View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12513_high_20 (Length: 257)
Name: NF12513_high_20
Description: NF12513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12513_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 41319972 - 41320202
Alignment:
| Q |
19 |
acgaagacggtatcatcgtcacccatgacgaaccaccgtacatctttcattccgagccggagtgtttccgagacgattcgtgagattcggattgcggaac |
118 |
Q |
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| T |
41319972 |
acgaagacggtatcatcgtcacccatgacgaaccaccgtacatctttcattccgagccggagtgtttccgatacgattcgtgagattcggattgcggaac |
41320071 |
T |
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| Q |
119 |
ggtgaccttgtttgtttttataagcgaattttgaagtgtcgccggagattctcaccggcgggagccgactttcgttcttttgggttttaaccttgttgtc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41320072 |
ggtgaccttgtttgtttttataagcgaattttgaagtgtcgccggagattctcaccggcgggagccgactttcgttcttttgggttttaaccttgttgtc |
41320171 |
T |
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| Q |
219 |
tagccatactacaccacgcatttcctttgct |
249 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
41320172 |
tagccatactacaccacgcatttcctttgct |
41320202 |
T |
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