggaactgaactcacaatatttacgtggaaacccctcaacaaataagaggaaaaaa 31204879  T
Q  366 ccacgg-ggtaagagtagagaactttcactaagtggaaaaaattacaggacctctct 421  Q
     ||||| || || ||||||||||||||||||||||| ||||||||||  ||||||||    
T  31204880 tcacggaggcaatagtagagaactttcactaagtgggaaaaattacaaaacctctct 31204936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 290 - 446
Target Start/End: Complemental strand, 35977258 - 35977103
Alignment:
Q  290 aaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaaaaaaccacggggtaagagtaga-gaact 388  Q
    ||||||||||  |||||||||| || |||||| |||||||||||||  ||| || |||||| |||  ||||||||  |||  || ||||||| | ||  |    
T  35977258 aaaataagaggtgagaaaagagaaattgaacaaacaatatttacgtaaaaaaccatcaacatata--gggaaaaactcacttggcaagagtaaaagagtt 35977161  T
Q  389 ttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattac 446  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||    
T  35977160 ttcactaagtggaaaaaattacaagacttctctctaaatacaaggagagaacaattac 35977103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 404 - 544
Target Start/End: Original strand, 24671173 - 24671301
Alignment:
Q  404 aaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatacaaacactaacactacctaggagaaacctca 503  Q
    |||||||| ||| ||||||||| |||||||||||   ||||||| |||||||||  |||||||||||||| |||||||          ||||||||||||    
T  24671173 aaattacaagacttctctctaaatacaaggagagacaaattacc-ctctctcttg-aaataggagaatactaacacta----------ggagaaacctca 24671260  T
Q  504 caggagaaactaatttttctctctatatttttcctctcact 544  Q
    ||||||||||||  ||| |||||||||||||||||||||||    
T  24671261 caggagaaactatatttcctctctatatttttcctctcact 24671301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 4579177 - 4579126
Alignment:
Q  493 gagaaacctcacaggagaaactaatttttctctctatatttttcctctcact 544  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  4579177 gagaaacctcacaggagaaactatatttcctctctatatttttcctctcact 4579126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 354
Target Start/End: Complemental strand, 36420220 - 36420132
Alignment:
Q  266 gtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaata 354  Q
    ||||||||||||||||| | || ||||||| |||| ||||||| | ||||   ||||| |||||||||||||||| |  ||||||||||    
T  36420220 gtaacaaaatattatcatgtagttaaaatatgagatgagaaaaaaagaacaacacacataatatttacgtggaaatctttcaacaaata 36420132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 284; Significance: 1e-159; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 252 - 582
Target Start/End: Original strand, 30945477 - 30945807
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30945477 tgttaggtatcagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 30945576  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  30945577 aataaggg-aaaaaatcacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggagagtacaattaccact 30945675  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattcta 550  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30945676 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattcta 30945775  T
Q  551 ctaagaacaagtagttgttgtgttactttgtt 582  Q
    ||||||||||||||||||||||||||||||||    
T  30945776 ctaagaacaagtagttgttgtgttactttgtt 30945807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 252 - 584
Target Start/End: Original strand, 30950183 - 30950515
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30950183 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagataagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 30950282  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||    
T  30950283 aataaggg-aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggaaagtacaattaccact 30950381  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattcta 550  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30950382 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattcta 30950481  T
Q  551 ctaagaacaagtagttgttgtgttactttgttat 584  Q
    ||||||||||||||||||||||||||||||||||    
T  30950482 ctaagaacaagtagttgttgtgttactttgttat 30950515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 252 - 546
Target Start/End: Original strand, 48701821 - 48702114
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  48701821 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 48701920  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  48701921 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact 48702020  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  48702021 ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 48702114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 252 - 546
Target Start/End: Complemental strand, 42266220 - 42265927
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42266220 tgttagataccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 42266121  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  42266120 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact 42266021  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    |||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||||    
T  42266020 ctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcactat 42265927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 252 - 546
Target Start/End: Complemental strand, 42270939 - 42270646
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42270939 tgttagataccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 42270840  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  42270839 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact 42270740  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    |||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||||    
T  42270739 ctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcactat 42270646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 262 - 546
Target Start/End: Original strand, 24520035 - 24520318
Alignment:
Q  262 cagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaacaaataagggga 360  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24520035 cagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggga 24520134  T
Q  361 aaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttata 460  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24520135 aaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttata 24520234  T
Q  461 aataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  24520235 aataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 24520318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 251 - 546
Target Start/End: Original strand, 48697130 - 48697425
Alignment:
Q  251 ttgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaac 349  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48697130 ttgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac 48697229  T
Q  350 aaataaggggaaaa-aaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattacca 448  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  48697230 aaataaggggaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaatacca 48697329  T
Q  449 ctctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  48697330 ctctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 48697425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 252 - 544
Target Start/End: Complemental strand, 10427597 - 10427315
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  10427597 tgttaggtaccagagtaacagaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgcggaaacccctcaaca 10427498  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaa-aaaattacaggacctctctctaactacaaggagagtacaattaccac 449  Q
    |||||||||||||||| |||||| || |||||| |||||||||||||||||| | ||||||| ||| ||||||||| |||||||||||   ||||||| |    
T  10427497 aataaggggaaaaaactacggggaaaaagtagataactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattacc-c 10427399  T
Q  450 tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact 544  Q
    ||||||||  |||||||||||||| ||||          |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  10427398 tctctctt-gaaataggagaatactaaca----------ctaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact 10427315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 265 - 459
Target Start/End: Complemental strand, 48783031 - 48782850
Alignment:
Q  265 agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaaaaa 364  Q
    |||| ||||||||||||||||   |||||||||| ||||||||| |||||||||||||||||||||||||||||||   |||||||||||| ||||||||    
T  48783031 agtatcaaaatattatcacgcgattaaaataagaaacgagaaaacaggaactgaacacacaatatttacgtggaaatttctcaacaaataaagggaaaaa 48782932  T
Q  365 accacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttat 459  Q
      || |||         ||||||||||||||||||||| |||||| | ||||||||||||| |||| |  |||||||||||||||||||||||||    
T  48782931 --catggg---------gagaactttcactaagtggaagaaattagatgacctctctctaaatacatg--gagtacaattaccactctctcttat 48782850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 305 - 406
Target Start/End: Complemental strand, 17248112 - 17248011
Alignment:
Q  305 aaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaa 404  Q
    ||||||| |||| || ||||||||||||| |||||| |||| || |||||||||||||||||||| || |||||||| |||||||||| |||||||||||    
T  17248112 aaaagagaaactaaatacacaatatttacatggaaatcccttaataaataaggggaaaaaaccaccggataagagtatagaactttcattaagtggaaaa 17248013  T
Q  405 aa 406  Q
    ||    
T  17248012 aa 17248011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 483
Target Start/End: Complemental strand, 1979391 - 1979269
Alignment:
Q  359 gaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactctctctta 458  Q
    ||||||| || | |||||||||||| |||||||| |||| |||| |||||||| |||||||||  || | ||||||| ||| | ||||||||||||||||    
T  1979391 gaaaaaagcatgaggtaagagtagataactttcagtaagaggaagaaattacacgacctctct--aaatgcaaggagggtatatttaccactctctctta 1979294  T
Q  459 taaataggagaatacaaacactaac 483  Q
    |||| |||||||||| | |||||||    
T  1979293 taaacaggagaatactagcactaac 1979269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 1979604 - 1979567
Alignment:
Q  318 aacacacaatatttacgtggaaacccctcaacaaataa 355  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1979604 aacacacaatatttacgtggaaacccctcaacaaataa 1979567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 30165968 - 30165895
Alignment:
Q  263 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtg 336  Q
    |||||||||||||| |||||| || ||||||||||| | ||||||| | ||| |||||||| ||||||||||||    
T  30165968 agagtaacaaaataatatcacacaactaaaataagatatgagaaaaaatgaattgaacacataatatttacgtg 30165895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 254 - 335
Target Start/End: Original strand, 36615361 - 36615442
Alignment:
Q  254 ttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgt 335  Q
    |||||||  ||||||| ||||||||||| | ||| |||||||||| | |||||||||| ||| ||||| ||| |||||||||    
T  36615361 ttaggtactagagtaataaaatattatcgcacagttaaaataagatatgagaaaagagaaaccgaacatacattatttacgt 36615442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 44562748 - 44562808
Alignment:
Q  149 aactaattataccttaaccactaaacaccactaatctttggtttaggttgtttagacactt 209  Q
    ||||||||| | ||||| |||||||||||||||||||||| ||  | ||||||||||||||    
T  44562748 aactaattagaacttaatcactaaacaccactaatctttgtttcggattgtttagacactt 44562808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 248; Significance: 1e-137; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 245 - 546
Target Start/End: Complemental strand, 34360280 - 34359980
Alignment:
Q  245 ctaaatttgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaaccc 343  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  34360280 ctaaatttgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtagaaaccc 34360181  T
Q  344 ctcaacaaataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaat 443  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34360180 ctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaat 34360081  T
Q  444 taccactctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcac 543  Q
    |||||||||||||||||||||||||||||| |  |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  34360080 taccactctctcttataaataggagaatacta--actaacacaaactaggagaaatctcacaggagaaactaatttttctctctatattttttctctcac 34359983  T
Q  544 tat 546  Q
    |||    
T  34359982 tat 34359980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 252 - 550
Target Start/End: Original strand, 29585300 - 29585597
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29585300 tgttaggtatcagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 29585399  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  29585400 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaagagagtacaattaccact 29585499  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattcta 550  Q
    ||||||||||||||||||||||| |  ||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29585500 ctctcttataaataggagaatacta--actaatacaaactaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactactcta 29585597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 252 - 546
Target Start/End: Complemental strand, 41718727 - 41718434
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41718727 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 41718628  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  41718627 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact 41718528  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  41718527 ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 41718434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 252 - 546
Target Start/End: Complemental strand, 41723453 - 41723160
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41723453 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 41723354  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  41723353 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact 41723254  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  41723253 ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 41723160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 271 - 546
Target Start/End: Complemental strand, 34352546 - 34352272
Alignment:
Q  271 aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaacaaataaggggaaaaaaccac 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34352546 aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccac 34352447  T
Q  370 ggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggaga 469  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34352446 ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggaga 34352347  T
Q  470 atacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    |||| |  |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  34352346 atacta--actaacacaaactaggagaaatctcacaggagaaactaatttttctctctatattttttctctcactat 34352272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 252 - 546
Target Start/End: Original strand, 9439372 - 9439665
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9439372 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 9439471  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  9439472 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact 9439571  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  9439572 ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 9439665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 252 - 546
Target Start/End: Original strand, 9444092 - 9444385
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9444092 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca 9444191  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccact 450  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  9444192 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact 9444291  T
Q  451 ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  9444292 ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 9444385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 4799371 - 4799315
Alignment:
Q  269 acaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacaca 325  Q
    ||||||||||||||| | |||||||||||||| |||||||||| || ||||||||||    
T  4799371 acaaaatattatcacactgctaaaataagagatgagaaaagagaaattgaacacaca 4799315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 262 - 546
Target Start/End: Original strand, 5198665 - 5198948
Alignment:
Q  262 cagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaacaaataagggga 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5198665 cagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggga 5198764  T
Q  361 aaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttata 460  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5198765 aaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttata 5198864  T
Q  461 aataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat 546  Q
    ||||||||||||| |  |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  5198865 aataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat 5198948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 25287861 - 25288095
Alignment:
Q  17 cactgctctagtactctcgacttcggcacaagcaaaagacttctcttgattaaccaaccttttagcatattcagaagcctatagaacaaaaatggaatca 116  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25287861 cactgctctagtactctcgacttcagcacaagcaaaagacttctcttgattaaccaaccttttagcatattcagaagcctatagaacaaaaatggaatca 25287960  T
Q  117 aatttcttttccatcaaaagtgctgcaacaataactaattataccttaaccactaaacaccactaatctttggtttaggttgtttagacacttgatccct 216  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25287961 aatttcttttccatcaaaagtgctacaacaataactaattataccttaaccactaaacaccactaatctttggtttaggttgtttagacacttgatccct 25288060  T
Q  217 atgtacctataacacaatacaaagtaacctaaatt 251  Q
     ||||||||||||||||||||||||||||||||||    
T  25288061 ttgtacctataacacaatacaaagtaacctaaatt 25288095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 263 - 542
Target Start/End: Complemental strand, 15603183 - 15602905
Alignment:
Q  263 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaacaaataaggggaa 361  Q
    ||||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15603183 agagtaagaaaatattatcacgcaattgaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa 15603084  T
Q  362 aaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataa 461  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||| | || |||| |||||||||||| ||| |||| |||    
T  15603083 aaaaccacggggcaagagtagagaactttcactaagtagaagaaattacaagacctctctctaaatgcatggagtgtacaattaccattctatcttgtaa 15602984  T
Q  462 ataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctca 542  Q
    |||||||||||| |  |||||||||  ||| ||||||||||| || | || ||||||||||| ||||||||||||||||||    
T  15602983 ataggagaatacta--actaacacttactaagagaaacctcatagaaaaatctaatttttctttctatatttttcctctca 15602905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 252 - 414
Target Start/End: Complemental strand, 825796 - 825632
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaaca 350  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  825796 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccactcaaca 825697  T
Q  351 aataagggg-aaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacagga 414  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  825696 aataaggggaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagga 825632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 262 - 520
Target Start/End: Complemental strand, 28716067 - 28715816
Alignment:
Q  262 cagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaa 361  Q
    |||||||||||||||||||||| ||  ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||     
T  28716067 cagagtaacaaaatattatcacacatttaaaataagagacgacaaaagaggaattgaacacacaatatttacgtggaaacccctcattaaataagggga- 28715969  T
Q  362 aaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataa 461  Q
    ||||||||  |  |||| |||||||||||||| |||||||| |||||||||||| ||||||||| | |||||||||||||||||||||  | || |||||    
T  28715968 aaaaccacaagagaagaatagagaactttcacaaagtggaagaaattacaggacatctctctaaatgcaaggagagtacaattaccaccgtttcctataa 28715869  T
Q  462 ataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttt 520  Q
    ||||||||||      |||||||||||||||||||||||| ||| ||||||||| ||||    
T  28715868 ataggagaat------actaacactacctaggagaaaccttacaagagaaactattttt 28715816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 251 - 414
Target Start/End: Complemental strand, 830453 - 830288
Alignment:
Q  251 ttgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaac 349  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  830453 ttgttaggtaccagagtaacaaaatattatcacgcagttaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac 830354  T
Q  350 aaataagggg-aaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacagga 414  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  830353 aaataaggggaaaaaaaccacggggcaagagtggagaactttcactaagtggaagaaattacagga 830288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 464 - 579
Target Start/End: Complemental strand, 830291 - 830176
Alignment:
Q  464 aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattctactaagaacaagta 563  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  830291 aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattctactaagaacaagta 830192  T
Q  564 gttgttgtgttacttt 579  Q
    ||||||||||||||||    
T  830191 gttgttgtgttacttt 830176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 464 - 579
Target Start/End: Complemental strand, 825635 - 825520
Alignment:
Q  464 aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattctactaagaacaagta 563  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  825635 aggagaatacaaacactaacactacctaggagaaacctcgcaggagaaactaatttttctctctatatttttcctctcactattctactaagaacaagta 825536  T
Q  564 gttgttgtgttacttt 579  Q
    ||||||||||||||||    
T  825535 gttgttgtgttacttt 825520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 262 - 544
Target Start/End: Original strand, 30396921 - 30397191
Alignment:
Q  262 cagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaa 361  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||| ||    
T  30396921 cagagtagcaaaatattatcacgcagctaaaataagagacgagaaaagacgaactgaacacac-atattttcgttgaaacccctcaacaaataagggaaa 30397019  T
Q  362 aaaaccacggggtaagagtagagaac-tttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttata 460  Q
    |||| ||| |||  |||||||||||| ||||||||||||||| |||||||| ||||||| ||||  |||||||||||   ||||||| |||| | ||  |    
T  30397020 aaaatcacagggcgagagtagagaacttttcactaagtggaagaaattacaagacctctttctatatacaaggagagacaaattacc-ctctatgtt-ga 30397117  T
Q  461 aataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact 544  Q
    ||||||||||||  ||||          |||||||||| ||||||||||||||||  ||| ||||||||||| |||||||||||    
T  30397118 aataggagaatattaaca----------ctaggagaaatctcacaggagaaactatatttcctctctatattgttcctctcact 30397191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 321 - 471
Target Start/End: Original strand, 13843865 - 13844014
Alignment:
Q  321 acacaatatttacgtggaaacccctcaacaaataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctc 420  Q
    ||||||||||||||||||||||||||||||||||||| | |||||  |  || ||| |||| |||| ||||| ||||||||| ||||||||||||| ||     
T  13843865 acacaatatttacgtggaaacccctcaacaaataaggag-aaaaattataggttaaaagtatagaattttcattaagtggaagaaattacaggacccctt 13843963  T
Q  421 tctaactacaaggagagtacaattaccactctctcttataaataggagaat 471  Q
    | ||| |||||| ||| || |||||||||||| | ||| ||||||||||||    
T  13843964 tataaatacaagaagaataaaattaccactctattttaaaaataggagaat 13844014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 252 - 396
Target Start/End: Original strand, 31592910 - 31593053
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaat-atttacgtggaaacccctcaaca 350  Q
    |||| |||| || ||||||| ||||||||||| ||| || ||||||||||||||||||||||||  |||| ||||| ||||||||||||| | ||||| |    
T  31592910 tgttgggtatcaaagtaacataatattatcacacagatagaataagagacgagaaaagaggaacataacatacaataatttacgtggaaatctctcaata 31593009  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaa 396  Q
    ||||| |  ||||||||||  | |||||||||||||||||||||||    
T  31593010 aataa-gaaaaaaaaccac-agataagagtagagaactttcactaa 31593053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 252 - 473
Target Start/End: Original strand, 13840240 - 13840456
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaa 351  Q
    |||| |||| |||| |||||||||||||||||| |  || ||||| ||| |||||| ||||||| |||||||  |||||||| ||  ||  |||||||||    
T  13840240 tgttgggtaccagaataacaaaatattatcacgtaattataataaaagatgagaaaggaggaaccgaacaca--atatttacatgagaattcctcaacaa 13840337  T
Q  352 ataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactc 451  Q
    | |||||| ||||  || || | ||||||||| || ||| || ||||  |||||||||||  |||||||||||| || ||||||||||||||||| | ||    
T  13840338 acaagggggaaaa--catggagcaagagtagaaaatttttaccaagta-aaaaaattacaaaacctctctctaaatataaggagagtacaattacaattc 13840434  T
Q  452 tctcttataaataggagaatac 473  Q
    ||||||| |||||  |||||||    
T  13840435 tctcttaaaaataaaagaatac 13840456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 346 - 479
Target Start/End: Complemental strand, 8004292 - 8004161
Alignment:
Q  346 caacaaataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaatta 445  Q
    ||||||||||| ||||||| | |||||||| || |||| |||||||||| | ||||| |||||| |  |||||||| ||| |  ||| ||||||||||||    
T  8004292 caacaaataagaggaaaaa-caacggggtatgactagaaaactttcactgaatggaagaaattataaaacctctctttaaatgtaagaagagtacaatta 8004194  T
Q  446 ccactctctcttataaataggagaatacaaacac 479  Q
    | |||||||||||||||||||||||||| |||||    
T  8004193 c-actctctcttataaataggagaatactaacac 8004161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 12175768 - 12175860
Alignment:
Q  272 aaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaaaaa 364  Q
    ||||||||||||||| ||||||||| ||| || |||| || || ||||||||||||||||  ||||||||  ||||| |||||| || |||||    
T  12175768 aaatattatcacgcaactaaaataaaagatgataaaaaagaaattgaacacacaatatttttgtggaaacatctcaataaataatggaaaaaa 12175860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 42117876 - 42117825
Alignment:
Q  313 aactgaacacacaatatttacgtggaaacccctcaacaaataaggggaaaaa 364  Q
    ||||||||| ||||||||||||| |||||| |||||  ||||||||||||||    
T  42117876 aactgaacatacaatatttacgtagaaacctctcaattaataaggggaaaaa 42117825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 9358158 - 9358207
Alignment:
Q  267 taacaaaatattatcacgcagctaaaataagagacgagaaaagaggaact 316  Q
    |||| ||||||||| |||||||||||| || ||||||||||||| |||||    
T  9358158 taaccaaatattattacgcagctaaaacaacagacgagaaaagaagaact 9358207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 252 - 582
Target Start/End: Complemental strand, 30235339 - 30235006
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaa 351  Q
    |||| |||| ||||||| ||||||||||| || |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  30235339 tgttgggtaccagagtagcaaaatattattacacagctaaaataaaaaatgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacga 30235240  T
Q  352 ataaggggaa-aaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctct-ctaactacaaggagagtacaattaccac 449  Q
    |||||||||| ||||||||||| |||||||||| |||||||| ||| | ||| |||||||||||||||||| |||  || ||||||||||||||||||||    
T  30235239 ataaggggaaaaaaaccacgggataagagtagaaaactttcaataactagaagaaattacaggacctctctcctatttataaggagagtacaattaccac 30235140  T
Q  450 tctctcttataaataggagaatacaaacactaacactacctaggagaaacctca-caggagaaactaatttttctctctatatttttcctctcactattc 548  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  30235139 tctctcttataaataggagaatacaaacactaacactacgtaagagaaacctcataaggagaaactaatttttctctctatatttttcctctcactactc 30235040  T
Q  549 tactaagaacaagtagttgttgtgttactttgtt 582  Q
    || | |||||||||||||||||||||||||||||    
T  30235039 tattgagaacaagtagttgttgtgttactttgtt 30235006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 257 - 544
Target Start/End: Original strand, 16183636 - 16183913
Alignment:
Q  257 ggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaacaaataa 355  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16183636 ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa 16183735  T
Q  356 ggggaaaaaaccacggggtaagagtagagaactttcactaagtggaa-aaaattacaggacctctctctaactacaaggagagtacaattaccactctct 454  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||||| |||||||||||   ||||||| ||||||    
T  16183736 ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaagacctctctctaaatacaaggagagacaaattacc-ctctct 16183834  T
Q  455 cttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact 544  Q
    |||  |||||||||||||| ||||          |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  16183835 ctt-gaaataggagaatactaaca----------ctaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact 16183913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 252 - 473
Target Start/End: Original strand, 8139964 - 8140183
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaa 351  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  8139964 tgttgggtaccagagtaacaaaatattatcacacagctaaaataagagatgagaaaagagaaactgaacgcacaatatttatgtggaaacccctcaacaa 8140063  T
Q  352 ataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagagtacaattaccactc 451  Q
    ||||||||| ||||||| ||||||||| |||| |||||||||| ||||||| |||||| | ||||||||||| | |||||||||||   ||||||| |||    
T  8140064 ataaggggagaaaaccatggggtaagattagaaaactttcactcagtggaagaaattataagacctctctcttaatacaaggagagacaaattacc-ctc 8140162  T
Q  452 tctcttataaataggagaatac 473  Q
    ||||||  ||||||||||||||    
T  8140163 tctctt-gaaataggagaatac 8140183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 252 - 437
Target Start/End: Original strand, 8138460 - 8138645
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaa 351  Q
    |||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||  |||| |||||||| || ||| |||||||||||| |||||    
T  8138460 tgttgggtagcagagtatcaaagtattatcacgcagctaaaataagagacgagaaaagaaaaacttaacacacagtaattatgtggaaaccccttaacaa 8138559  T
Q  352 ataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagag 437  Q
    | ||||||| ||||||||| || |||| ||||||||||||||||| ||||| |||||||| |||||| |||||| |||||||||||    
T  8138560 acaaggggagaaaaccacgaggcaagattagagaactttcactaaatggaagaaattacaagacctccctctaaatacaaggagag 8138645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 34813925 - 34814032
Alignment:
Q  17 cactgctctagtactctcgacttcggcacaagcaaaagacttctcttgattaaccaaccttttagcatattcagaagcctatagaacaaaaatggaatca 116  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||| ||||    
T  34813925 cactgctctagcactctcgatttcggcacaagcaaaagacttctcttgattaaccaactttttagcatcttcagaagcctattgaacaaagatgggatca 34814024  T
Q  117 aatttctt 124  Q
    ||| ||||    
T  34814025 aatatctt 34814032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 250 - 366
Target Start/End: Original strand, 36528413 - 36528529
Alignment:
Q  250 tttgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaac 349  Q
    |||||| |||| |||||||||||| ||  || ||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| ||    
T  36528413 tttgttgggtatcagagtaacaaagtaaaattacgcaactaaaataagagatgagaatagaggaattgaacacacaatatttacgtggaaacccctccac 36528512  T
Q  350 aaataaggggaaaaaac 366  Q
     |||||||  |||||||    
T  36528513 gaataaggaaaaaaaac 36528529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 409
Target Start/End: Original strand, 5102606 - 5102749
Alignment:
Q  265 agtaacaaaatattatcacgcagctaaaataagagacgag-aaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaaaa 363  Q
    ||||||||||||||||||| || ||||||||| ||| ||| |||||||| ||| || ||| ||||||||| | |||| |||||||||||||||||| |||    
T  5102606 agtaacaaaatattatcactcaactaaaataaaagatgagaaaaagagggactaaatacataatatttacat-gaaaaccctcaacaaataagggg-aaa 5102703  T
Q  364 aaccacggggtaagagtagagaactttcactaagtggaaaaaatta 409  Q
    ||||| || | ||||||||| |||||| ||||||||| | ||||||    
T  5102704 aaccatggagcaagagtagataacttttactaagtgggagaaatta 5102749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 160; Significance: 6e-85; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 252 - 544
Target Start/End: Original strand, 27226 - 27508
Alignment:
Q  252 tgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaaca 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  27226 tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagagaaactgaacacacaatactttacgtggaaacccctcaaca 27325  T
Q  351 aataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaa-aaaattacaggacctctctctaactacaaggagagtacaattaccac 449  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||  || ||||||||| |||||||||||   ||||||||     
T  27326 aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaatacttctctctaaatacaaggagagacaaattacca- 27424  T
Q  450 tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact 544  Q
    ||||||||  ||||||| |||||| ||||          |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  27425 tctctctt-gaaataggtgaatactaaca----------ctaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact 27508  T

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Target: chr1 (Bit Score: 148; Significance: 8e-78; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 247 - 544
Target Start/End: Complemental strand, 46191551 - 46191266
Alignment:
Q  247 aaatttgttaggtaacagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctc 346  Q
    |||| ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  46191551 aaatgtgttaggaaccagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacacaatat-tttacgtggaaacccctc 46191453  T
Q  347 aacaaataaggggaaaaaaccacggggtaagagtagagaactttcactaagtggaa-aaaattacaggacctctctctaactacaaggagagtacaatta 445  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | ||||||| ||| ||||||||| || ||||||||   |||||    
T  46191452 aacaaataaggggaaaaaaccacgggacaagagtagagaactttcactaagtggaagacaattacaagacttctctctaaatagaaggagagacaaatta 46191353  T
Q  446 ccactctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact 544  Q
    || |||||||||  |||||||||||||| ||||          |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  46191352 cc-ctctctctt-gaaataggagaatactaaca----------ctaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact 46191266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 263 - 437
Target Start/End: Original strand, 30697126 - 30697300
Alignment:
Q  263 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaaa 362  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  30697126 agagtaacaaaatattatcacgcagctaacataagagacgagaaaagaggaacttaacacaaaatatttacgtggaaacccctcaacaaataaggggaaa 30697225  T
Q  363 aaaccacggggtaagagtagagaactttcactaagtggaaaaaattacaggacctctctctaactacaaggagag 437  Q
    || ||||| || |||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||||||||||    
T  30697226 aagccacgtggcaagagtagagaactttcactaagtggaagaaattacaagacctctttctaaatacaaggagag 30697300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 264 - 481
Target Start/End: Complemental strand, 4130389 - 4130173
Alignment:
Q  264 gagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataaggggaaaa 363  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  4130389 gagtaacaaaatattatcacgcaactaaaataagtgacgagaaaagaggaactgaacacacaaaatttacgtggaaatccctcaacaaataaagggaaaa 4130290  T
Q  364 aaccacggggtaagagtagagaactttcactaagtggaa-aaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaa 462  Q
    |||||||||| |||||||||||||||||||||||||||| | ||||||| ||| ||||||||| |||||||||||   ||||||| |||||||||  |||    
T  4130289 aaccacggggcaagagtagagaactttcactaagtggaagataattacaagacttctctctaaatacaaggagagacaaattacc-ctctctctt-gaaa 4130192  T
Q  463 taggagaatacaaacacta 481  Q
    ||||| ||||| |||||||    
T  4130191 taggacaatactaacacta 4130173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 364775 - 364683
Alignment:
Q  263 agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttacgtggaaacccctcaacaaataa 355  Q
    ||||||| |||||| |||||  ||  |||||||| ||| ||||||| |||||  || |||||||||||||||| ||| ||||| ||| |||||    
T  364775 agagtaataaaataatatcatacaattaaaataatagatgagaaaaaaggaatcgaccacacaatatttacgttgaatccccttaaccaataa 364683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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