View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12519_low_12 (Length: 236)
Name: NF12519_low_12
Description: NF12519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12519_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 10098264 - 10098065
Alignment:
| Q |
14 |
cataggtagaagttcatcatctcatcaaacaaagaaacatccaactttataatatagtcataaaattatctaacatattttttcaatgtaggcacagact |
113 |
Q |
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| T |
10098264 |
cataagtagaagttcatcatctcatcaaacaaagaaacatccaactttataatatagtcataaaattatctaacatattttttcaatgtaggcacagact |
10098165 |
T |
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| Q |
114 |
attttttatactctaatttaaataagaaaacatataacttaactcattaaggagaataacttaagagcataagttatcattttcttattagggagaataa |
213 |
Q |
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| T |
10098164 |
attttctatactctgatttaaataagaaaacatataacttaactcattaaggagaataacttaagagcataagttatcattttcttattagggagaataa |
10098065 |
T |
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