View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12518_low_21 (Length: 291)
Name: NF12518_low_21
Description: NF12518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12518_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 277
Target Start/End: Original strand, 11663312 - 11663576
Alignment:
| Q |
11 |
acatcatctgtactactgatttatcttaatacgtattacctaatttatagttagtgttgtaaggtaagtacctataattaaggacaagatgatgaaggaa |
110 |
Q |
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| T |
11663312 |
acatcatttgtactactaatttatcttaatacgtattacctaatttatagctagtgttgtaaggtaagtacctataattaaggacaagatgatgaaggaa |
11663411 |
T |
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| Q |
111 |
gaatgctatttccactttagcaagatcagcaccaggacataggcgtggaccaccaccaaatggtgcaactttcttcctggtcgaattttcatcctaagag |
210 |
Q |
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| T |
11663412 |
gaatgctatttccactttagcaagatcagcaccaggacatagacgtggaccaccaccaaatggtgcaactttcttgctggtcgaattttcatcctaagag |
11663511 |
T |
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| Q |
211 |
agacaaaattagactagatttgcaatagaataatgaacaaaagaatatgctatgaaactttcactct |
277 |
Q |
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| T |
11663512 |
agacaaaattagattagatttgcaatagaataatgaacaaaaga--atgctatgaaacttttactct |
11663576 |
T |
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