View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12515_high_17 (Length: 335)

Name: NF12515_high_17
Description: NF12515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12515_high_17
NF12515_high_17
[»] chr2 (19 HSPs)
chr2 (86-321)||(31378864-31379099)
chr2 (11-77)||(20279332-20279398)
chr2 (11-79)||(11873679-11873747)
chr2 (11-77)||(38084468-38084534)
chr2 (11-76)||(18289-18354)
chr2 (11-76)||(18500226-18500291)
chr2 (11-77)||(36735332-36735398)
chr2 (11-77)||(5874252-5874318)
chr2 (11-76)||(5871111-5871176)
chr2 (33-76)||(22518985-22519028)
chr2 (11-54)||(29586096-29586139)
chr2 (23-77)||(12370466-12370520)
chr2 (38-77)||(13038973-13039012)
chr2 (38-77)||(39649665-39649704)
chr2 (26-76)||(21064686-21064736)
chr2 (38-76)||(44299959-44299997)
chr2 (38-76)||(45499002-45499040)
chr2 (32-77)||(25036877-25036922)
chr2 (32-77)||(25040984-25041029)
[»] chr3 (45 HSPs)
chr3 (11-79)||(16031259-16031327)
chr3 (11-76)||(13111787-13111852)
chr3 (11-76)||(14893146-14893211)
chr3 (11-76)||(21638561-21638626)
chr3 (12-76)||(4313596-4313660)
chr3 (14-76)||(261364-261426)
chr3 (11-77)||(14888041-14888107)
chr3 (11-76)||(13105639-13105704)
chr3 (11-76)||(14881315-14881380)
chr3 (11-76)||(23288122-23288187)
chr3 (11-76)||(11180760-11180825)
chr3 (15-76)||(48060734-48060795)
chr3 (14-76)||(68145-68207)
chr3 (14-76)||(74238-74300)
chr3 (11-76)||(3404752-3404817)
chr3 (11-76)||(30102452-30102517)
chr3 (11-75)||(12550412-12550476)
chr3 (17-76)||(49967354-49967413)
chr3 (11-77)||(8606161-8606227)
chr3 (11-76)||(8612622-8612687)
chr3 (26-74)||(37470141-37470189)
chr3 (33-76)||(18706267-18706310)
chr3 (26-76)||(13086554-13086604)
chr3 (11-76)||(13509414-13509479)
chr3 (11-76)||(15610489-15610554)
chr3 (41-78)||(33814598-33814635)
chr3 (38-78)||(11630010-11630050)
chr3 (33-81)||(43097556-43097604)
chr3 (38-77)||(15537759-15537798)
chr3 (38-77)||(21607451-21607490)
chr3 (38-77)||(46371171-46371210)
chr3 (38-76)||(5651851-5651889)
chr3 (38-76)||(8804203-8804241)
chr3 (38-76)||(8812603-8812641)
chr3 (38-76)||(15529069-15529107)
chr3 (26-76)||(20604005-20604055)
chr3 (14-76)||(30068681-30068743)
chr3 (26-76)||(37256110-37256160)
chr3 (26-76)||(37265946-37265996)
chr3 (38-76)||(46385299-46385337)
chr3 (11-76)||(15579439-15579504)
chr3 (50-79)||(19833442-19833471)
chr3 (32-76)||(3675478-3675522)
chr3 (32-76)||(3683869-3683913)
chr3 (45-77)||(11325852-11325884)
[»] scaffold0351 (1 HSPs)
scaffold0351 (11-77)||(7641-7707)
[»] scaffold0290 (1 HSPs)
scaffold0290 (11-77)||(22045-22111)
[»] scaffold0167 (1 HSPs)
scaffold0167 (11-77)||(7979-8045)
[»] scaffold0027 (2 HSPs)
scaffold0027 (11-77)||(23582-23648)
scaffold0027 (26-78)||(405-457)
[»] chr6 (34 HSPs)
chr6 (11-77)||(12667538-12667604)
chr6 (11-76)||(18960997-18961062)
chr6 (11-76)||(28702888-28702953)
chr6 (11-78)||(19713678-19713745)
chr6 (11-76)||(20452658-20452723)
chr6 (11-76)||(22779140-22779205)
chr6 (11-77)||(20459459-20459525)
chr6 (11-76)||(19719836-19719901)
chr6 (11-79)||(14176921-14176988)
chr6 (11-77)||(17784071-17784137)
chr6 (23-76)||(26896467-26896520)
chr6 (11-72)||(10985075-10985136)
chr6 (11-76)||(19898950-19899015)
chr6 (38-77)||(24150083-24150122)
chr6 (38-76)||(19169106-19169144)
chr6 (38-76)||(24143593-24143631)
chr6 (11-76)||(15666265-15666330)
chr6 (40-77)||(20058867-20058904)
chr6 (33-76)||(1549203-1549246)
chr6 (38-77)||(8275503-8275542)
chr6 (37-76)||(27509373-27509412)
chr6 (37-76)||(27517310-27517349)
chr6 (26-76)||(615934-615984)
chr6 (26-76)||(623835-623885)
chr6 (38-76)||(16816884-16816922)
chr6 (38-76)||(16825639-16825677)
chr6 (38-76)||(18965560-18965598)
chr6 (26-76)||(22631694-22631744)
chr6 (32-77)||(20075522-20075567)
chr6 (45-77)||(16496411-16496443)
chr6 (40-76)||(20051004-20051040)
chr6 (44-76)||(21750688-21750720)
chr6 (32-76)||(22067326-22067370)
chr6 (32-76)||(34268771-34268815)
[»] chr5 (32 HSPs)
chr5 (11-77)||(36448248-36448314)
chr5 (11-76)||(20092753-20092818)
chr5 (11-77)||(23378301-23378367)
chr5 (11-76)||(20099650-20099715)
chr5 (11-76)||(20639863-20639928)
chr5 (11-74)||(26186649-26186712)
chr5 (11-77)||(15956982-15957048)
chr5 (11-76)||(25526188-25526253)
chr5 (11-76)||(25532868-25532933)
chr5 (11-76)||(36454627-36454692)
chr5 (11-76)||(40014876-40014941)
chr5 (11-76)||(37048344-37048409)
chr5 (11-78)||(25042281-25042348)
chr5 (33-76)||(29901229-29901272)
chr5 (38-76)||(21688153-21688191)
chr5 (38-76)||(21696072-21696110)
chr5 (38-76)||(26553293-26553331)
chr5 (38-77)||(7786437-7786476)
chr5 (38-77)||(17947983-17948022)
chr5 (38-76)||(7794288-7794326)
chr5 (26-76)||(11939629-11939679)
chr5 (38-76)||(12387279-12387317)
chr5 (38-76)||(12395972-12396010)
chr5 (38-76)||(15779771-15779809)
chr5 (38-76)||(15794006-15794044)
chr5 (38-76)||(17961874-17961912)
chr5 (38-76)||(23577467-23577505)
chr5 (38-76)||(31511206-31511244)
chr5 (38-76)||(31525330-31525368)
chr5 (26-78)||(18955112-18955164)
chr5 (45-77)||(21728986-21729018)
chr5 (32-76)||(25677884-25677928)
[»] chr4 (23 HSPs)
chr4 (11-77)||(20548380-20548446)
chr4 (11-76)||(19738009-19738074)
chr4 (11-76)||(20555005-20555070)
chr4 (11-77)||(50187782-50187848)
chr4 (11-76)||(3382445-3382510)
chr4 (26-76)||(22175853-22175903)
chr4 (23-77)||(39745433-39745487)
chr4 (30-76)||(3389212-3389258)
chr4 (33-77)||(55793251-55793295)
chr4 (38-76)||(13100670-13100708)
chr4 (38-76)||(15880072-15880110)
chr4 (11-77)||(25984368-25984434)
chr4 (32-77)||(10220457-10220502)
chr4 (11-76)||(14924997-14925062)
chr4 (23-76)||(39534175-39534228)
chr4 (32-80)||(3356382-3356430)
chr4 (38-78)||(12427134-12427174)
chr4 (38-77)||(41148978-41149017)
chr4 (26-76)||(15580497-15580547)
chr4 (38-76)||(16720803-16720841)
chr4 (38-76)||(16728826-16728864)
chr4 (32-76)||(3366052-3366096)
chr4 (29-77)||(47522601-47522649)
[»] chr1 (21 HSPs)
chr1 (11-77)||(20429352-20429418)
chr1 (11-76)||(19367475-19367540)
chr1 (11-76)||(35070035-35070100)
chr1 (11-76)||(1961638-1961703)
chr1 (11-76)||(18098375-18098440)
chr1 (11-76)||(22116351-22116416)
chr1 (26-76)||(2336072-2336122)
chr1 (11-65)||(1955829-1955883)
chr1 (11-77)||(44832556-44832622)
chr1 (33-77)||(16884517-16884561)
chr1 (11-77)||(47108372-47108438)
chr1 (38-77)||(22840176-22840215)
chr1 (38-77)||(20979998-20980037)
chr1 (38-77)||(25926806-25926845)
chr1 (26-77)||(39454380-39454431)
chr1 (38-76)||(5624229-5624267)
chr1 (38-76)||(5638368-5638406)
chr1 (38-76)||(22570921-22570959)
chr1 (32-77)||(2684983-2685028)
chr1 (11-76)||(13450035-13450100)
chr1 (32-76)||(22486277-22486321)
[»] scaffold0001 (1 HSPs)
scaffold0001 (11-76)||(96782-96847)
[»] chr8 (21 HSPs)
chr8 (11-76)||(14891862-14891927)
chr8 (11-77)||(15061336-15061402)
chr8 (11-77)||(22162987-22163053)
chr8 (11-76)||(20733160-20733225)
chr8 (11-79)||(25859275-25859343)
chr8 (11-76)||(22156978-22157043)
chr8 (11-77)||(32025654-32025720)
chr8 (11-76)||(20725198-20725263)
chr8 (11-76)||(20738096-20738161)
chr8 (26-78)||(24487931-24487983)
chr8 (12-76)||(25853031-25853095)
chr8 (11-77)||(31999762-31999828)
chr8 (40-77)||(45469473-45469510)
chr8 (38-78)||(23267954-23267994)
chr8 (38-77)||(15707137-15707176)
chr8 (38-77)||(18433029-18433068)
chr8 (26-76)||(6030848-6030898)
chr8 (26-76)||(12307687-12307737)
chr8 (14-76)||(32006734-32006795)
chr8 (32-76)||(12843948-12843992)
chr8 (32-76)||(16736729-16736773)
[»] chr7 (24 HSPs)
chr7 (11-76)||(34132822-34132887)
chr7 (11-77)||(22346866-22346932)
chr7 (11-78)||(34139134-34139201)
chr7 (11-76)||(18779065-18779130)
chr7 (11-74)||(43906101-43906164)
chr7 (11-77)||(1858567-1858633)
chr7 (11-77)||(28415149-28415215)
chr7 (11-76)||(13270887-13270952)
chr7 (12-76)||(6852014-6852078)
chr7 (38-76)||(15683152-15683190)
chr7 (38-76)||(42631286-42631324)
chr7 (36-76)||(36898425-36898465)
chr7 (38-77)||(9460444-9460483)
chr7 (33-76)||(15767129-15767172)
chr7 (38-76)||(4847170-4847208)
chr7 (38-76)||(6113642-6113680)
chr7 (38-76)||(9474235-9474273)
chr7 (26-76)||(23878710-23878760)
chr7 (38-76)||(34363168-34363206)
chr7 (32-77)||(809873-809918)
chr7 (32-77)||(3433023-3433068)
chr7 (32-76)||(3424692-3424736)
chr7 (32-76)||(4891369-4891413)
chr7 (32-76)||(37285967-37286011)
[»] scaffold0085 (1 HSPs)
scaffold0085 (11-79)||(7799-7867)
[»] scaffold1922 (1 HSPs)
scaffold1922 (11-77)||(216-282)
[»] scaffold0328 (1 HSPs)
scaffold0328 (11-77)||(177-243)
[»] scaffold0150 (1 HSPs)
scaffold0150 (11-77)||(38599-38665)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-77)||(14098-14164)
[»] scaffold0473 (1 HSPs)
scaffold0473 (11-76)||(9163-9228)
[»] scaffold0320 (1 HSPs)
scaffold0320 (11-76)||(6321-6386)
[»] scaffold0050 (2 HSPs)
scaffold0050 (11-76)||(27716-27781)
scaffold0050 (38-77)||(41292-41331)
[»] scaffold0028 (1 HSPs)
scaffold0028 (11-76)||(65838-65903)
[»] scaffold0253 (2 HSPs)
scaffold0253 (11-82)||(10333-10404)
scaffold0253 (11-82)||(19758-19829)
[»] scaffold0039 (1 HSPs)
scaffold0039 (11-74)||(89874-89937)
[»] scaffold0046 (1 HSPs)
scaffold0046 (11-77)||(86697-86763)
[»] scaffold0306 (1 HSPs)
scaffold0306 (14-76)||(15644-15706)
[»] scaffold0029 (3 HSPs)
scaffold0029 (26-76)||(38088-38138)
scaffold0029 (38-77)||(20211-20250)
scaffold0029 (38-76)||(33953-33991)
[»] scaffold0630 (1 HSPs)
scaffold0630 (11-67)||(1378-1434)
[»] scaffold0094 (2 HSPs)
scaffold0094 (11-76)||(30700-30765)
scaffold0094 (11-76)||(41665-41730)
[»] scaffold0101 (1 HSPs)
scaffold0101 (38-78)||(16565-16605)
[»] scaffold0605 (1 HSPs)
scaffold0605 (33-76)||(9360-9403)
[»] scaffold0441 (1 HSPs)
scaffold0441 (26-77)||(2470-2521)
[»] scaffold0378 (3 HSPs)
scaffold0378 (38-77)||(3335-3374)
scaffold0378 (38-77)||(15815-15854)
scaffold0378 (38-76)||(770-808)
[»] scaffold0755 (1 HSPs)
scaffold0755 (38-76)||(963-1001)
[»] scaffold0505 (1 HSPs)
scaffold0505 (26-76)||(11470-11520)
[»] scaffold0068 (2 HSPs)
scaffold0068 (38-76)||(17800-17838)
scaffold0068 (38-76)||(25719-25757)
[»] scaffold0431 (1 HSPs)
scaffold0431 (38-78)||(2801-2841)
[»] scaffold0152 (1 HSPs)
scaffold0152 (50-82)||(13457-13489)
[»] scaffold1888 (1 HSPs)
scaffold1888 (26-77)||(1065-1116)
[»] scaffold0458 (1 HSPs)
scaffold0458 (26-77)||(9287-9338)
[»] scaffold0182 (1 HSPs)
scaffold0182 (38-77)||(1714-1753)
[»] scaffold0104 (1 HSPs)
scaffold0104 (33-76)||(38561-38604)
[»] scaffold1719 (1 HSPs)
scaffold1719 (38-76)||(18-56)
[»] scaffold0503 (2 HSPs)
scaffold0503 (38-76)||(1944-1982)
scaffold0503 (38-76)||(6511-6549)
[»] scaffold0183 (1 HSPs)
scaffold0183 (33-76)||(20679-20724)
[»] scaffold0084 (1 HSPs)
scaffold0084 (50-80)||(39535-39565)
[»] scaffold0064 (1 HSPs)
scaffold0064 (38-76)||(9210-9248)
[»] scaffold0032 (1 HSPs)
scaffold0032 (38-76)||(29140-29178)
[»] scaffold0023 (1 HSPs)
scaffold0023 (23-76)||(150636-150689)
[»] scaffold0014 (1 HSPs)
scaffold0014 (43-76)||(3766-3799)
[»] scaffold1634 (1 HSPs)
scaffold1634 (38-78)||(995-1035)
[»] scaffold0435 (1 HSPs)
scaffold0435 (32-76)||(8394-8438)
[»] scaffold0098 (1 HSPs)
scaffold0098 (32-76)||(27003-27047)


Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 86 - 321
Target Start/End: Original strand, 31378864 - 31379099
Alignment:
Q  86 aatcttctatacactttacatgaaacttgacaaatatttagaaaatagtttaaaagtgaaagatacagtatgaaaatccaaactctagactccttgtgat 185  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31378864 aatcgtctataaactttacatgaaacttgacaaatatttagaaaatagttgaaaagtgaaagatacaatatgaaaatccaaactctagactccttgtgat 31378963  T
Q  186 ccagcttcgacctgacttattgaacaactattgagtacttgtaactcacattccttcaatgtgtattgatccctgaaaaagaaacaataaaatgggaaaa 285  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31378964 ccagcttcgacctgacttattgaacaactattgagtacttgtacctcacattccttcaatgtgtattgatacctgaaaaagaaacaataaaatgggaaaa 31379063  T
Q  286 gatatactatctcagtgagttttcgaatgaagataa 321  Q
    |||||||||||||||||| ||||||||| |||||||    
T  31379064 gatatactatctcagtgaattttcgaataaagataa 31379099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 20279332 - 20279398
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20279332 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 20279398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 11873747 - 11873679
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaact 79  Q
    ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  11873747 cagagatcgatcagagtcaagtgacatgtgtcagtggggtcttaggtcaaaaattggggtatgacaact 11873679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 38084468 - 38084534
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38084468 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 38084534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 18289 - 18354
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  18289 cagagatcgatcagagtcaagtgacatgtctcagtggggccttaggtcaaaaattggggtatgaca 18354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 18500291 - 18500226
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  18500291 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttagatcaaaaattggggtatgaca 18500226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 36735398 - 36735332
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||| ||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36735398 cagagatggatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 36735332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 5874252 - 5874318
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||| ||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  5874252 cagagatcgatcagagtcgagtgacatgtgtcagtggacccttaggtcaaaaattggggtatgacaa 5874318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 5871111 - 5871176
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||| ||||| | ||||||||||| |||||||||||||||||||||||||||    
T  5871111 cagagatcgatcagagtcgagtgatatgtgtcagtgggcccttaggtcaaaaattggggtatgaca 5871176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 22518985 - 22519028
Alignment:
Q  33 gacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||| ||||||||||| |||||||||||||||||||||||||||    
T  22518985 gacacgtgtcagtgggaccttaggtcaaaaattggggtatgaca 22519028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 29586139 - 29586096
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggcctta 54  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  29586139 cagagatcgatcagagtcaagtgacatgtgtcagtggggcctta 29586096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 12370466 - 12370520
Alignment:
Q  23 agagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||||||| ||||| |||||||||||  ||| |||||||||||||||||||||||    
T  12370466 agagtcaaatgacacgtgtcagtgggatcttgggtcaaaaattggggtatgacaa 12370520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 13038973 - 13039012
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  13038973 gtgtcaatggggtcttaggtcaaaaattggggtatgacaa 13039012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 39649704 - 39649665
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  39649704 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 39649665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 21064736 - 21064686
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| ||||| | ||||||||| |||||||| ||||||||||||||||||    
T  21064736 gtcaaatgacatgcgtcagtgggaccttaggtaaaaaattggggtatgaca 21064686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 44299997 - 44299959
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  44299997 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 44299959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 45499002 - 45499040
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  45499002 gtgtcagtggggtcttaggtcaaaaattggagtatgaca 45499040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 25036877 - 25036922
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||| ||||| ||| | ||||||||||||||||||||||||||||    
T  25036877 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgacaa 25036922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 25040984 - 25041029
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||| ||||| ||| | ||||||||||||||||||||||||||||    
T  25040984 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgacaa 25041029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 16031259 - 16031327
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaact 79  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16031259 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaact 16031327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 13111787 - 13111852
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13111787 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 13111852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 14893146 - 14893211
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14893146 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 14893211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 21638561 - 21638626
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21638561 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 21638626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 4313596 - 4313660
Alignment:
Q  12 agagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4313596 agagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 4313660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 261426 - 261364
Alignment:
Q  14 agatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  261426 agatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 261364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 14888041 - 14888107
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  14888041 cagagatcgatcagagtcaagtgacatgtgtcagtggagccttaggtcaaaaattggggtatgacaa 14888107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 13105639 - 13105704
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  13105639 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattagggtatgaca 13105704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 14881315 - 14881380
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  14881315 cagagatcgatcagagtcaagtgacatgtgtcggtggggccttaggtcaaaaattggggtatgaca 14881380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 23288122 - 23288187
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  23288122 cagagatcgatcagagtcaagtgacatgtgtaagtggggccttaggtcaaaaattggggtatgaca 23288187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 11180825 - 11180760
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  11180825 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggttaaaaattggggtatgaca 11180760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 48060734 - 48060795
Alignment:
Q  15 gatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  48060734 gatcgatcagagtcaagtgacatgtgtcagtgaggccttaggtcaaaaattggggtatgaca 48060795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 68207 - 68145
Alignment:
Q  14 agatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||| |||||||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  68207 agatcgatcagagtcaagtgacatgtgccagtggggcgttaggtcaaaaattggggtatgaca 68145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 74300 - 74238
Alignment:
Q  14 agatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||| |||||||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  74300 agatcgatcagagtcaagtgacatgtgccagtggggcgttaggtcaaaaattggggtatgaca 74238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 3404817 - 3404752
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||| | ||||| |||||||||||||||||||| ||||||||||||||||||    
T  3404817 cagagatcgattagagtcgaatgacatgtgtcagtggggccttaggtaaaaaattggggtatgaca 3404752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 30102452 - 30102517
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| || |||||||||||||| ||||||||||||| |||||||    
T  30102452 cagagatcgatcagagtcaagtgacatgtatcagtggggccttaagtcaaaaattgggatatgaca 30102517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 12550476 - 12550412
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgac 75  Q
    |||||||||||  ||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  12550476 cagagatcgatcggagtcgagtgacatgtgtcactggggccttaggtcaaaaattggggtatgac 12550412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 49967413 - 49967354
Alignment:
Q  17 tcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| || ||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  49967413 tcgatcagggtcaagtgacacgtgtcagtggggccttaggtcaaaaattagggtatgaca 49967354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 8606227 - 8606161
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||| ||||||| || ||||||||  |||||||||||||||||||||||||||    
T  8606227 cagagatcgattagagtcgagtgacatgtttcagtgggctcttaggtcaaaaattggggtatgacaa 8606161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 8612687 - 8612622
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||| ||||||| || ||||||||  ||||||||||||||||||||||||||    
T  8612687 cagagatcgatcagagtcgagtgacatgtctcagtgggctcttaggtcaaaaattggggtatgaca 8612622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 37470189 - 37470141
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatga 74  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  37470189 gtcaagtgacacgtgttagtggggccttaggtcaaaaattggggtatga 37470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 18706310 - 18706267
Alignment:
Q  33 gacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||| ||||||||||| |||||||||||||||||||||||||||    
T  18706310 gacacgtgtcagtgggaccttaggtcaaaaattggggtatgaca 18706267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 13086604 - 13086554
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| ||||| |||| |||||| |||||||||||||||||||||||||||    
T  13086604 gtcaaatgacatgtgttagtgggaccttaggtcaaaaattggggtatgaca 13086554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 13509414 - 13509479
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||| ||||  | ||||||||| ||||||||||||| || ||||||||||    
T  13509414 cagagatcgatcagagtcaaatgacgcgcgtcagtgggaccttaggtcaaaatttagggtatgaca 13509479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 15610489 - 15610554
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||| ||| || || ||| |||| | ||||||||| |||||||||||||||||||||||||||    
T  15610489 cagagattgattagggttaagcgacacgcgtcagtgggaccttaggtcaaaaattggggtatgaca 15610554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 33814598 - 33814635
Alignment:
Q  41 tcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    |||||||| |||||||||||||||||||||||||||||    
T  33814598 tcagtgggaccttaggtcaaaaattggggtatgacaac 33814635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 11630010 - 11630050
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  11630010 gtgtcagtgggaccttaggtcaaaatttggggtatgacaac 11630050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 43097604 - 43097556
Alignment:
Q  33 gacaagtgtcagtggggccttaggtcaaaaattggggtatgacaacttt 81  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||| ||||    
T  43097604 gacacgtgtcagtgggaccttaagtcaaaaattggggtatgacaccttt 43097556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 15537759 - 15537798
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  15537759 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 15537798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 21607490 - 21607451
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  21607490 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 21607451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 46371210 - 46371171
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  46371210 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 46371171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 5651851 - 5651889
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  5651851 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 5651889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 8804241 - 8804203
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  8804241 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 8804203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 8812641 - 8812603
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  8812641 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 8812603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 15529069 - 15529107
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  15529069 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 15529107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 20604005 - 20604055
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||  ||| |||||||| |||||||||||||    
T  20604005 gtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 20604055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 30068681 - 30068743
Alignment:
Q  14 agatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||| |||||||||||||  |  |||||||| ||||||||||||| || ||||||||||    
T  30068681 agatcgatcagagtcaagtgacgcgcatcagtgggaccttaggtcaaaatttagggtatgaca 30068743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 37256110 - 37256160
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||  ||| |||||||| |||||||||||||    
T  37256110 gtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 37256160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 37265946 - 37265996
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||  ||| |||||||| |||||||||||||    
T  37265946 gtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 37265996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 46385337 - 46385299
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  46385337 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 46385299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 15579439 - 15579504
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||| ||| || || ||| |||| | ||||||||| |||||||||||||| ||||||||||||    
T  15579439 cagagattgattagggttaagcgacacgcgtcagtgggaccttaggtcaaaaactggggtatgaca 15579504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 79
Target Start/End: Complemental strand, 19833471 - 19833442
Alignment:
Q  50 ccttaggtcaaaaattggggtatgacaact 79  Q
    ||||||||||||||||||||||||||||||    
T  19833471 ccttaggtcaaaaattggggtatgacaact 19833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 3675522 - 3675478
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  3675522 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 3675478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 3683913 - 3683869
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  3683913 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 3683869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 11325852 - 11325884
Alignment:
Q  45 tggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||| ||||||||||||||||||||||||||||    
T  11325852 tgggaccttaggtcaaaaattggggtatgacaa 11325884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 7641 - 7707
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7641 cagagatcgatcagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattagggtatgacaa 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 22111 - 22045
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22111 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 22045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 8045 - 7979
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8045 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 7979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 23648 - 23582
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23648 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 23582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 405 - 457
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    ||||||||||| |||||||||||  ||| |||||||| |||||||||||||||    
T  405 gtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgacaac 457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 12667538 - 12667604
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12667538 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 12667604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 18960997 - 18961062
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18960997 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 18961062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 28702888 - 28702953
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28702888 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 28702953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 19713745 - 19713678
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19713745 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaac 19713678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 20452658 - 20452723
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  20452658 cagagatcgatcagagtcaagtgacatgtgtcagtggagccttaggtcaaaaattggggtatgaca 20452723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 22779140 - 22779205
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  22779140 cagagatcgatcagagtcaagtgacacgtgtcagtggggcattaggtcaaaaattggggtatgaca 22779205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 20459459 - 20459525
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||||||| || |||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  20459459 cagagatcaatcagagtcaagtgacatgtgtcactggggccttaggtcaaaaattggggtatgacaa 20459525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 19719901 - 19719836
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||| || |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  19719901 cagagatcaatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 19719836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 14176988 - 14176921
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaact 79  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  14176988 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaatt-gggtatgacaact 14176921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 17784071 - 17784137
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  17784071 cagagatcgatcagagtcgagtgacatgtgtcagtggagccttaggtcaaaaattggtgtatgacaa 17784137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 26896520 - 26896467
Alignment:
Q  23 agagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  26896520 agagttaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 26896467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 10985075 - 10985136
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtat 72  Q
    ||||||| ||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  10985075 cagagatggatcagagtcaagtgacatgtgttagtggggtcttaggtcaaaaattggggtat 10985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 19899015 - 19898950
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||| || |||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  19899015 cagagatcaatcagagtcgagtgacatgtgccagtggggccttaggtcaaaaatttgggtatgaca 19898950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 24150083 - 24150122
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  24150083 gtgtcagtgggaccttaggtcaaaaattggggtatgacaa 24150122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 19169144 - 19169106
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  19169144 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 19169106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 24143593 - 24143631
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  24143593 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 24143631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 15666265 - 15666330
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||| ||| || || ||| |||| |||| |||||| |||||||||||||||||||||||||||    
T  15666265 cagagattgatcagggttaagcgacacgtgttagtgggcccttaggtcaaaaattggggtatgaca 15666330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 20058867 - 20058904
Alignment:
Q  40 gtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  20058867 gtcagtgggaccttaggtcaaaaattggggtatgacaa 20058904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 1549246 - 1549203
Alignment:
Q  33 gacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||| |||| |||||| |||||||||||||||||||||||||||    
T  1549246 gacacgtgttagtgggaccttaggtcaaaaattggggtatgaca 1549203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 8275542 - 8275503
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  8275542 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 8275503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 27509412 - 27509373
Alignment:
Q  37 agtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  27509412 agtgtcagtgggaccttaggtcaaaatttggggtatgaca 27509373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 27517349 - 27517310
Alignment:
Q  37 agtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  27517349 agtgtcagtgggaccttaggtcaaaatttggggtatgaca 27517310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 615934 - 615984
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||  ||| |||||||| |||||||||||||    
T  615934 gtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 615984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 623835 - 623885
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||  ||| |||||||| |||||||||||||    
T  623835 gtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 623885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 16816884 - 16816922
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  16816884 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 16816922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 16825639 - 16825677
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  16825639 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 16825677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 18965560 - 18965598
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  18965560 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 18965598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 22631744 - 22631694
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| ||||| | ||||||| | |||||||||||||||||||||||||||    
T  22631744 gtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgaca 22631694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 20075522 - 20075567
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||| |||||||||  | |||||||||||||||||||||||||||    
T  20075522 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacaa 20075567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 16496443 - 16496411
Alignment:
Q  45 tggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||| ||||||||||||||||||||||||||||    
T  16496443 tgggaccttaggtcaaaaattggggtatgacaa 16496411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 20051004 - 20051040
Alignment:
Q  40 gtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||  ||||||||||||||||||||||||||    
T  20051004 gtcagtgggaacttaggtcaaaaattggggtatgaca 20051040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 21750688 - 21750720
Alignment:
Q  44 gtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||| ||||||||||||||||||||||||||    
T  21750688 gtggggtcttaggtcaaaaattggggtatgaca 21750720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 22067326 - 22067370
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  22067326 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 22067370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 34268815 - 34268771
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  34268815 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 34268771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 36448314 - 36448248
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36448314 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 36448248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 20092753 - 20092818
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20092753 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20092818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 23378301 - 23378367
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  23378301 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgaggtatgacaa 23378367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 20099650 - 20099715
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  20099650 cagagatcgatcagagtcaagtgacatgtgttagtggggccttaggtcaaaaattggggtatgaca 20099715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 20639863 - 20639928
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  20639863 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20639928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 26186649 - 26186712
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatga 74  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  26186649 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatga 26186712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 15956982 - 15957048
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  15956982 cagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaa 15957048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 25526253 - 25526188
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  25526253 cagagatcgatcagattcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 25526188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 25532933 - 25532868
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  25532933 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 25532868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 36454692 - 36454627
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  36454692 cagagatcgatcagagtcaagtgacatgtgtccgtgaggccttaggtcaaaaattggggtatgaca 36454627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 40014941 - 40014876
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  40014941 cagagatcgatcagagtcaagtgacatgtgtcagtgggaccttaagtcaaaaattggggtatgaca 40014876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 37048409 - 37048344
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||  ||||||||||||||| ||||||||||    
T  37048409 cagagatcgatcagagtcaagtgacacgtgtcagtgggatcttaggtcaaaaatttgggtatgaca 37048344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 25042281 - 25042348
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    ||||||||||  |||||||||||||| || ||||||| ||||||||||||||||| |||||| |||||    
T  25042281 cagagatcgaacagagtcaagtgacacgtatcagtggagccttaggtcaaaaatttgggtataacaac 25042348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 29901272 - 29901229
Alignment:
Q  33 gacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||| |||||||||||||||||||||||||||    
T  29901272 gacaactgtcagtgggaccttaggtcaaaaattggggtatgaca 29901229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 21688191 - 21688153
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  21688191 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 21688153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 21696110 - 21696072
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  21696110 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 21696072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 26553293 - 26553331
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  26553293 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 26553331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 7786476 - 7786437
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  7786476 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 7786437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 17948022 - 17947983
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  17948022 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 17947983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 7794326 - 7794288
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  7794326 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 7794288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 11939629 - 11939679
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||  ||| |||||||| |||||||||||||    
T  11939629 gtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 11939679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 12387279 - 12387317
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  12387279 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 12387317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 12395972 - 12396010
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  12395972 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 12396010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 15779771 - 15779809
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  15779771 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 15779809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 15794006 - 15794044
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  15794006 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 15794044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 17961912 - 17961874
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  17961912 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 17961874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 23577467 - 23577505
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  23577467 gtgtcaatgggaccttaggtcaaaaattggggtatgaca 23577505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 31511244 - 31511206
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  31511244 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 31511206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 31525368 - 31525330
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  31525368 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 31525330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 18955164 - 18955112
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    |||| |||||| ||||||||| |  ||| ||||||||||||||||||||||||    
T  18955164 gtcaggtgacacgtgtcagtgagatcttgggtcaaaaattggggtatgacaac 18955112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 21728986 - 21729018
Alignment:
Q  45 tggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||| ||||||||||||||||||||||||||||    
T  21728986 tgggaccttaggtcaaaaattggggtatgacaa 21729018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 25677884 - 25677928
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| ||||| ||| | |||||||||||||||||||||||||||    
T  25677884 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 25677928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 20548446 - 20548380
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20548446 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 20548380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 19738009 - 19738074
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19738009 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 19738074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 20555070 - 20555005
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20555070 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20555005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 50187848 - 50187782
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50187848 cagagattgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 50187782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 3382445 - 3382510
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||  |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  3382445 cagagatcgagcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 3382510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 22175853 - 22175903
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22175853 gtcaagtgacacgtgtcagtggggccttaggtcaaaaattggggtatgaca 22175903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 39745433 - 39745487
Alignment:
Q  23 agagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39745433 agagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 39745487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 3389212 - 3389258
Alignment:
Q  30 agtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  3389212 agtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 3389258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 55793251 - 55793295
Alignment:
Q  33 gacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  55793251 gacaagtgtcagtgggaccttaggtcaaaaattggggtatgacaa 55793295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 13100708 - 13100670
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  13100708 gtgtcagtggggccttaggtcaaaatttggggtatgaca 13100670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 15880072 - 15880110
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  15880072 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 15880110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 25984434 - 25984368
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||||||| || || |||||  |||| ||||||||||| |||||||| |||||||||||||||||||    
T  25984434 cagagatcaatcagcgtcaaacgacacgtgtcagtgggaccttaggttaaaaattggggtatgacaa 25984368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 10220457 - 10220502
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||    
T  10220457 tgacacgtgtcagtgctgccttaggtcaaaaattggggtatgacaa 10220502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 14925062 - 14924997
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||| ||| || || ||| |||| ||||||||||| |||||||| ||||||||||||||||||    
T  14925062 cagagattgatcagggttaagcgacacgtgtcagtgggaccttaggtaaaaaattggggtatgaca 14924997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 39534228 - 39534175
Alignment:
Q  23 agagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||| ||||| |||||||||||  ||| ||||||||||||||||||||||    
T  39534228 agagtcaaatgacacgtgtcagtgggatcttgggtcaaaaattggggtatgaca 39534175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 3356430 - 3356382
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaactt 80  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||||||    
T  3356430 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacaactt 3356382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 12427174 - 12427134
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  12427174 gtgtcagtgggaccttaggtcaaaatttggggtatgacaac 12427134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 41149017 - 41148978
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  41149017 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 41148978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 15580497 - 15580547
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| ||||| | |||||||||  ||||||||||||||||||||||||||    
T  15580497 gtcaaatgacatgcgtcagtgggatcttaggtcaaaaattggggtatgaca 15580547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 16720803 - 16720841
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  16720803 gtgtcagtcgggtcttaggtcaaaaattggggtatgaca 16720841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 16728826 - 16728864
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  16728826 gtgtcagtggggtcttaggtaaaaaattggggtatgaca 16728864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 3366096 - 3366052
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  3366096 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 3366052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 47522601 - 47522649
Alignment:
Q  29 aagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||| ||| |||||| ||||||||||||||||| | ||||||||    
T  47522601 aagtgacaaatgttagtgggaccttaggtcaaaaattgagatatgacaa 47522649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 20429418 - 20429352
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20429418 cagagatcgatcagagtcaagtgacaagtgtcagtgggaccttaggtcaaaaattggggtatgacaa 20429352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 19367540 - 19367475
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19367540 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 19367475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 35070100 - 35070035
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35070100 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 35070035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 1961703 - 1961638
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  1961703 cagagatcgatcagagtcaagtgttatgtgtcagtggggccttaggtcaaaaattggggtatgaca 1961638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 18098440 - 18098375
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  18098440 cagagatcgatcagagtcaagtgacatgtgttagtggggccttaggttaaaaattggggtatgaca 18098375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 22116351 - 22116416
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  22116351 cagagatcgatcagagttgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 22116416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 2336072 - 2336122
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2336072 gtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 2336122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 1955883 - 1955829
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaatt 65  Q
    ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  1955883 cagagatcgatcagagtcaagtgatacgtgtcagtggggccttaggtcaaaaatt 1955829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 44832556 - 44832622
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| |||||||||  ||||||||| |||||||||| ||||||||    
T  44832556 cagagatcgatcagagtcaagtgacatgtgtcagtgaagccttaggttaaaaattgggatatgacaa 44832622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 16884561 - 16884517
Alignment:
Q  33 gacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  16884561 gacacgtgtcagtggggccttaggtcaaaaattggggtatgacaa 16884517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 47108438 - 47108372
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| |||| |||||| |||||||| ||||||| || ||||||||    
T  47108438 cagagatcgatcagagtcaagtgacatgtgtaagtgggaccttaggttaaaaattaggatatgacaa 47108372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 22840176 - 22840215
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  22840176 gtgtcagtgggaccttaggtcaaaaattggggtatgacaa 22840215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 20979998 - 20980037
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  20979998 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 20980037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 25926806 - 25926845
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  25926806 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 25926845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 39454431 - 39454380
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||| ||||| | ||||||| | ||||||||||||||||||||||||||||    
T  39454431 gtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgacaa 39454380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 5624229 - 5624267
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  5624229 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 5624267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 5638368 - 5638406
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  5638368 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 5638406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 22570921 - 22570959
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  22570921 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 22570959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 2685028 - 2684983
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||| |||||||||  | |||||||||||||||||||||||||||    
T  2685028 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacaa 2684983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 13450100 - 13450035
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||||  ||||||| ||||  | ||||||||| ||||||||||||| || ||||||||||    
T  13450100 cagagatcgatccgagtcaaatgacgcgcgtcagtgggaccttaggtcaaaatttagggtatgaca 13450035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 22486277 - 22486321
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  22486277 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 22486321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 96847 - 96782
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  96847 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 96782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 14891862 - 14891927
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14891862 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 14891927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 15061336 - 15061402
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15061336 cagagatcgatcagagttaagtgacacgtgtcagtggggccttaggtcaaaaattggggtatgacaa 15061402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 22162987 - 22163053
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  22162987 cagagatcgatcagagtcaagtgacatgtgtcagtgggcccttaggtcaaaaattggggtatgacaa 22163053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 20733225 - 20733160
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  20733225 cagagatcgatcagagtcaagtgacacgtgtcaatggggccttaggtcaaaaattggggtatgaca 20733160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 25859275 - 25859343
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaact 79  Q
    ||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  25859275 cagagatcgatcagagtcgagtgacatgtgacagtggggccttaggtcaaaaattggggtatgacaact 25859343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 22156978 - 22157043
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  22156978 cagagatcgatcagagtcaagtgacatgtgttagtgggcccttaggtcaaaaattggggtatgaca 22157043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 32025654 - 32025720
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||| || ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  32025654 cagagatcgatcagaatcgagtgacatgtgtcagtggggtcttaggtcaaaaattggggtatgacaa 32025720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 20725263 - 20725198
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||| ||| ||||||||||| ||||||| ||||||||||    
T  20725263 cagagatcgatcagagtcaagtgacacgtgttagtcgggccttaggtaaaaaatttgggtatgaca 20725198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 20738161 - 20738096
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||| ||| ||||||||||| ||||||| ||||||||||    
T  20738161 cagagatcgatcagagtcaagtgacacgtgttagtcgggccttaggtaaaaaatttgggtatgaca 20738096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 24487931 - 24487983
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    ||||| ||||| | ||||||||| |||||||||||||||||||||||||||||    
T  24487931 gtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggggtatgacaac 24487983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 25853031 - 25853095
Alignment:
Q  12 agagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||| |||||| ||||||| |||||||||||||| ||||  |||||||| |||||||||    
T  25853031 agagatcgatcagagtcgagtgacatgtgtcagtggggccgtaggcaaaaaattgaggtatgaca 25853095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 31999828 - 31999762
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||| ||| ||| ||||||  |||  |||||||||||||||||||||||||||    
T  31999828 cagagatcgatcagagtcgagttacatgtgtcaacgggatcttaggtcaaaaattggggtatgacaa 31999762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 45469510 - 45469473
Alignment:
Q  40 gtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  45469510 gtcagtgaggccttaggtcaaaaattggggtatgacaa 45469473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 23267954 - 23267994
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  23267954 gtgtcagtgggaccttaggtcaaaatttggggtatgacaac 23267994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 15707176 - 15707137
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  15707176 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 15707137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 18433068 - 18433029
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  18433068 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 18433029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 6030898 - 6030848
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| ||||| | ||||||||| |||||||||||||||||||||| ||||    
T  6030898 gtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggggtaagaca 6030848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 12307687 - 12307737
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||  ||| |||||||| |||||||||||||    
T  12307687 gtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 12307737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 32006795 - 32006734
Alignment:
Q  14 agatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||| |||||| ||||| | ||||||| ||| | |||||||||||||||||||||||||    
T  32006795 agatcgatcagagtcgagtgatatgtgtcagcgggtc-ttaggtcaaaaattggggtatgaca 32006734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 12843992 - 12843948
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  12843992 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 12843948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 16736773 - 16736729
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  16736773 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 16736729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 34132822 - 34132887
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34132822 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 34132887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 22346932 - 22346866
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  22346932 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggacaaaaattggggtatgacaa 22346866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 34139134 - 34139201
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  34139134 cagagatcgatcagagtcaagtgacatgtgtcagtggagccttagatcaaaaattggggtatgacaac 34139201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 18779065 - 18779130
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  18779065 cagagatcgattagagtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgaca 18779130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 43906164 - 43906101
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatga 74  Q
    ||||||||||| ||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  43906164 cagagatcgatcaggatcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatga 43906101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 1858567 - 1858633
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||| ||| | |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1858567 cagagattgatcatagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 1858633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 28415215 - 28415149
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  28415215 cagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtaaaaaattggggtatgacaa 28415149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 13270887 - 13270952
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  13270887 cagagatcgatcagactcgagtgacatgtgtcagtggggccttaggtcaaaaattggaatatgaca 13270952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 6852014 - 6852078
Alignment:
Q  12 agagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||| |||||| || | || ||||||||||| |||||||| ||||||||||||||||||    
T  6852014 agagatcgatcagagtcgagcggcatgtgtcagtgggaccttaggttaaaaattggggtatgaca 6852078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 15683190 - 15683152
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  15683190 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 15683152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 42631286 - 42631324
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  42631286 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 42631324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 36898465 - 36898425
Alignment:
Q  36 aagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  36898465 aagtgtcagtgggaccttaagtcaaaaattggggtatgaca 36898425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 9460483 - 9460444
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  9460483 gtgtcagtggagccttaggtcaaaatttggggtatgacaa 9460444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 15767129 - 15767172
Alignment:
Q  33 gacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||| |||| |||||| |||||||||||||||||||||||||||    
T  15767129 gacacgtgttagtgggaccttaggtcaaaaattggggtatgaca 15767172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 4847208 - 4847170
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  4847208 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 4847170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 6113680 - 6113642
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  6113680 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 6113642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 9474273 - 9474235
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  9474273 gtgtcagtggagccttaggtcaaaatttggggtatgaca 9474235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 23878710 - 23878760
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||  ||| |||||||| |||||||||||||    
T  23878710 gtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 23878760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 34363168 - 34363206
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  34363168 gtgtcagtggggtcttgggtcaaaaattggggtatgaca 34363206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 809873 - 809918
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||| |||||||||  | |||||||||||||||||||||||||||    
T  809873 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacaa 809918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 3433023 - 3433068
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||| |||||||||  | |||||||||||||||||||||||||||    
T  3433023 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgacaa 3433068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 3424692 - 3424736
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  3424692 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 3424736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 4891369 - 4891413
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  4891369 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 4891413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 37286011 - 37285967
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  37286011 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 37285967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 7799 - 7867
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaact 79  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7799 cagagatcgatcagagtcaagtgacatgtgttagtggggccttaggtcaaaaattggggtatgacaact 7867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1922 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1922
Description:

Target: scaffold1922; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 216 - 282
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  216 cagagatcgatcagagtcaagtgacatgtgtcagtggggcattaggtcaaaaattggggtatgacaa 282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 177 - 243
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  177 cagagatcgatcagagtcgagtgacaagtgtcagtgaggccttaggtcaaaaattggggtatgacaa 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 38599 - 38665
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38599 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 38665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 14164 - 14098
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  14164 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgaggtatgacaa 14098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 9163 - 9228
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  9163 cagagatcgatcagagtcaagtgacatgtgtcagtgaggccttaggtcaaaaattggggtatgaca 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 6321 - 6386
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  6321 cagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggacaaaaattggggtatgaca 6386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 27716 - 27781
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  27716 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 27781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 41292 - 41331
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  41292 gtgtcagtgggatcttaggtcaaaaattggggtatgacaa 41331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 65903 - 65838
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  65903 cagagatcgatcagagtcaagtgacatgtgtgagtggggccttaggtcaaaaattggggtatgaca 65838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 10404 - 10333
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaactttt 82  Q
    ||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  10404 cagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgacacctttt 10333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 19829 - 19758
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaactttt 82  Q
    ||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  19829 cagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgacacctttt 19758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 89874 - 89937
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatga 74  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  89874 cagagatcgataagagtcaagtgacatatgtcagtggggccttaggtcaaaaattggggtatga 89937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 86697 - 86763
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||||||||    
T  86697 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattagggtatgacaa 86763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 15706 - 15644
Alignment:
Q  14 agatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||||| |||||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  15706 agatcgatcagagtcaagtgacatgtgtcagtggggccttagaacaaaaattggggtatgaca 15644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 38088 - 38138
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38088 gtcaagtgacacgtgtcagtggggccttaggtcaaaaattggggtatgaca 38138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 20250 - 20211
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  20250 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 20211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 33991 - 33953
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  33991 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 33953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 1378 - 1434
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattgg 67  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  1378 cagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattgg 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 30700 - 30765
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||| ||| || || ||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  30700 cagagattgattagggttaagcgacacgtgtcagtgggaccttaggtcaaaaattggggtatgaca 30765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 41665 - 41730
Alignment:
Q  11 cagagatcgatgagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||| ||| || || ||| |||| |||| |||||| |||||||||||||||||||||||||||    
T  41665 cagagattgattagggttaagcgacacgtgttagtgggaccttaggtcaaaaattggggtatgaca 41730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 16565 - 16605
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  16565 gtgtcagtgggaccttaggtcaaaaattggggtatgacaac 16605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 9360 - 9403
Alignment:
Q  33 gacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  9360 gacaagtgtcagtgggaacttaggtcaaaaattggggtatgaca 9403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 2521 - 2470
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||| ||||| | ||||||||| ||||||||||||||||||||||||||||    
T  2521 gtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggggtatgacaa 2470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 3374 - 3335
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  3374 gtgtcagtgggaccttaggtcaaaaattggggtatgacaa 3335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 15854 - 15815
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  15854 gtgtcagtgggaccttaggtcaaaaattggggtatgacaa 15815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 808 - 770
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  808 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0755 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0755
Description:

Target: scaffold0755; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 1001 - 963
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  1001 gtgtcagtggggccttaggtcaaaatttggggtatgaca 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 11520 - 11470
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| ||||| |||| |||||| |||||||||||||||||||||||||||    
T  11520 gtcaaatgacatgtgttagtgggtccttaggtcaaaaattggggtatgaca 11470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 17800 - 17838
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  17800 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 17838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 25719 - 25757
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  25719 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 25757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 2801 - 2841
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  2801 gtgtcagtgggaccttaggtcaaaatttggggtatgacaac 2841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 13489 - 13457
Alignment:
Q  50 ccttaggtcaaaaattggggtatgacaactttt 82  Q
    |||||||||||||||||||||||||||||||||    
T  13489 ccttaggtcaaaaattggggtatgacaactttt 13457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1888 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1888
Description:

Target: scaffold1888; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 1065 - 1116
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||| |||||  ||| |||||||||||||||||||||||    
T  1065 gtcaagtgacacgtgtcggtgggatcttgggtcaaaaattggggtatgacaa 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 9287 - 9338
Alignment:
Q  26 gtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||| ||||| | ||||||| | ||||||||||||||||||||||||||||    
T  9287 gtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgacaa 9338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 1753 - 1714
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaa 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  1753 gtgtcagtgggaccttaggtcaaaatttggggtatgacaa 1714  T

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Target: scaffold0104 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 38561 - 38604
Alignment:
Q  33 gacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||    
T  38561 gacaattgtcagtgggaccttaggtcaaaaattcgggtatgaca 38604  T

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Target: scaffold1719 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1719
Description:

Target: scaffold1719; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 18 - 56
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  18 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 56  T

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Target: scaffold0503 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 1944 - 1982
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  1944 gtgtcagtgagaccttaggtcaaaaattggggtatgaca 1982  T

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Target: scaffold0503; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 6511 - 6549
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  6511 gtgtcagtgagaccttaggtcaaaaattggggtatgaca 6549  T

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Target: scaffold0183 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 20724 - 20679
Alignment:
Q  33 gacaagtgtcagtgggg--ccttaggtcaaaaattggggtatgaca 76  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||    
T  20724 gacaagtgtcagtgtgggaccttaggtcaaaaattggggtatgaca 20679  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Original strand, 39535 - 39565
Alignment:
Q  50 ccttaggtcaaaaattggggtatgacaactt 80  Q
    |||||||||||||||||||||||||||||||    
T  39535 ccttaggtcaaaaattggggtatgacaactt 39565  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 9210 - 9248
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  9210 gtgtcagtgggaccttaggtcaaaatttggggtatgaca 9248  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 29140 - 29178
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  29140 gtgtcagtgggaccttaggtcaaaaattggagtatgaca 29178  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 150636 - 150689
Alignment:
Q  23 agagtcaagtgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| || ||||| |||||||||  | ||||||||||||||||||||||||||    
T  150636 agagttaaatgacatgtgtcagtgttgtcttaggtcaaaaattggggtatgaca 150689  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 3799 - 3766
Alignment:
Q  43 agtggggccttaggtcaaaaattggggtatgaca 76  Q
    |||||| |||||||||||||||||||||||||||    
T  3799 agtgggcccttaggtcaaaaattggggtatgaca 3766  T

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Target: scaffold1634 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1634
Description:

Target: scaffold1634; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 1035 - 995
Alignment:
Q  38 gtgtcagtggggccttaggtcaaaaattggggtatgacaac 78  Q
    |||||||||||  |||||||||||| |||||||||||||||    
T  1035 gtgtcagtgggatcttaggtcaaaatttggggtatgacaac 995  T

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Target: scaffold0435 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 8394 - 8438
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| ||||| ||| | |||||||||||||||||||||||||||    
T  8394 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 8438  T

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Target: scaffold0098 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 27047 - 27003
Alignment:
Q  32 tgacaagtgtcagtggggccttaggtcaaaaattggggtatgaca 76  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  27047 tgacacgtgtcagtgctgtcttaggtcaaaaattggggtatgaca 27003  T

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