View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12515_low_30 (Length: 301)
Name: NF12515_low_30
Description: NF12515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12515_low_30 |
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Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 2 - 263
Target Start/End: Original strand, 34680730 - 34680990
Alignment:
| Q |
2 |
taaaacagccaccatcatgaccaactatttggttggagtattttgatgttgaatggaaaactataaagtcttgtatgtgctaatatatgagagaatgaac |
101 |
Q |
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| T |
34680730 |
taaaacagccaccatcatgaccaactatttggttggagtattttgatgttgaatggaaa-ctataaagtcttgtatgtgctaatatatgagagaatgaac |
34680828 |
T |
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| Q |
102 |
ccaaatcctacgcaagtacactaatttatattgcgcacactccttattgattggtttgtgccaaaaatccaacatggtattagagtctaattatatggcc |
201 |
Q |
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| T |
34680829 |
ccaaatcctacgcatgtacactaatttatattgcgcacactccttactgattggtttgtgccaaaaatccaacatggtattagagtctaattatatggcc |
34680928 |
T |
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| Q |
202 |
taatggcccatgttgatccaattataaaaaattcataaaaacatgagattaggtgatcaatg |
263 |
Q |
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| T |
34680929 |
taatggcccatgttgatccaattataaaaaattcataaaaacatgaggttaggtgatcaatg |
34680990 |
T |
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