View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1251_low_18 (Length: 324)
Name: NF1251_low_18
Description: NF1251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1251_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 32815691 - 32815556
Alignment:
| Q |
100 |
gttgcgttgaatgaaagaatactttcttccatggctgataagaaagatgctgctgctcatccatggcatgacttagagattggtattattattaactaac |
199 |
Q |
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| T |
32815691 |
gttgcgttgaatgaaagaatactttcttccatggctgataagaaagatgctgctgctcatccatggcatgacttagagattggtattattattaactaac |
32815592 |
T |
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| Q |
200 |
tcttttttacgtttctttattcttctttctgcttca |
235 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
32815591 |
tcttttttacgtttctttattcttctttctgcttca |
32815556 |
T |
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