View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12521_low_12 (Length: 406)

Name: NF12521_low_12
Description: NF12521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12521_low_12
NF12521_low_12
[»] chr6 (11 HSPs)
chr6 (28-256)||(13915780-13916008)
chr6 (309-388)||(13915648-13915727)
chr6 (72-226)||(18923431-18923585)
chr6 (42-224)||(22288605-22288787)
chr6 (33-256)||(18832326-18832552)
chr6 (45-151)||(25732850-25732956)
chr6 (306-371)||(22288458-22288523)
chr6 (14-151)||(25683988-25684122)
chr6 (303-371)||(18832599-18832667)
chr6 (303-370)||(18923662-18923729)
chr6 (306-388)||(25733111-25733193)
[»] chr3 (26 HSPs)
chr3 (5-256)||(14318900-14319151)
chr3 (28-244)||(9003784-9004000)
chr3 (42-223)||(15224057-15224238)
chr3 (42-224)||(1056468-1056650)
chr3 (309-390)||(14583753-14583834)
chr3 (44-244)||(14583903-14584103)
chr3 (303-384)||(14319198-14319279)
chr3 (42-256)||(16668421-16668638)
chr3 (303-388)||(9004059-9004144)
chr3 (303-370)||(16668685-16668752)
chr3 (72-174)||(1791891-1791993)
chr3 (72-178)||(14255285-14255391)
chr3 (303-390)||(11214274-11214361)
chr3 (303-401)||(4406814-4406912)
chr3 (306-370)||(1056322-1056386)
chr3 (306-390)||(9388828-9388912)
chr3 (42-151)||(29903501-29903610)
chr3 (42-151)||(29944667-29944776)
chr3 (42-151)||(29993821-29993930)
chr3 (75-135)||(4407080-4407140)
chr3 (303-390)||(14255516-14255603)
chr3 (303-371)||(15224318-15224386)
chr3 (185-256)||(4406959-4407030)
chr3 (303-348)||(29903762-29903807)
chr3 (303-348)||(29944928-29944973)
chr3 (303-348)||(29994082-29994127)
[»] chr4 (16 HSPs)
chr4 (28-240)||(10293315-10293527)
chr4 (6-135)||(15204665-15204794)
chr4 (42-178)||(39518214-39518350)
chr4 (303-386)||(10293169-10293252)
chr4 (33-244)||(11538637-11538848)
chr4 (81-223)||(11517799-11517941)
chr4 (303-371)||(11517651-11517719)
chr4 (304-388)||(11538493-11538577)
chr4 (304-354)||(39518462-39518512)
chr4 (303-384)||(15204962-15205043)
chr4 (75-135)||(19573794-19573854)
chr4 (306-370)||(16307751-16307815)
chr4 (75-130)||(3375669-3375724)
chr4 (185-256)||(16307865-16307936)
chr4 (185-256)||(19573673-19573744)
chr4 (312-370)||(3375429-3375487)
[»] scaffold0017 (2 HSPs)
scaffold0017 (28-242)||(178099-178312)
scaffold0017 (303-388)||(177953-178038)
[»] chr7 (3 HSPs)
chr7 (42-178)||(18421874-18422010)
chr7 (28-148)||(25209127-25209247)
chr7 (303-370)||(18421682-18421749)
[»] scaffold0411 (2 HSPs)
scaffold0411 (28-178)||(403-553)
scaffold0411 (28-178)||(4434-4584)
[»] scaffold0410 (1 HSPs)
scaffold0410 (58-224)||(9226-9392)
[»] scaffold0497 (3 HSPs)
scaffold0497 (42-224)||(7639-7821)
scaffold0497 (42-224)||(4382-4564)
scaffold0497 (303-371)||(7900-7968)
[»] scaffold0014 (2 HSPs)
scaffold0014 (42-223)||(219118-219299)
scaffold0014 (303-371)||(218970-219038)
[»] scaffold0195 (2 HSPs)
scaffold0195 (5-178)||(28745-28915)
scaffold0195 (304-370)||(28553-28619)
[»] scaffold1362 (2 HSPs)
scaffold1362 (72-178)||(1549-1655)
scaffold1362 (304-370)||(1781-1847)
[»] chr2 (9 HSPs)
chr2 (30-178)||(28377124-28377272)
chr2 (306-390)||(20415256-20415340)
chr2 (307-388)||(22766227-22766308)
chr2 (6-149)||(22766466-22766606)
chr2 (303-401)||(28377397-28377495)
chr2 (42-151)||(22749530-22749639)
chr2 (303-380)||(26869628-26869705)
chr2 (306-390)||(21170076-21170160)
chr2 (306-390)||(24423108-24423192)
[»] chr1 (1 HSPs)
chr1 (28-148)||(21163814-21163934)
[»] scaffold0063 (1 HSPs)
scaffold0063 (84-224)||(17581-17721)
[»] scaffold0272 (4 HSPs)
scaffold0272 (303-390)||(21773-21860)
scaffold0272 (303-390)||(16686-16773)
scaffold0272 (98-135)||(16941-16978)
scaffold0272 (98-135)||(22028-22065)
[»] scaffold0993 (1 HSPs)
scaffold0993 (72-148)||(3373-3449)
[»] scaffold0042 (2 HSPs)
scaffold0042 (42-161)||(220-339)
scaffold0042 (306-371)||(88-153)
[»] chr8 (3 HSPs)
chr8 (81-178)||(3835522-3835619)
chr8 (303-371)||(3835329-3835397)
chr8 (72-140)||(23373389-23373457)
[»] chr5 (8 HSPs)
chr5 (30-135)||(21518573-21518678)
chr5 (306-390)||(19475704-19475788)
chr5 (303-401)||(17449126-17449224)
chr5 (81-135)||(21417030-21417084)
chr5 (303-371)||(21416794-21416862)
chr5 (185-256)||(17449271-17449342)
chr5 (75-135)||(17449392-17449452)
chr5 (75-135)||(34060075-34060135)
[»] scaffold0719 (1 HSPs)
scaffold0719 (44-135)||(4665-4756)
[»] scaffold0201 (1 HSPs)
scaffold0201 (45-151)||(1161-1267)
[»] scaffold0012 (2 HSPs)
scaffold0012 (42-151)||(130406-130515)
scaffold0012 (84-208)||(22745-22869)
[»] scaffold0670 (1 HSPs)
scaffold0670 (84-148)||(1624-1688)
[»] scaffold0016 (1 HSPs)
scaffold0016 (306-390)||(194531-194615)
[»] scaffold1465 (1 HSPs)
scaffold1465 (306-389)||(46-129)


Alignment Details
Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 13916008 - 13915780
Alignment:
Q  28 aagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaaca 127  Q
    |||||||||||| ||||||||||||||| ||||||||||  |  ||||||||||||||||||| |||| |||||||||| || ||||||||||||||||     
T  13916008 aagatgccaccagaagggaagctgctcttcaagctatcagaagcaaaagaggaaagggagagaaaagttttcaggagcgtattaaggaagctgctgaacg 13915909  T
Q  128 gctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaagag 227  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||  |    
T  13915908 gctaagaagggaaaaagaggatcctagcctgaaggagactcagaagcctgtatcaaaagagataccttgtttcagagtcactcctgaacaagaacaaatg 13915809  T
Q  228 gccagagaaattgctgctactgagatagc 256  Q
    ||||||||||||| ||||| |||||||||    
T  13915808 gccagagaaattgttgctattgagatagc 13915780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 309 - 388
Target Start/End: Complemental strand, 13915727 - 13915648
Alignment:
Q  309 aaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgt 388  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  13915727 aaagcagtagggtatgagctggattctgagaaagctgctgtaattgcctctttagctgctgaattggaagagcaaactgt 13915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 18923431 - 18923585
Alignment:
Q  72 aaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcctgaaggagactcaga 171  Q
    ||||||| |||||| |||| ||| ||||||||||| |||||||||||||||||||||||||| |||||| |||  |||||||  || ||| || ||||||    
T  18923431 aaaagagcaaagggtgagacaagcgttcaggagcgtatcaaggaagctgctgaacagctaaggaaagaagaagctgatcctaagctaaagaaggctcaga 18923530  T
Q  172 agcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaaga 226  Q
    ||||||| ||   |||   | |||| |||||| |||| |||||||||||||||||    
T  18923531 agcctgtgtctttggaatcatcttgcttcagactcacttctgaacaagaacaaga 18923585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 224
Target Start/End: Complemental strand, 22288787 - 22288605
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||||||||||  |  ||| |||  |||||||| ||||||||||||||||  ||||||||||||| ||||||| ||||||  |||     
T  22288787 agggaagctgctcttcaagctatcagaagcaaacgagctaagggagaaagaagtgttcaggagcatatcaaggaagctgttgaacagttaagaagggaag 22288688  T
Q  142 aagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaa 224  Q
    ||||||| ||||| |||||| || ||  ||||||||| |||  |||||| ||||| || ||| ||||  |||| |||||||||    
T  22288687 aagaggaccctagtctgaagaaggctacgaagcctgtgtcattggagatgccttgctttagactcacccctgagcaagaacaa 22288605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 256
Target Start/End: Original strand, 18832326 - 18832552
Alignment:
Q  33 gccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaac-agc-- 129  Q
    ||||| |||| |||||||||||| ||| ||||||  |  || ||||  |||||||||||||||||||||||||| || ||||||| |||||||| |||      
T  18832326 gccactaaaaaggaagctgctctccaaactatcagaagcaagagagctaagggagagagaagtgttcaggagcgaatgaaggaagttgctgaacaagcca 18832425  T
Q  130 taagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaagaggc 229  Q
     |||| |||||  ||| || || || |  ||| || || ||||||||||  ||  |||||| |||||||||||||||||  ||||||||||  || ||||    
T  18832426 gaagagaagaagtagaagagccaagtcccaagaaggctaagaagcctgtgccattggagatgccttgtttcagagtcactcctgaacaagagtaaaaggc 18832525  T
Q  230 cagagaaattgctgctactgagatagc 256  Q
     |||||||||| ||||| |||||||||    
T  18832526 tagagaaattgttgctaatgagatagc 18832552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 25732850 - 25732956
Alignment:
Q  45 gaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaag 144  Q
    ||||||||||| ||| | ||||  | ||||||||  || ||||| ||||||||||||||||| || ||||||||||||||||| || ||| ||||| |||    
T  25732850 gaagctgctcttcaaaccatcagaactaaaagagctaaaggagaaagaagtgttcaggagcgtatgaaggaagctgctgaacaactcagagaagaagaag 25732949  T
Q  145 aggatcc 151  Q
    |||||||    
T  25732950 aggatcc 25732956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 22288523 - 22288458
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaa 371  Q
    |||||||||||||||||| | |||||| |||||||||||||||| ||||| ||| |||||||||||    
T  22288523 ctcaaagcagcagggtataatctggatgctgagaaagctgctgtgattgcttctctagctgctgaa 22288458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 25683988 - 25684122
Alignment:
Q  14 agagccagatgttcaagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaag 113  Q
    ||||||||| |||||||||||  ||| |   ||||||||||| ||| | ||||  | ||||||||  || || || ||||||||||||||||| || |||    
T  25683988 agagccagaagttcaagatgctgccaga---gaagctgctcttcaaaccatcagaactaaaagagctaaaggtgaaagaagtgttcaggagcgtatgaag 25684084  T
Q  114 gaagctgctgaacagctaagaaaagaaaaagaggatcc 151  Q
    ||||||||| ||||| | ||||| ||| ||||||||||    
T  25684085 gaagctgcttaacagttgagaaatgaagaagaggatcc 25684122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 18832599 - 18832667
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaa 371  Q
    ||||||||| ||||| ||||| | |||||| |||||||||||| ||| ||||| ||| |||||||||||    
T  18832599 cagctcaaaacagcaaggtataatctggatgctgagaaagctgttgtgattgcttctatagctgctgaa 18832667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 18923662 - 18923729
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctga 370  Q
    |||||||| ||||||||||| || || | ||||||||||||||| |  |||||||| |||||||||||    
T  18923662 cagctcaaggcagcagggtacgaacttgctcctgagaaagctgcagaaattgcctcattagctgctga 18923729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 25733111 - 25733193
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgt 388  Q
    |||||||| || ||||||||||| ||| |||||||||||||||| ||||| || || | ||||||  | ||||| ||||||||    
T  25733111 ctcaaagctgctgggtatgagcttgatgctgagaaagctgctgtgattgcttccttggttgctgagattgaagaagaaactgt 25733193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 5 - 256
Target Start/End: Original strand, 14318900 - 14319151
Alignment:
Q  5 gagaagcagagagccagatgttcaagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggag 104  Q
    ||||| ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||  || ||||||||||||||||| | |||||||||||||    
T  14318900 gagaaacagagagccagatattcaagatgtcaccagaagggaagctgctctacaagctatcagaaacaaaagaggaaagggagaaacaagtgttcaggag 14318999  T
Q  105 cgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagag 204  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||  | |||   |||||  ||   |||||||| |||| |||||| |||||||||||||    
T  14319000 cgcattaaggaagctgctgaacagctaagaagagagaaagaggagacaagctctaaggaagctagaaagcctgtctcaatggagatgccttgtttcagag 14319099  T
Q  205 tcacgtctgaacaagaacaagaggccagagaaattgctgctactgagatagc 256  Q
    ||||  |||||||||| |||||||| |  ||   ||||||||||||||||||    
T  14319100 tcacccctgaacaagagcaagaggctatggattatgctgctactgagatagc 14319151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 28 - 244
Target Start/End: Original strand, 9003784 - 9004000
Alignment:
Q  28 aagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaaca 127  Q
    |||||||||||||||||||||||||||| ||||||||||  |  ||||||| |||||||||||||||  |||||||||| |||| |||||||||||||||    
T  9003784 aagatgccaccaaaagggaagctgctcttcaagctatcagaagcaaaagagcaaagggagagagaagcattcaggagcgtatcagggaagctgctgaaca 9003883  T
Q  128 gctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaagag 227  Q
    ||||||||||||| |||  ||||||||  ||||| || ||||||||||||||||   |||   |||||| |||||| ||||  |||| |||||| ||  |    
T  9003884 gctaagaaaagaagaagctgatcctagtttgaagaaggctcagaagcctgtatccttggaatcaccttgcttcagactcacccctgagcaagaagaaagg 9003983  T
Q  228 gccagagaaattgctgc 244  Q
     ||||||||||||||||    
T  9003984 accagagaaattgctgc 9004000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 15224057 - 15224238
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||||||||||  |  |||||||  ||| |||| |||| |||||||||||| ||||||||||||||||||||| ||||||  |||     
T  15224057 agggaagctgctcttcaagctatcagaagcaaaagagctaagtgagaaagaaatgttcaggagcgaatcaaggaagctgctgaacagttaagaagggaag 15224156  T
Q  142 aagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaaca 223  Q
    ||||||| || || |||||| || ||||||||||||| |||  ||||| |||||| || ||| ||||  |||| ||||||||    
T  15224157 aagaggaccccagtctgaagaaggctcagaagcctgtgtcattggagacaccttgctttagactcacccctgagcaagaaca 15224238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 42 - 224
Target Start/End: Complemental strand, 1056650 - 1056468
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||||||||||  |  ||| ||| |||| |||| ||||||||||||||||| ||||||||||||||||||||||||| ||  |||     
T  1056650 agggaagctgctcttcaagctatcagaagcaaacgagcaaagagagaaagaagtgttcaggagcgtatcaaggaagctgctgaacagctaaaaagggaat 1056551  T
Q  142 aagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaa 224  Q
    |||  ||||| || || |||||| ||||||||||||| ||   ||||  |||||| || ||| ||||  ||||||||||||||    
T  1056550 aagcagatcccagtctcaaggaggctcagaagcctgtgtctttggagtcaccttgctttagactcacccctgaacaagaacaa 1056468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 14583834 - 14583753
Alignment:
Q  309 aaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||    
T  14583834 aaagcagcagggtatgaggtggatgctgagaaagctgctattattaactcattagctgctgaattggaagaggaaactgtca 14583753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 244
Target Start/End: Complemental strand, 14584103 - 14583903
Alignment:
Q  44 ggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaa 143  Q
    |||||||||||| ||| ||||||  |  ||||||| ||| ||||||||||||||||||||||| || |||||||||||||||||    |||| ||||       
T  14584103 ggaagctgctctccaatctatcagaagcaaaagagcaaaaggagagagaagtgttcaggagcgtatgaaggaagctgctgaacaagccagaagagaatct 14584004  T
Q  144 gaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaagaggccagagaaattgctg 243  Q
    || || ||||| |  ||| || || ||||||| ||  ||| ||| || |||||||||||||||||  |||||||||| |||||||| |||||||||||||    
T  14584003 gaagagcctagtccaaagaaggctaagaagccagtgccaatggaaatgccttgtttcagagtcactcctgaacaagagcaagaggctagagaaattgctg 14583904  T
Q  244 c 244  Q
    |    
T  14583903 c 14583903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 14319198 - 14319279
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaa 384  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||||||||| | || ||||||||||    
T  14319198 cagctcaaagcagtagggtatgaaatggatcctgagaaagctgctgtttttgcctctttagctgctaagtttgaagaggaaa 14319279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 256
Target Start/End: Original strand, 16668421 - 16668638
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaaca-gcta--agaaaag 138  Q
    |||||||||||||| |||||  |||  |  |||||||  |||||||||||||||||||||||||| || ||||||| ||||||||| || |  ||| |||    
T  16668421 agggaagctgctcttcaagccctcataagcaaaagagctaagggagagagaagtgttcaggagcgaatgaaggaagttgctgaacaagccagaagagaag 16668520  T
Q  139 aaaaagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaagaggccagagaaat 238  Q
    ||  ||| || || || |  ||| || || |||| | |||  ||  |||||| |||||||||||||||||  |||||||||| |||||||| ||||||||    
T  16668521 aagcagaagagccaagtcccaagaaggctaagaaacatgtgccattggagatgccttgtttcagagtcactcctgaacaagagcaagaggctagagaaat 16668620  T
Q  239 tgctgctactgagatagc 256  Q
    |||||||| |||||||||    
T  16668621 tgctgctaatgagatagc 16668638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 9004059 - 9004144
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgt 388  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || ||||| ||||| ||||||||  | ||||| ||||||||    
T  9004059 cagctcaaagcagcagggtatgagctggatgctgagaaagctgcggtaattgcttctttggctgctgagattgaagaagaaactgt 9004144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 16668685 - 16668752
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctga 370  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||    
T  16668685 cagctcaaagcagcagggtatgagttggatgctgagaaagcttctgtaattgcttctttagctgctga 16668752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 1791891 - 1791993
Alignment:
Q  72 aaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcctgaaggagactcaga 171  Q
    ||||||| |||||| |||| ||| ||||||||||| |||||||||||||||||||||||||| |||||| |||  |||||||  || ||| || ||||||    
T  1791891 aaaagagcaaagggtgagacaagcgttcaggagcgtatcaaggaagctgctgaacagctaaggaaagaagaagctgatcctaagctaaagaaggctcaga 1791990  T
Q  172 agc 174  Q
    |||    
T  1791991 agc 1791993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 14255285 - 14255391
Alignment:
Q  72 aaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcctgaaggagactcaga 171  Q
    |||||||  ||||| |||| |||  |||||||||| |||||||||||||||||||||||||| |||||| |||  |||||||| || ||| || ||||||    
T  14255285 aaaagagctaagggtgagacaagcattcaggagcgtatcaaggaagctgctgaacagctaaggaaagaagaagctgatcctaggctaaagaaggctcaga 14255384  T
Q  172 agcctgt 178  Q
    |||||||    
T  14255385 agcctgt 14255391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 390
Target Start/End: Original strand, 11214274 - 11214361
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    |||||||| ||||| ||||||||||| | ||||||||| |||||||| || ||  ||||| |||||||||||||||||||| ||||||    
T  11214274 cagctcaaggcagctgggtatgagcttgctcctgagaaggctgctgtgatagctactttaactgctgaattggaagaggaagctgtca 11214361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 303 - 401
Target Start/End: Complemental strand, 4406912 - 4406814
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtcagtgaacgagca 401  Q
    |||||||| ||||||||||||||||| | ||||||||||||||| |  ||||| || || ||||||||| | |||||||||||||| || ||| |||||    
T  4406912 cagctcaaggcagcagggtatgagcttgctcctgagaaagctgcagaaattgcttccttggctgctgaacttgaagaggaaactgttagggaaggagca 4406814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 1056386 - 1056322
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctga 370  Q
    |||||||||||||||||||| |||||| |||| ||||||| ||| ||||| ||||||||||||||    
T  1056386 ctcaaagcagcagggtatgaactggatgctgataaagctgttgtgattgcttctttagctgctga 1056322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 9388828 - 9388912
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    ||||| || |||||||||||||| |  ||||||||||| ||||| ||||| ||||||||||||||||| ||| | ||||||||||    
T  9388828 ctcaaggctgcagggtatgagcttgcccctgagaaagcagctgtaattgcttctttagctgctgaattagaacaagaaactgtca 9388912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 29903501 - 29903610
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||| | ||||  || |||||||  || ||||| ||||||||||| ||||| || |||||||||||||||||  |||| || |||     
T  29903501 agggaagctgctcttcaaaccatcagaaacaaaagagctaaaggagaaagaagtgttcaagagcgtatgaaggaagctgctgaacaattaaggaatgaag 29903600  T
Q  142 aagaggatcc 151  Q
    ||||||||||    
T  29903601 aagaggatcc 29903610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 29944667 - 29944776
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||| | ||||  || |||||||  || ||||| ||||||||||| ||||| || |||||||||||||||||  |||| || |||     
T  29944667 agggaagctgctcttcaaaccatcagaaacaaaagagctaaaggagaaagaagtgttcaagagcgtatgaaggaagctgctgaacaattaaggaatgaag 29944766  T
Q  142 aagaggatcc 151  Q
    ||||||||||    
T  29944767 aagaggatcc 29944776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 29993821 - 29993930
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||| | ||||  || |||||||  || ||||| ||||||||||| ||||| || |||||||||||||||||  |||| || |||     
T  29993821 agggaagctgctcttcaaaccatcagaaacaaaagagctaaaggagaaagaagtgttcaagagcgtatgaaggaagctgctgaacaattaaggaatgaag 29993920  T
Q  142 aagaggatcc 151  Q
    ||||||||||    
T  29993921 aagaggatcc 29993930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 4407140 - 4407080
Alignment:
Q  75 agaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaa 135  Q
    |||| ||||||||||||||| ||||||||||| || || ||||||||||||||||| ||||    
T  4407140 agagcaaagggagagagaagcgttcaggagcgtatgaaagaagctgctgaacagctcagaa 4407080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 390
Target Start/End: Original strand, 14255516 - 14255603
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    |||||||| ||||||||||||||||| | ||||||||||||||| |  ||| | || |||||||||||| | | ||| ||||||||||    
T  14255516 cagctcaaggcagcagggtatgagcttgctcctgagaaagctgcagaaatttcttcattagctgctgaaattgcagaagaaactgtca 14255603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 15224318 - 15224386
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaa 371  Q
    ||||||||||||||||||||| | ||||||  ||||||||||| ||| ||||| ||  |||||||||||    
T  15224318 cagctcaaagcagcagggtataatctggatgttgagaaagctgttgtgattgcttcactagctgctgaa 15224386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 4407030 - 4406959
Alignment:
Q  185 ggagataccttgtttcagagtcacgtctgaacaagaacaagaggccagagaaattgctgctactgagatagc 256  Q
    |||||| |||||||||||| ||||  |||||||||| ||| |||| || ||  |||||||||||||||||||    
T  4407030 ggagatgccttgtttcagactcactcctgaacaagagcaaaaggctagggattttgctgctactgagatagc 4406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 29903762 - 29903807
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctg 348  Q
    ||||||||||| ||||||||||  |||||| |||||||||||||||    
T  29903762 cagctcaaagctgcagggtatgtactggatgctgagaaagctgctg 29903807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 29944928 - 29944973
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctg 348  Q
    ||||||||||| ||||||||||  |||||| |||||||||||||||    
T  29944928 cagctcaaagctgcagggtatgtactggatgctgagaaagctgctg 29944973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 29994082 - 29994127
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctg 348  Q
    ||||||||||| ||||||||||  |||||| |||||||||||||||    
T  29994082 cagctcaaagctgcagggtatgtactggatgctgagaaagctgctg 29994127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 9e-43; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 28 - 240
Target Start/End: Complemental strand, 10293527 - 10293315
Alignment:
Q  28 aagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaaca 127  Q
    |||||||||||| ||||||||||||||| ||||||||||  |  ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10293527 aagatgccaccagaagggaagctgctcttcaagctatcagaagcaaaagagcaaagggagagagaagtgttcaggagcgtatcaaggaagctgctgaaca 10293428  T
Q  128 gctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaagag 227  Q
     |||||||  ||| ||| |||||| || |||||| || ||||||||||||| ||   ||||  |||||| |||||| ||||  |||| |||||||||  |    
T  10293427 actaagaagggaagaagcggatcccagtctgaagaaggctcagaagcctgtgtctttggagtcaccttgcttcagactcacacctgagcaagaacaaagg 10293328  T
Q  228 gccagagaaattg 240  Q
     ||||||||||||    
T  10293327 accagagaaattg 10293315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 15204665 - 15204794
Alignment:
Q  6 agaagcagagagccagatgttcaagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagc 105  Q
    |||| ||||||| |||||||||||||||||||||  ||||||||| |||| ||||||||||  || || |||||||||||||||| ||||||||||||||    
T  15204665 agaaacagagagacagatgttcaagatgccaccaggagggaagctactcttcaagctatcagaaagaagagaggaaagggagagacaagtgttcaggagc 15204764  T
Q  106 gcatcaaggaagctgctgaacagctaagaa 135  Q
    |||| ||||||||| |||||||||| ||||    
T  15204765 gcatgaaggaagctactgaacagctcagaa 15204794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 39518214 - 39518350
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||||||||||| |  ||||||| ||||||||| ||||||||||||||| | || |||||||||||||||||||||||||  |||     
T  39518214 agggaagctgctcttcaagctatcaaaagcaaaagagcaaagggagaaagaagtgttcaggagagaatgaaggaagctgctgaacagctaagaagggaag 39518313  T
Q  142 aagaggatcctagcctgaaggagactcagaagcctgt 178  Q
    |||  ||||| || ||||||||| |||||||||||||    
T  39518314 aagcagatcccagtctgaaggaggctcagaagcctgt 39518350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 386
Target Start/End: Complemental strand, 10293252 - 10293169
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaact 386  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  10293252 cagctcaaagcagcagggtatgagttggatgctgagaaagctgctgttattgcttctttagctgctgaattggaagagcaaact 10293169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 33 - 244
Target Start/End: Complemental strand, 11538848 - 11538637
Alignment:
Q  33 gccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaa 132  Q
    |||||||||| |||||||||||| ||||||||||  || ||||||| ||||||||| || || ||||||||||| || |||||||||||| || ||||||    
T  11538848 gccaccaaaaaggaagctgctcttcaagctatcagaaacaaaagagtaaagggagaaaggagcgttcaggagcgtatgaaggaagctgctaaatagctaa 11538749  T
Q  133 gaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaagaggccag 232  Q
    |||||||| |||  |||||||| |||||| || || |||||||||| ||   ||||  |||||| |||||| ||||   ||| |||||||||  | | ||    
T  11538748 gaaaagaagaagttgatcctagtctgaagaaggcttagaagcctgtgtctttggagtcaccttgcttcagactcactcttgagcaagaacaaaggactag 11538649  T
Q  233 agaaattgctgc 244  Q
    ||||||||||||    
T  11538648 agaaattgctgc 11538637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 11517941 - 11517799
Alignment:
Q  81 aagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgtat 180  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||||| ||||||  |||  |||||||||||| ||||||||| ||||||||||||| |    
T  11517941 aagggagaaagaagtgttcatgagcgtatcaaggaagctgctgaacagttaagaagggaagcagaggatcctagtctgaaggaggctcagaagcctgtgt 11517842  T
Q  181 caaaggagataccttgtttcagagtcacgtctgaacaagaaca 223  Q
    ||  ||||| |||||| || ||| ||||  |||| ||||||||    
T  11517841 cattggagacaccttgctttagactcacccctgagcaagaaca 11517799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 371
Target Start/End: Complemental strand, 11517719 - 11517651
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaa 371  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||| ||||| ||| |||||||||||    
T  11517719 cagctcaaagcagcagggtataatctggatgctgagaaagctgctgtgattgcttctctagctgctgaa 11517651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 388
Target Start/End: Complemental strand, 11538577 - 11538493
Alignment:
Q  304 agctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgt 388  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||| ||||| ||| | ||||||||| | |||||  |||||||    
T  11538577 agctcaaagcagcagggtatgaactggatgctgagaaaactgctgtgattgcttctcttgctgctgaaattgaagaacaaactgt 11538493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 354
Target Start/End: Original strand, 39518462 - 39518512
Alignment:
Q  304 agctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattg 354  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  39518462 agctcaaagcagcagggtatgaactggatgctgagaaagctgctgtgattg 39518512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 15204962 - 15205043
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaa 384  Q
    |||||||| ||||||||||||| ||    |||||| | |||||||||| ||||||||||||||||||| || ||||||||||    
T  15204962 cagctcaaggcagcagggtatgtgcctactcctgaaacagctgctgtttttgcctctttagctgctgagtttgaagaggaaa 15205043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 19573854 - 19573794
Alignment:
Q  75 agaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaa 135  Q
    |||| ||||||||||||||| ||||||||||| || || ||||||||||||||||| ||||    
T  19573854 agagcaaagggagagagaagcgttcaggagcgtatgaaagaagctgctgaacagctcagaa 19573794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 16307815 - 16307751
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctga 370  Q
    ||||| ||||||||||||||||| | |||||| |||||||| |  |||||||| |||||||||||    
T  16307815 ctcaaggcagcagggtatgagcttgctcctgaaaaagctgcagaaattgcctcgttagctgctga 16307751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 3375724 - 3375669
Alignment:
Q  75 agaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagct 130  Q
    |||| ||||||||||||||| ||||| ||||| || || |||||||||||||||||    
T  3375724 agagcaaagggagagagaagcgttcaagagcgtatgaaagaagctgctgaacagct 3375669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 16307936 - 16307865
Alignment:
Q  185 ggagataccttgtttcagagtcacgtctgaacaagaacaagaggccagagaaattgctgctactgagatagc 256  Q
    |||||| |||||||||||| ||||   ||||||||| |||||||| || ||  |||||||||||||||||||    
T  16307936 ggagatgccttgtttcagactcactcttgaacaagagcaagaggctagggattttgctgctactgagatagc 16307865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 19573744 - 19573673
Alignment:
Q  185 ggagataccttgtttcagagtcacgtctgaacaagaacaagaggccagagaaattgctgctactgagatagc 256  Q
    |||||| |||||||||||| ||||  |||||||||| |||||||| || ||   ||||||||||||||||||    
T  19573744 ggagatgccttgtttcagactcactcctgaacaagagcaagaggctagggattatgctgctactgagatagc 19573673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 3375487 - 3375429
Alignment:
Q  312 gcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctga 370  Q
    ||||||||||||||| | | |||||||||||||||||  ||||| ||| ||||||||||    
T  3375487 gcagcagggtatgaggttgctcctgagaaagctgctgaaattgcttctctagctgctga 3375429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 178312 - 178099
Alignment:
Q  28 aagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaaca 127  Q
    |||||||||||| ||||||| ||||||| || |||||||  |  ||||||| |||||||||||||||  |||||||||| ||||||||||||||||||||    
T  178312 aagatgccaccagaagggaatctgctct-caggctatcagaagcaaaagagcaaagggagagagaagcattcaggagcgtatcaaggaagctgctgaaca 178214  T
Q  128 gctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaagag 227  Q
    ||||||||||||| |||  ||||||||  ||||| || ||||||||||||||||   |||   |||||| |||||| ||||  |||| |||||| ||  |    
T  178213 gctaagaaaagaagaagctgatcctagtttgaagaaggctcagaagcctgtatctttggaatcaccttgcttcagactcacccctgagcaagaagaaagg 178114  T
Q  228 gccagagaaattgct 242  Q
     ||||||||||||||    
T  178113 accagagaaattgct 178099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 388
Target Start/End: Complemental strand, 178038 - 177953
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgt 388  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||  | ||||| ||||||||    
T  178038 cagctaaaagcagcagggtatgaactggatgctgagaaagctgctgtgattgcttctttagctgctgagattgaagaagaaactgt 177953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 18422010 - 18421874
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||||||||||  |  ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||  |||     
T  18422010 agggaagctgctcttcaagctatcataagcaaaagagcaaagggagaaagaagtgttcaggagcgtatcaaggaagctgctgaacagctaagaagggaag 18421911  T
Q  142 aagaggatcctagcctgaaggagactcagaagcctgt 178  Q
    ||| |||||| || ||||| ||| |||||||||||||    
T  18421910 aagcggatcccagtctgaaagaggctcagaagcctgt 18421874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 25209127 - 25209247
Alignment:
Q  28 aagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaaca 127  Q
    ||||||| |||| |||||||| ||||||  | || ||||  |||||||||| ||||||||| ||||| ||||||||||| || || ||||||||| ||||    
T  25209127 aagatgctaccagaagggaagttgctcttgatgcaatcagaaataaaagagcaaagggagaaagaagcgttcaggagcgtatgaaagaagctgctaaaca 25209226  T
Q  128 gctaagaaaagaaaaagagga 148  Q
    |||||||| ||| ||||||||    
T  25209227 gctaagaacagagaaagagga 25209247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 18421749 - 18421682
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctga 370  Q
    ||||| ||||||||||||||||| |||||| |||| ||||||| ||| ||||| ||||||||||||||    
T  18421749 cagctaaaagcagcagggtatgaactggatgctgataaagctgatgtgattgcttctttagctgctga 18421682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 178
Target Start/End: Original strand, 403 - 553
Alignment:
Q  28 aagatgccaccaaaagggaagctgctctacaagctatcaagaat-aaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaac 126  Q
    ||||||| |||| |||||||||||||||  | || |||| |||| ||||||| |||||||||||||||  |||||||||| |||||||||||||||||||    
T  403 aagatgctaccagaagggaagctgctcttgatgcaatca-gaatcaaaagagcaaagggagagagaagcattcaggagcgtatcaaggaagctgctgaac 501  T
Q  127 agctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgt 178  Q
    |||||||||||||| |||  ||||||||  ||||| || |||||||||||||    
T  502 agctaagaaaagaagaagctgatcctagtttgaagaaggctcagaagcctgt 553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 178
Target Start/End: Original strand, 4434 - 4584
Alignment:
Q  28 aagatgccaccaaaagggaagctgctctacaagctatcaagaat-aaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaac 126  Q
    ||||||| |||| |||||||||||||||  | || |||| |||| ||||||| |||||||||||||||  |||||||||| |||||||||||||||||||    
T  4434 aagatgctaccagaagggaagctgctcttgatgcaatca-gaatcaaaagagcaaagggagagagaagcattcaggagcgtatcaaggaagctgctgaac 4532  T
Q  127 agctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgt 178  Q
    |||||||||||||| |||  ||||||||  ||||| || |||||||||||||    
T  4533 agctaagaaaagaagaagctgatcctagtttgaagaaggctcagaagcctgt 4584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 9392 - 9226
Alignment:
Q  58 aagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcct 157  Q
    |||||||||| |  |||||||  |||||||| ||||||||||| || || ||||||||||||||||||||| ||||||  ||| |||||||||||||  |    
T  9392 aagctatcaaaaggaaaagagctaagggagaaagaagtgttcaagaacgtatcaaggaagctgctgaacagttaagaagggaagaagaggatcctagttt 9293  T
Q  158 gaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaa 224  Q
    |||| || || ||| |||||| |||| ||||||||||||||| ||||||||  |||| |||||||||    
T  9292 gaagaaggctaagatgcctgtctcaatggagataccttgttttagagtcacacctgagcaagaacaa 9226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 224
Target Start/End: Original strand, 7639 - 7821
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||||||||||  |  | |||||  |||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||  |||     
T  7639 agggaagctgctcttcaagctatcagaagcagaagagctaaggaagaaagaagtgttcaggagcgaatcaaggaagctgctgaacagttaagaagggaag 7738  T
Q  142 aagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaa 224  Q
    ||||||| ||||| |||||| || || |||||||||| |||  ||||| |||||| || ||| ||||  |||| |||||||||    
T  7739 aagaggagcctagtctgaagaaggctaagaagcctgtgtcattggagacaccttgctttagactcacccctgagcaagaacaa 7821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 224
Target Start/End: Original strand, 4382 - 4564
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||| ||| ||||||||||  |  | |||||  |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||  |||     
T  4382 agggaagctgttcttcaagctatcagaagcagaagagctaagggagaaagaagtgttcaggagcgaatcaaggaagctgctgaacagttaagaagggaag 4481  T
Q  142 aagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaacaa 224  Q
    ||||||| || || |||||| ||  | |||||||||| |||  ||||| |||||| || ||| ||||  |||| |||||||||    
T  4482 aagaggagcccagtctgaagaaggttaagaagcctgtgtcattggagacaccttgctttagactcacccctgagcaagaacaa 4564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 7900 - 7968
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaa 371  Q
    |||||||||||||||||||| || |||||| |||||||||||||||| ||||| ||| |||||||||||    
T  7900 cagctcaaagcagcagggtaagatctggatgctgagaaagctgctgtgattgcttctctagctgctgaa 7968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 219299 - 219118
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    ||||||||| |||| |||||||| | ||  |||||||  |||||||| ||||||||| ||||||| ||||||||||||||||||||| ||||||  |||     
T  219299 agggaagctactcttcaagctattaggagcaaaagagctaagggagaaagaagtgttaaggagcgaatcaaggaagctgctgaacagttaagaagggaag 219200  T
Q  142 aagaggatcctagcctgaaggagactcagaagcctgtatcaaaggagataccttgtttcagagtcacgtctgaacaagaaca 223  Q
    ||||||| || || |||||| || ||||||||||||| |||  ||||| |||||| || ||| ||||  |||| ||||||||    
T  219199 aagaggaccccagtctgaagaaggctcagaagcctgtgtcattggagacaccttgctttagactcacccctgagcaagaaca 219118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 371
Target Start/End: Complemental strand, 219038 - 218970
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaa 371  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||| ||||| ||| ||||| |||||    
T  219038 cagctcaaagcagcagggtataatctggatgctgagaaagctgctgtgattgcttctctagctactgaa 218970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 28915 - 28745
Alignment:
Q  5 gagaagcagagagccagatgttcaagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggag 104  Q
    ||||| |||||||||||| |||||||||||  | |   ||||||||||||| ||||||||||  |  ||||||| ||||||||| |||||||||||||||    
T  28915 gagaaacagagagccagaggttcaagatgctgcta---gggaagctgctcttcaagctatcagaagaaaaagagcaaagggagaaagaagtgttcaggag 28819  T
Q  105 cgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgt 178  Q
    ||  |||| ||||||| ||||| ||||||||| ||| |||  ||||| || ||||| ||| |||||||||||||    
T  28818 cgtgtcaaagaagctgttgaacggctaagaaaggaagaagctgatcccagtctgaaagaggctcagaagcctgt 28745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 370
Target Start/End: Complemental strand, 28619 - 28553
Alignment:
Q  304 agctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctga 370  Q
    |||| ||||||||||||||||||||  || |||||||||||||||| || || ||  ||||||||||    
T  28619 agctaaaagcagcagggtatgagctaaatgctgagaaagctgctgtgatcgcttcactagctgctga 28553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1362 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold1362
Description:

Target: scaffold1362; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 1549 - 1655
Alignment:
Q  72 aaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcctgaaggagactcaga 171  Q
    ||||||| ||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||| |||  ||||||||  ||||| || ||||||    
T  1549 aaaagagcaaagggagagacaagcattcaggagcgtatcaaggaagctgctgaacagctaagaaaagaagaagttgatcctaggttgaagaaggctcaga 1648  T
Q  172 agcctgt 178  Q
    |||||||    
T  1649 agcctgt 1655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1362; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 370
Target Start/End: Original strand, 1781 - 1847
Alignment:
Q  304 agctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctga 370  Q
    ||||||| ||||||||||||||||| | ||||||||||||||| | |||||| || || ||||||||    
T  1781 agctcaaggcagcagggtatgagcttgctcctgagaaagctgcagatattgcttcgttggctgctga 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 178
Target Start/End: Original strand, 28377124 - 28377272
Alignment:
Q  30 gatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagc 129  Q
    ||||| |||| |||||||||||||||  | || ||||  |  ||||||| |||||| |||| ||| ||||||||||| ||||||||||||||||||||||    
T  28377124 gatgctaccagaagggaagctgctcttgatgcaatcagaagcaaaagagcaaagggtgagacaagcgttcaggagcgtatcaaggaagctgctgaacagc 28377223  T
Q  130 taagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgt 178  Q
    ||||||||||| |||  ||||||||  ||||| || || ||||||||||    
T  28377224 taagaaaagaagaagctgatcctaggttgaagaaggctgagaagcctgt 28377272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 20415256 - 20415340
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    ||||| ||||||||||||||||| | || ||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||    
T  20415256 ctcaaggcagcagggtatgagcttgctcttgagaaagcagcttttattgcctctctggctgctgaattggaagaggaaactgtca 20415340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 22766308 - 22766227
Alignment:
Q  307 tcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgt 388  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||| |||||||| || ||| | ||||| ||||||||    
T  22766308 tcaaagcagcagggtatgagctggatgctgagaaagctgcggtaattgcttctttagccgcagaaattgaagaagaaactgt 22766227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 22766606 - 22766466
Alignment:
Q  6 agaagcagagagccagatgttcaagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagc 105  Q
    |||| |||||||||| | |||||||||||  ||| |   ||||||||||| ||| | ||||  ||||||||||  || ||||| ||||||||||||||||    
T  22766606 agaaacagagagccataagttcaagatgctgccaga---gaagctgctcttcaaaccatcagaaataaaagagctaaaggagaaagaagtgttcaggagc 22766510  T
Q  106 gcatcaaggaagctgctgaacagctaagaaaagaaaaagaggat 149  Q
    | ||  ||||||||||||||||||| ||||| ||| ||||||||    
T  22766509 gtatgcaggaagctgctgaacagctgagaaatgaagaagaggat 22766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 303 - 401
Target Start/End: Original strand, 28377397 - 28377495
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtcagtgaacgagca 401  Q
    |||||||||||||||||||||||||| | |||||||||| |||| |  ||||| || || ||||||||| | |||||||||||||| || ||| |||||    
T  28377397 cagctcaaagcagcagggtatgagcttgctcctgagaaacctgcagaaattgcttccttggctgctgaacttgaagaggaaactgttagggaaggagca 28377495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 22749530 - 22749639
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||| ||||||  || |||||||  || ||||| |||| |||||||||||| || |||||||||||||||||  | ||||| |||     
T  22749530 agggaagctgctcttcaatctatcagaaacaaaagagctaaaggagaaagaaatgttcaggagcgtatgaaggaagctgctgaacaattgagaaatgaag 22749629  T
Q  142 aagaggatcc 151  Q
    ||||||||||    
T  22749630 aagaggatcc 22749639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 380
Target Start/End: Complemental strand, 26869705 - 26869628
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagag 380  Q
    ||||| || ||||||||||||| ||  | |||||| | |||||||||| ||||||||||||||||||| || ||||||    
T  26869705 cagctaaaggcagcagggtatgtgcctgctcctgaaacagctgctgtttttgcctctttagctgctgagtttgaagag 26869628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 21170076 - 21170160
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    ||||| || |||||||||||||| | |||||| || |||||||  || ||  |||||||||||||||||||| | ||||||||||    
T  21170076 ctcaaggctgcagggtatgagcttgctcctgaaaaggctgctgagatggctgctttagctgctgaattggaacaagaaactgtca 21170160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 24423108 - 24423192
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    ||||| || ||||| |||||||| |||||||||||||| ||||| |||||  || | ||| ||||  | ||||||||||||||||    
T  24423108 ctcaaggctgcaggatatgagcttgatcctgagaaagcagctgtaattgctactctggcttctgagatagaagaggaaactgtca 24423192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 21163934 - 21163814
Alignment:
Q  28 aagatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaaca 127  Q
    ||||||| |||| |||||||||||||||  | || ||||  |||||||||| ||||||||  ||||||||||||||||| || || ||||||||||||||    
T  21163934 aagatgctaccagaagggaagctgctcttgatgcaatcagaaataaaagagcaaagggagcaagaagtgttcaggagcgtatgaaagaagctgctgaaca 21163835  T
Q  128 gctaagaaaagaaaaagagga 148  Q
    |||||||| ||| ||||||||    
T  21163834 gctaagaacagagaaagagga 21163814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 84 - 224
Target Start/End: Complemental strand, 17721 - 17581
Alignment:
Q  84 ggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgtatcaa 183  Q
    ||||| ||||||||||| || || |||||||||||| |||||||| ||||||| ||| ||||||| |||||  ||||| || || |||||||||| ||||    
T  17721 ggagaaagaagtgttcaagaacgtatcaaggaagcttctgaacagttaagaaaggaagaagaggagcctagtttgaagaaggctaagaagcctgtgtcaa 17622  T
Q  184 aggagataccttgtttcagagtcacgtctgaacaagaacaa 224  Q
     ||||| ||||||||| ||| ||||  |||| |||||||||    
T  17621 tggagacaccttgttttagaatcacacctgagcaagaacaa 17581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 390
Target Start/End: Complemental strand, 21860 - 21773
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    |||||||| ||||||||||||||||| | |||||||||||||||||| ||||| || || |||||| || ||||||||||||||||||    
T  21860 cagctcaaggcagcagggtatgagcttgctcctgagaaagctgctgtcattgcttccttggctgctaaactggaagaggaaactgtca 21773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 390
Target Start/End: Complemental strand, 16773 - 16686
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    |||||||| |||||| |||||||||| | |||||||||||||||||| ||||| || || |||||| || ||||||||||||||||||    
T  16773 cagctcaaggcagcatggtatgagcttgctcctgagaaagctgctgtcattgcttccttggctgctaaactggaagaggaaactgtca 16686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 16978 - 16941
Alignment:
Q  98 tcaggagcgcatcaaggaagctgctgaacagctaagaa 135  Q
    |||||||||||| |||||||||||||||||||||||||    
T  16978 tcaggagcgcatgaaggaagctgctgaacagctaagaa 16941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 22065 - 22028
Alignment:
Q  98 tcaggagcgcatcaaggaagctgctgaacagctaagaa 135  Q
    |||||||||||| |||||||||||||||||||||||||    
T  22065 tcaggagcgcatgaaggaagctgctgaacagctaagaa 22028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 3373 - 3449
Alignment:
Q  72 aaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagagga 148  Q
    ||||||| ||||||||||||||| ||||||||||| || || |||||||||||||||||||||| ||| ||||||||    
T  3373 aaaagagcaaagggagagagaagcgttcaggagcgtatgaaagaagctgctgaacagctaagaacagagaaagagga 3449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 161
Target Start/End: Complemental strand, 339 - 220
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||||||||||  |  | | |||  |||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||| ||||     
T  339 agggaagctgctcttcaagctatcagaagcagacgagctaaggaagaaagaagtgttcaggagcgtatcaaggaagctgctgaacagttaagaagagaag 240  T
Q  142 aagaggatcctagcctgaag 161  Q
    ||||| | ||||| ||||||    
T  239 aagagaagcctagtctgaag 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 153 - 88
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaa 371  Q
    |||||||||||||||||| | |||||| |||||||||||||||| ||||| ||| |||||||||||    
T  153 ctcaaagcagcagggtattatctggatgctgagaaagctgctgtgattgcttctctagctgctgaa 88  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 81 - 178
Target Start/End: Complemental strand, 3835619 - 3835522
Alignment:
Q  81 aagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgt 178  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||| ||||||  ||| ||||||| |||||  ||||| || || ||||||||||    
T  3835619 aagggagaaagaagtgtttaggagcgtatcaaggaagctgctgaacagttaagaagggaagaagaggagcctagtttgaagaaggctaagaagcctgt 3835522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 371
Target Start/End: Complemental strand, 3835397 - 3835329
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaa 371  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||  ||||| ||| |||||||||||    
T  3835397 cagctcaaagcagcagggtttgatctggatgctgagaaagctgctgagattgcttctctagctgctgaa 3835329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 23373457 - 23373389
Alignment:
Q  72 aaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaa 140  Q
    |||||||  |||||||| ||||||||||| ||| | |||||||||||||||||| || |||||| ||||    
T  23373457 aaaagagctaagggagaaagaagtgttcaagagtgtatcaaggaagctgctgaatagttaagaagagaa 23373389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 21518573 - 21518678
Alignment:
Q  30 gatgccaccaaaagggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagc 129  Q
    ||||| |||| |||||||||||||||  | || ||||  |  ||||||| ||||||||||||||| ||||||||||| || || ||||||||||||||||    
T  21518573 gatgctaccagaagggaagctgctcttgatgcaatcagaagcaaaagagcaaagggagagagaagcgttcaggagcgtatgaaagaagctgctgaacagc 21518672  T
Q  130 taagaa 135  Q
    | ||||    
T  21518673 tcagaa 21518678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 19475704 - 19475788
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    ||||| || ||||| |||||||| |||||||||||||| | ||| |||||  |||||||||||||||| ||||| ||||||||||    
T  19475704 ctcaaggctgcaggttatgagcttgatcctgagaaagcagttgtaattgctactttagctgctgaattagaagaagaaactgtca 19475788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 303 - 401
Target Start/End: Complemental strand, 17449224 - 17449126
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtcagtgaacgagca 401  Q
    |||||||| ||||||||||||||||| | ||||||||||| ||| |  ||||| || || ||||||||| | |||||||||||||| || ||| |||||    
T  17449224 cagctcaaggcagcagggtatgagcttgctcctgagaaagttgcagaaattgcttccttggctgctgaacttgaagaggaaactgttagggaaggagca 17449126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 21417084 - 21417030
Alignment:
Q  81 aagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaa 135  Q
    |||||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  21417084 aagggagaaagaagtgttcaggagcgtatcaaggaagctgctaaacagttaagaa 21417030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 303 - 371
Target Start/End: Complemental strand, 21416862 - 21416794
Alignment:
Q  303 cagctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaa 371  Q
    ||||||||||||||||||||| | |||||| || ||||||||| ||| ||||| ||| |||||||||||    
T  21416862 cagctcaaagcagcagggtataatctggatgctaagaaagctgttgtgattgcttctctagctgctgaa 21416794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 17449342 - 17449271
Alignment:
Q  185 ggagataccttgtttcagagtcacgtctgaacaagaacaagaggccagagaaattgctgctactgagatagc 256  Q
    |||||| |||||||||||| ||||  |||||||||| |||||||| || ||  |||||||||||||||||||    
T  17449342 ggagatgccttgtttcagactcactcctgaacaagagcaagaggctagggattttgctgctactgagatagc 17449271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 17449452 - 17449392
Alignment:
Q  75 agaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaa 135  Q
    |||| ||||||||||||||| ||||||||||| || || ||||||| ||||||||| ||||    
T  17449452 agagcaaagggagagagaagcgttcaggagcgtatgaaagaagctgttgaacagctcagaa 17449392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 34060075 - 34060135
Alignment:
Q  75 agaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaa 135  Q
    |||| ||| ||||||||||| ||||||||||| || || ||||||||||||| ||| ||||    
T  34060075 agagcaaaaggagagagaagcgttcaggagcgtatgaaagaagctgctgaactgctcagaa 34060135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 4665 - 4756
Alignment:
Q  44 ggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaa 135  Q
    |||||||||||| |||||||||   |  | |||||  |||||||| |||||||||||||| || ||||||||||||||||||||| ||||||    
T  4665 ggaagctgctcttcaagctatcggaagcagaagagccaagggagaaagaagtgttcaggaacgaatcaaggaagctgctgaacagttaagaa 4756  T

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Target: scaffold0201 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 1267 - 1161
Alignment:
Q  45 gaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaag 144  Q
    |||| |||||| ||| | |||| |||||| ||||  || ||||| ||||||||||||||||| || ||||||||||||||||| || ||| ||||| |||    
T  1267 gaagttgctcttcaaaccatcaggaataagagagctaaaggagaaagaagtgttcaggagcgtatgaaggaagctgctgaacaactcagagaagaagaag 1168  T
Q  145 aggatcc 151  Q
    | |||||    
T  1167 aagatcc 1161  T

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Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 151
Target Start/End: Complemental strand, 130515 - 130406
Alignment:
Q  42 agggaagctgctctacaagctatcaagaataaaagaggaaagggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaa 141  Q
    |||||||||||||| ||| ||||||  || |||||||  || ||||| ||||||||||||||| | || ||||||||||||| |||  | ||||| |||     
T  130515 agggaagctgctcttcaatctatcagaaacaaaagagctaaaggagaaagaagtgttcaggagtgtatgaaggaagctgctgcacaattgagaaatgaag 130416  T
Q  142 aagaggatcc 151  Q
    ||||||||||    
T  130415 aagaggatcc 130406  T

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Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 208
Target Start/End: Complemental strand, 22869 - 22745
Alignment:
Q  84 ggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagaggatcctagcctgaaggagactcagaagcctgtatcaa 183  Q
    ||||| ||||||||||| || || |||||||||||| ||||||||  || ||  ||| ||||||| | |||  ||||| || || |||||||||| | ||    
T  22869 ggagaaagaagtgttcaagaacgtatcaaggaagctcctgaacagtcaaaaagggaagaagaggagcttagtttgaagaaggctaagaagcctgtgtaaa 22770  T
Q  184 aggagataccttgtttcagagtcac 208  Q
     ||||| ||||||||| ||||||||    
T  22769 tggagacaccttgttttagagtcac 22745  T

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Target: scaffold0670 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 1624 - 1688
Alignment:
Q  84 ggagagagaagtgttcaggagcgcatcaaggaagctgctgaacagctaagaaaagaaaaagagga 148  Q
    ||||| ||||||||||| || || ||||||||||||||||||||| |||||| |||| |||||||    
T  1624 ggagaaagaagtgttcaagaacgtatcaaggaagctgctgaacagttaagaagagaagaagagga 1688  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 194615 - 194531
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtca 390  Q
    ||||| ||||| ||||||||||| | ||||||||| |||||||| |||||  ||||| |||||||||| ||||| |||| |||||    
T  194615 ctcaaggcagctgggtatgagcttgctcctgagaaggctgctgtgattgctactttaactgctgaattagaagaagaaaatgtca 194531  T

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Target: scaffold1465 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1465
Description:

Target: scaffold1465; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 129 - 46
Alignment:
Q  306 ctcaaagcagcagggtatgagctggatcctgagaaagctgctgttattgcctctttagctgctgaattggaagaggaaactgtc 389  Q
    ||||| || |||||||||||||| | |||| |||| |||||||  || ||  ||||||||||||| || |||||||||||||||    
T  129 ctcaaggctgcagggtatgagcttgctccttagaaggctgctgagatggctgctttagctgctgagttagaagaggaaactgtc 46  T

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