View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12513_high_25 (Length: 217)

Name: NF12513_high_25
Description: NF12513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12513_high_25
NF12513_high_25
[»] chr8 (45 HSPs)
chr8 (1-149)||(6679445-6679593)
chr8 (1-146)||(803972-804117)
chr8 (1-146)||(14565479-14565624)
chr8 (1-149)||(6603992-6604140)
chr8 (1-149)||(16271523-16271671)
chr8 (4-149)||(12305092-12305237)
chr8 (4-149)||(29303728-29303873)
chr8 (4-147)||(23655263-23655406)
chr8 (4-149)||(22061735-22061880)
chr8 (4-147)||(1266574-1266717)
chr8 (4-132)||(20975953-20976081)
chr8 (22-146)||(22051200-22051324)
chr8 (4-140)||(31416776-31416912)
chr8 (22-147)||(21840753-21840878)
chr8 (4-147)||(19851747-19851890)
chr8 (4-147)||(19857783-19857926)
chr8 (4-147)||(20010202-20010345)
chr8 (4-146)||(31571144-31571286)
chr8 (4-137)||(16877397-16877530)
chr8 (4-137)||(21196804-21196937)
chr8 (22-133)||(20388449-20388560)
chr8 (88-147)||(21681856-21681915)
chr8 (31-133)||(20396454-20396556)
chr8 (4-134)||(23949268-23949398)
chr8 (70-147)||(20008186-20008263)
chr8 (4-110)||(22982807-22982913)
chr8 (4-134)||(23157313-23157443)
chr8 (1-110)||(20652632-20652741)
chr8 (4-121)||(21850639-21850756)
chr8 (150-194)||(16886010-16886054)
chr8 (4-116)||(19485172-19485284)
chr8 (4-107)||(20018052-20018155)
chr8 (4-116)||(22315558-22315670)
chr8 (4-107)||(19113066-19113169)
chr8 (96-147)||(21324803-21324854)
chr8 (149-194)||(24126979-24127025)
chr8 (150-194)||(23748990-23749035)
chr8 (4-107)||(17674325-17674428)
chr8 (7-137)||(19863403-19863533)
chr8 (7-137)||(19868040-19868170)
chr8 (4-82)||(25282531-25282609)
chr8 (150-194)||(1051989-1052034)
chr8 (22-122)||(22377774-22377873)
chr8 (22-122)||(22383949-22384048)
chr8 (149-177)||(37240970-37240998)
[»] chr4 (48 HSPs)
chr4 (1-149)||(3264650-3264798)
chr4 (2-149)||(44661723-44661870)
chr4 (1-149)||(29453393-29453541)
chr4 (1-149)||(11207087-11207235)
chr4 (4-149)||(20891250-20891395)
chr4 (22-149)||(27900654-27900781)
chr4 (4-147)||(15358949-15359092)
chr4 (4-149)||(1649136-1649281)
chr4 (37-147)||(16146182-16146292)
chr4 (4-147)||(15246194-15246337)
chr4 (4-147)||(15003223-15003366)
chr4 (39-149)||(33223186-33223296)
chr4 (4-146)||(51606040-51606182)
chr4 (4-147)||(15070683-15070826)
chr4 (4-147)||(15077905-15078048)
chr4 (4-134)||(15414885-15415015)
chr4 (4-135)||(14997598-14997729)
chr4 (4-137)||(9291115-9291248)
chr4 (4-138)||(8706197-8706331)
chr4 (4-137)||(15293016-15293149)
chr4 (4-86)||(16685584-16685666)
chr4 (4-80)||(8053222-8053298)
chr4 (150-194)||(50083513-50083557)
chr4 (4-107)||(12476910-12477013)
chr4 (4-107)||(18297515-18297618)
chr4 (4-107)||(23956057-23956160)
chr4 (4-107)||(29039003-29039106)
chr4 (4-86)||(12342722-12342804)
chr4 (4-134)||(55375217-55375347)
chr4 (150-194)||(677705-677750)
chr4 (4-137)||(13247925-13248058)
chr4 (28-116)||(14266522-14266610)
chr4 (150-194)||(44656513-44656557)
chr4 (150-194)||(44662432-44662476)
chr4 (4-107)||(8386722-8386825)
chr4 (4-107)||(19778392-19778495)
chr4 (4-107)||(27711646-27711749)
chr4 (145-194)||(3096375-3096425)
chr4 (31-137)||(14159772-14159878)
chr4 (4-74)||(18864761-18864831)
chr4 (150-194)||(3265363-3265408)
chr4 (150-194)||(6457488-6457533)
chr4 (31-116)||(12523977-12524062)
chr4 (150-194)||(49239591-49239636)
chr4 (150-194)||(49748305-49748350)
chr4 (150-194)||(51930923-51930968)
chr4 (148-177)||(52501855-52501884)
chr4 (40-116)||(14303613-14303689)
[»] chr7 (54 HSPs)
chr7 (1-149)||(26118448-26118596)
chr7 (1-149)||(8211971-8212119)
chr7 (1-149)||(11306106-11306254)
chr7 (1-149)||(49152559-49152707)
chr7 (1-149)||(13968511-13968659)
chr7 (4-149)||(12457037-12457182)
chr7 (4-147)||(16950317-16950460)
chr7 (4-147)||(1253-1396)
chr7 (4-147)||(14286222-14286365)
chr7 (4-149)||(13021615-13021760)
chr7 (4-149)||(14130131-14130276)
chr7 (4-149)||(14433949-14434094)
chr7 (4-147)||(19147471-19147614)
chr7 (4-147)||(6413771-6413914)
chr7 (4-147)||(14264090-14264233)
chr7 (4-147)||(20746870-20747013)
chr7 (37-149)||(12455960-12456072)
chr7 (4-147)||(15340691-15340834)
chr7 (4-147)||(15102449-15102590)
chr7 (4-131)||(13665813-13665940)
chr7 (4-143)||(23199589-23199728)
chr7 (4-143)||(23505716-23505855)
chr7 (4-145)||(16072140-16072281)
chr7 (4-138)||(12206646-12206780)
chr7 (4-146)||(18053799-18053941)
chr7 (4-134)||(11388274-11388404)
chr7 (4-116)||(12193846-12193958)
chr7 (4-116)||(23516637-23516749)
chr7 (4-107)||(7824199-7824302)
chr7 (4-107)||(27107642-27107745)
chr7 (4-89)||(14936664-14936749)
chr7 (4-89)||(15364257-15364342)
chr7 (4-137)||(21674401-21674534)
chr7 (150-194)||(13595969-13596013)
chr7 (4-107)||(14332696-14332799)
chr7 (4-135)||(45146826-45146957)
chr7 (4-122)||(15624836-15624954)
chr7 (4-110)||(35964718-35964824)
chr7 (147-183)||(32628727-32628763)
chr7 (4-107)||(8198927-8199030)
chr7 (4-107)||(10871294-10871397)
chr7 (2-89)||(12368442-12368529)
chr7 (4-107)||(18551626-18551729)
chr7 (4-107)||(44791219-44791322)
chr7 (4-146)||(15204139-15204281)
chr7 (149-194)||(40921678-40921723)
chr7 (4-84)||(17923985-17924065)
chr7 (148-194)||(8195979-8196026)
chr7 (4-107)||(8707904-8708007)
chr7 (149-194)||(48986702-48986748)
chr7 (150-194)||(751187-751232)
chr7 (150-194)||(8212684-8212729)
chr7 (31-116)||(15160952-15161037)
chr7 (28-116)||(18178032-18178120)
[»] chr5 (56 HSPs)
chr5 (1-149)||(14887029-14887177)
chr5 (1-149)||(25848257-25848405)
chr5 (1-146)||(24798435-24798580)
chr5 (1-149)||(20342464-20342612)
chr5 (1-149)||(37545534-37545682)
chr5 (4-149)||(22502861-22503006)
chr5 (4-149)||(22381381-22381526)
chr5 (4-149)||(23080130-23080275)
chr5 (4-149)||(22462134-22462279)
chr5 (22-147)||(22235979-22236104)
chr5 (4-134)||(24749595-24749725)
chr5 (22-149)||(20821635-20821762)
chr5 (22-149)||(28895001-28895128)
chr5 (22-149)||(28923827-28923954)
chr5 (22-134)||(24735670-24735782)
chr5 (4-147)||(21890800-21890943)
chr5 (4-146)||(17269374-17269516)
chr5 (22-149)||(20773942-20774069)
chr5 (4-137)||(11210735-11210868)
chr5 (4-109)||(21564014-21564119)
chr5 (4-137)||(24581405-24581538)
chr5 (40-138)||(21831820-21831918)
chr5 (150-194)||(24009348-24009392)
chr5 (4-83)||(1069-1148)
chr5 (4-107)||(21937229-21937332)
chr5 (4-134)||(20468137-20468267)
chr5 (85-147)||(23442415-23442477)
chr5 (150-194)||(10687437-10687481)
chr5 (150-194)||(40009747-40009791)
chr5 (147-194)||(15462790-15462837)
chr5 (25-131)||(23471447-23471553)
chr5 (25-122)||(21339348-21339445)
chr5 (4-137)||(27011278-27011411)
chr5 (150-194)||(43030343-43030387)
chr5 (4-107)||(16356744-16356847)
chr5 (4-107)||(19770202-19770305)
chr5 (148-194)||(20348443-20348490)
chr5 (4-107)||(27610596-27610699)
chr5 (4-107)||(27668531-27668634)
chr5 (4-107)||(34566736-34566839)
chr5 (4-107)||(40709022-40709125)
chr5 (150-194)||(20341854-20341899)
chr5 (22-95)||(21229232-21229305)
chr5 (31-116)||(22348656-22348741)
chr5 (4-137)||(23503637-23503770)
chr5 (150-194)||(38015002-38015046)
chr5 (4-107)||(27518649-27518752)
chr5 (16-107)||(41771084-41771175)
chr5 (149-194)||(19509428-19509474)
chr5 (150-194)||(1110444-1110489)
chr5 (4-65)||(21405106-21405167)
chr5 (150-194)||(22246995-22247040)
chr5 (31-116)||(22332955-22333040)
chr5 (31-116)||(27685468-27685553)
chr5 (31-116)||(29476141-29476226)
chr5 (31-116)||(37291564-37291649)
[»] chr2 (45 HSPs)
chr2 (1-149)||(11358270-11358418)
chr2 (1-149)||(20832884-20833032)
chr2 (1-149)||(31830557-31830705)
chr2 (1-149)||(1063650-1063798)
chr2 (4-147)||(23276677-23276820)
chr2 (4-147)||(23293859-23294002)
chr2 (23-134)||(19652467-19652578)
chr2 (1-81)||(20828226-20828306)
chr2 (4-146)||(27787643-27787785)
chr2 (4-134)||(27365478-27365608)
chr2 (4-137)||(25128558-25128691)
chr2 (4-146)||(12574255-12574397)
chr2 (4-137)||(12640318-12640451)
chr2 (4-134)||(23087364-23087494)
chr2 (4-121)||(22276206-22276323)
chr2 (4-89)||(22761968-22762053)
chr2 (4-110)||(23817452-23817558)
chr2 (40-134)||(24825717-24825811)
chr2 (4-137)||(24831586-24831719)
chr2 (43-137)||(45529422-45529516)
chr2 (4-137)||(24570067-24570200)
chr2 (4-73)||(24948564-24948633)
chr2 (4-107)||(9610077-9610180)
chr2 (4-107)||(10868791-10868894)
chr2 (4-107)||(16925201-16925304)
chr2 (4-107)||(16982093-16982196)
chr2 (4-107)||(16998941-16999044)
chr2 (4-107)||(17063658-17063761)
chr2 (4-107)||(17067316-17067419)
chr2 (4-107)||(44385968-44386071)
chr2 (150-194)||(11358980-11359025)
chr2 (10-107)||(27217957-27218054)
chr2 (4-80)||(22325255-22325331)
chr2 (150-194)||(24480368-24480412)
chr2 (150-194)||(35586743-35586787)
chr2 (4-107)||(24709974-24710077)
chr2 (4-74)||(18362700-18362770)
chr2 (149-194)||(36983302-36983348)
chr2 (150-194)||(18979645-18979690)
chr2 (150-194)||(21123530-21123575)
chr2 (31-116)||(24262302-24262387)
chr2 (31-116)||(41608811-41608896)
chr2 (149-181)||(23887115-23887147)
chr2 (4-80)||(27371237-27371313)
chr2 (150-193)||(42553119-42553163)
[»] chr6 (49 HSPs)
chr6 (4-149)||(10468853-10468998)
chr6 (1-149)||(24364544-24364692)
chr6 (4-147)||(14381471-14381614)
chr6 (37-147)||(19453554-19453664)
chr6 (4-147)||(21471735-21471878)
chr6 (4-149)||(8766152-8766297)
chr6 (22-147)||(17415620-17415745)
chr6 (22-147)||(18801076-18801201)
chr6 (25-146)||(15459471-15459592)
chr6 (4-147)||(22796636-22796779)
chr6 (4-146)||(28282817-28282959)
chr6 (22-103)||(5297227-5297308)
chr6 (4-147)||(1640906-1641049)
chr6 (4-147)||(25768325-25768468)
chr6 (4-146)||(27560621-27560763)
chr6 (4-134)||(34645590-34645720)
chr6 (4-137)||(16382377-16382510)
chr6 (4-131)||(19879448-19879575)
chr6 (4-137)||(23996392-23996525)
chr6 (4-110)||(16098221-16098327)
chr6 (13-134)||(11280518-11280639)
chr6 (4-121)||(18837912-18838029)
chr6 (37-134)||(21564169-21564266)
chr6 (4-116)||(27187601-27187713)
chr6 (4-116)||(27261527-27261639)
chr6 (4-110)||(1648788-1648894)
chr6 (4-110)||(15078368-15078474)
chr6 (143-193)||(17355533-17355583)
chr6 (7-121)||(25743095-25743209)
chr6 (150-194)||(1537094-1537138)
chr6 (150-194)||(19215588-19215632)
chr6 (150-194)||(33876307-33876351)
chr6 (4-109)||(18794862-18794967)
chr6 (4-88)||(1652266-1652350)
chr6 (4-116)||(28292376-28292488)
chr6 (4-107)||(16626721-16626824)
chr6 (4-107)||(21412942-21413045)
chr6 (4-107)||(24313172-24313275)
chr6 (4-107)||(29591924-29592027)
chr6 (12-121)||(16233369-16233478)
chr6 (150-194)||(30798416-30798461)
chr6 (4-116)||(1543088-1543200)
chr6 (147-194)||(6955422-6955470)
chr6 (10-110)||(16927650-16927750)
chr6 (149-194)||(6928840-6928886)
chr6 (7-121)||(18571811-18571925)
chr6 (31-116)||(2874834-2874919)
chr6 (31-116)||(25765321-25765406)
chr6 (149-181)||(17703545-17703577)
[»] scaffold0089 (2 HSPs)
scaffold0089 (1-149)||(16572-16720)
scaffold0089 (150-194)||(17282-17326)
[»] chr1 (36 HSPs)
chr1 (1-149)||(37677363-37677511)
chr1 (4-149)||(20294695-20294840)
chr1 (25-149)||(31550133-31550257)
chr1 (4-147)||(20939994-20940137)
chr1 (4-147)||(20835819-20835962)
chr1 (9-147)||(19854599-19854737)
chr1 (5-149)||(22433048-22433192)
chr1 (4-149)||(20856692-20856837)
chr1 (4-147)||(41308110-41308253)
chr1 (25-134)||(19760818-19760927)
chr1 (4-107)||(20831323-20831426)
chr1 (4-98)||(19663067-19663161)
chr1 (150-194)||(1525607-1525651)
chr1 (150-194)||(12203973-12204017)
chr1 (150-194)||(18419469-18419513)
chr1 (150-194)||(36210641-36210685)
chr1 (150-194)||(36210752-36210796)
chr1 (4-116)||(41354400-41354512)
chr1 (92-147)||(19664895-19664950)
chr1 (4-134)||(22135489-22135619)
chr1 (150-194)||(38906766-38906810)
chr1 (4-107)||(33390960-33391063)
chr1 (4-107)||(51333424-51333527)
chr1 (4-110)||(20914532-20914638)
chr1 (10-116)||(21830619-21830725)
chr1 (150-194)||(19045027-19045072)
chr1 (150-194)||(20395634-20395679)
chr1 (4-80)||(21837302-21837378)
chr1 (4-107)||(16350530-16350633)
chr1 (149-194)||(20395000-20395046)
chr1 (150-184)||(26722471-26722505)
chr1 (150-194)||(31534026-31534071)
chr1 (150-194)||(31550819-31550864)
chr1 (150-194)||(6741871-6741915)
chr1 (1-29)||(31539925-31539953)
chr1 (149-181)||(37683437-37683469)
[»] chr3 (58 HSPs)
chr3 (1-149)||(47123841-47123989)
chr3 (1-149)||(28754215-28754363)
chr3 (1-149)||(10383866-10384014)
chr3 (4-149)||(16329746-16329891)
chr3 (4-149)||(11961121-11961266)
chr3 (4-147)||(18134433-18134576)
chr3 (22-149)||(16836615-16836742)
chr3 (4-147)||(17492529-17492672)
chr3 (1-147)||(13322736-13322882)
chr3 (22-149)||(10420150-10420277)
chr3 (4-147)||(15953055-15953198)
chr3 (37-147)||(11303893-11304003)
chr3 (4-147)||(12360629-12360772)
chr3 (4-146)||(8759169-8759311)
chr3 (22-147)||(13001808-13001933)
chr3 (4-146)||(4678338-4678480)
chr3 (4-134)||(13972207-13972337)
chr3 (4-134)||(14086585-14086715)
chr3 (4-146)||(41177422-41177564)
chr3 (4-149)||(16381015-16381162)
chr3 (4-146)||(13941924-13942066)
chr3 (4-146)||(15227549-15227691)
chr3 (10-110)||(26009086-26009186)
chr3 (40-147)||(12850402-12850509)
chr3 (4-146)||(44777147-44777289)
chr3 (4-137)||(8274497-8274630)
chr3 (4-137)||(16742801-16742934)
chr3 (4-137)||(15576659-15576792)
chr3 (4-88)||(14573887-14573971)
chr3 (85-147)||(14571747-14571809)
chr3 (4-110)||(16756683-16756789)
chr3 (4-137)||(14183010-14183143)
chr3 (4-116)||(6600667-6600779)
chr3 (4-116)||(53385116-53385228)
chr3 (4-137)||(18748574-18748707)
chr3 (4-120)||(13975144-13975259)
chr3 (4-107)||(10005529-10005632)
chr3 (40-107)||(13252619-13252686)
chr3 (148-194)||(14951655-14951702)
chr3 (4-107)||(15348343-15348446)
chr3 (4-107)||(15589490-15589593)
chr3 (148-194)||(16413057-16413104)
chr3 (4-107)||(16635702-16635805)
chr3 (14-137)||(17193003-17193126)
chr3 (4-107)||(20062152-20062255)
chr3 (4-107)||(43163026-43163129)
chr3 (4-110)||(267356-267462)
chr3 (25-122)||(15248061-15248158)
chr3 (31-116)||(26792524-26792609)
chr3 (4-116)||(14876597-14876709)
chr3 (150-194)||(50654771-50654815)
chr3 (4-107)||(10906139-10906242)
chr3 (4-107)||(48425376-48425479)
chr3 (4-122)||(15208805-15208923)
chr3 (150-194)||(3109805-3109850)
chr3 (150-194)||(14843922-14843967)
chr3 (31-116)||(15725059-15725144)
chr3 (4-128)||(6152949-6153073)
[»] scaffold0069 (1 HSPs)
scaffold0069 (13-149)||(38758-38894)
[»] scaffold0093 (1 HSPs)
scaffold0093 (4-149)||(26560-26705)
[»] scaffold0010 (2 HSPs)
scaffold0010 (4-147)||(42195-42338)
scaffold0010 (4-147)||(47261-47404)
[»] scaffold1124 (1 HSPs)
scaffold1124 (4-147)||(399-542)
[»] scaffold0222 (1 HSPs)
scaffold0222 (4-147)||(3217-3360)
[»] scaffold0053 (2 HSPs)
scaffold0053 (4-147)||(57679-57822)
scaffold0053 (4-147)||(48895-49038)
[»] scaffold0035 (1 HSPs)
scaffold0035 (4-147)||(3052-3195)
[»] scaffold0034 (2 HSPs)
scaffold0034 (4-147)||(13763-13906)
scaffold0034 (4-147)||(4815-4958)
[»] scaffold0483 (1 HSPs)
scaffold0483 (4-149)||(9945-10090)
[»] scaffold0071 (1 HSPs)
scaffold0071 (4-149)||(49069-49214)
[»] scaffold0060 (1 HSPs)
scaffold0060 (4-149)||(43082-43227)
[»] scaffold0058 (1 HSPs)
scaffold0058 (4-149)||(19419-19564)
[»] scaffold0203 (1 HSPs)
scaffold0203 (4-144)||(14113-14253)
[»] scaffold0004 (4 HSPs)
scaffold0004 (4-147)||(117869-118012)
scaffold0004 (4-147)||(323005-323148)
scaffold0004 (4-147)||(386120-386263)
scaffold0004 (40-135)||(203366-203461)
[»] scaffold0518 (1 HSPs)
scaffold0518 (37-149)||(11068-11180)
[»] scaffold0298 (3 HSPs)
scaffold0298 (4-147)||(20284-20427)
scaffold0298 (37-147)||(13256-13366)
scaffold0298 (37-147)||(17026-17136)
[»] scaffold0235 (2 HSPs)
scaffold0235 (4-147)||(21533-21676)
scaffold0235 (4-137)||(26117-26250)
[»] scaffold0120 (2 HSPs)
scaffold0120 (4-147)||(1386-1529)
scaffold0120 (4-116)||(6355-6467)
[»] scaffold0011 (3 HSPs)
scaffold0011 (4-147)||(148871-149014)
scaffold0011 (4-147)||(195565-195708)
scaffold0011 (4-135)||(180237-180368)
[»] scaffold0465 (1 HSPs)
scaffold0465 (4-149)||(1096-1241)
[»] scaffold0348 (1 HSPs)
scaffold0348 (40-149)||(6483-6592)
[»] scaffold0213 (1 HSPs)
scaffold0213 (37-149)||(6232-6344)
[»] scaffold0114 (3 HSPs)
scaffold0114 (37-149)||(43804-43916)
scaffold0114 (37-149)||(44816-44928)
scaffold0114 (37-149)||(20421-20533)
[»] scaffold0101 (1 HSPs)
scaffold0101 (5-149)||(5315-5459)
[»] scaffold0067 (3 HSPs)
scaffold0067 (1-149)||(52038-52186)
scaffold0067 (1-149)||(61072-61220)
scaffold0067 (1-149)||(67460-67608)
[»] scaffold0742 (1 HSPs)
scaffold0742 (4-147)||(5514-5657)
[»] scaffold0156 (1 HSPs)
scaffold0156 (4-147)||(27526-27669)
[»] scaffold0108 (1 HSPs)
scaffold0108 (4-147)||(47425-47568)
[»] scaffold0005 (1 HSPs)
scaffold0005 (5-147)||(260609-260751)
[»] scaffold0139 (2 HSPs)
scaffold0139 (22-147)||(27820-27945)
scaffold0139 (37-147)||(1044-1154)
[»] scaffold0009 (1 HSPs)
scaffold0009 (37-149)||(248912-249024)
[»] scaffold1710 (1 HSPs)
scaffold1710 (4-147)||(190-333)
[»] scaffold0367 (1 HSPs)
scaffold0367 (4-147)||(7100-7243)
[»] scaffold0239 (1 HSPs)
scaffold0239 (4-147)||(12643-12786)
[»] scaffold0124 (3 HSPs)
scaffold0124 (4-147)||(261-404)
scaffold0124 (37-147)||(11189-11299)
scaffold0124 (4-110)||(7672-7778)
[»] scaffold0113 (1 HSPs)
scaffold0113 (4-143)||(25727-25866)
[»] scaffold0309 (1 HSPs)
scaffold0309 (4-147)||(10094-10237)
[»] scaffold0106 (1 HSPs)
scaffold0106 (4-147)||(31711-31854)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-147)||(51725-51868)
[»] scaffold0029 (2 HSPs)
scaffold0029 (22-149)||(95882-96009)
scaffold0029 (4-134)||(112873-113003)
[»] scaffold0600 (1 HSPs)
scaffold0600 (4-147)||(4176-4319)
[»] scaffold0404 (1 HSPs)
scaffold0404 (4-147)||(5051-5194)
[»] scaffold0026 (2 HSPs)
scaffold0026 (4-147)||(37503-37646)
scaffold0026 (76-141)||(38107-38173)
[»] scaffold0001 (2 HSPs)
scaffold0001 (5-147)||(90795-90937)
scaffold0001 (34-83)||(114545-114594)
[»] scaffold0751 (1 HSPs)
scaffold0751 (4-141)||(2101-2238)
[»] scaffold0395 (1 HSPs)
scaffold0395 (4-145)||(5776-5917)
[»] scaffold0192 (2 HSPs)
scaffold0192 (4-147)||(26443-26586)
scaffold0192 (4-113)||(26859-26968)
[»] scaffold0523 (1 HSPs)
scaffold0523 (5-147)||(171-312)
[»] scaffold0104 (1 HSPs)
scaffold0104 (4-134)||(842-972)
[»] scaffold0076 (2 HSPs)
scaffold0076 (4-134)||(33539-33669)
scaffold0076 (4-107)||(40599-40702)
[»] scaffold0028 (3 HSPs)
scaffold0028 (4-134)||(50376-50506)
scaffold0028 (4-107)||(106435-106538)
scaffold0028 (4-116)||(43486-43598)
[»] scaffold0326 (1 HSPs)
scaffold0326 (4-147)||(18399-18542)
[»] scaffold0130 (1 HSPs)
scaffold0130 (12-134)||(10610-10732)
[»] scaffold0102 (2 HSPs)
scaffold0102 (1-147)||(40040-40185)
scaffold0102 (150-194)||(11078-11123)
[»] scaffold0234 (1 HSPs)
scaffold0234 (4-138)||(24933-25067)
[»] scaffold0064 (2 HSPs)
scaffold0064 (4-134)||(28630-28760)
scaffold0064 (4-134)||(40621-40751)
[»] scaffold0225 (1 HSPs)
scaffold0225 (4-137)||(23705-23838)
[»] scaffold0066 (1 HSPs)
scaffold0066 (4-137)||(46465-46598)
[»] scaffold0047 (1 HSPs)
scaffold0047 (4-89)||(8-93)
[»] scaffold0021 (1 HSPs)
scaffold0021 (4-137)||(71530-71663)
[»] scaffold0585 (1 HSPs)
scaffold0585 (4-147)||(6898-7041)
[»] scaffold0090 (2 HSPs)
scaffold0090 (10-131)||(19166-19287)
scaffold0090 (10-131)||(23328-23449)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-89)||(136269-136354)
[»] scaffold0692 (1 HSPs)
scaffold0692 (4-107)||(3737-3840)
[»] scaffold0249 (1 HSPs)
scaffold0249 (52-147)||(4912-5007)
[»] scaffold0379 (1 HSPs)
scaffold0379 (4-134)||(12839-12969)
[»] scaffold0100 (1 HSPs)
scaffold0100 (4-134)||(25581-25711)
[»] scaffold0037 (2 HSPs)
scaffold0037 (4-134)||(98329-98459)
scaffold0037 (4-134)||(116767-116897)
[»] scaffold0761 (1 HSPs)
scaffold0761 (4-137)||(248-381)
[»] scaffold0507 (1 HSPs)
scaffold0507 (4-137)||(216-349)
[»] scaffold0327 (1 HSPs)
scaffold0327 (4-137)||(7479-7612)
[»] scaffold0218 (1 HSPs)
scaffold0218 (4-121)||(3806-3923)
[»] scaffold0403 (1 HSPs)
scaffold0403 (4-88)||(3151-3235)
[»] scaffold0387 (1 HSPs)
scaffold0387 (4-107)||(14478-14581)
[»] scaffold0162 (1 HSPs)
scaffold0162 (4-107)||(13249-13352)
[»] scaffold0647 (1 HSPs)
scaffold0647 (40-134)||(1222-1316)
[»] scaffold0193 (1 HSPs)
scaffold0193 (77-147)||(1104-1174)
[»] scaffold0808 (1 HSPs)
scaffold0808 (4-137)||(916-1049)
[»] scaffold0554 (1 HSPs)
scaffold0554 (1-74)||(3533-3606)
[»] scaffold0357 (1 HSPs)
scaffold0357 (4-137)||(14834-14967)
[»] scaffold0244 (1 HSPs)
scaffold0244 (4-89)||(26019-26104)
[»] scaffold0207 (1 HSPs)
scaffold0207 (4-89)||(18410-18495)
[»] scaffold0132 (2 HSPs)
scaffold0132 (4-137)||(14968-15100)
scaffold0132 (4-110)||(43876-43982)
[»] scaffold0180 (1 HSPs)
scaffold0180 (150-194)||(2961-3005)
[»] scaffold0077 (1 HSPs)
scaffold0077 (4-135)||(28128-28259)
[»] scaffold0924 (1 HSPs)
scaffold0924 (58-140)||(4199-4281)
[»] scaffold0457 (1 HSPs)
scaffold0457 (149-191)||(10995-11037)
[»] scaffold0454 (1 HSPs)
scaffold0454 (10-116)||(7271-7377)
[»] scaffold0546 (1 HSPs)
scaffold0546 (31-116)||(4294-4379)
[»] scaffold0109 (2 HSPs)
scaffold0109 (31-116)||(8928-9013)
scaffold0109 (31-116)||(33462-33547)
[»] scaffold0041 (1 HSPs)
scaffold0041 (149-194)||(51372-51417)
[»] scaffold0411 (1 HSPs)
scaffold0411 (31-134)||(14968-15071)
[»] scaffold0323 (1 HSPs)
scaffold0323 (4-71)||(5160-5227)
[»] scaffold0730 (1 HSPs)
scaffold0730 (4-118)||(5453-5567)
[»] scaffold0137 (1 HSPs)
scaffold0137 (150-184)||(25115-25149)
[»] scaffold0074 (1 HSPs)
scaffold0074 (40-122)||(3466-3548)
[»] scaffold1026 (1 HSPs)
scaffold1026 (150-194)||(595-640)
[»] scaffold0359 (1 HSPs)
scaffold0359 (25-134)||(17301-17410)
[»] scaffold0136 (1 HSPs)
scaffold0136 (150-194)||(398-443)
[»] scaffold0117 (1 HSPs)
scaffold0117 (4-121)||(1286-1403)
[»] scaffold0072 (1 HSPs)
scaffold0072 (150-194)||(62796-62841)
[»] scaffold0023 (1 HSPs)
scaffold0023 (25-122)||(4337-4434)
[»] scaffold0022 (1 HSPs)
scaffold0022 (25-122)||(127082-127179)
[»] scaffold0894 (1 HSPs)
scaffold0894 (4-116)||(1471-1583)
[»] scaffold0216 (1 HSPs)
scaffold0216 (40-116)||(678-754)
[»] scaffold0044 (1 HSPs)
scaffold0044 (40-116)||(952-1028)
[»] scaffold0007 (1 HSPs)
scaffold0007 (4-116)||(46560-46672)


Alignment Details
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 6679593 - 6679445
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6679593 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 6679494  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6679493 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 6679445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 803972 - 804117
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  803972 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 804071  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  804072 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttca 804117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 14565624 - 14565479
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14565624 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 14565525  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  14565524 ggtttgagtcgggtgaaagtattgtgttgggaccggatttggttca 14565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 6604140 - 6603992
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |    
T  6604140 cctttgattgagtttacgtataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttgtgtt 6604041  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6604040 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 6603992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16271523 - 16271671
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16271523 cctttgattgaattcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 16271622  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  16271623 ggtttgcgtcgggtgagagtgttgtgttgggaccggacttggttcatga 16271671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 12305237 - 12305092
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  12305237 ttgattgagttcacttataacaacagctatcactcgagcattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggacccctttatgctggt 12305138  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||    
T  12305137 ttgagtcgggtgagagtgctgtgttgggaccggacttggttcatga 12305092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 29303728 - 29303873
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29303728 ttgatagagttcacttataacaacaactatcattcgagtataggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgctggt 29303827  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  29303828 ttgagtcaggtgagagtgttgtgttgggaccggatttggttcatga 29303873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 23655406 - 23655263
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| ||||||||| ||||||||||||||||||| |||||||| |||||||| || ||||||||||||||||    
T  23655406 ttgatagagttcacgtacaacaacagttatcattcgagtattagtatggcaccgttcgaagctttgtatggtcggaggtgcagaactcctttatgctggt 23655307  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  23655306 ttgagtcgggtgaaagtgttgtgttgggaccggatttggttcat 23655263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 22061735 - 22061880
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||||||||||||||||| |||| |||||||| |||||||| |||||||||||||||||||    
T  22061735 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcaaagctttgtatggtcggaggtgcaggactcctttatgctggt 22061834  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| || |||||||||||||||||||||||||||||||||||    
T  22061835 ttgagtcaggagagagtgttgtgttgggaccggatttggttcatga 22061880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 1266717 - 1266574
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| | |||||| ||||||||||| |||| ||    
T  1266717 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcagaggtgcaggactcctttgtgctagt 1266618  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  1266617 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 1266574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 20975953 - 20976081
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  20975953 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 20976052  T
Q  104 ttgagtcgggtgagagtgttgtgttggga 132  Q
    ||||||| || ||||||||||||||||||    
T  20976053 ttgagtcaggagagagtgttgtgttggga 20976081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 22051324 - 22051200
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||| || |||||||    
T  22051324 aacaacagttaccattcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactccgttatgctggtttgagtcaggagagagtg 22051225  T
Q  122 ttgtgttgggaccggatttggttca 146  Q
    ||||||||||||| |||||||||||    
T  22051224 ttgtgttgggaccagatttggttca 22051200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 31416776 - 31416912
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||| ||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||    
T  31416776 ttgatagagttcacatacaacaacagttaccattcgagtattagtatggcaccgttcgaagctttgtatggtcggaggtgcatgactcctttatgctggt 31416875  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggattt 140  Q
    ||||||| || ||||||||||||||||||||||||||    
T  31416876 ttgagtcaggagagagtgttgtgttgggaccggattt 31416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 21840878 - 21840753
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||| || |||||||||||||| || ||||    
T  21840878 aacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggacccctttgtgttggtttgagtcgggagaaagtg 21840779  T
Q  122 ttgtgttgggaccggatttggttcat 147  Q
    | ||||||||||| ||||| ||||||    
T  21840778 tggtgttgggaccagatttagttcat 21840753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 19851890 - 19851747
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || || ||||||||||||| |||||||||||| |||||||| |||||||| |||||||| || || ||||    
T  19851890 ttgatagagttcacgtacaacaacagttaccattctagtattggtatggaaccgttcgaagctttgtatggtcggaggtgcaggactccattgtgttggt 19851791  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||||||||| ||||| ||||||||||| ||||| ||||||    
T  19851790 ttgagtcgggtgaaagtgtggtgttgggaccagatttagttcat 19851747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 19857926 - 19857783
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || || ||||||||||||| |||||||||||| |||||||| |||||||| |||||||| || || ||||    
T  19857926 ttgatagagttcacgtacaacaacagttaccattctagtattggtatggaaccgttcgaagctttgtatggtcggaggtgcaggactccattgtgttggt 19857827  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||||||||| ||||| ||||||||||| ||||| ||||||    
T  19857826 ttgagtcgggtgaaagtgtggtgttgggaccagatttagttcat 19857783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 20010202 - 20010345
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || || |||||||||||||||||||||||| | |||||||| |||||||||||||||||||| || ||||    
T  20010202 ttgatagagttcacgtacaacaacagttaccattcaagtattggtatggcaccgttcgaaactttgtatggtcggaggtgtaggactcctttgtgttggt 20010301  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || |||||  |||||||||| ||||| ||||||    
T  20010302 ttgagtcgggagaaagtgtgttgttgggaccagatttagttcat 20010345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 31571144 - 31571286
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || ||||| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  31571144 ttgatagagttcacctacaacaatagttatcattcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcaggactccgttgtgttggt 31571243  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    | ||||| || || ||||||||| |||||||||||||||||||    
T  31571244 tcgagtcaggagaaagtgttgtgctgggaccggatttggttca 31571286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 16877397 - 16877530
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || ||||||||||| || || |||||||| |||||||| ||||| || ||||| ||||    
T  16877397 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgcaggacaccgttatgttggt 16877496  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  16877497 ttgagtccggagagagtgctttgttaggaccgga 16877530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 21196804 - 21196937
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || |||||||| ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  21196804 ttgattgagtttacttacaacaacagttttcattctagtattggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 21196903  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    |||| || || || |||| | |||| ||||||||    
T  21196904 ttgaatccggagaaagtgctttgttaggaccgga 21196937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 20388560 - 20388449
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || ||||||||||| ||||||||||||||||| ||||||||  ||||||| || ||||| || || ||||||||||||||| | | ||    
T  20388560 aacaacagttaccattcgagtattggcatggcaccgttcgaagctttgtatggttggaggtgcagaactccgttgtgttggtttgagtcgggttaaaatg 20388461  T
Q  122 ttgtgttgggac 133  Q
    | ||||||||||    
T  20388460 tagtgttgggac 20388449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 21681856 - 21681915
Alignment:
Q  88 actcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||    
T  21681856 actcctttatgctggtttgagtcaggagagagtgttgtgttgggaccagatttggttcat 21681915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 20396454 - 20396556
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgg 130  Q
    ||||| || |||||||| |||||||| |||||||| |||||||| ||||||||||||||||| || || ||||| ||||| || |||||||| || ||||    
T  20396454 tatcattctagtattggaatggcaccattcgaagctttgtatggtcggaggtgtaggactccgttgtgttggttcgagtcaggcgagagtgtagttttgg 20396553  T
Q  131 gac 133  Q
    |||    
T  20396554 gac 20396556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 23949398 - 23949268
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || || ||||| ||||| || |||||||| |||||||| ||||||||  | ||||| ||||||||||||||||| || || ||||    
T  23949398 ttgatagagttcacgtacaataacagttatcattctagtattggaatggcacctttcgaagctctatatggtcggaggtgtaggactccgttgtgttggt 23949299  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    | ||||| ||||||||||| || ||||||||    
T  23949298 tcgagtcaggtgagagtgtagttttgggacc 23949268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 20008263 - 20008186
Alignment:
Q  70 tatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||| |||||||| | |||||||||||| |||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  20008263 tatggtcggaggtgcatgactcctttatgttggtttgagtcgggagaaagtgtggtgttgggaccagatttggttcat 20008186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 22982913 - 22982807
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||  | ||| || ||| | |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  22982913 ttgattgagtttacttacaacaacaattttcattctagtgtcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 22982814  T
Q  104 ttgagtc 110  Q
    |||||||    
T  22982813 ttgagtc 22982807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 23157313 - 23157443
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| |||||| |||| || || || |||||||| |||||||||||||| || || || ||||    
T  23157313 ttgattgagtttacttacaacaacagttttcattctagtatcggtatgacaccatttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 23157412  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||| || ||||| |||| | |||| |||||    
T  23157413 ttgaatcaggtgaaagtgctttgttaggacc 23157443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20652632 - 20652741
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||| ||||| || | ||| || ||||| |||||||||||||| || || ||||||||  ||||||||||||| || || || |    
T  20652632 cctttgattgagtttacttacaacaatagttttcattctagtatcggtatggcaccgtttgaggctttgtatggtaggaggtgtaggacaccgttgtgtt 20652731  T
Q  101 ggtttgagtc 110  Q
    ||||| ||||    
T  20652732 ggtttaagtc 20652741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 21850639 - 21850756
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || |||| |||||| || || |||||||| |||||||||||||| || || || ||||    
T  21850639 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatggtaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 21850738  T
Q  104 ttgagtcgggtgagagtg 121  Q
    ||||||| || |||||||    
T  21850739 ttgagtccggagagagtg 21850756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 16886010 - 16886054
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  16886010 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 16886054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 19485172 - 19485284
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || |||||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  19485172 ttgatcgagttcacttataataatagctatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 19485271  T
Q  104 ttgagtcgggtga 116  Q
    |||| || |||||    
T  19485272 ttgaatccggtga 19485284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 20018052 - 20018155
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| ||||||||||| ||||| || || ||||| || || ||||    
T  20018052 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggccttgtatggtcggagatgcagaactccgttgtgttggt 20018151  T
Q  104 ttga 107  Q
    ||||    
T  20018152 ttga 20018155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 22315670 - 22315558
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    |||||||||||||||||||||||||| | ||| || ||||| || ||||||||||| || || ||||||||  | |||||||| || || || || ||||    
T  22315670 ttgattgagtttacttataacaacagttttcattctagtatcggaatggcaccgtttgaggctttgtatggtagaaggtgtagaacgccattgtgttggt 22315571  T
Q  104 ttgagtcgggtga 116  Q
     |||||| |||||    
T  22315570 atgagtcaggtga 22315558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 19113169 - 19113066
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  19113169 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 19113070  T
Q  104 ttga 107  Q
    ||||    
T  19113069 ttga 19113066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 21324803 - 21324854
Alignment:
Q  96 atgctggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||||||||||| || || ||||| ||||||||||||||||||||||||    
T  21324803 atgctggtttgagtcaggagatagtgtggtgttgggaccggatttggttcat 21324854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 24126979 - 24127025
Alignment:
Q  149 atgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||    
T  24126979 atgtaacgccctagttgttatatttaattaatttgaattatgtggag 24127025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 23749035 - 23748990
Alignment:
Q  150 tgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  23749035 tgtaacgccctagttgttatatttaattaatttgaattatgtggag 23748990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 17674325 - 17674428
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || || || || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  17674325 ttgatcgagttcacttataataatagttaccattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 17674424  T
Q  104 ttga 107  Q
    ||||    
T  17674425 ttga 17674428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 19863533 - 19863403
Alignment:
Q  7 attgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttg 106  Q
    ||||||||||||||||||||||| |  || || |||||||| |||||||| || || || ||||||||  |||| ||| | || ||||| || ||||  |    
T  19863533 attgagtttacttataacaacagtttccattctagtattgggatggcaccatttgaggcgttgtatggtaggagatgtcgaacacctttgtgttggtacg 19863434  T
Q  107 agtcgggtgagagtgttgtgttgggaccgga 137  Q
    |||| || |||| ||  ||||||||||||||    
T  19863433 agtctggcgagattgcagtgttgggaccgga 19863403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 19868170 - 19868040
Alignment:
Q  7 attgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttg 106  Q
    ||||||||||||||||||||||| |  || || |||||||| |||||||| || || || ||||||||  |||| ||| | || ||||| || ||||  |    
T  19868170 attgagtttacttataacaacagtttccattctagtattgggatggcaccatttgaggcgttgtatggtaggagatgtcgaacacctttgtgttggtacg 19868071  T
Q  107 agtcgggtgagagtgttgtgttgggaccgga 137  Q
    |||| || |||| ||  ||||||||||||||    
T  19868070 agtctggcgagattgcagtgttgggaccgga 19868040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 25282609 - 25282531
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggt 82  Q
    ||||||||||||||||| |||||||| | ||| || || ||| ||||||| ||||| || || |||||||| |||||||    
T  25282609 ttgattgagtttacttacaacaacagatttcattctagcattagtatggcgccgtttgaggctttgtatggacggaggt 25282531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 1052034 - 1051989
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  1052034 tgtaacgccctagttatttatttaattaattttaaactatgtggag 1051989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 22377774 - 22377873
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    ||||| || ||||| || |||||||| |||||||| || || || ||||||||  | ||||| || |||||||| || ||||| ||||||||||||||||    
T  22377774 aacaatagttatcattctagtattggaatggcaccatttgaggc-ttgtatggaagaaggtgcagaactcctttgtgttggttcgagtcgggtgagagtg 22377872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 22383949 - 22384048
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    ||||| || ||||| || |||||||| |||||||| || || || ||||||||  | ||||| || |||||||| || ||||| ||||||||||||||||    
T  22383949 aacaatagttatcattctagtattggaatggcaccatttgaggc-ttgtatggaagaaggtgcagaactcctttgtgttggttcgagtcgggtgagagtg 22384047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 177
Target Start/End: Complemental strand, 37240998 - 37240970
Alignment:
Q  149 atgtaacgccctagttgtttatttaatta 177  Q
    |||||||||||||||||||||||||||||    
T  37240998 atgtaacgccctagttgtttatttaatta 37240970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 3264650 - 3264798
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3264650 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 3264749  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3264750 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 3264798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 44661723 - 44661870
Alignment:
Q  2 ctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44661723 ctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgctg 44661822  T
Q  102 gtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  44661823 gtttgagtcgggtgagagtgttgtgttgggaccggacttggttcatga 44661870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 29453393 - 29453541
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29453393 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 29453492  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  29453493 ggtttgagtcgggtgagagtgttgtattgggacgggatttggttcatga 29453541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 11207087 - 11207235
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11207087 cctttggttgagttcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 11207186  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11207187 ggtttgagtcgggtgagagtgttgtgttgggaccggacttggttcatga 11207235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 20891395 - 20891250
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| || |||||||| |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20891395 ttgattgagttcacatataacaatagctatcattcaagtattggtatggcaccgttcgaagctttgtatggccggaggtgtaggactcctttatgctggt 20891296  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||    
T  20891295 ttgagtcaggtgagagtgttgtgttgggaccgaatttggttcatga 20891250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 27900781 - 27900654
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||||||||||||||||||||| || ||||    
T  27900781 aacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggacttctttatgctggtttgagtcgggagaaagtg 27900682  T
Q  122 ttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||||||||||||||||||    
T  27900681 ttgtgttgggaccggatttggttcatga 27900654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 15358949 - 15359092
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||  ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  15358949 ttgatagagttcacatacaacaacagttaccattcatgtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 15359048  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  15359049 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 15359092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 1649136 - 1649281
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| ||||| |||||||| || || ||||||||||||||| ||||||||||||| |||||||| |||||||| || ||||||||||||||||    
T  1649136 ttgatagagttcacttacaacaacagttaccattcgagtattggtatgtcaccgttcgaagctttgtatggtcggaggtgcagaactcctttatgctggt 1649235  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||  | |||||||| ||||||||||||||||||||||||||    
T  1649236 ttgagtcatgagagagtgtggtgttgggaccggatttggttcatga 1649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 16146292 - 16146182
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |    
T  16146292 tcgagtattggtatggcaccgttcgaagatttgtatggtcggaggtgtaggactcctttatgctggtttgagtcaggacagagtgttgtgttgggaccag 16146193  T
Q  137 atttggttcat 147  Q
    |||||||||||    
T  16146192 atttggttcat 16146182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 15246337 - 15246194
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || ||||||||  | || ||||||||||||||||||||||||||||| |||||||| |||||||| || |||||||||| || ||    
T  15246337 ttgatagagttgacgtacaacaacagtcaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcagaactcctttattctagt 15246238  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || || ||||||||||||||||||||||||||||||    
T  15246237 ttgagtcaggagaaagtgttgtgttgggaccggatttggttcat 15246194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 15003223 - 15003366
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||||||||||||||||| |||| |||||||| |||| ||| |||||||||||||| ||||    
T  15003223 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcaaagctttgtatggtcggaagtggaggactcctttatgttggt 15003322  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||| ||||||||||| ||||| ||||||    
T  15003323 ttgagtcgggagaaagtgtggtgttgggaccagatttagttcat 15003366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 33223296 - 33223186
Alignment:
Q  39 gagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggat 138  Q
    ||||||||||||| |||| ||| |||| |||||||| |||||||| |||||||||||||||||||||||||| || |||||||| ||||||||||| ||     
T  33223296 gagtattggtatgacaccattcaaagcattgtatggtcggaggtgcaggactcctttatgctggtttgagtcaggagagagtgtggtgttgggaccagac 33223197  T
Q  139 ttggttcatga 149  Q
    |||||||||||    
T  33223196 ttggttcatga 33223186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 51606040 - 51606182
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| |||||||||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  51606040 ttgatagagttcacctacaacaacagttatcactcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcaggactccgttgtgttggt 51606139  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    ||||||| || || ||||||||| |||||||||||||||||||    
T  51606140 ttgagtcaggagaaagtgttgtgctgggaccggatttggttca 51606182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 15070826 - 15070683
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| | |||||| || ||||| || || ||||    
T  15070826 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcagaggtgcagaactccattgtgttggt 15070727  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||| ||||||||||| ||||| ||||||    
T  15070726 ttgagtcgggagaaagtgtagtgttgggaccagatttagttcat 15070683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 15078048 - 15077905
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| | |||||| || ||||| || || ||||    
T  15078048 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcagaggtgcagaactccattgtgttggt 15077949  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||| ||||||||||| ||||| ||||||    
T  15077948 ttgagtcgggagaaagtgtagtgttgggaccagatttagttcat 15077905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 15414885 - 15415015
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||| || || |||||||| |||||||| || ||||| ||||| ||||    
T  15414885 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgtttgaggctttgtatggtcggaggtgcagaactccgttatgttggt 15414984  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    ||||||||||||| |||||  ||||||||||    
T  15414985 ttgagtcgggtgaaagtgtaatgttgggacc 15415015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 14997729 - 14997598
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | |||||||||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  14997729 ttgattgagtttacttacaacaacagttttcatgctagtattggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 14997630  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccg 135  Q
    |||||||  | ||||||| | |||| ||||||    
T  14997629 ttgagtccagagagagtgctttgttaggaccg 14997598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 9291248 - 9291115
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||| ||| | ||| || ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  9291248 ttgattgagtttacttacaacagcagttttcattctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccattgtgttggt 9291149  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || || |||| | |||| ||||||||    
T  9291148 ttgagtccggagaaagtgctttgttaggaccgga 9291115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 8706331 - 8706197
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || || |||||  | ||| |||| |||||||| |||||||| |||||||| || ||| | ||||| ||||    
T  8706331 ttgatagagttcacgtacaacaacagttaccattctagtatatgaatgacaccattcgaagctttgtatggtcggaggtgcagaacttcgttatgttggt 8706232  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggat 138  Q
    ||||||||||||| ||||| |||||||||||||||    
T  8706231 ttgagtcgggtgaaagtgtagtgttgggaccggat 8706197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 15293016 - 15293149
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  15293016 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 15293115  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || || |||| | |||| ||||||||    
T  15293116 ttgagtccggagaaagtgctttgttaggaccgga 15293149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 16685666 - 16685584
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtag 86  Q
    ||||||||||||||||| |||||||| | |||  | |||||||||||||||||||| || || ||||||||  ||||||||||    
T  16685666 ttgattgagtttacttacaacaacagttttcatgctagtattggtatggcaccgtttgaggctttgtatggaaggaggtgtag 16685584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 8053222 - 8053298
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggag 80  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| ||||||||||| |||||    
T  8053222 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggccttgtatggtcggag 8053298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 50083557 - 50083513
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  50083557 tgtaacgccccagttgtttatttaattaatttgaattatgtggag 50083513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 12477013 - 12476910
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  12477013 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 12476914  T
Q  104 ttga 107  Q
    ||||    
T  12476913 ttga 12476910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 18297618 - 18297515
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  18297618 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 18297519  T
Q  104 ttga 107  Q
    ||||    
T  18297518 ttga 18297515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 23956160 - 23956057
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || || || || |||||||| |||||||||||||| ||||||||||| ||||| || || ||||| || || ||||    
T  23956160 ttgatcgagttcacttataataatagttaccattctagtattggaatggcaccgttcgaggccttgtatggtcggagatgcagaactccgttgtgttggt 23956061  T
Q  104 ttga 107  Q
    ||||    
T  23956060 ttga 23956057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 29039003 - 29039106
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  29039003 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 29039102  T
Q  104 ttga 107  Q
    ||||    
T  29039103 ttga 29039106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 12342722 - 12342804
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtag 86  Q
    ||||||||||||||||| |||||||  | ||| || |||||||| ||||||||||| || || ||||||||  ||||||||||    
T  12342722 ttgattgagtttacttacaacaacaattttcattctagtattgggatggcaccgtttgaggctttgtatggttggaggtgtag 12342804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 55375217 - 55375347
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| |  || || ||||| || ||||||||||| || || ||||||||  ||||||||||||| |  || || ||||    
T  55375217 ttgattgagtttacttacaacaacagtttacattctagtatcggaatggcaccgtttgaggctttgtatggtaggaggtgtaggacactgttgtgttggt 55375316  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||| || ||||| |||| | |||| |||||    
T  55375317 ttgaatcaggtgaaagtgctttgttaggacc 55375347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 677750 - 677705
Alignment:
Q  150 tgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  677750 tgtaacgccctagttgttatatttaattaatttgaattatgtggag 677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 13248058 - 13247925
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || |||||| | ||||| ||||| || || ||||||||  |||||||||| || || || || ||||    
T  13248058 ttgattgagtttacttacaacaacagttttcattctagtattaggatggctccgtttgaggctttgtatggtaggaggtgtagaacaccgttgtgttggt 13247959  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    |||| || || || |||| | |||| ||||||||    
T  13247958 ttgaatccggagaaagtgctttgttaggaccgga 13247925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 14266522 - 14266610
Alignment:
Q  28 agctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    |||||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  14266522 agctatcattccagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 14266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 44656513 - 44656557
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||    
T  44656513 tgtaacgccctagttatttatttaattaatttggattatgtggag 44656557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 44662432 - 44662476
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||    
T  44662432 tgtaacgccctagttatttatttaattaatttggattatgtggag 44662476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 8386825 - 8386722
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| ||||| ||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  8386825 ttgatcgagttcacatataataatagttatcattctagtattggaatggcgccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 8386726  T
Q  104 ttga 107  Q
    ||||    
T  8386725 ttga 8386722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 19778392 - 19778495
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || || || || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  19778392 ttgatcgagttcacttataataatagttaccattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 19778491  T
Q  104 ttga 107  Q
    ||||    
T  19778492 ttga 19778495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 27711749 - 27711646
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| ||||||||||||||  | |||||||| ||||| || || ||||| || || ||||    
T  27711749 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgagactttgtatggtcggagatgcagaactccgttgtgttggt 27711650  T
Q  104 ttga 107  Q
    ||||    
T  27711649 ttga 27711646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 3096375 - 3096425
Alignment:
Q  145 catgatgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    |||||||||||||||||||  ||||||||||||| ||| ||||||||||||    
T  3096375 catgatgtaacgccctagtgatttatttaattaattttaaactatgtggag 3096425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 14159878 - 14159772
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgg 130  Q
    ||||| || |||||||| |||||||| || || || ||||| || ||||| || || ||||| || || ||||||||||| ||||||| ||| || ||||    
T  14159878 tatcattctagtattggaatggcaccttttgaggctttgtacggtcggagatgcagaactccgttgtgttggtttgagtcaggtgagaatgtggttttgg 14159779  T
Q  131 gaccgga 137  Q
    |||||||    
T  14159778 gaccgga 14159772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 18864831 - 18864761
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatgg 74  Q
    |||||||| ||| | ||||||||||| |||||||| ||||| || ||||| |||| |||||| ||||||||    
T  18864831 ttgattgaatttgcctataacaacagttatcactctagtataggcatggccccgtacgaagctttgtatgg 18864761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 3265363 - 3265408
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttga-actatgtggag 194  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||    
T  3265363 tgtaacgccctagttatttatttaattaattttatactatgtggag 3265408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 6457488 - 6457533
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatt-tgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||||    
T  6457488 tgtaacgccctagttatttatttaattaattgtaaactatgtggag 6457533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 12524062 - 12523977
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  12524062 tatcattctagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 12523977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 49239591 - 49239636
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttga-actatgtggag 194  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||    
T  49239591 tgtaacgccctagttatttatttaattaattttatactatgtggag 49239636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 49748305 - 49748350
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttga-actatgtggag 194  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||    
T  49748305 tgtaacgccctagttatttatttaattaattttatactatgtggag 49748350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 51930923 - 51930968
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  51930923 tgtaacgccctagttatttatttaattaattttaaactatgtggag 51930968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 177
Target Start/End: Complemental strand, 52501884 - 52501855
Alignment:
Q  148 gatgtaacgccctagttgtttatttaatta 177  Q
    ||||||||||||||||||||||||||||||    
T  52501884 gatgtaacgccctagttgtttatttaatta 52501855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 14303613 - 14303689
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  14303613 agtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 14303689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 4e-74; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 26118448 - 26118596
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26118448 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 26118547  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26118548 ggtttgagtcgggtgaaagtgttgtgttgggaccggatttggttcatga 26118596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 8211971 - 8212119
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  8211971 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcgccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 8212070  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8212071 ggtttgagtcgggtgagagtgttgtattgggaccggatttggttcatga 8212119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 11306106 - 11306254
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11306106 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 11306205  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  11306206 ggtttgagtcgggtgaaagtattgtgttgggaccggatttagttcatga 11306254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 49152707 - 49152559
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  49152707 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcctttatgct 49152608  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  49152607 ggtttgagtcgggtgaaagtgttgtgttgggaccggatttggtgcatga 49152559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 13968511 - 13968659
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  13968511 cctttgattgggttcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtatgactcctttatgct 13968610  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13968611 ggtttgagtcgggtgagagtgttgtgttgggaccggatttagttcatga 13968659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 12457182 - 12457037
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||    
T  12457182 ttgattgagttcacatataacaacagctatcactcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtataggactcctttatgctagt 12457083  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| || |||||||| |||||||||||||| |||||||||||    
T  12457082 ttgagtcaggagagagtgtggtgttgggaccggacttggttcatga 12457037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 16950317 - 16950460
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  16950317 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 16950416  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||    
T  16950417 ttgagtcaggtgagagtgttgtgttgggacaggacttggttcat 16950460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 1253 - 1396
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||||||||||||||||| |||| |||||||| | |||||| |||||||||||||||||||    
T  1253 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcaaagctttgtatggtcagaggtgaaggactcctttatgctggt 1352  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  1353 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 1396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 14286222 - 14286365
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  14286222 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgcaggactcctttgtgctggt 14286321  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||    |||||||||||||||||||||||||||||||||    
T  14286322 ttgagtcaatagagagtgttgtgttgggaccggatttggttcat 14286365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 13021760 - 13021615
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||||| ||||||||| |||| ||||    
T  13021760 ttgatagagttcacttataacaacagctatcattcgagtattggtatggcaccgttcgaggctttgtatggtcggaggtgcaggactcctctatgttggt 13021661  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| ||  ||||||| ||||| |||||||| |||||||||||    
T  13021660 ttgagtcaggaaagagtgtggtgttaggaccggacttggttcatga 13021615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 14130276 - 14130131
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||    
T  14130276 ttgatagagttcacctacaacaacagttaccattcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactccgttatgctggt 14130177  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| || |||||||| ||||||||||||||||||||||||||    
T  14130176 ttgagtcaggagagagtgtggtgttgggaccggatttggttcatga 14130131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 14434094 - 14433949
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||    
T  14434094 ttgatagagttcacctacaacaacagttaccattcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactccgttatgctggt 14433995  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| || |||||||| ||||||||||||||||||||||||||    
T  14433994 ttgagtcaggagagagtgtggtgttgggaccggatttggttcatga 14433949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 19147614 - 19147471
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||    
T  19147614 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgttggt 19147515  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||| ||||||||||| ||||||||||||    
T  19147514 ttgagtcgggagaaagtgtagtgttgggaccagatttggttcat 19147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 6413914 - 6413771
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || || ||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  6413914 ttgatagagttcacatacaataacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 6413815  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||| || || ||||||||||||||||| | |||||||||||||    
T  6413814 ttgaatcaggagagagtgttgtgttgggtctggatttggttcat 6413771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 14264090 - 14264233
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||    
T  14264090 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgttggt 14264189  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || || ||||| |||||||||||| |||||||||||    
T  14264190 ttgagtcaggagaaagtgtagtgttgggaccgtatttggttcat 14264233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 20747013 - 20746870
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||    
T  20747013 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgttggt 20746914  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||| ||||||||||| ||||| ||||||    
T  20746913 ttgagtcgggagaaagtgtagtgttgggaccagatttagttcat 20746870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 12456072 - 12455960
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    |||||||| ||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||    
T  12456072 tcgagtataggtatggtaccgttcgaagctttgtatggtaggaggtgtaggactcctttatgctggtttgagtcaggagagagtgtggtgttgggaccgg 12455973  T
Q  137 atttggttcatga 149  Q
    | ||||| |||||    
T  12455972 acttggtacatga 12455960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 15340834 - 15340691
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||  || || |||||||| |||||||||||||||||||  |||||||| |||||||| |||||||| ||||||| ||    
T  15340834 ttgatagagttcacctacaacaacatttaccattcgagtataggtatggcaccgttcgaagttttgtatggtcggaggtgcaggactccgttatgctagt 15340735  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  15340734 ttgagtcaggagagagtgttgtattgggaccggatttggttcat 15340691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 15102449 - 15102590
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| || ||||    
T  15102449 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttgtgttggt 15102548  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    | ||||| || ||||||||  ||||||||||||||||| |||||    
T  15102549 tcgagtcaggagagagtgt--tgttgggaccggatttgattcat 15102590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 13665940 - 13665813
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||| | | |||||||||||||||||    
T  13665940 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggggcatgactcctttatgctggt 13665841  T
Q  104 ttgagtcgggtgagagtgttgtgttggg 131  Q
    ||||||| || |||||| ||||||||||    
T  13665840 ttgagtcaggagagagttttgtgttggg 13665813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 23199589 - 23199728
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| || ||||| || || ||||    
T  23199589 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcagaactccgttgtgttggt 23199688  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggt 143  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  23199689 ttgagtcgggagaaagtgttgtgttgggaccggatttggt 23199728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 23505716 - 23505855
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| || ||||| || || ||||    
T  23505716 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcagaactccgttgtgttggt 23505815  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggt 143  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  23505816 ttgagtcgggagaaagtgttgtgttgggaccggatttggt 23505855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 16072140 - 16072281
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||||||||||||| |||||||| |||||||| |||||| | |  ||||||||||| ||||    
T  16072140 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccattcgaagctttgtatggtcggaggcgcataactcctttatgttggt 16072239  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttc 145  Q
    ||||||| || || ||||| ||||||||||| ||||||||||    
T  16072240 ttgagtcaggagaaagtgtagtgttgggaccagatttggttc 16072281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 12206646 - 12206780
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || ||||| || || || ||||||||||||||||||||||||||||  |||||||  |||||||| |  ||||| ||||| ||||    
T  12206646 ttgatagagttcacgtacaacaatagttaccattcgagtattggtatggcaccgttcgaagttttgtatgatcggaggtgcaatactccgttatgttggt 12206745  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggat 138  Q
    ||||||||||||| |||||  ||||||||||||||    
T  12206746 ttgagtcgggtgaaagtgtaatgttgggaccggat 12206780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 18053799 - 18053941
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| ||  |||| |||||||| || || ||||    
T  18053799 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcaccattcgaagctttgtatggtcgagggtgcaggactccgttgtgttggt 18053898  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    | ||||| || || || ||||||||||||||||||||||||||    
T  18053899 tcgagtcaggagaaagagttgtgttgggaccggatttggttca 18053941  T

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Target: chr7; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 11388274 - 11388404
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || ||||| || || || ||||||||||||||| ||||||||||||| |||||||  || ||||| || |||||||| || ||||    
T  11388274 ttgatagagttcacatacaacaatagttaccattcgagtattggtatgacaccgttcgaagctttgtatgttcgaaggtgcagaactcctttgtgttggt 11388373  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||||||| || |||||  ||||||||||    
T  11388374 ttgagtcgggagaaagtgtgatgttgggacc 11388404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 12193958 - 12193846
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| |  |||||  ||||| ||||||| ||||| |||||||| ||||||||||| |||||||| || ||||    
T  12193958 ttgattgagtttacttacaacaacagttttcattaaagtatcagtatgacaccgtttgaagctttgtatggtcggaggtgtagaactcctttgtgttggt 12193859  T
Q  104 ttgagtcgggtga 116  Q
     |||||| |||||    
T  12193858 atgagtcaggtga 12193846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 23516637 - 23516749
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || |||||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || ||| |||    
T  23516637 ttgatcgagttcacttataataatagctatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgccggt 23516736  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  23516737 ttgagtcaggtga 23516749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 7824302 - 7824199
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  7824302 ttgattgagtttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 7824203  T
Q  104 ttga 107  Q
    ||||    
T  7824202 ttga 7824199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 27107642 - 27107745
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  27107642 ttgattgagtttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 27107741  T
Q  104 ttga 107  Q
    ||||    
T  27107742 ttga 27107745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 14936749 - 14936664
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggac 89  Q
    ||||||||||||||||| |||||||| | ||| || ||||| || ||||||||||| || || |||||||| ||||||||||||||    
T  14936749 ttgattgagtttacttacaacaacagttttcattctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggac 14936664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 15364342 - 15364257
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggac 89  Q
    ||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| ||||||||||||||    
T  15364342 ttgattgagtttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggac 15364257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 21674401 - 21674534
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    |||||||| |||||||| |||||||| | ||| || ||||| |||||||||||||| || || |||||||| |||||||||| |||  | || || ||||    
T  21674401 ttgattgaatttacttacaacaacagttttcattctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaagacaacgttgtgttggt 21674500  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || || |||| | |||| ||||||||    
T  21674501 ttgagtcaggagaaagtgctttgttaggaccgga 21674534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 13596013 - 13595969
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  13596013 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 13595969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 14332799 - 14332696
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| ||||||||||| ||||| || || ||||| || || ||||    
T  14332799 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggccttgtatggtcggagatgcagaactccgttgtgttggt 14332700  T
Q  104 ttga 107  Q
    ||||    
T  14332699 ttga 14332696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 45146957 - 45146826
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| |  || || ||||| |||||| ||||||| || ||  ||||||| |||||||||||||| || || || ||||    
T  45146957 ttgattgagtttacttacaacaacagtttgcattctagtatcggtatgacaccgttggaggctctgtatggtcggaggtgtaggacgccattgtgttggt 45146858  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccg 135  Q
    |||| || ||||| |||| | |||| ||||||    
T  45146857 ttgaatcaggtgaaagtgctttgttaggaccg 45146826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 15624954 - 15624836
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || || ||||| ||||| || |||||| | ||| |||| ||||||||  ||||||| ||||||||||||||||| || || ||||    
T  15624954 ttgatagagttcacgtacaataacagttatcattctagtattagaatgacaccattcgaagcactgtatggtcggaggtgtaggactccattgtgttggt 15624855  T
Q  104 ttgagtcgggtgagagtgt 122  Q
    | ||||| |||||||||||    
T  15624854 tcgagtcaggtgagagtgt 15624836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 35964718 - 35964824
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| ||||| || || || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  35964718 ttgatcgagttcacttataataacagttaccattctagtattggaatggcaccgttcgaagcgttgtatggtcggagatgcagaactccgttgtgttggt 35964817  T
Q  104 ttgagtc 110  Q
     ||||||    
T  35964818 atgagtc 35964824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 32628763 - 32628727
Alignment:
Q  147 tgatgtaacgccctagttgtttatttaattaatttga 183  Q
    |||||||||||||||||||||||||||||||||||||    
T  32628763 tgatgtaacgccctagttgtttatttaattaatttga 32628727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 8199030 - 8198927
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  8199030 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 8198931  T
Q  104 ttga 107  Q
    ||||    
T  8198930 ttga 8198927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 10871397 - 10871294
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  10871397 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 10871298  T
Q  104 ttga 107  Q
    ||||    
T  10871297 ttga 10871294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 12368442 - 12368529
Alignment:
Q  2 ctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggac 89  Q
    ||||||||||||||||||| ||||| |  | ||| || |||||||||||||| || || || || |||||||| ||||||||||||||    
T  12368442 ctttgattgagtttacttacaacaaaaaatttcattctagtattggtatggctccatttgaggctttgtatggtcggaggtgtaggac 12368529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 18551626 - 18551729
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| |||||||| || || || || || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  18551626 ttgattgagttcacttataataatagttaccattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 18551725  T
Q  104 ttga 107  Q
    ||||    
T  18551726 ttga 18551729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 44791219 - 44791322
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  44791219 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 44791318  T
Q  104 ttga 107  Q
    ||||    
T  44791319 ttga 44791322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 15204281 - 15204139
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || || ||||| ||||| || |||||||| |||| ||| || |||||  ||||||| | ||||||||||||||| || || ||||    
T  15204281 ttgatagagttcacgtacaataacagttatcattctagtattggaatggaaccatttgaagcgctgtatggtcagaggtgtaggactccgttgtgttggt 15204182  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    | ||||  ||||| ||||| || |||||||| ||||| |||||    
T  15204181 tcgagtaaggtgatagtgtagttttgggaccagattttgttca 15204139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 40921678 - 40921723
Alignment:
Q  149 atgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||    
T  40921678 atgtaacgccctagttatttatttaattattttaaactatgtggag 40921723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 17924065 - 17923985
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgt 84  Q
    |||||| |||||||||| |||||||| | ||| || ||||| |||||||||||||| || ||  ||||||| |||||||||    
T  17924065 ttgattaagtttacttacaacaacagttttcattctagtatcggtatggcaccgtttgaggctctgtatggtcggaggtgt 17923985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 8195979 - 8196026
Alignment:
Q  148 gatgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  8195979 gatgtaacgccctagttatttatttaattaattttaaactatgtggag 8196026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 8708007 - 8707904
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || || || || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  8708007 ttgatcgagttcacttataataatagttaccattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 8707908  T
Q  104 ttga 107  Q
    ||||    
T  8707907 ttga 8707904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 48986702 - 48986748
Alignment:
Q  149 atgtaacgccctagttgtttatttaattaatttga-actatgtggag 194  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||    
T  48986702 atgtaacgccctagttatttatttaattaattttatactatgtggag 48986748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 751232 - 751187
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttga-actatgtggag 194  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||    
T  751232 tgtaacgccctagttatttatttaattaattttatactatgtggag 751187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 8212684 - 8212729
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  8212684 tgtaacgccctagttatttatttaattaattttaaactatgtggag 8212729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 15160952 - 15161037
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  15160952 tatcattcaagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 15161037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 18178120 - 18178032
Alignment:
Q  28 agctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    |||||||| || |||||||| |||||||| || || || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  18178120 agctatcattctagtattggaatggcaccttttgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 18178032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 4e-74; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 14887029 - 14887177
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14887029 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 14887128  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  14887129 ggtttgagtcgggtgaaagtgttgtgttgggaccggatttggtgcatga 14887177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25848405 - 25848257
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25848405 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 25848306  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25848305 ggtttgagtcgggtgagagtgttgtgttgggaccggacttggttcatga 25848257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 24798435 - 24798580
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24798435 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 24798534  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||    
T  24798535 ggtttgagtcgggtgaaagtgttgtgttgggactggatttggttca 24798580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 20342612 - 20342464
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20342612 cctttgattgagttcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 20342513  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
     |||||||||||||||||||||||||||||||||||| |||||||||||    
T  20342512 agtttgagtcgggtgagagtgttgtgttgggaccggacttggttcatga 20342464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 37545534 - 37545682
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  37545534 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcactgttcgaagccttgtatggtcggaggtgcaggactcctttatgct 37545633  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  37545634 ggtttgagtcgggtgaaagtgttgtgttgggaccggatttggtacatga 37545682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 22503006 - 22502861
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  22503006 ttgattgagttcacttataacaacagctatcactcgagtattggcatggcaccgttcgaagccttgtatggtcggaggtgtaagactcctttatgctggt 22502907  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||||||||||||||||||||| || |||||||||||    
T  22502906 ttgagtcgggtgagagtgttgtgttgggaccagacttggttcatga 22502861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 22381526 - 22381381
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||    
T  22381526 ttgattgagttcacatataacaacagctatcactcgagtataggtatggcactattcgaagctttgtatggtcggaggtgtaggactcctttatgctggt 22381427  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  22381426 ttgagtcaggtgagagtgttgtgttgggaccggatttggttcatga 22381381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 23080130 - 23080275
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||| |||||||||    
T  23080130 ttgatagagttcacatataacaacagctatcactcgagtattggtatggcaccgttcgaagctttatatggtcggaggtgcaggactcctctatgctggt 23080229  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| || |||||||| ||||||||||| || ||||| |||||    
T  23080230 ttgagtcaggagagagtgtggtgttgggaccagacttggtgcatga 23080275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 22462279 - 22462134
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| || ||||| || |||||||| || || |||||| |||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  22462279 ttgatagaatttacatacaacaacagttaccattcgagtgttggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 22462180  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    | |||||||| || |||||||||||||| ||||| |||||||||||    
T  22462179 tcgagtcgggagaaagtgttgtgttggggccggaattggttcatga 22462134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 22235979 - 22236104
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || |||||||||||||||||| |||||||||| |||||||| |||||||| | ||||||||||| |||||||||||| || |||||||    
T  22235979 aacaacagttaccattcgagtattggtatggcatcgttcgaagctttgtatggtcggaggtgcaagactcctttattctggtttgagtcaggagagagtg 22236078  T
Q  122 ttgtgttgggaccggatttggttcat 147  Q
    |||||||||||||||| |||||||||    
T  22236079 ttgtgttgggaccggagttggttcat 22236104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 24749595 - 24749725
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  24749595 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 24749694  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||||||| || |||||  ||||||||||    
T  24749695 ttgagtcgggagaaagtgtgatgttgggacc 24749725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 20821762 - 20821635
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| ||||| || ||||||||||||||||| || ||||| || ||||| |||| ||||||||||||| |||| |||||||||||||| || ||||    
T  20821762 aacaacagttatcattcaagtattggtatggcaccatttgaagctttatatggtcggaagtgtaggactcctctatgttggtttgagtcgggagaaagtg 20821663  T
Q  122 ttgtgttgggaccggatttggttcatga 149  Q
    |||||||||| |||||||||||||||||    
T  20821662 ttgtgttggggccggatttggttcatga 20821635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 28895001 - 28895128
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || |||||||||||||||||||| |||||||| || ||||| |||| ||||||||||||| |||| ||||| |||||||| || ||||    
T  28895001 aacaacagttaccattcgagtattggtatggcaccattcgaagctttatatggtcggaagtgtaggactcctctatgttggttcgagtcgggagaaagtg 28895100  T
Q  122 ttgtgttgggaccggatttggttcatga 149  Q
    |||| |||||||||||||||||||||||    
T  28895101 ttgttttgggaccggatttggttcatga 28895128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 28923827 - 28923954
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || |||||||||||||||||||| |||||||| || ||||| |||| ||||||||||||| |||| ||||| |||||||| || ||||    
T  28923827 aacaacagttaccattcgagtattggtatggcaccattcgaagctttatatggtcggaagtgtaggactcctctatgttggttcgagtcgggagaaagtg 28923926  T
Q  122 ttgtgttgggaccggatttggttcatga 149  Q
    |||| |||||||||||||||||||||||    
T  28923927 ttgttttgggaccggatttggttcatga 28923954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 24735670 - 24735782
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||  || ||||    
T  24735670 aacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggtttgagtcggaagaaagtg 24735769  T
Q  122 ttgtgttgggacc 134  Q
    |  ||||||||||    
T  24735770 tgatgttgggacc 24735782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 21890800 - 21890943
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||  | |||||| ||||| ||||    
T  21890800 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtacaagactccattatgttggt 21890899  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||| ||||||||| | ||||||||||||    
T  21890900 ttgagtcgggagaaagtgtagtgttgggaacagatttggttcat 21890943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 17269374 - 17269516
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  17269374 ttgatagagttcacctacaacaacagttaccattcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcaggactccgttgtgttggt 17269473  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    ||||||| || ||||||||||||||||||||||||||||||||    
T  17269474 ttgagtcaggagagagtgttgtgttgggaccggatttggttca 17269516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 20774069 - 20773942
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || |||||||||||||||||||| |||||||| || ||||| |||| ||||| |||||||||||| ||||| |||||||| || | ||    
T  20774069 aacaacagttaccattcgagtattggtatggcaccattcgaagctttatatggtcggaagtgtaagactcctttatgttggttcgagtcgggagaaaatg 20773970  T
Q  122 ttgtgttgggaccggatttggttcatga 149  Q
    |||| ||||||||||| |||||||||||    
T  20773969 ttgttttgggaccggaattggttcatga 20773942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 11210735 - 11210868
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| ||||| || | ||| || |||||||| ||| ||||||| || |||||||||||  |||||||||||||  | || || ||||    
T  11210735 ttgattgagtttacttacaacaatagttttcattctagtattggaatgacaccgtttgaggccttgtatggtaggaggtgtaggacatcgttgtgttggt 11210834  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||||| |||| ||||||||    
T  11210835 ttgagtccggagagagtgttttgttaggaccgga 11210868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 21564014 - 21564119
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||| ||||||||||||| |||||||| |||||||| || ||||| ||||| ||||    
T  21564014 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatgacaccgttcgaagctttgtatggtcggaggtgcagaactccgttatgttggt 21564113  T
Q  104 ttgagt 109  Q
    ||||||    
T  21564114 ttgagt 21564119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 24581538 - 24581405
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  24581538 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 24581439  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  24581438 ttgagtccggagagagtgctttgttaggaccgga 24581405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 21831820 - 21831918
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggat 138  Q
    ||||| || ||| |||| || ||||| |||||||| |||||||| || ||||| ||||| |||||||||||||||||| |||| |||||||||||||||    
T  21831820 agtataggaatgacaccatttgaagctttgtatggtcggaggtgcagaactccgttatgttggtttgagtcgggtgagggtgtagtgttgggaccggat 21831918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 24009392 - 24009348
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24009392 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 24009348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 1069 - 1148
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtg 83  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  1069 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtg 1148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 21937229 - 21937332
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  21937229 ttgattgagtttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 21937328  T
Q  104 ttga 107  Q
    ||||    
T  21937329 ttga 21937332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 20468137 - 20468267
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || || ||||| ||||| || |||||||| |||||||| || |||||  || |||| ||||||||||||||||| || || ||||    
T  20468137 ttgatagagttcacgtacaataacagttatcattctagtattggaatggcaccatttgaagctctgcatggtcggaggtgtaggactccgttgtgttggt 20468236  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    | ||||| ||||||||||| || ||||||||    
T  20468237 tcgagtcaggtgagagtgtagttttgggacc 20468267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 23442415 - 23442477
Alignment:
Q  85 aggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||||||| ||||||||| |||| || ||||| ||||||||||||||||||||||||    
T  23442415 aggactcctttatgttggtttgagacgggagaaagtgtagtgttgggaccggatttggttcat 23442477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 10687481 - 10687437
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  10687481 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 10687437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 40009747 - 40009791
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  40009747 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 40009791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 15462837 - 15462790
Alignment:
Q  147 tgatgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  15462837 tgatgtaacgccctagttatttatttaattaatttgaattatgtggag 15462790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 23471553 - 23471447
Alignment:
Q  25 aacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttg 124  Q
    ||||||||||| || |||||||| |||||||| || || || |||||||| ||||| || || ||||| || || ||||||||||| ||||||||||| |    
T  23471553 aacagctatcattctagtattggaatggcaccttttgatgctttgtatggtcggagatgcagaactccgttgtgttggtttgagtcaggtgagagtgtag 23471454  T
Q  125 tgttggg 131  Q
    | |||||    
T  23471453 ttttggg 23471447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 21339348 - 21339445
Alignment:
Q  25 aacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgt 122  Q
    ||||| ||||| || |||||||| |||||||| ||||| || |||||||| ||||| || || ||||| || || ||||||||||| |||||||||||    
T  21339348 aacagttatcattctagtattggaatggcaccattcgaggctttgtatggtcggagatgcagaactccgttgtgttggtttgagtcaggtgagagtgt 21339445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 27011411 - 27011278
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || ||| |||| || || || |||||||| |||||||||||||| || || || ||||    
T  27011411 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatgacaccatttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 27011312  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||  || ||||||| | |||| ||||||||    
T  27011311 ttgagttcggagagagtgctttgttaggaccgga 27011278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 43030387 - 43030343
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  43030387 tgtaacgctctagttgtttatttaattaatttgaattatgtggag 43030343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 16356847 - 16356744
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  16356847 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 16356748  T
Q  104 ttga 107  Q
    ||||    
T  16356747 ttga 16356744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 19770305 - 19770202
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  19770305 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 19770206  T
Q  104 ttga 107  Q
    ||||    
T  19770205 ttga 19770202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 20348490 - 20348443
Alignment:
Q  148 gatgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  20348490 gatgtaacgccctagttgttatatttaattaatttgaattatgtggag 20348443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 27610699 - 27610596
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  27610699 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 27610600  T
Q  104 ttga 107  Q
    ||||    
T  27610599 ttga 27610596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 27668531 - 27668634
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  27668531 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 27668630  T
Q  104 ttga 107  Q
    ||||    
T  27668631 ttga 27668634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 34566839 - 34566736
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  34566839 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 34566740  T
Q  104 ttga 107  Q
    ||||    
T  34566739 ttga 34566736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 40709125 - 40709022
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  40709125 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 40709026  T
Q  104 ttga 107  Q
    ||||    
T  40709025 ttga 40709022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 20341899 - 20341854
Alignment:
Q  150 tgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  20341899 tgtaacgccctagttgttatatttaattaatttgaattatgtggag 20341854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 21229232 - 21229305
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactccttt 95  Q
    |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| || || || |||||||||||    
T  21229232 aacaacagttatcattcgagtataggaatggcaccattcgaagcattgtatggtcgcagatgcaggactccttt 21229305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 22348741 - 22348656
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| |||||||| || ||||| || |||||||||||||| |||||    
T  22348741 tatcattctagtattggaatggcacctttcgaggctttatatggtcggaggtgcagaactccgttgtgctggtttgagtcaggtga 22348656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 23503770 - 23503637
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||| | |||||||  | ||| || ||| | |||||||| |||||  | || |||||||| ||||||| |||||| || || || ||||    
T  23503770 ttgattgagtttactaacaacaacaattttcattctagtgtcggtatggctccgtttaaggctttgtatggtcggaggtctaggacaccgttgtgttggt 23503671  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| ||||| |||| | |||| ||||||||    
T  23503670 ttgagtctggtgaaagtgctttgttaggaccgga 23503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 38015046 - 38015002
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  38015046 tgtaacgccctagttatttatttaattattttaaactatgtggag 38015002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 27518752 - 27518649
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || ||||||||  |||| || || ||||| || || ||||    
T  27518752 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggttggagatgcagaactccgttgtgttggt 27518653  T
Q  104 ttga 107  Q
    ||||    
T  27518652 ttga 27518649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 41771175 - 41771084
Alignment:
Q  16 acttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttga 107  Q
    |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||||||    
T  41771175 acttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggtttga 41771084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 19509474 - 19509428
Alignment:
Q  149 atgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||    
T  19509474 atgtaacgccctagttgttatatttaattaatttgatttatgtggag 19509428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 1110444 - 1110489
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  1110444 tgtaacgccctagttatttatttaattaattttaaactatgtggag 1110489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 21405167 - 21405106
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagc 65  Q
    ||||| ||||| |||||||| ||||| || || || |||||||| |||||||||||||||||    
T  21405167 ttgatcgagttcacttataataacagttaccattctagtattggaatggcaccgttcgaagc 21405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 22246995 - 22247040
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  22246995 tgtaacgccctagttatttatttaattaatttttaactatgtggag 22247040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 22332955 - 22333040
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  22332955 tatcattcaagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 22333040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 27685468 - 27685553
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| ||| |||| ||||| ||||| ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  27685468 tatcattcaagtattggaatgacacctttcgaggccttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 27685553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 29476141 - 29476226
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  29476141 tatcattcaagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 29476226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 37291564 - 37291649
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  37291564 tatcattctagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 37291649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 4e-74; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 11358270 - 11358418
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11358270 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 11358369  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11358370 ggtttgagtcgggtgagagtgttgtgttgggaccggacttggttcatga 11358418  T

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Target: chr2; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 20833032 - 20832884
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20833032 cctttgattgaattcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 20832933  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20832932 ggtttgagtcgggtgagagtgttgtattgggaccggatttggttcatga 20832884  T

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Target: chr2; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 31830705 - 31830557
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31830705 cctttgattgaatttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 31830606  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  31830605 ggtttgagtcgggtgaaagtgttgtgttgggaccggatttggtgcatga 31830557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 1063798 - 1063650
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1063798 cctttgattgagtttacttataacaacagctatcattcaagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 1063699  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  1063698 ggtttgagtcgtgtgagagtgttgtgttgggaccagatttggtacatga 1063650  T

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Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 23276820 - 23276677
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| ||||||||||||||||||||||||||||| |||||||| |||||||| |||||| ||||||||||||    
T  23276820 ttgatagagttcacgtacaacaacagttatcattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggacttctttatgctggt 23276721  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  23276720 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 23276677  T

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Target: chr2; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 23294002 - 23293859
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||  ||||||||||||||  |||    
T  23294002 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggttgaggactcctttatgtcggt 23293903  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  23293902 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 23293859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 19652467 - 19652578
Alignment:
Q  23 acaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgt 122  Q
    ||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| || ||||||||    
T  19652467 acaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggtttgagtcaggagagagtgt 19652566  T
Q  123 tgtgttgggacc 134  Q
    ||||||||||||    
T  19652567 tgtgttgggacc 19652578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20828306 - 20828226
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggagg 81  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20828306 cctttgattgaattcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggagg 20828226  T

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Target: chr2; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 27787785 - 27787643
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| |||||||||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  27787785 ttgatagagttcacctacaacaacagttatcactcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcaggactccgttgtgttggt 27787686  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    ||||||| || || ||||||||| |||||||||||||||||||    
T  27787685 ttgagtcaggagaaagtgttgtgctgggaccggatttggttca 27787643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 27365478 - 27365608
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||||||||| ||||| || || || ||||||||||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||    
T  27365478 ttgatagagtttacttacaacaatagttaccattcgagtattggtatggcaccgtttgaagccttgtatggacgaaggtgcagaactcctttgtgttggt 27365577  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||||||| || |||||  ||||||||||    
T  27365578 ttgagtcgggagaaagtgtgatgttgggacc 27365608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 25128691 - 25128558
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| |||||| ||||||| || || |||||||| |||||||||||||| || ||||| ||||    
T  25128691 ttgattgagtttacttacaacaacagttttcattcaagtatcggtatgacaccgtttgatgctttgtatggtcggaggtgtaggacgccgttatgttggt 25128592  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||||||||| |||||| |||| ||| ||||    
T  25128591 ttgagtcgggtgaaagtgttttgttaggatcgga 25128558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 12574397 - 12574255
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  12574397 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcaggactccgttgtgttggt 12574298  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    | |||||  | || |||||||||||||||||||||||||||||    
T  12574297 tcgagtcaagagaaagtgttgtgttgggaccggatttggttca 12574255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 12640318 - 12640451
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| |||||||||||||| || ||||| ||||    
T  12640318 ttgattgagtttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttatgttggt 12640417  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  12640418 ttgagtccggagagagtgctttgttaggaccgga 12640451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 23087494 - 23087364
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||| ||||||||||||||| |||||||| |||||||| ||||||||  | ||||| ||||| ||||    
T  23087494 ttgatagagttcacgtacaacaacagttaccattcgactattggtatggcaccattcgaagctttgtatggtcggaggtgcggaactccgttatgttggt 23087395  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    ||||||||||||| |||||  ||||||||||    
T  23087394 ttgagtcgggtgaaagtgtaatgttgggacc 23087364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 22276323 - 22276206
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  22276323 ttgattgagtttacttacaacaacagttttcattctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 22276224  T
Q  104 ttgagtcgggtgagagtg 121  Q
    ||||||| || |||||||    
T  22276223 ttgagtccggagagagtg 22276206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 22761968 - 22762053
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggac 89  Q
    ||||||||||||||||| |||||||| | ||| || ||||| |||||||||||||| ||||| |||||||| ||||||||||||||    
T  22761968 ttgattgagtttacttacaacaacagttttcattctagtatcggtatggcaccgtttgaagctttgtatggtcggaggtgtaggac 22762053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 23817452 - 23817558
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| |||||||||||||| || || |||||||| ||||| |||||||| || || || ||||    
T  23817452 ttgattgagtttacttacaacaacagttttcattctagtatcggtatggcaccgtttgaggctttgtatggtcggagatgtaggacaccgttgtgttggt 23817551  T
Q  104 ttgagtc 110  Q
    |||||||    
T  23817552 ttgagtc 23817558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 24825717 - 24825811
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggacc 134  Q
    ||||||||||||||||| || |||||  ||||||| ||||||||||||||||| || || ||| ||||||| ||||||||||| || ||||||||    
T  24825717 agtattggtatggcaccttttgaagctctgtatggtcggaggtgtaggactccgttgtgttgggttgagtcaggtgagagtgtagttttgggacc 24825811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 24831586 - 24831719
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||    ||||| || ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  24831586 ttgattgagtttacttacaacaacagttttcatgttagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 24831685  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || |||| || | |||| ||||||||    
T  24831686 ttgagtccggagagaatgctttgttaggaccgga 24831719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 45529516 - 45529422
Alignment:
Q  43 attggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||| ||||||||||||||||| |||||||| ||||| || |  ||||| || || |||| |||||| ||||||||||| || |||||||||||    
T  45529516 attggaatggcaccgttcgaagcgttgtatggtcggagatgcaaaactccattgtgttggtatgagtccggtgagagtgtggtattgggaccgga 45529422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 24570067 - 24570200
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| || ||||||||||| || || || ||| | | |||||||||||| || || || ||||    
T  24570067 ttgattgagtttacttacaacaacagttttcattctagtatcggaatggcaccgtttgaggctttatatcgtcagaggtgtaggacaccgttgtgttggt 24570166  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||  || || |||||| |||| ||||||||    
T  24570167 ttgagttaggagaaagtgttttgttaggaccgga 24570200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 24948633 - 24948564
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatg 73  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||    
T  24948633 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatg 24948564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 9610180 - 9610077
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  9610180 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 9610081  T
Q  104 ttga 107  Q
    ||||    
T  9610080 ttga 9610077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 10868894 - 10868791
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| ||||||||||| || ||||| || |||||||| |||||||||||||| || ||||| || ||||| || || ||||| || || ||||    
T  10868894 ttgatcgagttcacttataacaatagttatcattctagtattggaatggcaccgttcgaggctttgtacggtcggagatgcagaactccgttgtgttggt 10868795  T
Q  104 ttga 107  Q
    ||||    
T  10868794 ttga 10868791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 16925304 - 16925201
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  16925304 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 16925205  T
Q  104 ttga 107  Q
    ||||    
T  16925204 ttga 16925201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 16982196 - 16982093
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  16982196 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 16982097  T
Q  104 ttga 107  Q
    ||||    
T  16982096 ttga 16982093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 16999044 - 16998941
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  16999044 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 16998945  T
Q  104 ttga 107  Q
    ||||    
T  16998944 ttga 16998941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 17063761 - 17063658
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  17063761 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 17063662  T
Q  104 ttga 107  Q
    ||||    
T  17063661 ttga 17063658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 17067419 - 17067316
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  17067419 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 17067320  T
Q  104 ttga 107  Q
    ||||    
T  17067319 ttga 17067316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 44385968 - 44386071
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  44385968 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 44386067  T
Q  104 ttga 107  Q
    ||||    
T  44386068 ttga 44386071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 11358980 - 11359025
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttg-aactatgtggag 194  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  11358980 tgtaacgccctagttatttatttaattaatttgaaactatgtggag 11359025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 27218054 - 27217957
Alignment:
Q  10 gagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttga 107  Q
    ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||||||    
T  27218054 gagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggtttga 27217957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 22325255 - 22325331
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggag 80  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| |||||    
T  22325255 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggag 22325331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 24480368 - 24480412
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  24480368 tgtaacgccctagttatttatttaattattttaaactatgtggag 24480412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 35586787 - 35586743
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  35586787 tgtaacgccctagttatttatttaattattttaaactatgtggag 35586743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 24710077 - 24709974
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| ||| ||||||| || ||||||||||| ||||| || || ||||| || || ||||    
T  24710077 ttgatcgagttcacttataataatagttatcattctagtattggaatgacaccgtttgaggccttgtatggtcggagatgcagaactccgttgtgttggt 24709978  T
Q  104 ttga 107  Q
    ||||    
T  24709977 ttga 24709974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 18362700 - 18362770
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatgg 74  Q
    |||||||| ||| | ||||||||||| |||||||| ||||| || ||||| |||| |||||| ||||||||    
T  18362700 ttgattgaatttgcctataacaacagttatcactctagtataggcatggccccgtacgaagctttgtatgg 18362770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 36983302 - 36983348
Alignment:
Q  149 atgtaacgccctagttgtttatttaattaatttgaa-ctatgtggag 194  Q
    |||||||||||||||| |||||||||||||||| || ||||||||||    
T  36983302 atgtaacgccctagttatttatttaattaattttaatctatgtggag 36983348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 18979690 - 18979645
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  18979690 tgtaacgccctagttatttatttaattaattttaaactatgtggag 18979645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 21123575 - 21123530
Alignment:
Q  150 tgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||||    
T  21123575 tgtaacgacctagttgttatatttaattaatttgaattatgtggag 21123530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 24262387 - 24262302
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  24262387 tatcattcaagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 24262302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 41608811 - 41608896
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  41608811 tatcattcaagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 41608896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 23887115 - 23887147
Alignment:
Q  149 atgtaacgccctagttgtttatttaattaattt 181  Q
    |||||||||||||||| ||||||||||||||||    
T  23887115 atgtaacgccctagttatttatttaattaattt 23887147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 27371313 - 27371237
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggag 80  Q
    ||||| ||||| |||||||| || || || || || |||||||| |||||||||||||| || |||||||| |||||    
T  27371313 ttgatcgagttcacttataataatagttaccattctagtattggaatggcaccgttcgaggctttgtatggtcggag 27371237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 42553163 - 42553119
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttga-actatgtgga 193  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||    
T  42553163 tgtaacgccctagttatttatttaattaattttatactatgtgga 42553119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 10468853 - 10468998
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10468853 ttgattgagttcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgctggt 10468952  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10468953 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 10468998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 24364692 - 24364544
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  24364692 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcatcgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 24364593  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  24364592 ggtttgagtcgagtgagagtgttgtgttgggaccggacttggttcatga 24364544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 14381471 - 14381614
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || ||||| || || || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  14381471 ttgatagagttcacatacaacaatagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcctttatgctggt 14381570  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||  | |||||||| ||||||||| ||||||||||||||    
T  14381571 ttgagtcatgagagagtgtcgtgttgggatcggatttggttcat 14381614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 19453664 - 19453554
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| || |||||||| ||||||||||| |    
T  19453664 tcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggtttgagtcaggagagagtgtggtgttgggaccag 19453565  T
Q  137 atttggttcat 147  Q
    |||||||||||    
T  19453564 atttggttcat 19453554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 21471878 - 21471735
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| || ||||    
T  21471878 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggacggaggtgcaggactcctttgtgttggt 21471779  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||  ||||||||||||||||||||||||    
T  21471778 ttgagtcgggagaaagtgcagtgttgggaccggatttggttcat 21471735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 8766152 - 8766297
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || || ||||| || || ||||||||||||||||||||||||||||| ||||||||  ||||||| ||||||| |||||||||||    
T  8766152 ttgatagagttcacatacaataacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggttggaggtgcaggactcatttatgctggt 8766251  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| || |||||||| |||| |||||||||||||||||||||    
T  8766252 ttgagtcaggagagagtgtcgtgtggggaccggatttggttcatga 8766297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 17415745 - 17415620
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || |||||||||| |||| ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| |  || ||||    
T  17415745 aacaacagttaccattcgagtattgatatgacaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggtttgagtcagaagaaagtg 17415646  T
Q  122 ttgtgttgggaccggatttggttcat 147  Q
    ||||||||||||||||||||||||||    
T  17415645 ttgtgttgggaccggatttggttcat 17415620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 18801201 - 18801076
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || |||||||||||||||||  |||||||||| |||||||| |||||||| |||||||||||||||||||||||||  || || ||||    
T  18801201 aacaacagttaccattcgagtattggtatggcctcgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggtttgagttaggagaaagtg 18801102  T
Q  122 ttgtgttgggaccggatttggttcat 147  Q
    ||||||||||||||||||||||||||    
T  18801101 ttgtgttgggaccggatttggttcat 18801076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 15459592 - 15459471
Alignment:
Q  25 aacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttg 124  Q
    ||||| ||||| || ||||||||||||||||| || ||||| || ||||| |||||||||||||||||| |||| |||||||||||||| || |||||||    
T  15459592 aacagttatcattcaagtattggtatggcaccatttgaagctttatatggtcggaggtgtaggactcctctatgttggtttgagtcgggagaaagtgttg 15459493  T
Q  125 tgttgggaccggatttggttca 146  Q
    ||||||||||||||||||||||    
T  15459492 tgttgggaccggatttggttca 15459471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 22796636 - 22796779
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||||||||||||||||| |||| ||||| || |||||||| |||||||||||||| || |    
T  22796636 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcaaagctttgtacggtcggaggtgcaggactcctttatgttgat 22796735  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||| |||||| |||||||||||||||||    
T  22796736 ttgagtcaggagagagtgtagtgttgcgaccggatttggttcat 22796779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 28282817 - 28282959
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  28282817 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcaggactccgttgtgttggt 28282916  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    ||||||| || || ||||||||| |||||||||||||||||||    
T  28282917 ttgagtcaggagaaagtgttgtgctgggaccggatttggttca 28282959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 5297227 - 5297308
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    |||||||| || || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  5297227 aacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcctttatgctggt 5297308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 1641049 - 1640906
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| ||| |||| |||||||| || ||||| ||||| ||||    
T  1641049 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgcatggacggaggtgcagaactccgttatgttggt 1640950  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    || |||||||||| |||||  |||||||||| ||| | ||||||    
T  1640949 ttaagtcgggtgaaagtgtaatgttgggaccagatatagttcat 1640906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 25768468 - 25768325
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||| | || || ||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||| || || ||||    
T  25768468 ttgatagagttcacgtacaacaactgttaccattcgagtattggtatggcaccgttcgaagctttgtgtggtcggaggtgcaggactccattgtgttggt 25768369  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||| || || ||||||||||| ||||||    
T  25768368 ttgagtcgggagaaagtgtggtctttggaccggatttagttcat 25768325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 27560621 - 27560763
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  27560621 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcaggactccattgtgttggt 27560720  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    |||| || || || ||||||||||||||||||||||| |||||    
T  27560721 ttgaatcaggagaaagtgttgtgttgggaccggatttagttca 27560763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 34645590 - 34645720
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| || |||||||||||||| || || || ||||||||||||||||||||||| ||||| |||||||| || || || ||||||||||| || ||||    
T  34645590 ttgatagaatttacttataacaatagttaccattcgagtattggtatggcaccgtttgaagcattgtatggtcgcagatgcaggactcctttgtgttggt 34645689  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||||||| || |||||  ||||||||||    
T  34645690 ttgagtcgggagaaagtgtgatgttgggacc 34645720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 16382377 - 16382510
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  16382377 ttgattgagtttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 16382476  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  16382477 ttgagtccggagagagtgctttgttaggaccgga 16382510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 19879575 - 19879448
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||||||||| ||||| || || || ||||||||||||||||||||||| ||||| |||||||| || ||||| || |||||||| || ||||    
T  19879575 ttgatagagtttacttacaacaatagttaccattcgagtattggtatggcaccgtttgaagcattgtatggacgaaggtgcagaactcctttgtgttggt 19879476  T
Q  104 ttgagtcgggtgagagtgttgtgttggg 131  Q
    |||| ||||| || |||||  |||||||    
T  19879475 ttgaatcgggagaaagtgtgatgttggg 19879448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 23996525 - 23996392
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || ||||||| ||| || ||||||||||| |||||||||||||| || || || ||||    
T  23996525 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatggcactgtttgaggccttgtatggtcggaggtgtaggacaccgttgtgttggt 23996426  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  23996425 ttgagtccggagagagtgctttgttaggaccgga 23996392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 16098327 - 16098221
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||  | ||| || ||||| |||||||| ||||| ||||| |||||||| |||||||||||||| || || || ||||    
T  16098327 ttgattgagtttacttacaacaacaattttcattctagtatcggtatggctccgtttgaagctttgtatggtcggaggtgtaggacaccgttgtgttggt 16098228  T
Q  104 ttgagtc 110  Q
    |||||||    
T  16098227 ttgagtc 16098221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 11280518 - 11280639
Alignment:
Q  13 tttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgg 112  Q
    |||||||| ||||| || || || ||||||||||||||||||||||| ||||| |||||||  || || || || |||||||| || |||||||||||||    
T  11280518 tttacttacaacaatagttaccattcgagtattggtatggcaccgtttgaagcattgtatgatcgaagatgcagaactcctttgtgttggtttgagtcgg 11280617  T
Q  113 gtgagagtgttgtgttgggacc 134  Q
    | || |||||  ||||||||||    
T  11280618 gagaaagtgtgatgttgggacc 11280639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 18837912 - 18838029
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || |||||  | ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  18837912 ttgattgagtttacttacaacaacagttttcattctagtatccgaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 18838011  T
Q  104 ttgagtcgggtgagagtg 121  Q
    ||||||| || |||||||    
T  18838012 ttgagtccggagagagtg 18838029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 21564169 - 21564266
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggacc 134  Q
    ||||||||||||||||  ||||||||||| ||||| || ||||||||  ||||||||||||| ||||||||||| || || |||||  ||||||||||    
T  21564169 tcgagtattggtatggttccgttcgaagctttgtacggtcggaggtgccggactcctttatgttggtttgagtcaggagaaagtgtgatgttgggacc 21564266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 27187713 - 27187601
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || |||||||| || |||||||| |||||||||||||| ||  ||||||| ||||| || |||||||| || || ||||    
T  27187713 ttgatcgagttcacttataataatagctatcattctagtattggaatggcaccgttcgaggctctgtatggtcggagatgcaggactccgttgtgttggt 27187614  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  27187613 ttgagtcaggtga 27187601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 27261527 - 27261639
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || |||||||| || |||||||| |||||||||||||| ||  ||||||| ||||| || |||||||| || || ||||    
T  27261527 ttgatcgagttcacttataataatagctatcattctagtattggaatggcaccgttcgaggctctgtatggtcggagatgcaggactccgttgtgttggt 27261626  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  27261627 ttgagtcaggtga 27261639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 1648788 - 1648894
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  1648788 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 1648887  T
Q  104 ttgagtc 110  Q
    |||||||    
T  1648888 ttgagtc 1648894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 15078368 - 15078474
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || |||||||| ||||||||||| || || |||||||  |||||||||| ||| || || || ||||    
T  15078368 ttgattgagtttacttacaacaacagttttcattctagtattggaatggcaccgtttgaggctttgtatgatcggaggtgtaagacaccgttgtgttggt 15078467  T
Q  104 ttgagtc 110  Q
    |||||||    
T  15078468 ttgagtc 15078474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 17355533 - 17355583
Alignment:
Q  143 ttcatgatgtaacgccctagttgtttatttaattaatttgaactatgtgga 193  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  17355533 ttcatggtgtaacgccctagttgtttatttaattaatttgaattatgtgga 17355583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 25743095 - 25743209
Alignment:
Q  7 attgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttg 106  Q
    |||||||||||||| |||||||| | ||| || |||||||| ||||| ||||| || || |||||||| ||||| |||||||| || || || |||||||    
T  25743095 attgagtttacttacaacaacagttttcattctagtattggaatggctccgtttgaggctttgtatggtcggagctgtaggacaccgttgtgttggtttg 25743194  T
Q  107 agtcgggtgagagtg 121  Q
    |||| ||||| ||||    
T  25743195 agtcaggtgaaagtg 25743209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 1537094 - 1537138
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  1537094 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 1537138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 19215632 - 19215588
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  19215632 tgtaacgccctagttgtttatttaattaatttgaagtatgtggag 19215588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 33876351 - 33876307
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  33876351 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 33876307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 18794967 - 18794862
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| |||||||| || ||||| || || || |||||||||||||||||||| || ||||||||||| || || ||||| |  |||||||| || ||||    
T  18794967 ttgatagagtttacctacaacaatagttaccattcgagtattggtatggcaccatttgaagccttgtacggtcgaaggtgcataactcctttgtgttggt 18794868  T
Q  104 ttgagt 109  Q
    ||||||    
T  18794867 ttgagt 18794862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 1652350 - 1652266
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtagga 88  Q
    ||||||||||||||||| |||||||| | ||| || ||||| || ||||| ||||| || || |||||||| |||||||||||||    
T  1652350 ttgattgagtttacttacaacaacagttttcattctagtatcggaatggctccgtttgaggctttgtatggtcggaggtgtagga 1652266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 28292376 - 28292488
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || |||||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || || ||||    
T  28292376 ttgatcgagttcacttataataatagctatcattctagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgttggt 28292475  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  28292476 ttgagtcaggtga 28292488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 16626721 - 16626824
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || || || || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  16626721 ttgatcgagttcacttataataatagttaccattctagtattggaatggcaccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 16626820  T
Q  104 ttga 107  Q
    ||||    
T  16626821 ttga 16626824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 21412942 - 21413045
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| || ||||| | ||| || | ||| |||||||||| ||| || || |||||||| |||||||||||||| || || || ||||    
T  21412942 ttgattgagtttacttacaataacagttttcattctaatatcggtatggcactgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 21413041  T
Q  104 ttga 107  Q
    ||||    
T  21413042 ttga 21413045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 24313172 - 24313275
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  24313172 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 24313271  T
Q  104 ttga 107  Q
    ||||    
T  24313272 ttga 24313275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 29591924 - 29592027
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  29591924 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 29592023  T
Q  104 ttga 107  Q
    ||||    
T  29592024 ttga 29592027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 16233478 - 16233369
Alignment:
Q  12 gtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcg 111  Q
    ||||||||| |||||||| | |||  | ||||| || ||||||||||| || || |||||||| || ||||||||||| || || || |||||||||||     
T  16233478 gtttacttacaacaacagttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcgaaggtgtaggacaccgttgtgttggtttgagtcc 16233379  T
Q  112 ggtgagagtg 121  Q
    || |||||||    
T  16233378 ggagagagtg 16233369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 30798416 - 30798461
Alignment:
Q  150 tgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  30798416 tgtaacgccctagttgttatatttaattaatttgaattatgtggag 30798461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 1543088 - 1543200
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| ||||| || || |||||||| || |||||||| |||||||| ||||| || || ||||| ||||| || |  ||||| || |||||||    
T  1543088 ttgatcgagttcacttacaataatagctatcattctagtattggaatggcacctttcgaggctttatatggtcggagatgcataactccgttgtgctggt 1543187  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  1543188 ttgagtcaggtga 1543200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 6955470 - 6955422
Alignment:
Q  147 tgatgtaacgccctagttgtttatttaattaatttga-actatgtggag 194  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||    
T  6955470 tgatgtaacgccctagttatttatttaattaattttatactatgtggag 6955422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 16927650 - 16927750
Alignment:
Q  10 gagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagt 109  Q
    ||||| || |||||||| |||||||| || |||||||| |||||||| || || || |||||||| ||||| || || ||||| || || ||||||||||    
T  16927650 gagttcacgtataacaatagctatcattctagtattggaatggcaccttttgaggctttgtatggtcggagatgcagaactccgttgtgttggtttgagt 16927749  T
Q  110 c 110  Q
    |    
T  16927750 c 16927750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 6928840 - 6928886
Alignment:
Q  149 atgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  6928840 atgtaacgccctagttatttatttaattaattttaaactatgtggag 6928886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 18571925 - 18571811
Alignment:
Q  7 attgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttg 106  Q
    |||||||||||||| |||||||| | ||| || ||||| || ||| | ||||| || || ||||||||  ||||||||||||| |  || || |||||||    
T  18571925 attgagtttacttacaacaacagttttcattctagtatcggaatgactccgtttgaggctttgtatggtaggaggtgtaggacactgttgtgttggtttg 18571826  T
Q  107 agtcgggtgagagtg 121  Q
    |||| ||||| ||||    
T  18571825 agtcaggtgaaagtg 18571811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 2874834 - 2874919
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || || || || ||||||||||||||||||||    
T  2874834 tatcattcaagtattggaatggcacctttcgaggctttatatggtcggagatgcagaaccccgttgtgctggtttgagtcgggtga 2874919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 25765321 - 25765406
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || |||||||| ||||| || || ||||| || || ||||||||||| |||||    
T  25765321 tatcattctagtattggaatggcacctttcgaggctttgtatggtcggagatgcagaactccattgtgttggtttgagtcaggtga 25765406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 17703577 - 17703545
Alignment:
Q  149 atgtaacgccctagttgtttatttaattaattt 181  Q
    |||||||||||||||| ||||||||||||||||    
T  17703577 atgtaacgccctagttatttatttaattaattt 17703545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16572 - 16720
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16572 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 16671  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  16672 ggtttaagtcgggtgagagtgttgtgttgggaccggacttggttcatga 16720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 17282 - 17326
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  17282 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 17326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 37677511 - 37677363
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37677511 cctttgattgaattcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 37677412  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37677411 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 37677363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 20294840 - 20294695
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  20294840 ttgattgagttcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggttggaggtgtaggactcctttatgctggt 20294741  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  20294740 ttgagtcgggtgagagtgttgtgttgggaccggacttggttcatga 20294695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 31550133 - 31550257
Alignment:
Q  25 aacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31550133 aacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgctggtttgagtcgggtgaaagtgttg 31550232  T
Q  125 tgttgggaccggatttggttcatga 149  Q
    |||||||||||||||| ||||||||    
T  31550233 tgttgggaccggatttagttcatga 31550257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 20939994 - 20940137
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||| |||||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||    
T  20939994 ttgatagagttcacgtacaacaacagttaccattcgagtattgttatggcaccgttcgaagctttgtatggtcggaggtataggactcctttatgctagt 20940093  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  20940094 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 20940137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 20835819 - 20835962
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||    
T  20835819 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggctccgttcgaagctttgtatggtcggaggtgtagaactcctttatgctggt 20835918  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || ||||||||||| |||||||| ||||||||||||    
T  20835919 ttgagtcaggagagagtgttgttttgggaccagatttggttcat 20835962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 19854737 - 19854599
Alignment:
Q  9 tgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgag 108  Q
    |||||| || || |||||||| || || ||||||||||||||||||| ||||||||| |||||| | |||||||| |||||||||||| |||||||||||    
T  19854737 tgagttcacatacaacaacagttaccattcgagtattggtatggcacggttcgaagctttgtatagtcggaggtgcaggactcctttacgctggtttgag 19854638  T
Q  109 tcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    || || |||||||||||||||||||||||||||||||||    
T  19854637 tcaggagagagtgttgtgttgggaccggatttggttcat 19854599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 22433048 - 22433192
Alignment:
Q  5 tgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtt 104  Q
    |||| ||||| || ||||||||||| || || |||||||| ||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||    
T  22433048 tgatagagttcacatataacaacagttaccattcgagtataggtatggcaccattcgaagctttgtatggttggaggtgtaggactcctttatgctggtt 22433147  T
Q  105 tgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||| || | |||||| |||||||||||| |||||||||||||    
T  22433148 tgagtcaggagcgagtgtggtgttgggaccgaatttggttcatga 22433192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 20856692 - 20856837
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| || ||||| || |||||||| || || |||||| |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||    
T  20856692 ttgatagaatttacatacaacaacagttaccattcgagtgttggtatggcaccgtttgaagctttgtatggtcggaggtgcaggactcctttatgctggt 20856791  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    | |||||||| || |||||||||||||| | ||| |||||||||||    
T  20856792 tcgagtcgggagaaagtgttgtgttggggctggaattggttcatga 20856837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 41308253 - 41308110
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||  || || ||||||||||||||||||||||||||||| |||||||| || ||||| | |||||||||||| ||||    
T  41308253 ttgatagagttcacgtacaacaacaattagcattcgagtattggtatggcaccgttcgaagctttgtatggtcgaaggtgcatgactcctttatgttggt 41308154  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||| ||| || ||||| |||||||||| |||||||||||||    
T  41308153 ttgagttgggagaaagtgtggtgttgggactggatttggttcat 41308110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 19760818 - 19760927
Alignment:
Q  25 aacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttg 124  Q
    ||||| ||||| || |||||||| ||| |||| ||||||||  ||||||| ||||||||||||||||| || || ||||| ||||| ||||||||||| |    
T  19760818 aacagttatcattctagtattggaatgacacctttcgaagctctgtatggtcggaggtgtaggactccgttgtgttggttcgagtcaggtgagagtgtag 19760917  T
Q  125 tgttgggacc 134  Q
    | ||||||||    
T  19760918 ttttgggacc 19760927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 20831323 - 20831426
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  20831323 ttgattgagtttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 20831422  T
Q  104 ttga 107  Q
    ||||    
T  20831423 ttga 20831426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 19663067 - 19663161
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatg 98  Q
    ||||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||  | ||||||||||||    
T  19663067 ttgatagagttcacatacaacaacagttaccattcgagtatcggtatggcaccgttcgaagctttgtatggtcggaggtccatgactcctttatg 19663161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 1525607 - 1525651
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  1525607 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 1525651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 12204017 - 12203973
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  12204017 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 12203973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 18419513 - 18419469
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  18419513 tgtaacgccctagttgtctatttaattaatttgaactatgtggag 18419469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 36210641 - 36210685
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  36210641 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 36210685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 36210752 - 36210796
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  36210752 tgtaacgccctagttgtttatttaattaatttgaattatgtggag 36210796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 41354400 - 41354512
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || |||||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  41354400 ttgatcgagttcacttataataatagctatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 41354499  T
Q  104 ttgagtcgggtga 116  Q
    |||| || |||||    
T  41354500 ttgaatccggtga 41354512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 19664895 - 19664950
Alignment:
Q  92 ctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||    
T  19664895 ctttatgttggtttgagtcaggagagagtgttgtgttgggatcggatttggttcat 19664950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 22135489 - 22135619
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    |||||||| |||||||| |||||||| | | | || ||||| | |||||||||||| || || |||||||| || ||||||||||| || || || ||||    
T  22135489 ttgattgattttacttacaacaacagtttttattctagtatcgatatggcaccgtttgaggctttgtatggtcgaaggtgtaggacgccattgtgttggt 22135588  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    ||||||| ||||| |||| | |||| |||||    
T  22135589 ttgagtcaggtgaaagtgctttgttaggacc 22135619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 38906766 - 38906810
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||    
T  38906766 tgtaacgccctagttatttatttaattaatttgaattatgtggag 38906810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 33390960 - 33391063
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || || || || |||||||| |||||||||||||| ||||||||||| ||||| || || ||||| || || ||||    
T  33390960 ttgatcgagttcacttataataatagttaccattctagtattggaatggcaccgttcgaggccttgtatggtcggagatgcagaactccgttgtgttggt 33391059  T
Q  104 ttga 107  Q
    ||||    
T  33391060 ttga 33391063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 51333424 - 51333527
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  51333424 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 51333523  T
Q  104 ttga 107  Q
    ||||    
T  51333524 ttga 51333527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 20914638 - 20914532
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| || ||||  | |||  | ||||| || ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  20914638 ttgattgagtttacttacaaaaacaattttcatactagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 20914539  T
Q  104 ttgagtc 110  Q
    |||||||    
T  20914538 ttgagtc 20914532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 21830725 - 21830619
Alignment:
Q  10 gagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagt 109  Q
    ||||| || ||||| || || ||||| || |||||||| |||||||| ||||| || || ||||| ||||| ||||| ||||| || |||||||||||||    
T  21830725 gagttcacatataataatagttatcattcaagtattggaatggcacctttcgaggctttatatggtcggagatgtagaactccgttgtgctggtttgagt 21830626  T
Q  110 cgggtga 116  Q
    | |||||    
T  21830625 caggtga 21830619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 19045027 - 19045072
Alignment:
Q  150 tgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  19045027 tgtaacgccctagttgttatatttaattaatttgaattatgtggag 19045072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 20395634 - 20395679
Alignment:
Q  150 tgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  20395634 tgtaacgccctagttgttatatttaattaatttgaattatgtggag 20395679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 21837378 - 21837302
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggag 80  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| |||||    
T  21837378 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgacgctttgtatggtcggag 21837302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 16350530 - 16350633
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  16350530 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 16350629  T
Q  104 ttga 107  Q
    ||||    
T  16350630 ttga 16350633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 20395000 - 20395046
Alignment:
Q  149 atgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||    
T  20395000 atgtaacgtcctagttgttatatttaattaatttgaattatgtggag 20395046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 26722471 - 26722505
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaa 184  Q
    ||||||||||||||| |||||||||||||||||||    
T  26722471 tgtaacgccctagttatttatttaattaatttgaa 26722505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 31534026 - 31534071
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttga-actatgtggag 194  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||    
T  31534026 tgtaacgccctagttatttatttaattaattttatactatgtggag 31534071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 31550819 - 31550864
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttga-actatgtggag 194  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||    
T  31550819 tgtaacgccctagttatttatttaattaattttatactatgtggag 31550864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 6741915 - 6741871
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    |||||||  ||||||| |||||||||||||||||| |||||||||    
T  6741915 tgtaacgttctagttgcttatttaattaatttgaattatgtggag 6741871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 31539925 - 31539953
Alignment:
Q  1 cctttgattgagtttacttataacaacag 29  Q
    |||||||||||||||||||||||||||||    
T  31539925 cctttgattgagtttacttataacaacag 31539953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 37683469 - 37683437
Alignment:
Q  149 atgtaacgccctagttgtttatttaattaattt 181  Q
    |||||||||||||||| ||||||||||||||||    
T  37683469 atgtaacgccctagttatttatttaattaattt 37683437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 2e-69; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 47123989 - 47123841
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47123989 cctttgattgaatttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgct 47123890  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  47123889 ggtttgagtcgggtgaaagtgttgtgttgggaccggatttggtgcatga 47123841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 28754363 - 28754215
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  28754363 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcctttatgct 28754264  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||    
T  28754263 ggtttgagtcgggtgaaagtgttgcgttgggaccggatttggtacatga 28754215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10384014 - 10383866
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  10384014 cctttgattgagttcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctttgtgct 10383915  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  10383914 ggtttgagtcgggtgaaagtattgtgttgggaccggatttagttcatga 10383866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 16329746 - 16329891
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||    
T  16329746 ttgattgagttcacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaggactcctctatgttggt 16329845  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||    
T  16329846 ttgagtcaggtgagagtgttgtgttgggaccggacttggttcatga 16329891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 11961121 - 11961266
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  11961121 ttgattgagttcacttataacaacagctatcattcgagtattggcatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 11961220  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  11961221 ttgagtcaggtgagagtgttgtgttgggaccggatgtggttcatga 11961266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 18134433 - 18134576
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  18134433 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggaatcctttatgctggt 18134532  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  18134533 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 18134576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 16836615 - 16836742
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||| || |||||||    
T  16836615 aacaacagttaccattcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactccgttatgctggtttgagtcaggagagagtg 16836714  T
Q  122 ttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||| ||||||||||||||    
T  16836715 ttgtgttgggaccagatttggttcatga 16836742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 17492672 - 17492529
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || ||||| || ||||| |||| |||||||||||||||| ||||||| |||||||| |||||||| |||||||||||| ||||||    
T  17492672 ttgatagagttcacatacaacaatagttatcattcgaatattggtatggcaccgatcgaagctttgtatggtcggaggtgcaggactcctttaagctggt 17492573  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  17492572 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 17492529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 13322736 - 13322882
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||| |||||||| || |||||||  || || |||||||||||||||||||| |||||||| ||||| || |||||||| || |||||||||||||    
T  13322736 cctttgatagagtttacctacaacaacaattaccattcgagtattggtatggcaccattcgaagctttgtacggtcggaggtgcagaactcctttatgct 13322835  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| ||| |||||| |||||||||||||||||||||||||    
T  13322836 ggtttgagtcaggtcagagtgctgtgttgggaccggatttggttcat 13322882  T

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Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 10420150 - 10420277
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| ||||| || ||||||||||||||||| || ||||| || ||||| |||||||||||||||||| |||| |||||||||||||| || ||||    
T  10420150 aacaacagttatcattcaagtattggtatggcaccatttgaagctttatatggtcggaggtgtaggactcctctatgttggtttgagtcgggagaaagtg 10420249  T
Q  122 ttgtgttgggaccggatttggttcatga 149  Q
    ||||||||||||||||||||||||||||    
T  10420250 ttgtgttgggaccggatttggttcatga 10420277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 15953055 - 15953198
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| |  || ||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||| | ||    
T  15953055 ttgatagagttcacgtacaacaacagttgccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcagaactcctttatgtttgt 15953154  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||||||||||||||||||||||||||||    
T  15953155 ttgagtcgggagaaagtgttgtgttgggaccggatttggttcat 15953198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 37 - 147
Target Start/End: Original strand, 11303893 - 11304003
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||     
T  11303893 tcgagtattggtaaggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggtttgagtcaggagagagtgttgtgttgggaccga 11303992  T
Q  137 atttggttcat 147  Q
    ||||| |||||    
T  11303993 atttgattcat 11304003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 12360629 - 12360772
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||    
T  12360629 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactccattatgctggt 12360728  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || ||||||| ||| |||||||| || |||||||||    
T  12360729 ttgagtcaggagagagtgctgtattgggaccagacttggttcat 12360772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 8759169 - 8759311
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  8759169 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcaggactccgttgtgttggt 8759268  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    ||||||| || || |||||||||||||||||||||||||||||    
T  8759269 ttgagtcaggagaaagtgttgtgttgggaccggatttggttca 8759311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 13001933 - 13001808
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |  ||||| ||||| |||||||||||||| || ||||    
T  13001933 aacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaaaactccattatgttggtttgagtcgggagaaagtg 13001834  T
Q  122 ttgtgttgggaccggatttggttcat 147  Q
    | ||||||||||| ||||| ||||||    
T  13001833 tagtgttgggaccagatttagttcat 13001808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 4678480 - 4678338
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  4678480 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcacccttcgaagctttgtatggtcgaaggtgcaggactccgttgtgttggt 4678381  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    ||||||| || || ||||||||| |||||||||||||||||||    
T  4678380 ttgagtcaggagaaagtgttgtgctgggaccggatttggttca 4678338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 13972207 - 13972337
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||||||||| ||||| || || || ||||||||||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||    
T  13972207 ttgatagagtttacttacaacaatagttaccattcgagtattggtatggcaccgtttgaagccttgtatggtcgaaggtgcagaactcctttgtgttggt 13972306  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||||||| || |||||  ||||||||||    
T  13972307 ttgagtcgggagaaagtgtgatgttgggacc 13972337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 14086715 - 14086585
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||||||||| ||||| || || || ||||||||||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||    
T  14086715 ttgatagagtttacttacaacaatagttaccattcgagtattggtatggcaccgtttgaagccttgtatggtcgaaggtgcagaactcctttgtgttggt 14086616  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||||||| || |||||  ||||||||||    
T  14086615 ttgagtcgggagaaagtgtgatgttgggacc 14086585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 41177564 - 41177422
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  41177564 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcaccattcgaagctttgtatggtcgaaggtgcaggactccgttgtgttggt 41177465  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    ||||||| || || ||||||||| |||||||||||||||||||    
T  41177464 ttgagtcaggagaaagtgttgtgctgggaccggatttggttca 41177422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 16381015 - 16381162
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||| ||||| |||||||||||||| |||||||| || ||||| |||||||| || |||||||    
T  16381015 ttgatagagttcacctacaacaacagttaccattcgagtataggtatcgcaccgttcgaagctttgtatggtcgaaggtgcaggactccgttgtgctggt 16381114  T
Q  104 ttgagtcgggtgagagtgttgtg--ttgggaccggatttggttcatga 149  Q
    ||||||| || ||||||||| ||  | |||||||||||||||||||||    
T  16381115 ttgagtccggagagagtgttatggttggggaccggatttggttcatga 16381162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 13942066 - 13941924
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| |||||||| || || ||||    
T  13942066 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcacccttcgaagctttgtatggtcgaaggtgcaggactccgttgtgttggt 13941967  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    |||| |  || || |||||||||||||||||||||||||||||    
T  13941966 ttgaataaggagaaagtgttgtgttgggaccggatttggttca 13941924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 15227691 - 15227549
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||  ||||||||  ||||||| || ||||| ||||| ||||    
T  15227691 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagatttgtatggttggaggtgcagaactccgttatgttggt 15227592  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    |||||||| ||||  ||||  |||||||||| ||||| |||||    
T  15227591 ttgagtcgagtgaaggtgtaatgttgggaccagatttagttca 15227549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 26009086 - 26009186
Alignment:
Q  10 gagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagt 109  Q
    ||||||||||| ||||| || || || ||||||||||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||||||||    
T  26009086 gagtttacttacaacaatagttaccattcgagtattggtatggcaccgtttgaagccttgtatggtcgaaggtgcagaactcctttgtgttggtttgagt 26009185  T
Q  110 c 110  Q
    |    
T  26009186 c 26009186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 12850402 - 12850509
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggatt 139  Q
    ||||||||||||||||||||| |||  |||||||| |||||||| || ||||| || || |||||||||||||| || ||||| ||||||||||| ||||    
T  12850402 agtattggtatggcaccgttcaaagatttgtatggtcggaggtgcagaactccattgtgttggtttgagtcgggagaaagtgtagtgttgggaccagatt 12850501  T
Q  140 tggttcat 147  Q
    | ||||||    
T  12850502 tagttcat 12850509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 44777289 - 44777147
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| |||||||| || |||||||| |||||||| || ||||| || ||||| ||||||||||| || ||||    
T  44777289 ttgatagagttcacctacaacaacagttatcattcgagtataggaatggcaccattcgaagcattatatggtcgaaggtgcaggactcctttgtgttggt 44777190  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttca 146  Q
    | ||| | || || ||||||||||||||||| ||||| |||||    
T  44777189 tcgagacaggagaaagtgttgtgttgggaccagatttagttca 44777147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 8274497 - 8274630
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  8274497 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 8274596  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  8274597 ttgagtccggagagagtgctttgttaggaccgga 8274630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 16742801 - 16742934
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  16742801 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttttgttggt 16742900  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  16742901 ttgagtccggagagagtgctttgttaggaccgga 16742934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 15576792 - 15576659
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| |  ||  | ||||| || ||||||||||| || || |||||||| ||||||||||| || || ||||| ||||    
T  15576792 ttgattgagtttacttacaacaacagtttgcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtagaacaccgttatgttggt 15576693  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  15576692 ttgagtctggagagagtgctttgtttggaccgga 15576659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 14573971 - 14573887
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtagga 88  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  14573971 ttgatagagttcacgtacaacaacagttaccaatcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcagga 14573887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 14571809 - 14571747
Alignment:
Q  85 aggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||||||| || |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  14571809 aggactcctttgtgttggtttgaatcgggagaaagtgttgtgttgggaccggatttggttcat 14571747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 16756683 - 16756789
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || |||||||| || |||||||| |||||| ||||||| ||||||||||| ||||| || || ||||| || || ||||    
T  16756683 ttgatcgagttcacttataataatagctatcattctagtattggaatggcatcgttcgaggccttgtatggtcggagatgcagaactccgttgtgttggt 16756782  T
Q  104 ttgagtc 110  Q
    |||||||    
T  16756783 ttgagtc 16756789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 14183010 - 14183143
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| ||||| || | ||| |  |||||||||||||| || ||||| || |||||||   |||| ||||| || ||||| || ||||    
T  14183010 ttgattgagtttacttacaacaatagttttcatttaagtattggtatggctcctttcgatgctttgtatgagaggagatgtagaacacctttgtgttggt 14183109  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
     ||||||| |||| ||||||||||||||| ||||    
T  14183110 atgagtcgagtgaaagtgttgtgttgggatcgga 14183143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 6600779 - 6600667
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || |||||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||  || || ||||    
T  6600779 ttgatcgagttcacttataataatagctatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactctgttgtgttggt 6600680  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  6600679 ttgagtcaggtga 6600667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 53385116 - 53385228
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || |||||||| || |||||||| |||||||||||||| ||  ||||||| ||||| || || ||||| || || ||||    
T  53385116 ttgatcgagttcacttataataatagctatcattctagtattggaatggcaccgttcgaggctctgtatggtcggagatgcagaactccgttgtgttggt 53385215  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  53385216 ttgagtcaggtga 53385228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 18748707 - 18748574
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||| ||| |||||||  | ||| || ||||| |||||||||||||| || |  |||||||| ||||||||||||||  | || || ||||    
T  18748707 ttgattgagtttagttacaacaacaattttcattctagtatcggtatggcaccgtttgagggtttgtatggtcggaggtgtaggacgtcgttgtgttggt 18748608  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    |||| || ||||| |||| | |||| ||||||||    
T  18748607 ttgaatcaggtgaaagtgctttgttaggaccgga 18748574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 13975144 - 13975259
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| ||||| |||||||| | |||  | ||||| || ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  13975144 ttgattgagtt-acttacaacaacagttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 13975242  T
Q  104 ttgagtcgggtgagagt 120  Q
    ||||||| || ||||||    
T  13975243 ttgagtccggagagagt 13975259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 10005632 - 10005529
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  10005632 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 10005533  T
Q  104 ttga 107  Q
    ||||    
T  10005532 ttga 10005529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 13252686 - 13252619
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttga 107  Q
    |||||||| |||||||||||||| ||||||||||| ||||| || |||||||| || || ||||||||    
T  13252686 agtattggaatggcaccgttcgaggccttgtatggtcggagatgcaggactccgttgtgttggtttga 13252619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 14951702 - 14951655
Alignment:
Q  148 gatgtaacgccctagttgtttatttaattaatttg-aactatgtggag 194  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  14951702 gatgtaacgccctagttatttatttaattaatttgaaactatgtggag 14951655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 15348343 - 15348446
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || || || || |||||||| |||||||||||||| ||||||||||| ||||| || || ||||| || || ||||    
T  15348343 ttgatcgagttcacttataataatagttaccattctagtattggaatggcaccgttcgaggccttgtatggtcggagatgcagaactccgttgtgttggt 15348442  T
Q  104 ttga 107  Q
    ||||    
T  15348443 ttga 15348446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 15589490 - 15589593
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  15589490 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 15589589  T
Q  104 ttga 107  Q
    ||||    
T  15589590 ttga 15589593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 16413057 - 16413104
Alignment:
Q  148 gatgtaacgccctagttgtttatttaattaatttg-aactatgtggag 194  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16413057 gatgtaacgccctagttatttatttaattaatttgaaactatgtggag 16413104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 16635805 - 16635702
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  16635805 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 16635706  T
Q  104 ttga 107  Q
    ||||    
T  16635705 ttga 16635702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 17193126 - 17193003
Alignment:
Q  14 ttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcggg 113  Q
    ||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || |||||||| |  ||    
T  17193126 ttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacgccgttgtgttggtttgaataagg 17193027  T
Q  114 tgagagtgttgtgttgggaccgga 137  Q
     || |||||||||||  |||||||    
T  17193026 agaaagtgttgtgttacgaccgga 17193003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 20062152 - 20062255
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || |||||||| ||||| || || ||||| || || ||||    
T  20062152 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggtcggagatgcagaactccgttgtgttggt 20062251  T
Q  104 ttga 107  Q
    ||||    
T  20062252 ttga 20062255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 43163129 - 43163026
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| ||||||||||||||||| |||||||| ||||| || || ||||| || || ||||    
T  43163129 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccgttcgaagctttgtatggtcggagatgcagaactccgttgtgttggt 43163030  T
Q  104 ttga 107  Q
    ||||    
T  43163029 ttga 43163026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 267356 - 267462
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    |||||||||||||| || |||||||| | ||| ||||||||||| ||  ||||||| ||||| || |||||  |||||||||||| ||| || || ||||    
T  267356 ttgattgagtttacctacaacaacagttttcattcgagtattgggataacaccgtttgaagctttatatgggaggaggtgtaggaatccgttgtgttggt 267455  T
Q  104 ttgagtc 110  Q
     ||||||    
T  267456 atgagtc 267462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 15248158 - 15248061
Alignment:
Q  25 aacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgt 122  Q
    ||||| ||||| || |||||||| |||||||| || || || |||||| | ||||| ||||| ||||| || || ||||||||||| |||||||||||    
T  15248158 aacagttatcattctagtattggaatggcaccttttgaggctttgtatagtcggagatgtagaactccgttgtgttggtttgagtcaggtgagagtgt 15248061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 26792524 - 26792609
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| ||||||||||||||||| |||||    
T  26792524 tatcattcaagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccattatgctggtttgagtcaggtga 26792609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 14876597 - 14876709
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| |||||||| || || || |||||||| ||||| || || ||||| || |||||||    
T  14876597 ttgatcgagttcacatataataatagttatcattctagtattggaatggcaccttttgaggctttgtatggtcggagatgcagaactccgttgtgctggt 14876696  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  14876697 ttgagtcaggtga 14876709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 50654771 - 50654815
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  50654771 tgtaacgccctagttatttatttaattattttaaactatgtggag 50654815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 10906242 - 10906139
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||||| || ||||||||  |||| || || ||||| || || ||||    
T  10906242 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcgaggctttgtatggttggagatgcagaactccgttgtgttggt 10906143  T
Q  104 ttga 107  Q
    ||||    
T  10906142 ttga 10906139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 48425479 - 48425376
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| |||||||| || || ||||| || |||||||| |||||||||||| | || |||||||| ||||| || || ||||| || || ||||    
T  48425479 ttgatcgagttcacttataataatagttatcattctagtattggaatggcaccgttcaaggctttgtatggtcggagatgcagaactccgttgtgttggt 48425380  T
Q  104 ttga 107  Q
    ||||    
T  48425379 ttga 48425376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 15208923 - 15208805
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || || ||||| ||||| || |||||||| |||||||| || || || || ||||| ||||| || || ||||| || || ||||    
T  15208923 ttgatagagttcacgtacaataacagttatcattctagtattggaatggcaccttttgaggctttatatggacggagatgcagaactccgttgtgttggt 15208824  T
Q  104 ttgagtcgggtgagagtgt 122  Q
    ||||||| |||||||||||    
T  15208823 ttgagtcaggtgagagtgt 15208805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 3109850 - 3109805
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  3109850 tgtaacgccctagttatttatttaattaattttaaactatgtggag 3109805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 14843922 - 14843967
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  14843922 tgtaacgccctagttatttatttaattaattttaaactatgtggag 14843967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 15725059 - 15725144
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  15725059 tatcattcaagtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 15725144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 6152949 - 6153073
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    |||||||||||||| || |||||||  | ||| || ||||| |  ||||| || || || || |||||||| |||||||||||||| || || || ||||    
T  6152949 ttgattgagtttacatacaacaacaattttcattctagtatcgagatggctccatttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 6153048  T
Q  104 ttgagtcgggtgagagtgttgtgtt 128  Q
    |||| || || || |||||||||||    
T  6153049 ttgaatccggagaaagtgttgtgtt 6153073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 38758 - 38894
Alignment:
Q  13 tttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |    
T  38758 tttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggtcggaggtgtaagactcctttatgctggtttgagtcag 38857  T
Q  113 gtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| |||||||||||||||||||||||||||||    
T  38858 gtgagagcgttgtgttgggaccggatttggttcatga 38894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 26705 - 26560
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  26705 ttgattgagttcacttataacaacagctatcactcgagtattgggatggtaccgttcgaagccttgtatggtcggaggtgtaggactcctttatgttggt 26606  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| ||||| | ||||||||||||||| ||||||||||||||    
T  26605 ttgagtcaggtgaaaatgttgtgttgggaccagatttggttcatga 26560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 42195 - 42338
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  42195 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcctttatgctggt 42294  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || ||||||||||||||||||||| |||||||||||    
T  42295 ttgagtcaggagagagtgttgtgttgggaccgtatttggttcat 42338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 47261 - 47404
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  47261 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgaaggactcctttatgctggt 47360  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || ||||||||||||||||||||| |||||||||||    
T  47361 ttgagtcaggagagagtgttgtgttgggaccgtatttggttcat 47404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 542 - 399
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  542 ttgatagagttcacatacaacaacagttaccattcgagtattcgtatggcaccgttcgaagctttgtacggtcggaggtgtaggactcctttatgctggt 443  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  442 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 3217 - 3360
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  3217 ttgatagagttcacatagaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 3316  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||| ||||||||||||||    
T  3317 ttgagtcaggagagagtgttgtgttgggaacggatttggttcat 3360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 92; Significance: 7e-45; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 57679 - 57822
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||    
T  57679 ttgatagagttcacctacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactccgttatgctggt 57778  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  57779 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 57822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 48895 - 49038
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||||||||||||||| |||||| |||||||| |||||||| || ||||||||||| ||||    
T  48895 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgtacgaagctttgtatggtcggaggtgcagaactcctttatgttggt 48994  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    | |||||  |||| ||||| || ||||||| |||||||||||||    
T  48995 tcgagtcacgtgaaagtgtggtattgggactggatttggttcat 49038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 3195 - 3052
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||||||||||||||||| |||| |||||||| |||||||| |||||||||||||||||||    
T  3195 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcaaagctttgtatggtcggaggtgcaggactcctttatgctggt 3096  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  3095 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 3052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 92; Significance: 7e-45; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 13763 - 13906
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||| |||||||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  13763 ttgatagagttcacatacaacaacagttaccattcgagtattagtatggcaccgttcgaagccttgtatggtcggagatgcaggactcctttatgctggt 13862  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  13863 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 13906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 4815 - 4958
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || | ||||||||||||||||||||||||| | |||||||| |||||||| |||||||||||||||||||    
T  4815 ttgatagagttcacatacaacaacagttaccatttgagtattggtatggcaccgttcgaatctttgtatggtcggaggtgcaggactcctttatgctggt 4914  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||  | |||||||||||||||||||||||||||||||||    
T  4915 ttgagtcaagagagagtgttgtgttgggaccggatttggttcat 4958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 9945 - 10090
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||    
T  9945 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccattcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 10044  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||| |||||| || ||||||||||||||||||||||||||||||||    
T  10045 ttgggtcgggagaaagtgttgtgttgggaccggatttggttcatga 10090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 49069 - 49214
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  49069 ttgatagagttcacatacaacaacagttaccattcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcctttatgctggt 49168  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| || |||||||| ||||||||||| ||||||||||||||    
T  49169 ttgagtcaggagagagtgtggtgttgggaccagatttggttcatga 49214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 43227 - 43082
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||    
T  43227 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagcgttgtatggtcggaggtgtaggactcctctatgctggt 43128  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| || |||||||| |||||||||||||| |||||||||||    
T  43127 ttgagtcaggagagagtgtggtgttgggaccggacttggttcatga 43082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 19564 - 19419
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |||||    
T  19564 ttgatagagttcacatacaacaacagttatcattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttattctggt 19465  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    ||||||| ||  |||||||||| |||||||||||||||||||||||    
T  19464 ttgagtcaggatagagtgttgtattgggaccggatttggttcatga 19419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 14113 - 14253
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |||||    
T  14113 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatcctggt 14212  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggtt 144  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  14213 ttgagtcaggagagagtgttgtgttgggaccggatttggtt 14253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 118012 - 117869
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || ||||| || || || ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  118012 ttgatagagttcacatacaacaatagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgtaagactcctttatgttggt 117913  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  117912 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 117869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 323148 - 323005
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || || |||||||||||||||||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  323148 ttgatagagttcacatacaacaacagttaccattccagtattggtatggcaccgttcgaagctttgtatgatcggaggtgcaggactcctttatgctggt 323049  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||| || || ||||||||||||||||| |||||||||||||||    
T  323048 ttgaatcaggagagagtgttgtgttgggtccggatttggttcat 323005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 386263 - 386120
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||| |||| |||| |||||||| |||||||| |||||||| || || ||||    
T  386263 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcactgttctaagctttgtatggtcggaggtgcaggactccattgtgttggt 386164  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||| ||||||||||| ||||| ||||||    
T  386163 ttgagtcgggagaaagtgtagtgttgggaccagatttagttcat 386120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 203366 - 203461
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccg 135  Q
    ||||| || |||||||| ||| |||| |||||||| |||||||| || ||||  ||||| ||||||||||||||||||||||| ||||||||||||    
T  203366 agtataggaatggcaccattcaaagctttgtatggtcggaggtgcagaactctgttatgttggtttgagtcgggtgagagtgtagtgttgggaccg 203461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 11180 - 11068
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||  || |||||||| |||||||||||||    
T  11180 tcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcctttatgctggtttgagttaggagagagtgtggtgttgggaccgg 11081  T
Q  137 atttggttcatga 149  Q
    |||||||||||||    
T  11080 atttggttcatga 11068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 84; Significance: 4e-40; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 20427 - 20284
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || ||||| || || || ||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  20427 ttgatagagttcacatacaacaaaagttaccattcgagtattggtatgacaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 20328  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  20327 ttgagtcaggagagagtgttgtcttgggaccggatttggttcat 20284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 147
Target Start/End: Original strand, 13256 - 13366
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||||    
T  13256 tcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcatttatgctggtttgagtcaatagagagtgttgtgttgggaccgg 13355  T
Q  137 atttggttcat 147  Q
    | ||| |||||    
T  13356 aattgattcat 13366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 147
Target Start/End: Original strand, 17026 - 17136
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||||    
T  17026 tcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcatttatgctggtttgagtcaatagagagtgttgtgttgggaccgg 17125  T
Q  137 atttggttcat 147  Q
    | ||| |||||    
T  17126 aattgattcat 17136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 21533 - 21676
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  21533 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 21632  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || | | ||||||||||||||||||| |||||||||    
T  21633 ttgagtcaggagtgggtgttgtgttgggaccggacttggttcat 21676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 26250 - 26117
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| || |||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  26250 ttgatcgaatttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 26151  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    |||| || || || |||| | |||| ||||||||    
T  26150 ttgaatccggagaaagtgctttgtttggaccgga 26117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 1386 - 1529
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||||| | |||||||||||||||||    
T  1386 ttgatagagttcacatacaacaacagttaccattcgagtattggaatggcaccgttcgaagctttgtatggtcggaggtgcaagactcctttatgctggt 1485  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  1486 ttgagtcaggagagagtgttgtattgggaccggatttggttcat 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 6467 - 6355
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||| |||||||| | ||| || |||||||| ||||| || || ||||| || || ||||    
T  6467 ttgatagagttcacgtataataatagttatcattctagtattggaatggcaccttacgaggctttgtatggtcggagatgcagaactccgttgtgttggt 6368  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  6367 ttgagtctggtga 6355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 84; Significance: 4e-40; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 149014 - 148871
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||| ||| || || ||||||||||||||||| ||||||||| | |||||||| |||||||| |||||||||||||||||||    
T  149014 ttgatagagttcacatacaacagcagttaccattcgagtattggtatggctccgttcgaacctttgtatggtcggaggtgcaggactcctttatgctggt 148915  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  148914 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 148871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 195565 - 195708
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || ||  |||||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||||    
T  195565 ttgatagagttcacatacaacaacagttaccatccgagtattggtatggcaccgttcgaagctttatatggtcggaggtgcaggactcctttatgctggt 195664  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || ||||||||||||||||||||||| |||||||||    
T  195665 ttgagtcaggagagagtgttgtgttgggaccggacttggttcat 195708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 180368 - 180237
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| || ||||||||||| || || ||||||||  ||||||||||||| || || || ||||    
T  180368 ttgattgagtttacttacaacaacagttttcattctagtatcggaatggcaccgtttgaggctttgtatggtaggaggtgtaggacaccattgtgttggt 180269  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccg 135  Q
    ||||||| || || |||||| |||| ||||||    
T  180268 ttgagtccggagaaagtgttttgttaggaccg 180237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 1096 - 1241
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| || ||||| || || ||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  1096 ttgatagaatttacatacaataacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 1195  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    | ||| |||| || |||||||||||||| |||||||||||||||||    
T  1196 tcgagacgggagaaagtgttgtgttggggccggatttggttcatga 1241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 6592 - 6483
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggatt 139  Q
    |||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| |||||||| ||| || ||||||||||||||||||||||    
T  6592 agtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgcttgtttgagttgggagaaagtgttgtgttgggaccggatt 6493  T
Q  140 tggttcatga 149  Q
    ||||||||||    
T  6492 tggttcatga 6483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 6232 - 6344
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    |||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||    
T  6232 tcgagtataggtatggcatcgttcgaagctttgtatggtcggaggtgtaggactcctttatgctggtttgagtcagaagagagtgtggtgttgggaccgg 6331  T
Q  137 atttggttcatga 149  Q
    |||||||||||||    
T  6332 atttggttcatga 6344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 43916 - 43804
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| || |||||||| ||||||||| |||    
T  43916 tcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcctttatgctggtatgagtcaggagagagtgtggtgttgggaacgg 43817  T
Q  137 atttggttcatga 149  Q
    |||||||||||||    
T  43816 atttggttcatga 43804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 44928 - 44816
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| || |||||||| ||||||||| |||    
T  44928 tcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcctttatgctggtatgagtcaggagagagtgtggtgttgggaacgg 44829  T
Q  137 atttggttcatga 149  Q
    |||||||||||||    
T  44828 atttggttcatga 44816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 20533 - 20421
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    |||||||| |||||| ||  ||||||||| |||||| | ||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||    
T  20533 tcgagtataggtatgacattgttcgaagctttgtatagtcggaggtgtaggactcctttatgctggtttgagtcaggagagagtgtggtgttgggaccgg 20434  T
Q  137 atttggttcatga 149  Q
    |||||||||||||    
T  20433 atttggttcatga 20421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 5315 - 5459
Alignment:
Q  5 tgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtt 104  Q
    |||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| ||| |||| |||||||||||||||||||| || |||||    
T  5315 tgatagagttcacatacaacaacagttaccattcgagtataggtatggcaccgttcgaagctttggatggtcggaggtgtaggactcctttctgatggtt 5414  T
Q  105 tgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||| || |||||||| ||||||||||||||||||||||||||    
T  5415 tgagtcaggagagagtgtggtgttgggaccggatttggttcatga 5459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 52038 - 52186
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  52038 cctttgatagagttcacatacaacaacagttaccattcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgct 52137  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||| || ||||| || ||||||||| | ||||||||||||||    
T  52138 ggtttgagtcaggagagagggtggtgttgggatcagatttggttcatga 52186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 61072 - 61220
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  61072 cctttgatagagttcacatacaacaacagttaccattcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgct 61171  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||| || ||||| || ||||||||| | ||||||||||||||    
T  61172 ggtttgagtcaggagagagggtggtgttgggatcagatttggttcatga 61220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 67460 - 67608
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  67460 cctttgatagagttcacatacaacaacagttaccattcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgct 67559  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcatga 149  Q
    |||||||||| || ||||| || ||||||||| | ||||||||||||||    
T  67560 ggtttgagtcaggagagagggtggtgttgggatcagatttggttcatga 67608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 5657 - 5514
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||| |||||||||||||||| |||| |||||||| |||| ||| |||||||| ||||||||||    
T  5657 ttgatagagttcacatacaacaacagttaccattcgagtaatggtatggcaccgttcaaagctttgtatggtcggaagtgcaggactccgttatgctggt 5558  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  5557 ttgagtcaggagagagtgttgtgttgggaccggatttggttcat 5514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 27669 - 27526
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  27669 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 27570  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    | ||||| || || | ||||||||||||||| ||||||||||||    
T  27569 tcgagtcaggagaaaatgttgtgttgggaccagatttggttcat 27526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 47568 - 47425
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||| || ||||    
T  47568 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatgacaccgttcgaagctttgtatggtcggaggtgcaggactcctttgtgttggt 47469  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||||||||||||||||||||| ||||||    
T  47468 ttgagtcgggagaaagtgttgtgttgggaccggatttagttcat 47425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 260751 - 260609
Alignment:
Q  5 tgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtt 104  Q
    |||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||  |||||||||||    
T  260751 tgatagagttcacctacaacaacagttaccattcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactctgttatgctggtt 260652  T
Q  105 tgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||| || ||||||||||| |||||||||||||||||||||    
T  260651 tgagtcaggagagagtgttgtattgggaccggatttggttcat 260609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 27945 - 27820
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || ||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||||||||||||||||| || || ||||    
T  27945 aacaacagttaccattcgagtattggtatggcaccgttcgaagttttgtatggtcggaggtgcaggactcctttatgctggtttgagtcaggagaaagtg 27846  T
Q  122 ttgtgttgggaccggatttggttcat 147  Q
    ||||||||||||| |||| |||||||    
T  27845 ttgtgttgggaccagattcggttcat 27820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 37 - 147
Target Start/End: Original strand, 1044 - 1154
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||| |||| |||||||||||  | || | ||| ||||||||||| |    
T  1044 tcgagtattggtatggaaccgttcgaagctttgtatggtcggaggtgcaggactcctctatgttggtttgagtcaagagaaaatgtggtgttgggaccag 1143  T
Q  137 atttggttcat 147  Q
    |||| ||||||    
T  1144 atttagttcat 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 249024 - 248912
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    |||||||| |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||     
T  249024 tcgagtataggtatggcaccgttcgaagctttgtatggtaggaggtgtaggactcctttatgctggtttgagtcaggagagagtgtggtgttgggaccga 248925  T
Q  137 atttggttcatga 149  Q
    | |||||||||||    
T  248924 acttggttcatga 248912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 333 - 190
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||| | || || ||||||||| ||||||||||||||||||| || ||||| |||||||| |||| ||||||||||||||    
T  333 ttgatagagttcacatacaacaaccgttaccattcgagtatttgtatggcaccgttcgaagctttatatggtcggaggtgcaggaatcctttatgctggt 234  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || |||||||||||||||||||| ||||||||||||    
T  233 ttgagtcaggagagagtgttgtgttgggaccagatttggttcat 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 7100 - 7243
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || || |||||||||||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||    
T  7100 ttgatagagttcacgtacaacaacagttaccattcaagtattggtatggcgccgttcgaagctttatatggtcggaggtgcaggactcctttatgctggt 7199  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||| ||| || ||| |||||||||||||||||||||||||||||    
T  7200 ttgtgtcaggagagggtgttgtgttgggaccggatttggttcat 7243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 12643 - 12786
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||| ||||||| |||||||||||    
T  12643 ttgatagagttcacctacaacaacagttaccattcgagtataggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcttttatgctggt 12742  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || ||||||||||| || ||||| ||||||||||||    
T  12743 ttgagtcaggagagagtgttgtattaggaccagatttggttcat 12786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 261 - 404
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  261 ttgatagagttcacatacaacaacagttaccattcgagtatcggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcatttatgctggt 360  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||    ||||||||||||||||||||||| ||| |||||    
T  361 ttgagtcaatagagagtgttgtgttgggaccggaattgattcat 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 11299 - 11189
Alignment:
Q  37 tcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccgg 136  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||||    
T  11299 tcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgtaggactcatttatgctggtttgagtcaatagagagtgttgtgttgggaccgg 11200  T
Q  137 atttggttcat 147  Q
    | ||| |||||    
T  11199 aattgattcat 11189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 7672 - 7778
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  7672 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 7771  T
Q  104 ttgagtc 110  Q
    |||||||    
T  7772 ttgagtc 7778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 25727 - 25866
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| | || ||||||||||||||    
T  25727 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaagaatcctttatgctggt 25826  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggt 143  Q
    ||||||  || |||||||||||| ||||||||||||||||    
T  25827 ttgagttaggagagagtgttgtgctgggaccggatttggt 25866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 10237 - 10094
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||    
T  10237 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcagaactcctttatgttggt 10138  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||| |||| || ||||| ||||||||||| ||||| ||||||    
T  10137 ttgagacgggagaaagtgtggtgttgggaccagatttagttcat 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 31854 - 31711
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || |||||||||| |||||||||||||||||| |||||||| |||||||| | |||||||||||||||||    
T  31854 ttgatagagttcacgtacaacaacagttaccattcgagtattgatatggcaccgttcgaagctttgtatggtcggaggtgcatgactcctttatgctggt 31755  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||  || || || |||||||||||| ||||||||||||||    
T  31754 ttgagttaggagaaagcgttgtgttgggatcggatttggttcat 31711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 51725 - 51868
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||| ||||||||||||| |||||| | |||||||| | ||||||||| || ||||    
T  51725 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatgacaccgttcgaagctttgtatagtcggaggtgcatgactcctttgtgttggt 51824  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||| ||||||||||||||||||||||||    
T  51825 ttgagtcgggagaaagtgtagtgttgggaccggatttggttcat 51868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 95882 - 96009
Alignment:
Q  22 aacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtg 121  Q
    |||||||| || || |||||||||||||||||||| |||||||| || ||||| ||||||||||| |||||| |||| |||||||||||||| || ||||    
T  95882 aacaacagttaccattcgagtattggtatggcaccattcgaagctttatatggtcggaggtgtagaactcctctatgttggtttgagtcgggagaaagtg 95981  T
Q  122 ttgtgttgggaccggatttggttcatga 149  Q
    |||||||||| ||||| |||||||||||    
T  95982 ttgtgttggggccggacttggttcatga 96009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 113003 - 112873
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| |||||||| || ||||| || |||||||| || ||||    
T  113003 ttgatagagtttacttacaacaacagttaccattcgagtattggtatggcaccgtttgaagcattgtatggtcgaaggtgcagaactcctttgtgttggt 112904  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||| ||||| || |||||  ||||||||||    
T  112903 ttgaatcgggggaaagtgtgatgttgggacc 112873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 4319 - 4176
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || | ||||||||||||||||||||||||||| | |||||| |||||||| ||||||||||| || ||||    
T  4319 ttgatagagttcacgtacaacaacagttaccatttgagtattggtatggcaccgttcgaagcttcgtatggtcggaggtgcaggactcctttgtgttggt 4220  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || ||||| ||||||||||| ||||| ||||||    
T  4219 ttgagtcgggagaaagtgtagtgttgggaccagatttagttcat 4176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 5194 - 5051
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| | |||||| || ||||||||||  ||||    
T  5194 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcagaggtgcagaactcctttataatggt 5095  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || || ||||| ||||||||||| ||||||||||||    
T  5094 ttgagtcaggagaaagtgtggtgttgggaccagatttggttcat 5051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 37646 - 37503
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||  || || |||||||||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| || ||||    
T  37646 ttgatggagttcacgtacaacaacaattaccattcgagtattggtatcgcaccgttcgaagctttgtatggtcggaggtgcaggacccctttgtgttggt 37547  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || || | ||||||||||||||||||||||||||||    
T  37546 ttgagtcaggagaaactgttgtgttgggaccggatttggttcat 37503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 38107 - 38173
Alignment:
Q  76 cggaggtgtaggactcctttatgctggttt-gagtcgggtgagagtgttgtgttgggaccggatttg 141  Q
    |||||||| ||||||||||||||||||||| ||||| || || ||||||||||||||||||||||||    
T  38107 cggaggtgcaggactcctttatgctggttttgagtcaggagaaagtgttgtgttgggaccggatttg 38173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 90795 - 90937
Alignment:
Q  5 tgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtt 104  Q
    |||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||| |||||    
T  90795 tgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcagaactcctttatgttggtt 90894  T
Q  105 tgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||| || || ||||| | ||||||||| ||||| ||||||    
T  90895 tgagtcaggagaaagtgtagcgttgggaccagatttagttcat 90937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 114594 - 114545
Alignment:
Q  34 cactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtg 83  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  114594 cactcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtg 114545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 2238 - 2101
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || ||| |||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||    
T  2238 ttgatagagttcacgtacaactacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaggactcctttatgttggt 2139  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttg 141  Q
    | ||||| || || ||||| ||||||||||| ||||||    
T  2138 tcgagtcaggagaaagtgtggtgttgggaccagatttg 2101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 5776 - 5917
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| || ||||| || || ||||    
T  5776 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcagaactccattgtgttggt 5875  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttc 145  Q
    |||||||||| || ||||| ||||||||||| ||||| ||||    
T  5876 ttgagtcgggagaaagtgtagtgttgggaccagatttagttc 5917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 26586 - 26443
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || || |||||||||||||||||||||||||| |||||||| |||||||| | ||||||||| ||  |||    
T  26586 ttgatagagttcacgtacaacaacagttaccattctagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaagactcctttgtgtcggt 26487  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||| || | ||| ||||||||| ||||||||||||||    
T  26486 ttgagtcgggagaaaatgtagtgttgggagcggatttggttcat 26443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 26968 - 26859
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || || |||||||||||||||||||||||||| |||||||| |||||||| | ||||||||| ||  |||    
T  26968 ttgatagagttcacgtacaacaacagttaccattcaagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaagactcctttgtgtcggt 26869  T
Q  104 ttgagtcggg 113  Q
    ||||||||||    
T  26868 ttgagtcggg 26859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 312 - 171
Alignment:
Q  5 tgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtt 104  Q
    |||| ||||| || || |||||||| || || |||||||||| ||||| || ||||||||| |||||||| |||||||| |||||||| ||||| |||||    
T  312 tgatagagttcacgtacaacaacagttaccattcgagtattgttatggaac-gttcgaagctttgtatggtcggaggtgcaggactccattatgttggtt 214  T
Q  105 tgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||| || || ||||| ||||||||||||||||||||||||    
T  213 tgagtcaggagaaagtgtagtgttgggaccggatttggttcat 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 972 - 842
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || || ||||| || || ||||||||||||||||| || |||||||| |||||||| |||||||| |||||||||||||||||||    
T  972 ttgatagagttcacatacaataacagttaccattcgagtattggtatggctcctttcgaagctttgtatggtcggaggtgcaggactcctttatgctggt 873  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||||||| || |||||  ||||||||||    
T  872 ttgagtcgggagaaagtgtgatgttgggacc 842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 33539 - 33669
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||||||||| ||||| || || || ||||||||||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||    
T  33539 ttgatagagtttacttacaacaatagttaccattcgagtattggtatggcaccgtttgaagccttgtatggtcgaaggtgcagaactcctttgtgttggt 33638  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||||||| || |||||  ||||||||||    
T  33639 ttgagtcgggagaaagtgtgatgttgggacc 33669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 40702 - 40599
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  40702 ttgattgagtttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 40603  T
Q  104 ttga 107  Q
    ||||    
T  40602 ttga 40599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 63; Significance: 1e-27; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 50376 - 50506
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||||||||| ||||| || || || ||||||||||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||    
T  50376 ttgatagagtttacttacaacaatagttaccattcgagtattggtatggcaccgtttgaagccttgtatggtcgaaggtgcagaactcctttgtgttggt 50475  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||||||| || |||||  ||||||||||    
T  50476 ttgagtcgggggaaagtgtgatgttgggacc 50506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 106435 - 106538
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| |||||||| ||||| || || ||||||||  ||||||||||||| || || || ||||    
T  106435 ttgattgagtttacttacaacaacagttttcattctagtatcggtatggctccgtttgaggctttgtatggttggaggtgtaggacaccgttgtgttggt 106534  T
Q  104 ttga 107  Q
    ||||    
T  106535 ttga 106538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 43598 - 43486
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| ||||| || || |||||||| || |||||||| |||||||| ||||| || || ||||  ||||| || || ||||| || |||||||    
T  43598 ttgatcgagttcacttacaataatagctatcattctagtattggaatggcacctttcgaggctttatatgttcggagatgcagaactccgttgtgctggt 43499  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  43498 ttgagtcaggtga 43486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 18399 - 18542
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| |  ||||||||||| || |    
T  18399 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcaaaactcctttatgttgat 18498  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| || || ||||| | ||||||||| ||||| ||||||    
T  18499 ttgagtcaggagaaagtgtagagttgggaccagatttagttcat 18542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 10610 - 10732
Alignment:
Q  12 gtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcg 111  Q
    |||||| || |||||||| || || ||||||||||||||||||||||||||||| |||| ||| |||||||| || ||||| ||| | ||||||||||||    
T  10610 gtttacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtgtggtcggaggtgcagaactccgttacgttggtttgagtcg 10709  T
Q  112 ggtgagagtgttgtgttgggacc 134  Q
    ||||| |||||  ||||||||||    
T  10710 ggtgaaagtgtaatgttgggacc 10732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 40185 - 40040
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgct 100  Q
    |||||||| ||||| || || |||||||| || || ||||||||||||||| ||  ||| |||||  ||||||| |||||||| || ||||||||||| |    
T  40185 cctttgatagagttcacgtacaacaacagttaccattcgagtattggtatgacaatgtttgaagctctgtatggtcggaggtgcag-actcctttatgtt 40087  T
Q  101 ggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||||||||| || ||||| || |||||||||||||||||||||    
T  40086 ggtttgagtcgggagaaagtgtggtattgggaccggatttggttcat 40040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 11078 - 11123
Alignment:
Q  150 tgtaacgccctagttgtt-tatttaattaatttgaactatgtggag 194  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||    
T  11078 tgtaacgccctagttattatatttaattaatttgaattatgtggag 11123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 24933 - 25067
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| ||||| || |||||| | ||| |||| |||||||| ||| |||| |||||||| || ||||| || || ||||    
T  24933 ttgatagagttcacgtacaacaacagttatcattctagtatttggatgacaccattcgaagctttgcatggtcggaggtgcagaactccgttctgttggt 25032  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggat 138  Q
    ||||||||||||| ||||| |||||||||||||||    
T  25033 ttgagtcgggtgaaagtgtagtgttgggaccggat 25067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 28630 - 28760
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| || ||||  ||||  | ||    
T  28630 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcagaactctgttatctttgt 28729  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||| |||||| ||||  |||||||||||    
T  28730 ttgagttgggtgacagtgcagtgttgggacc 28760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 40621 - 40751
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || |||||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| || ||||  ||||  | ||    
T  40621 ttgatagagttcacgtacaacaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcagaactctgttatctttgt 40720  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||| |||||| ||||  |||||||||||    
T  40721 ttgagttgggtgacagtgcagtgttgggacc 40751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 23838 - 23705
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||  | |||  | ||||| || ||||||||||| || || |||||||| |||||||||||||| || ||||| ||||    
T  23838 ttgattgagtttacttacaacaacatttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttatgttggt 23739  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  23738 ttgagtctggagagagtgctttgttaggaccgga 23705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 46598 - 46465
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| || ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  46598 ttgattgagtttacttacaacaacagttttcatgctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 46499  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  46498 ttgagtccggagagagtgctttgttaggaccgga 46465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 93 - 8
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggac 89  Q
    ||||||||||||||||| |||||||| | ||| || ||||| |||||||||||||| || ||||||||||| ||||||||||||||    
T  93 ttgattgagtttacttacaacaacagttttcattctagtatcggtatggcaccgtttgaggccttgtatggtcggaggtgtaggac 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 71663 - 71530
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| || ||||||||||| || || |||||||| |||||||||||||| |  || || ||||    
T  71663 ttgattgagtttacttacaacaacagttttcattctagtatcggaatggcaccgtttgaggctttgtatggtcggaggtgtaggacactgttgtgttggt 71564  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    |||| || || || ||||||||||| ||||||||    
T  71563 ttgaatctggagaaagtgttgtgttaggaccgga 71530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 6898 - 7041
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||||||||  || || |||||||||||||||  |||||||||||| |||||||| |||||||| || ||||  || || ||||    
T  6898 ttgatagagttcacgtataacaacaattaccattcgagtattggtatgataccgttcgaagcattgtatggtcggaggtgcagaactcaattgtgttggt 6997  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||||   || ||||| ||||||||||| ||||| ||||||    
T  6998 ttgagtcgacagaaagtgtggtgttgggaccagatttagttcat 7041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 19287 - 19166
Alignment:
Q  10 gagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagt 109  Q
    ||||||||||| ||||| || || || ||||||||||||||||||||||| ||||| |||||||| || || || || |||||||| || ||||| ||||    
T  19287 gagtttacttacaacaatagttaccattcgagtattggtatggcaccgtttgaagcattgtatggtcgaagatgcagaactcctttgtgttggttcgagt 19188  T
Q  110 cgggtgagagtgttgtgttggg 131  Q
    |||| || |||||  |||||||    
T  19187 cgggagaaagtgtgatgttggg 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 23449 - 23328
Alignment:
Q  10 gagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagt 109  Q
    ||||||||||| ||||| || || || ||||||||||||||||||||||| ||||| |||||||| || || || || |||||||| || ||||| ||||    
T  23449 gagtttacttacaacaatagttaccattcgagtattggtatggcaccgtttgaagcattgtatggtcgaagatgcagaactcctttgtgttggttcgagt 23350  T
Q  110 cgggtgagagtgttgtgttggg 131  Q
    |||| || |||||  |||||||    
T  23349 cgggagaaagtgtgatgttggg 23328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 136354 - 136269
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggac 89  Q
    ||||| ||||| || || |||||||| ||  | ||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  136354 ttgatagagttcacatacaacaacagttacaattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgtaggac 136269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 3737 - 3840
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  3737 ttgattgagtttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccattgtgttggt 3836  T
Q  104 ttga 107  Q
    ||||    
T  3837 ttga 3840  T

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Target: scaffold0249 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 4912 - 5007
Alignment:
Q  52 gcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    |||||||||||||| |||||||| |||||||| ||||||||||| || |||||||||| ||| || ||||| ||||||| |||  |||| ||||||    
T  4912 gcaccgttcgaagctttgtatggtcggaggtgcaggactcctttgtgttggtttgagtggggagaaagtgtggtgttggaaccatatttagttcat 5007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 12839 - 12969
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| ||||| || || || |||||||| |||||||| ||||||||  ||||||| ||||||||||||||||| || || ||||    
T  12839 ttgatagagttcacatataataacagttaccattctagtattggaatggcaccattcgaagctctgtatggtcggaggtgtaggactccattgtgttggt 12938  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    | ||||| ||| ||||||  || ||||||||    
T  12939 tcgagtcaggttagagtgcagttttgggacc 12969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 25581 - 25711
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || || ||||| ||||| || |||||||| |||||||| |||||||| |||||||| | || |||||| ||||| || || ||||    
T  25581 ttgatagagttcacgtacaataacagttatcattctagtattggaatggcaccattcgaagctttgtatggtcagaagtgtagaactccgttgtgttggt 25680  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    | ||||| ||||||||||| || ||||||||    
T  25681 tcgagtcaggtgagagtgtagttttgggacc 25711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 98459 - 98329
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||  |||||||| | |||  | ||||| ||||||| |||||| || |  |||||||| |||||||||||||| || || || ||||    
T  98459 ttgattgagtttactttcaacaacagttttcatgctagtatcggtatggtaccgtttgaggttttgtatggtcggaggtgtaggacaccgttgtgttggt 98360  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    ||||||| || ||||||||| |||| |||||    
T  98359 ttgagtccggagagagtgttttgttaggacc 98329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 116767 - 116897
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || || || ||||| ||||| || |||||||| ||| |||| || ||||   ||||||| ||||||||||||||||  || || ||||    
T  116767 ttgatagagttgacgtacaataacagttatcattctagtattggaatgacaccatttgaagttctgtatggtcggaggtgtaggactctgttgtgttggt 116866  T
Q  104 ttgagtcgggtgagagtgttgtgttgggacc 134  Q
    | ||||| ||||||||||| || ||||||||    
T  116867 tcgagtcaggtgagagtgtagttttgggacc 116897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 248 - 381
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||  | ||| ||  |||| || |||||||| || || || |||||||| |||||||||||||| || || || ||||    
T  248 ttgattgagtttacttacaacaacaattttcattcttgtatcggaatggcaccatttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 347  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| ||||| |||| | |||| ||||||||    
T  348 ttgagtccggtgaaagtgctttgttaggaccgga 381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 216 - 349
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| ||||||||||| || || || |||| ||| || ||||||||||| |  ||||| ||||    
T  216 ttgattgagtttacttacaacaacagttttcattctagtatcggtatggcaccatttgaggctttgtgtggtcgaaggtgtaggacgcggttatgttggt 315  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    |||| || ||||| |||| | |||| ||||||||    
T  316 ttgattcaggtgaaagtgctttgttaggaccgga 349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 7612 - 7479
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||  | ||| || |||||||| ||||||||||| ||  | |||||||| ||||| || || ||||| || || ||||    
T  7612 ttgattgagtttacttacaacaacaattttcattctagtattggaatggcaccgtttgagactttgtatggtcggagatgcagaactccgttgtgttggt 7513  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| ||||| |||| | |||| ||||||||    
T  7512 ttgagtcaggtgaaagtgctttgttaggaccgga 7479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 3806 - 3923
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | | | || ||||| || ||||| ||||| || || |||||||| |||||||||||||| || || || ||||    
T  3806 ttgattgagtttacttacaacaacagtttttattctagtatcggcatggctccgtttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 3905  T
Q  104 ttgagtcgggtgagagtg 121  Q
    ||||||| || |||||||    
T  3906 ttgagtccggagagagtg 3923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 3235 - 3151
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtagga 88  Q
    ||||| ||||| || || || ||||| || || ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  3235 ttgatagagttcacgtacaagaacagttaccattcgagtattggtatggcaccgttcgaagctttgtatggtcggaggtgcagga 3151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 14581 - 14478
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| |||||||| || || || || |||||||| |||||||||||||| || || || ||||    
T  14581 ttgattgagtttacttacaacaacagttttcattctagtatcggtatggcgccatttgaggctttgtatggtcggaggtgtaggacaccgttgtgttggt 14482  T
Q  104 ttga 107  Q
    ||||    
T  14481 ttga 14478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 13352 - 13249
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    |||||||||||||| || |||||||| | ||| || ||||| |||||||||||||| || || |||||||| | |||||||||||| || || || ||||    
T  13352 ttgattgagtttacctacaacaacagttttcattctagtatcggtatggcaccgtttgaggctttgtatggtcagaggtgtaggacaccattgtgttggt 13253  T
Q  104 ttga 107  Q
    ||||    
T  13252 ttga 13249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 1316 - 1222
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggacc 134  Q
    |||||||| |||||||| |||||||| ||||||||  ||||||| || ||||  || || ||||||||||| ||||||||||| || ||||||||    
T  1316 agtattggaatggcaccattcgaagctttgtatggttggaggtgcagaactctgttgtgttggtttgagtcaggtgagagtgtagttttgggacc 1222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 1104 - 1174
Alignment:
Q  77 ggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggatttggttcat 147  Q
    ||||||| ||||||||||| || ||||| ||||| || || |||||| |||||||||||||||||||||||    
T  1104 ggaggtgcaggactcctttgtgttggttcgagtcaggagaaagtgttatgttgggaccggatttggttcat 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 916 - 1049
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | |||  | |||||  | ||||||||||| || || |||||||| |||||||||||||| ||  | || ||||    
T  916 ttgattgagtttacttacaacaacagttttcatacaagtatcagaatggcaccgtttgaggctttgtatggtcggaggtgtaggacaccaatgtgttggt 1015  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||  ||||| |||| | |||| ||||||||    
T  1016 ttgagttaggtgaaagtgctttgttaggaccgga 1049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3606 - 3533
Alignment:
Q  1 cctttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatgg 74  Q
    |||||||||||||||||||| |||||||| | ||| || ||||| |||||||||||||| || || ||||||||    
T  3606 cctttgattgagtttacttacaacaacagttttcattctagtatcggtatggcaccgtttgaggctttgtatgg 3533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 14967 - 14834
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||| ||| |||||||| | ||| ||  |||| |||||||||||||| || || |||||||| | |||||||||||   | || || | ||    
T  14967 ttgattgagtttagttacaacaacagttttcattcttgtatcggtatggcaccgtttgaggctttgtatggtccgaggtgtaggatgtcgttgtgtttgt 14868  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| ||||| |||||| |||| ||||||||    
T  14867 ttgagtcaggtgaaagtgttttgttaggaccgga 14834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 26019 - 26104
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggac 89  Q
    ||||||||||||||||| |||||||| | |||  | ||||| |||||||||||||| || || |||||||| | ||||||||||||    
T  26019 ttgattgagtttacttacaacaacagttttcatgctagtatcggtatggcaccgtttgaggctttgtatggtccgaggtgtaggac 26104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 18495 - 18410
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggac 89  Q
    ||||||||||||||||| |||||||| | ||| || |||||  ||||||||||||| || || |||||||| | ||||||||||||    
T  18495 ttgattgagtttacttacaacaacagttttcattctagtatcagtatggcaccgtttgaggctttgtatggacagaggtgtaggac 18410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 15100 - 14968
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || ||||| | ||| |||||||| || |  ||||||||  ||||||||||||| || || || ||||    
T  15100 ttgattgagtttacttacaacaacagttttcattctagtatcgatatagcaccgtttgaggttttgtatggtaggaggtgtaggacaccgttgtg-tggt 15002  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccgga 137  Q
    ||||||| || ||||||| | |||| ||||||||    
T  15001 ttgagtccggagagagtgctttgttaggaccgga 14968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 43982 - 43876
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||| | ||| || |||||  ||||||||||||| || || ||||||||  ||||||||| ||| ||  | || ||||    
T  43982 ttgattgagtttacttacaacaacagttttcattctagtatcagtatggcaccgtttgaggctttgtatggtaggaggtgtatgacaccgctgtgttggt 43883  T
Q  104 ttgagtc 110  Q
    |||||||    
T  43882 ttgagtc 43876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 3005 - 2961
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||    
T  3005 tgtaaagccctagttgtttatttaattaatttgaattatgtggag 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 28128 - 28259
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||||||||| |||||||  | |||  | ||||| |||||| ||||||| || || ||||||||  | ||||||||||| || || || ||||    
T  28128 ttgattgagtttacttacaacaacaattttcatgctagtatcggtatgacaccgtttgaggctttgtatggtagaaggtgtaggacaccattgtgttggt 28227  T
Q  104 ttgagtcgggtgagagtgttgtgttgggaccg 135  Q
    ||||||| ||||| |||| | |||| ||||||    
T  28228 ttgagtcaggtgaaagtgctttgttaggaccg 28259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 4281 - 4199
Alignment:
Q  58 ttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgggaccggattt 140  Q
    |||||||| |||||||| || ||||| ||||||||| |||  |||||||||||  | || ||||| |||||||||||||||||    
T  4281 ttcgaagctttgtatggtcgaaggtgcaggactcctatatattggtttgagtcaagagaaagtgtagtgttgggaccggattt 4199  T

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Target: scaffold0457 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 10995 - 11037
Alignment:
Q  149 atgtaacgccctagttgtttatttaattaatttgaactatgtg 191  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  10995 atgtaacgccctagttgtttatttaattgatttgatctatgtg 11037  T

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Target: scaffold0454 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 7377 - 7271
Alignment:
Q  10 gagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagt 109  Q
    ||||| || ||||| || || ||||| || |||||||| |||||||| ||||| || || ||||| ||||| ||||| ||||| || |||||||||||||    
T  7377 gagttcacatataataatagttatcattcaagtattggaatggcacctttcgaggctttatatggtcggagatgtagaactccgttgtgctggtttgagt 7278  T
Q  110 cgggtga 116  Q
    | |||||    
T  7277 caggtga 7271  T

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Target: scaffold0546 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 4294 - 4379
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| || ||||| |||||||| ||||| || || ||||| || |||||||||||||| |||||    
T  4294 tatcattctagtattggaatggcaccttttgaagctttgtatggtcggagatgcagaactccattgtgctggtttgagtcaggtga 4379  T

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Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 9013 - 8928
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| || ||||| |||||||| ||||| || || ||||| || |||||||||||||| |||||    
T  9013 tatcattctagtattggaatggcaccttttgaagctttgtatggtcggagatgcagaactccattgtgctggtttgagtcaggtga 8928  T

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Target: scaffold0109; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 33462 - 33547
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    ||||| || |||||||| |||||||| || ||||| ||||||||  |||| || || ||||| || |||||||||||||| |||||    
T  33462 tatcattctagtattggaatggcaccttttgaagctttgtatggttggagatgcagaactccattgtgctggtttgagtcaggtga 33547  T

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Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 51417 - 51372
Alignment:
Q  149 atgtaacgccctagttgtttatttaattaatttgaactatgtggag 194  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||    
T  51417 atgtaacgccctagttatttatttaattattttaaactatgtggag 51372  T

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Target: scaffold0411 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 14968 - 15071
Alignment:
Q  31 tatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttgtgttgg 130  Q
    ||||| || |||||||| |||||||| || |||||  ||||||| |||||||| || ||| | || || ||||| ||||| ||||||||||| || ||||    
T  14968 tatcattctagtattggaatggcaccatttgaagctctgtatggtcggaggtgcagaacttcgttgtgttggttcgagtcaggtgagagtgtagttttgg 15067  T
Q  131 gacc 134  Q
    ||||    
T  15068 gacc 15071  T

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Target: scaffold0323 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 5160 - 5227
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgta 71  Q
    ||||| ||||| || || |||||||| || || |||||||||||||||||| |||||||||| |||||    
T  5160 ttgatagagttcacatacaacaacagttaccattcgagtattggtatggcatcgttcgaagctttgta 5227  T

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Target: scaffold0730 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 5453 - 5567
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||||||||| || ||||| ||||| || || || || ||||| ||| ||||||||||||| |||| ||| ||||| || || ||||| || || ||||    
T  5453 ttgattgagttcacgtataataacagttaccattctagcattggaatgacaccgttcgaagcgttgtttggtcggagatgcagaactccgttgtgttggt 5552  T
Q  104 ttgagtcgggtgaga 118  Q
     |||||| |||||||    
T  5553 atgagtccggtgaga 5567  T

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Target: scaffold0137 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 25115 - 25149
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttgaa 184  Q
    ||||||||||||||| |||||||||||||||||||    
T  25115 tgtaacgccctagttatttatttaattaatttgaa 25149  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 3548 - 3466
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgt 122  Q
    |||||||| |||||||| ||||| || |||||||||||||| || || ||||| || || | |||||||||  ||||||||||    
T  3548 agtattggaatggcaccattcgaggctttgtatggccggagatgcagaactccattgtgttagtttgagtcaagtgagagtgt 3466  T

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Target: scaffold1026 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 640 - 595
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  640 tgtaacgccctagttatttatttaattaattttaaactatgtggag 595  T

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Target: scaffold0359 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 17410 - 17301
Alignment:
Q  25 aacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgttg 124  Q
    ||||| ||||| || || ||||| |||||||| || || ||  ||||||| ||||||||||| ||||| || || ||||| ||||| ||||||| ||| |    
T  17410 aacagttatcattctagcattggaatggcaccttttgaggctctgtatggtcggaggtgtagaactccgttgtgttggttcgagtcaggtgagattgtag 17311  T
Q  125 tgttgggacc 134  Q
    | ||||||||    
T  17310 ttttgggacc 17301  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 443 - 398
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaa-tttgaactatgtggag 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  443 tgtaacgccctagttatttatttaattaattttaaactatgtggag 398  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 1286 - 1403
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    |||||| |||| ||||| |||||||| | ||| || ||||| || ||| ||||||| || || |||||||| | |||||||||||| || || || | ||    
T  1286 ttgattaagttcacttacaacaacagttttcattctagtatcggaatgacaccgtttgaggctttgtatggactgaggtgtaggacaccgttgtgttagt 1385  T
Q  104 ttgagtcgggtgagagtg 121  Q
    ||||||| ||||| ||||    
T  1386 ttgagtcaggtgaaagtg 1403  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 62796 - 62841
Alignment:
Q  150 tgtaacgccctagttgtttatttaattaatttga-actatgtggag 194  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||    
T  62796 tgtaacgccctagttatttatttaattaattttatactatgtggag 62841  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 4337 - 4434
Alignment:
Q  25 aacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgt 122  Q
    ||||| ||||| || |||||||| |||||||| || || || ||||||||  |||  ||||| |||||||| || ||||| ||||| |||||||||||    
T  4337 aacagttatcattctagtattggaatggcaccatttgaggctttgtatggttggatttgtagaactcctttgtgttggttcgagtcaggtgagagtgt 4434  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 127082 - 127179
Alignment:
Q  25 aacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtgagagtgt 122  Q
    ||||| ||||| || |||||||| |||||||| || || || |||||||| ||||| || || ||||| || || |||||| |||| |||||||||||    
T  127082 aacagttatcattctagtattggaatggcaccttttgaggctttgtatggtcggagatgcagaactccgttgtgttggtttaagtcaggtgagagtgt 127179  T

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Target: scaffold0894 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 1583 - 1471
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| || ||||| || || ||||| || |||||||  |||||||| |  || || |||||||| ||||| ||||| ||||| || || ||||    
T  1583 ttgatagagttcacgtataataatagttatcattctagtattgaaatggcaccttatgaggctttgtatggtcggagatgtagaactccgttgtgttggt 1484  T
Q  104 ttgagtcgggtga 116  Q
    |||||||||||||    
T  1483 ttgagtcgggtga 1471  T

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Target: scaffold0216 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 678 - 754
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  678 agtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccattgtgctggtttgagtcaggtga 754  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 1028 - 952
Alignment:
Q  40 agtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggtttgagtcgggtga 116  Q
    |||||||| |||||||| ||||| || || ||||| ||||| || || ||||| || |||||||||||||| |||||    
T  1028 agtattggaatggcacctttcgaggctttatatggtcggagatgcagaactccgttgtgctggtttgagtcaggtga 952  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 46672 - 46560
Alignment:
Q  4 ttgattgagtttacttataacaacagctatcactcgagtattggtatggcaccgttcgaagccttgtatggccggaggtgtaggactcctttatgctggt 103  Q
    ||||| ||||| ||||| || || || ||||| || |||||||| |||||||| ||||| || || |||||  |||| || || ||||| || |||||||    
T  46672 ttgatcgagttcacttacaataatagttatcattctagtattggaatggcacctttcgaggctttatatggtaggagatgcagaactccgttgtgctggt 46573  T
Q  104 ttgagtcgggtga 116  Q
    ||||||| |||||    
T  46572 ttgagtcaggtga 46560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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