View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12519_low_6 (Length: 354)
Name: NF12519_low_6
Description: NF12519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12519_low_6 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 22889015 - 22888679
Alignment:
| Q |
1 |
accttgaaatctctgaacttcctaaactacctgcagagnnnnnnnngtcgaaatttttaactgttgggttgccattgattttgctaagtttggtattcat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
22889015 |
accttgaaatctctgaacttcctaaactacctgcagagaaaaaaaagtcgaaatttttaactgttggattgccattgattttcctaagtttggtattcat |
22888916 |
T |
|
| Q |
101 |
gataactttagggggtatgtattatgtcaaattgaagaagtttgatgaggttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaa |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22888915 |
gataactttaggggttatgtattatgtcaaattgaagaagtttgatgaggttcttgaagattgggaacatgaatatggcccacgtagatttaagttcaaa |
22888816 |
T |
|
| Q |
201 |
gatctatactcagccacagagggtttcaaggaaaaggggctattgggagttggtggatttggtagagtctacaaaggtgtgataccaagttccaaacttg |
300 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22888815 |
gatctatactcagccacaaagggtttcagggaaaaggggctattgggagttggtggatttggtagagtctacaaaggtgtgatacaaagttccaaacttg |
22888716 |
T |
|
| Q |
301 |
aggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22888715 |
aggttgctgtgaaaagggtgtctcatgaatcaagaca |
22888679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 2 - 337
Target Start/End: Complemental strand, 22875644 - 22875309
Alignment:
| Q |
2 |
ccttgaaatctctgaacttcctaaactacctgcagagnnnnnnnngtcgaaatttttaactgttgggttgccattgattttgctaagtttggtattcatg |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
22875644 |
ccttgaaatctctgaacttcctaaactacctgcagagaaaaaaaagtcgaaatttttaactgttggattgcctttgattttgctaagtttggtattcatg |
22875545 |
T |
|
| Q |
102 |
ataactttagggggtatgtattatgtcaaattgaagaagtttgatgaggttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaag |
201 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22875544 |
ataactatagggattatgtattatgtcaaattgaagaagtttgatgaggttcttgaagattgggaacatcaatatggcccacatagatttaagttcaaag |
22875445 |
T |
|
| Q |
202 |
atctatactcagccacagagggtttcaaggaaaaggggctattgggagttggtggatttggtagagtctacaaaggtgtgataccaagttccaaacttga |
301 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22875444 |
atctatactcagccacaaagggtttcagggaaaaggggctattgggagttggtggatttggtagagtctacaaaggtgtgatacaaagttccaaacttga |
22875345 |
T |
|
| Q |
302 |
ggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
22875344 |
ggttgctgtgaaaagggtgtctcatgaatcaagaca |
22875309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 51 - 333
Target Start/End: Complemental strand, 22839719 - 22839437
Alignment:
| Q |
51 |
aaatttttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgagg |
150 |
Q |
| |
|
||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| ||||| |
|
|
| T |
22839719 |
aaatttttaactgttcggttgcctttgatattgctaagtttggtattcatcataactttaggggttatgtattatatcaaattgaagaagtttgttgagg |
22839620 |
T |
|
| Q |
151 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagt |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||||| |
|
|
| T |
22839619 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactctgccacgaagggtttcagggaaaaggggctactgggagt |
22839520 |
T |
|
| Q |
251 |
tggtggatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaa |
333 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22839519 |
tggtggatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctaatgaatcaa |
22839437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 51 - 337
Target Start/End: Complemental strand, 22880259 - 22879973
Alignment:
| Q |
51 |
aaatttttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgagg |
150 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | |
|
|
| T |
22880259 |
aaatttttaactgttgggttacctttgattttgctaagtttggtattcatgataactttaggggttatgtattatctcaaattgaagaagtttgatgaag |
22880160 |
T |
|
| Q |
151 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagt |
250 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| | ||||||| |||||||||||| ||||||| |
|
|
| T |
22880159 |
ttcttgaagattggaaacatgaatatggcccacgtagatttaaattcaaagatctatactcagccacaaaaggtttcagggaaaaggggctcctgggagt |
22880060 |
T |
|
| Q |
251 |
tggtggatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22880059 |
tggtggatttggtagagtctacaaaggtgtgataccaagtttcaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
22879973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 51 - 337
Target Start/End: Complemental strand, 22830698 - 22830412
Alignment:
| Q |
51 |
aaatttttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgagg |
150 |
Q |
| |
|
||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
22830698 |
aaatttttaactgttcggttgcctttgatattgctaagtttggtattcatcataactttaggggttatgtattatatcaaattgaagaagtttgatgagg |
22830599 |
T |
|
| Q |
151 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagt |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| || ||||||| |
|
|
| T |
22830598 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactctgccacgaagggtttcagggaaaaggggatactgggagt |
22830499 |
T |
|
| Q |
251 |
tggtggatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22830498 |
tggtggatttggtaaagtctacaaaggtgtgataccaagttccaaacttcaagttgctgtgaaaagggtgtctcatgaatcaagaca |
22830412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 51 - 337
Target Start/End: Complemental strand, 22825925 - 22825639
Alignment:
| Q |
51 |
aaatttttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgagg |
150 |
Q |
| |
|
||||||||||||||||||||||||| | |||| ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
22825925 |
aaatttttaactgttgggttgccatgggttttcctaagtttggtattcatgatatctttaggggttatgtattatatcaaattgaagaagtttgatgagg |
22825826 |
T |
|
| Q |
151 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagt |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||| |||||| | |||| ||||||| |
|
|
| T |
22825825 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactttgctacaaagggtttcagggaaaacgagctactgggagt |
22825726 |
T |
|
| Q |
251 |
tggtggatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22825725 |
tggtggatttggtagagtctacaaaggtgtcataccaagttccaaaattgaggttgctgtgaaaagggtctctcatgaatcaagaca |
22825639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 59 - 337
Target Start/End: Complemental strand, 22804995 - 22804717
Alignment:
| Q |
59 |
aactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgaggttcttgaa |
158 |
Q |
| |
|
||||||||||||||| || ||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||| |||| |||||||| |
|
|
| T |
22804995 |
aactgttgggttgcctttaattttcctaagtttggtattcatgataactttaggggttatttattatatcaaacggaagaagttttctgagattcttgaa |
22804896 |
T |
|
| Q |
159 |
gattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagttggtggat |
258 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22804895 |
gattgggaacaagaatatggcccacatagatttaagttcaaagatctatactttgccacaaagggtttcagggaaaaggggctattgggagttggtggat |
22804796 |
T |
|
| Q |
259 |
ttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22804795 |
ttggtagagtatacaaaggtgtgatgccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
22804717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 54 - 337
Target Start/End: Complemental strand, 22893617 - 22893334
Alignment:
| Q |
54 |
tttttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgaggttc |
153 |
Q |
| |
|
|||||||||||||||||||| || |||||| |||||||| ||||||||||||||||||||| |||||||||| ||| | ||||||||||| |||| ||| |
|
|
| T |
22893617 |
tttttaactgttgggttgcctttaattttgataagtttgatattcatgataactttaggggttatgtattatatcagacggaagaagtttgctgagattc |
22893518 |
T |
|
| Q |
154 |
ttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagttgg |
253 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||| ||||||||||||| |||||||||| |
|
|
| T |
22893517 |
ttgaagattgggaacaagaatatggcccacatagatttaagttcaaagatttgtactttgccacaaagggtttcagggaaaaggggctactgggagttgg |
22893418 |
T |
|
| Q |
254 |
tggatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22893417 |
tggatttggtagagtctacaaaggtgtgttaccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
22893334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 51 - 337
Target Start/End: Complemental strand, 22814694 - 22814408
Alignment:
| Q |
51 |
aaatttttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgagg |
150 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||| ||||| ||||| ||||| |||| |
|
|
| T |
22814694 |
aaatttttaactgttgggttgcctttgattttgctaagtttgctattcatgataactttaggggttatatattatatcaaacggaagatgtttgctgaga |
22814595 |
T |
|
| Q |
151 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagt |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| |||||| |||||| ||||||| |
|
|
| T |
22814594 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactttgccacaaaggggttcagggaaaaagggctactgggagt |
22814495 |
T |
|
| Q |
251 |
tggtggatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || |||||||| |
|
|
| T |
22814494 |
tggtggatttggtagagtctacaaaggtgtgataccgagttccaaacttgaggttgctgtgaaaagggtgtcacacgagtcaagaca |
22814408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 55 - 337
Target Start/End: Complemental strand, 22809283 - 22809001
Alignment:
| Q |
55 |
ttttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgaggttct |
154 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||| ||||||||||||| |||||| |||||||||| |||||| ||||||||||| |||| |||| |
|
|
| T |
22809283 |
ttttaactgttgggttgcctttgagtttgctaagtttgttattcatgataaccttagggattatgtattatatcaaatggaagaagtttgctgagattct |
22809184 |
T |
|
| Q |
155 |
tgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagttggt |
254 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | || ||| | |||||| ||||||||| ||| | ||||||||| |
|
|
| T |
22809183 |
tgaagattgggaacaggaatatggtccacatagatttaagttcaaagatctatattttgctacaaaaggtttcggggaaaagggtctactaggagttggt |
22809084 |
T |
|
| Q |
255 |
ggatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22809083 |
ggatttggtagagtctacaaaggtgtgatacaaagttccaaacttgaggttgctgtgaaaagggtgtctaatgaatcaagaca |
22809001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 56 - 321
Target Start/End: Complemental strand, 22858100 - 22857835
Alignment:
| Q |
56 |
tttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgaggttctt |
155 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||| ||||||| ||| ||||| || ||||||| || || || ||||||||||| | |||||||| |
|
|
| T |
22858100 |
tttaactgttgggttgcctttgattttcctaagtttgctattcataatagctttaaggattatgtatcatatcgaacagaagaagtttgctaaggttctt |
22858001 |
T |
|
| Q |
156 |
gaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagttggtg |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| || ||||||||| ||||||||||||| |
|
|
| T |
22858000 |
gaagattgggaacatgaatatggcccacatagatttaagttcaaagatatatactttgccacaaagggtttcatggtaaaggggctgttgggagttggtg |
22857901 |
T |
|
| Q |
256 |
gatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgt |
321 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
22857900 |
gatttggtagagtctacaaaggtgtgataccaaattccaaacttgaggttgttgtgaaaagggtgt |
22857835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 54 - 337
Target Start/End: Complemental strand, 22897936 - 22897650
Alignment:
| Q |
54 |
tttttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattg---aagaagtttgatgagg |
150 |
Q |
| |
|
|||||||||||||| ||||| ||| |||||||||||||||| ||||||||||| ||||||| ||| |||||| ||||| | |||||||||| |||| |
|
|
| T |
22897936 |
tttttaactgttggattgcctttggttttgctaagtttggttttcatgataaccttaggggttatttattatatcaaaaggagaaagaagtttgctgagt |
22897837 |
T |
|
| Q |
151 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagt |
250 |
Q |
| |
|
| |||||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| ||||| ||||| |
|
|
| T |
22897836 |
tgcttgaagattgggagcatgaatatggccctcataggtttaagttcaaagatttgtactttgccacaaagggtttcaaggaaaagggtctattaggagt |
22897737 |
T |
|
| Q |
251 |
tggtggatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||| || |||||||||||||| |
|
|
| T |
22897736 |
tggtggatttggtagagtctacaaaggtgtgatgccaggttccaaacttgaggttgcagtgaagagggtttcacatgaatcaagaca |
22897650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 51 - 268
Target Start/End: Complemental strand, 22885269 - 22885053
Alignment:
| Q |
51 |
aaatttttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgagg |
150 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||| | |||||||||||||||||||| ||| |||||| ||||| ||||| ||||| |||| |
|
|
| T |
22885269 |
aaatttttaactgttgggttgcctttgattttgcttagttcgctattcatgataactttagggt-tatatattatatcaaacggaagatgtttgctgaga |
22885171 |
T |
|
| Q |
151 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagt |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||| ||||||||| ||||||||||||||||| ||| |
|
|
| T |
22885170 |
ttcttgaagattgggaacatgaatatggccctcatagatttaagttcaaagatctatactttgctacaaagggtttcatggaaaaggggctattggaagt |
22885071 |
T |
|
| Q |
251 |
tggtggatttggtagagt |
268 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
22885070 |
tggtggatttggtagagt |
22885053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 337
Target Start/End: Complemental strand, 22913200 - 22913049
Alignment:
| Q |
186 |
agatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagttggtggatttggtagagtctacaaaggtgtgatac |
285 |
Q |
| |
|
||||| |||| ||||||| |||||| || ||| ||||||||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
22913200 |
agattcaagtacaaagatttatactttgcaacaaagggtttcaaggagaaggagctattaggaacaggtggatttggtagagtctacaaaggtgtgatgc |
22913101 |
T |
|
| Q |
286 |
caagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
| | ||| ||||| ||||| || ||||| || || || |||||||||||||| |
|
|
| T |
22913100 |
cgatttcaaaactcgaggtagccgtgaagagagtttcacatgaatcaagaca |
22913049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 51 - 337
Target Start/End: Original strand, 21151047 - 21151333
Alignment:
| Q |
51 |
aaatttttaactgttgggttgccattgattttgctaagtttggtattcatgataactttagggggtatgtattatgtcaaattgaagaagtttgatgagg |
150 |
Q |
| |
|
|||||||||||| || | ||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| |||| |
|
|
| T |
21151047 |
aaatttttaactattagtttgcctttgattttgcttagtttggtattcatgataactttaggggttatgtattatatcaaacggaagaagttttctgaga |
21151146 |
T |
|
| Q |
151 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatactcagccacagagggtttcaaggaaaaggggctattgggagt |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| | |||||| ||||||||| ||| ||||||| |
|
|
| T |
21151147 |
ttcttgaagattgggaacatgaatatggcccacatagatttaagttcaaagatctatattttgctacaaaaggtttcggggaaaagggtctactgggagt |
21151246 |
T |
|
| Q |
251 |
tggtggatttggtagagtctacaaaggtgtgataccaagttccaaacttgaggttgctgtgaaaagggtgtctcatgaatcaagaca |
337 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
21151247 |
tggtggatttggtagagtctacaaaggtgtgataccgagttccaaacttgaagttgctgtgaaaagggtgtctcatgaatcaagaca |
21151333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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