View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12520_low_19 (Length: 243)
Name: NF12520_low_19
Description: NF12520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12520_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 15051092 - 15051303
Alignment:
| Q |
19 |
atttaaggataccctattcgcaacacatgacatctagctcttgatgtgctagcaatgaaatatatatttccttacatgttcatgtaagaaaatattttcc |
118 |
Q |
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| T |
15051092 |
atttaaggataccctattcgcaacacatgacatctagctcttgatgtgctagcaatgaaatatatatttccttacatgttcatgtaagaaaatattttcc |
15051191 |
T |
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| Q |
119 |
ttgaaggtgagaaaaacacaaaggggaagggattgaattgtattgacttttttcagaaaatcttttctaggttaaagatagaacaacatttaagaaaaga |
218 |
Q |
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| T |
15051192 |
ttgaaggtgagaaaaacacaaaggggaagggattgaattgtattgacttttttcagaaaatcttttctaggttaaagatagaacaacatttaagaaaaga |
15051291 |
T |
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| Q |
219 |
taacaacagtga |
230 |
Q |
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| T |
15051292 |
taacaacagtga |
15051303 |
T |
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