View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12521_low_21 (Length: 360)
Name: NF12521_low_21
Description: NF12521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12521_low_21 |
 | |
|
| [»] chr7 (32 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 32)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 16 - 360
Target Start/End: Original strand, 27830996 - 27831340
Alignment:
| Q |
16 |
gaagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacact |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27830996 |
gaagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaacctaatgtgagaaggcaaaaaggacactctctttttctgttgacact |
27831095 |
T |
|
| Q |
116 |
actattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgta |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27831096 |
actattgagatagatgccttatttgagggcattgacttcttttcaatgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgta |
27831195 |
T |
|
| Q |
216 |
tggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
27831196 |
tggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttcaaggattcccaaagtgca |
27831295 |
T |
|
| Q |
316 |
gcagctattggcggactttttcaagggaaaggatctgtgcaagag |
360 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
27831296 |
gcagctattggcggactttttcaagggaaaggatttgtgcaagag |
27831340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 94 - 356
Target Start/End: Complemental strand, 6789481 - 6789219
Alignment:
| Q |
94 |
actctctttttctgttgacactactattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaat |
193 |
Q |
| |
|
|||||||||| ||| | ||||||||||||| |||| | |||||| |||||| |||||| ||||| | | ||||| || |||||||||||||||||| |
|
|
| T |
6789481 |
actctcttttgttgtcgtcactactattgaggtagactctttatttcagggcatcgacttcatttcatcacttactcgggccaagtttgaggaaatcaat |
6789382 |
T |
|
| Q |
194 |
atggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggct |
293 |
Q |
| |
|
||||| |||| ||||| |||||| |||| |||||||||||||| |||| |||||||||||||||||| | || |||||||||||||||||||||| | |
|
|
| T |
6789381 |
atggatatttttaatgagtgtatgaagaccgttgagagttgtcttgttgacgctaagatggacaagagtattgtaaatgatgttgtccttgttggtgggt |
6789282 |
T |
|
| Q |
294 |
cttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatctgtgca |
356 |
Q |
| |
|
||||||| |||||||||||||| || |||||| || |||||| |||||||||| |||||| |
|
|
| T |
6789281 |
cttctagaattcccaaagtgcaacaactattgcaagaagttttcatgggaaaggatttgtgca |
6789219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 112 - 359
Target Start/End: Complemental strand, 8616632 - 8616385
Alignment:
| Q |
112 |
cactactattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaa |
211 |
Q |
| |
|
||||||||||||||| ||| |||| |||||||| || |||| |||| | |||||||||| ||||||||||||||||||||||||||||| || || |
|
|
| T |
8616632 |
cactactattgagattgattatttatgtgagggcatcgatttctcttcatcaatcactcgtgttaagtttgaggaaatcaatatggacctttttaacgag |
8616533 |
T |
|
| Q |
212 |
tgtatggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaag |
311 |
Q |
| |
|
||||| ||||||||||||||||| | | ||| |||||||| || ||||||||| |||||||| |||| ||||| |||||||| ||||||||||| |||| |
|
|
| T |
8616532 |
tgtataaagactgttgagagttgttttaatgattctaagatagagaagagtagtgtagatgatattgttcttgtcggtggctcgtctaggattcctaaag |
8616433 |
T |
|
| Q |
312 |
tgcagcagctattggcggactttttcaagggaaaggatctgtgcaaga |
359 |
Q |
| |
|
||||| | |||||| ||||||||| | || |||||| ||||||||| |
|
|
| T |
8616432 |
tgcaggaactattgagtgactttttcgatgggaaggatttgtgcaaga |
8616385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 348
Target Start/End: Complemental strand, 17267838 - 17267654
Alignment:
| Q |
164 |
atcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagta |
263 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||| |||||||| ||||| | ||| ||||||| |||||||| | |
|
|
| T |
17267838 |
atcactcgtgccaagtttgaggaaatcaatatggacctttttgatgagtgcatggagattgttgagaagtgtcttagtgatgctaagattgacaagagca |
17267739 |
T |
|
| Q |
264 |
gtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaagga |
348 |
Q |
| |
|
| | ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| | |||| |||||||| ||||| |
|
|
| T |
17267738 |
gagttgatgatgttgtccttgttggtgggtcttctaggattccgaaagtgcagcaactattgcagaacttcttcaaggggaagga |
17267654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 348
Target Start/End: Complemental strand, 17260277 - 17259956
Alignment:
| Q |
27 |
tggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagat |
126 |
Q |
| |
|
||||||||| ||||||||||| |||||| |||||| ||||||| ||| || || |||||||||||||| |||||| | || || | | ||||| | |
|
|
| T |
17260277 |
tggacattattgggaacccaaaagccttaaggaggttgagaactgcatgtgaaaaagcaaaaaggacactttcttttgcctctgtgaccaatgttgaggt |
17260178 |
T |
|
| Q |
127 |
agatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgtt |
226 |
Q |
| |
|
||| || |||||| |||| | | || | ||| | ||||||||||| |||||||| |||||||||||||||||||| |||| || ||||||| |||| |
|
|
| T |
17260177 |
agacgctttatttaagggtgttaatttttcttcgtcaatcactcgtgccaagtttgaagaaatcaatatggaccttttttatgagtgcatggagattgtt |
17260078 |
T |
|
| Q |
227 |
gagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattgg |
326 |
Q |
| |
|
|||| ||||| | ||| |||||| |||||||| || || ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| |
|
|
| T |
17260077 |
gagaagtgtcttagtgatggtaagattgacaagagcagaattgatgatgttgtccttgttggtggatcttctaggattccgaaagtgcagcaactattgc |
17259978 |
T |
|
| Q |
327 |
cggactttttcaagggaaagga |
348 |
Q |
| |
|
||| || |||||||| ||||| |
|
|
| T |
17259977 |
aggatttcttcaagggtaagga |
17259956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 347
Target Start/End: Complemental strand, 8654497 - 8654166
Alignment:
| Q |
16 |
gaagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacact |
115 |
Q |
| |
|
|||||| | |||||| ||||| || ||||||| | |||| |||||| ||||||| || |||| ||||||||||| |||||||||| || ||| ||| |
|
|
| T |
8654497 |
gaagaataaagtggaaattagcggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttttacttttgtcacc |
8654398 |
T |
|
| Q |
116 |
actattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgta |
215 |
Q |
| |
|
||| ||||| ||||||| |||||| ||| | ||||| | |||| | ||||||||||| || ||||||||||| ||||||||| |||||||||| |||| |
|
|
| T |
8654397 |
actgttgaggtagatgctttatttatgggaatcgacttttcttcatcaatcactcgtgctaaatttgaggaaattaatatggactttttcaatgagtgta |
8654298 |
T |
|
| Q |
216 |
tggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
315 |
Q |
| |
|
| | | |||||| |||||||||| || || ||||| |||||| | ||| ||||||||||| || || |||||||| |||||||||||||||||||| |
|
|
| T |
8654297 |
tcaatattgttgacagttgtctcagagattcaaagatatacaagaatgatattgatgatgttgtactcgtgggtggctcgtctaggattcccaaagtgca |
8654198 |
T |
|
| Q |
316 |
gcagctattggcggactttttcaagggaaagg |
347 |
Q |
| |
|
| | |||||| || ||||||||||| |||| |
|
|
| T |
8654197 |
ggatctattgctagagtttttcaaggggaagg |
8654166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 312
Target Start/End: Complemental strand, 8646914 - 8646628
Alignment:
| Q |
26 |
gtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgaga |
125 |
Q |
| |
|
|||||||||| ||| ||| |||||||||| |||||| ||||||| |||||||| |||||||||||||| |||||| || | ||| || ||||| |
|
|
| T |
8646914 |
gtggacattactggaaactcaagagccttaaggaggttgagaacggcatgcgagagagcaaaaaggacactatcttttgcttcttgcaccaccattgaat |
8646815 |
T |
|
| Q |
126 |
tagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgt |
225 |
Q |
| |
|
||||| | |||||| | |||| |||||| ||||| | ||||||||||| || ||||| | |||||||||||| || |||| |||||| |||| ||||| |
|
|
| T |
8646814 |
tagattctttatttaatggcattgactttatttcatcaatcactcgtgccaaatttgacgcaatcaatatggatctgttcatcgaatgtttggaaactgt |
8646715 |
T |
|
| Q |
226 |
tgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagt |
312 |
Q |
| |
|
||||||||||| | ||| | ||||||||||||||| ||| |||||||||| |||||||||||||| ||||| ||||| ||||| |
|
|
| T |
8646714 |
tgagagttgtcataatgatgccaagatggacaagagttctatccatgatgttgttcttgttggtggctcctctagaattccaaaagt |
8646628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 26 - 348
Target Start/End: Original strand, 10494505 - 10494827
Alignment:
| Q |
26 |
gtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgaga |
125 |
Q |
| |
|
|||||||| |||||||| |||| | |||| |||||| ||||||| || |||| ||||||||||| ||||||||||||| ||| ||| || ||||| |
|
|
| T |
10494505 |
gtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgagg |
10494604 |
T |
|
| Q |
126 |
tagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgt |
225 |
Q |
| |
|
| ||||| |||||| ||| | ||||| | |||| | ||||||||||| || ||||||||||| ||||| ||| |||||| || |||||| | | ||| |
|
|
| T |
10494605 |
tcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgt |
10494704 |
T |
|
| Q |
226 |
tgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattg |
325 |
Q |
| |
|
||| |||||||||| || || ||||| |||||| | ||| |||||| |||| ||||| |||||||| ||||||||||||||||||||| | |||||| |
|
|
| T |
10494705 |
tgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattg |
10494804 |
T |
|
| Q |
326 |
gcggactttttcaagggaaagga |
348 |
Q |
| |
|
|| ||||||||||| ||||| |
|
|
| T |
10494805 |
ctagaatttttcaaggggaagga |
10494827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 119 - 325
Target Start/End: Complemental strand, 3147208 - 3147002
Alignment:
| Q |
119 |
attgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatgg |
218 |
Q |
| |
|
|||||||||||| | |||||| |||| |||||| |||||| | ||||||||||| ||||||||||||||||||||||| ||||||| ||| ||| ||| |
|
|
| T |
3147208 |
attgagatagattctttatttcagggatttgacttattttcatcaatcactcgtgccaagtttgaggaaatcaatatggatcttttcactgagtgtttgg |
3147109 |
T |
|
| Q |
219 |
agactgttgagagttgtctcactga-ctctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagc |
317 |
Q |
| |
|
| |||||| |||||||| || |||| || || |||||||| ||| |||| ||||||| |||||||| |||||||| ||||| ||||| |||||||| | |
|
|
| T |
3147108 |
aaactgttaagagttgtttcgctgatgtcgaa-atggacaaaagtgctatacatgatgtcgtccttgtcggtggctcgtctagaattccaaaagtgcaac |
3147010 |
T |
|
| Q |
318 |
agctattg |
325 |
Q |
| |
|
| |||||| |
|
|
| T |
3147009 |
aactattg |
3147002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 315
Target Start/End: Complemental strand, 8659410 - 8659111
Alignment:
| Q |
16 |
gaagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacact |
115 |
Q |
| |
|
|||||| | ||||||||||||||| ||||||| | |||| |||||| ||||||| || |||| |||||| ||||||||||||||| || ||| ||| |
|
|
| T |
8659410 |
gaagaataaagtggacattagtggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcacc |
8659311 |
T |
|
| Q |
116 |
actattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgta |
215 |
Q |
| |
|
||| ||||| | ||| | |||||| |||| | ||||||| |||| ||||||||||| | |||||||||||| |||||||| ||||| ||||| |||| |
|
|
| T |
8659310 |
actgttgaggtcgattctttatttcagggaatagacttctgttcattaatcactcgtgccaggtttgaggaaatgaatatggatctttttaatgagtgta |
8659211 |
T |
|
| Q |
216 |
tggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
315 |
Q |
| |
|
|| | ||||||||||||||||| | || || || || | | |||| ||| || ||| |||| ||||| ||||| || |||||||||||||||||||| |
|
|
| T |
8659210 |
tgaaaactgttgagagttgtcttagcgattcaaaaatacagatgagtgatattgacgatattgttcttgtgggtggttcgtctaggattcccaaagtgca |
8659111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 325
Target Start/End: Original strand, 8585851 - 8586136
Alignment:
| Q |
40 |
gaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttattt |
139 |
Q |
| |
|
|||||||||||| |||||| || | ||||| ||| || ||||||||||||||||| ||||| | | |||||||||||| || ||| |||| | |
|
|
| T |
8585851 |
gaacccaagagctttgaggcggttaagaacggcatgtgaaaaggcaaaaaggacactttctttcaaattggtcactactattgaaattgattatttatgt |
8585950 |
T |
|
| Q |
140 |
gagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctca |
239 |
Q |
| |
|
|||||| || |||| |||| | ||||| |||| ||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||| | |
|
|
| T |
8585951 |
gagggcgtcgatttctcttcatcaatcacgcgtgtcaagtttgaggaaatcaatatggacctttttaatgagtgtataaatactgttgagagttgtctta |
8586050 |
T |
|
| Q |
240 |
ctgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattg |
325 |
Q |
| |
|
| || |||||||| || |||| | || |||| ||| |||||||||| |||||||| || || ||||||||||| ||| | |||||| |
|
|
| T |
8586051 |
ccgattctaagatagagaagaatggtgtagacgatattgtccttgtcggtggctcgtccagaattcccaaagtacaggaactattg |
8586136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 167 - 356
Target Start/End: Original strand, 29582113 - 29582302
Alignment:
| Q |
167 |
actcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagtagta |
266 |
Q |
| |
|
||||| || ||||||||| ||||||| || ||||| || | |||||||||||| ||||| ||||||||| ||| |||| |||| |||||||||| |
|
|
| T |
29582113 |
actcgggccaagtttgagcaaatcaacatcgacctctttgaaaaatgtatggagattgttgggagttgtctacgtgatgctaacatggtcaagagtagtg |
29582212 |
T |
|
| Q |
267 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatctgtgca |
356 |
Q |
| |
|
|||||||| | |||||| |||||||||||||||| |||||||||||||| ||||||||| || ||||||||||| |||||| |||||| |
|
|
| T |
29582213 |
tagatgatatcgtccttattggtggctcttctagaattcccaaagtgcatcagctattgcaagaatttttcaaggggaaggatttgtgca |
29582302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 119 - 315
Target Start/End: Complemental strand, 8601918 - 8601722
Alignment:
| Q |
119 |
attgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatgg |
218 |
Q |
| |
|
||||| |||||| ||||||||||||| | ||| ||| |||| | |||||||| || ||||||||| || ||||| ||||||| || || | ||||| | |
|
|
| T |
8601918 |
attgacatagattccttatttgagggtattgatttccattcatcaatcactcgggccaagtttgagcaactcaatgtggacctctttaagaagtgtatag |
8601819 |
T |
|
| Q |
219 |
agactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
315 |
Q |
| |
|
|||||||||| |||||||| | ||| || |||| || ||||||||| | ||||||| |||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
8601818 |
agactgttgaaagttgtcttagtgatgctcagatcgaaaagagtagtgtggatgatgctgtccttgttggcggttcttctaggattcccaaagtgca |
8601722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 165 - 325
Target Start/End: Original strand, 8383146 - 8383306
Alignment:
| Q |
165 |
tcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagtag |
264 |
Q |
| |
|
||||||| || || |||||| || ||||||||||||| || | | |||||||||||||||||||| ||||| ||||| |||||||| |||||||||| |
|
|
| T |
8383146 |
tcactcgggccaaatttgagcaactcaatatggacctatttgaaaagtgtatggagactgttgagagctgtcttactgatgctaagatgaacaagagtag |
8383245 |
T |
|
| Q |
265 |
tatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattg |
325 |
Q |
| |
|
| ||||||||||||| || | ||||| ||||| ||||||||||||||||| |||||||| |
|
|
| T |
8383246 |
tgtagatgatgttgttctcatcggtggttcttcgaggattcccaaagtgcaagagctattg |
8383306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 176 - 324
Target Start/End: Complemental strand, 8570198 - 8570050
Alignment:
| Q |
176 |
aagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatg |
275 |
Q |
| |
|
|||||||||||||| |||||| |||| || | | |||||||| |||||| | |||||||| |||| |||||||||| |||| |||| ||||||||| |
|
|
| T |
8570198 |
aagtttgaggaaatgaatatgaacctctttgaaaagtgtatggaaactgttaatagttgtcttgctgatgctaagatggaaaagaatagtgtagatgatg |
8570099 |
T |
|
| Q |
276 |
ttgtccttgttggtggctcttctaggattcccaaagtgcagcagctatt |
324 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||| ||||||||| |
|
|
| T |
8570098 |
ttgtccttgttggtggttcttctaggattcctaaagtgaggcagctatt |
8570050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 228 - 349
Target Start/End: Original strand, 7878066 - 7878187
Alignment:
| Q |
228 |
agagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggc |
327 |
Q |
| |
|
|||||||||| ||||| ||| ||||||||||| | | ||||||||||||| ||||||||||| || |||||||||| ||||||||||||||||||| |
|
|
| T |
7878066 |
agagttgtcttactgatgctatgatggacaagaacaatgtagatgatgttgtacttgttggtggatcatctaggattctcaaagtgcagcagctattgca |
7878165 |
T |
|
| Q |
328 |
ggactttttcaagggaaaggat |
349 |
Q |
| |
|
||||||||| ||||| |||||| |
|
|
| T |
7878166 |
ggacttttttaaggggaaggat |
7878187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 246 - 351
Target Start/End: Complemental strand, 8590455 - 8590350
Alignment:
| Q |
246 |
ctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaa |
345 |
Q |
| |
|
||||||||||||||| | | ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||| || |
|
|
| T |
8590455 |
ctaagatggacaagaacattgtagatgatgttgtacttgttggtggttcttctaggattcccaaagtgcagcagctattgcaagacttttttatggggaa |
8590356 |
T |
|
| Q |
346 |
ggatct |
351 |
Q |
| |
|
|||||| |
|
|
| T |
8590355 |
ggatct |
8590350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 316
Target Start/End: Complemental strand, 8537935 - 8537783
Alignment:
| Q |
164 |
atcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagta |
263 |
Q |
| |
|
|||||||| || ||||||||| || |||| |||||||| || | | |||||| | |||||| |||||||| | | ||| |||||||||||| |||| |
|
|
| T |
8537935 |
atcactcgggccaagtttgagcaactcaacatggacctctttgaaaagtgtatgaaaactgttaagagttgttttaatgatgctaagatggacagtagta |
8537836 |
T |
|
| Q |
264 |
gtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcag |
316 |
Q |
| |
|
|||| ||||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
8537835 |
gtatggatgatgttgtactagttggtggctcttctaggattcccaaagtgcag |
8537783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 316
Target Start/End: Complemental strand, 8667466 - 8667166
Alignment:
| Q |
16 |
gaagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacact |
115 |
Q |
| |
|
|||||| | ||||||||| ||| |||||||| | |||| |||||| ||||||| || |||| ||||||||||| |||||||||| || ||| || |
|
|
| T |
8667466 |
gaagaataaagtggacatcagtcagaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttttgcttttgttacc |
8667367 |
T |
|
| Q |
116 |
actattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgta |
215 |
Q |
| |
|
||| ||||| ||||||| |||||| ||| | ||||| | |||| | || |||||||| || ||||||||| | || |||||| |||||||||| |||| |
|
|
| T |
8667366 |
actgttgaggtagatgctttatttacgggaatcgacttttgttcatcaattactcgtgctaaatttgaggaacttaacatggactttttcaatgagtgta |
8667267 |
T |
|
| Q |
216 |
tggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
315 |
Q |
| |
|
|| | | ||||| | ||||||| || || ||||| |||||| | ||| ||||||||||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
8667266 |
tgaatatagttgacacctgtctcagggattcaaagatatacaagaatgatattgatgatgttgtacttgtcggtggctcgtctaggattcccaaagtgca |
8667167 |
T |
|
| Q |
316 |
g |
316 |
Q |
| |
|
| |
|
|
| T |
8667166 |
g |
8667166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 176 - 313
Target Start/End: Complemental strand, 8576213 - 8576076
Alignment:
| Q |
176 |
aagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatg |
275 |
Q |
| |
|
|||||||||||||| |||||| |||| || | | |||||| | |||||| | | |||||| |||| ||||||||||||||| |||| ||||||||| |
|
|
| T |
8576213 |
aagtttgaggaaatgaatatgaacctctttgaaaagtgtatgaatactgttaatatttgtcttgctgatgctaagatggacaagaatagtgtagatgatg |
8576114 |
T |
|
| Q |
276 |
ttgtccttgttggtggctcttctaggattcccaaagtg |
313 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
8576113 |
ttgtccttgttggtggttcttctaggattcctaaagtg |
8576076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 315
Target Start/End: Complemental strand, 1301507 - 1301208
Alignment:
| Q |
16 |
gaagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacact |
115 |
Q |
| |
|
|||||| | ||||||||||||||| |||| | | |||| |||||| |||||| || |||| |||||||||||||||||||||| || | | ||| |
|
|
| T |
1301507 |
gaagaataaagtggacattagtggtaaccagaaatccttaaggaggttgagaattgcgtgtgagagggcaaaaaggacactctcttttgctttagtcacc |
1301408 |
T |
|
| Q |
116 |
actattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgta |
215 |
Q |
| |
|
|| ||||| | ||| | |||||| |||| | ||||||| |||| ||||||||||| |||||||||||||| |||||||| ||||| ||||| |||| |
|
|
| T |
1301407 |
accgttgaggtcgattctttatttcagggaatcgacttctgttcattaatcactcgtgccaagtttgaggaaattaatatggatctttttaatgagtgta |
1301308 |
T |
|
| Q |
216 |
tggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
315 |
Q |
| |
|
| || |||||||||||||| | || || || || || |||| ||| |||||| |||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
1301307 |
caaaaaccgttgagagttgtcttagcgattcaaaaatatgcatgagtgatatcgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgca |
1301208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 167 - 313
Target Start/End: Complemental strand, 8581596 - 8581450
Alignment:
| Q |
167 |
actcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagtagta |
266 |
Q |
| |
|
||||| || ||||||||| |||| |||||| |||| || | | |||||||| |||||| | |||||||| | || |||||||||||| | ||||| |
|
|
| T |
8581596 |
actcgggccaagtttgagcaaatgaatatgaacctctttgaaaagtgtatggacactgttaatagttgtcttgccgatgctaagatggacaggggtagtg |
8581497 |
T |
|
| Q |
267 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtg |
313 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
8581496 |
tagatgatgttgtccttgttggtggttcttctaggattcctaaagtg |
8581450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 313
Target Start/End: Complemental strand, 8545532 - 8545383
Alignment:
| Q |
164 |
atcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagta |
263 |
Q |
| |
|
|||||||| || ||||||||| || | ||||||||||| || | | |||||||| |||||| | ||||||| ||| |||||||||||||| ||| |
|
|
| T |
8545532 |
atcactcgggccaagtttgagcaattgaatatggacctctttgaaaagtgtatggacactgttaattgttgtcttgttgatgctaagatggacaagggta |
8545433 |
T |
|
| Q |
264 |
gtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtg |
313 |
Q |
| |
|
|| |||||||||||||||||||||| || |||||||||||||| |||||| |
|
|
| T |
8545432 |
gtgtagatgatgttgtccttgttggcggttcttctaggattcctaaagtg |
8545383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 168 - 312
Target Start/End: Original strand, 8673894 - 8674038
Alignment:
| Q |
168 |
ctcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagtagtat |
267 |
Q |
| |
|
||||||| |||||||||||||||||||| | |||||||| || ||| |||| |||||||||| |||||| | ||| | |||||||||| ||| ||| |
|
|
| T |
8673894 |
ctcgtgccaagtttgaggaaatcaatatcaatcttttcaacgagtgtttggaaactgttgagaattgtcttattgatgccaagatggacataagttttat |
8673993 |
T |
|
| Q |
268 |
agatgatgttgtccttgttggtggctcttctaggattcccaaagt |
312 |
Q |
| |
|
|| |||||||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
8673994 |
ccattatgttgtccttgttggtggctcctctagaattccaaaagt |
8674038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 8609816 - 8609626
Alignment:
| Q |
164 |
atcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagta |
263 |
Q |
| |
|
||||||||||| ||||||||| || | || |||||||| || | | ||||||||||| ||||| || ||||| ||||| || | ||||| |||| | |
|
|
| T |
8609816 |
atcactcgtgcgaagtttgagcaacttaacatggacctctttgaaaagtgtatggagacggttgaaagatgtcttactgatgctgaaatggataagaaaa |
8609717 |
T |
|
| Q |
264 |
gtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatctgtg |
354 |
Q |
| |
|
||||||||||||| |||||||| || |||||||||||||| |||||| |||||||| || ||||||||||| ||||||||| |||| |
|
|
| T |
8609716 |
ccgtagatgatgttgttcttgttggaggttcttctaggattccgaaagtgaagcagctactgcaagactttttcaatggaaaggatttgtg |
8609626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 8636699 - 8636772
Alignment:
| Q |
251 |
atggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctatt |
324 |
Q |
| |
|
||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||| |
|
|
| T |
8636699 |
atggataagagcaatatagatgatgttgtccttgttggtggctcctctaggattccaaaggtgcagcaactatt |
8636772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 239
Target Start/End: Original strand, 13333596 - 13333800
Alignment:
| Q |
35 |
agtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgcct |
134 |
Q |
| |
|
||||||||||||| | |||| |||||| ||||||| || |||| || |||||||| |||||| |||||| ||| ||| ||| |||| ||||||| | |
|
|
| T |
13333596 |
agtgggaacccaaaatccttaaggaggttgagaactgcctgtgagagggaaaaaaggatactctccttttcttttgtcaccactgttgaagtagatgctt |
13333695 |
T |
|
| Q |
135 |
tatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttg |
234 |
Q |
| |
|
||||| ||| | ||||| | |||| | ||||||||||| || ||||||||||| ||||| ||| |||||| || |||||| | | |||||| ||||| |
|
|
| T |
13333696 |
tatttatgggaatcgacttttcttcatcaatcactcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgacagttg |
13333795 |
T |
|
| Q |
235 |
tctca |
239 |
Q |
| |
|
||||| |
|
|
| T |
13333796 |
tctca |
13333800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 312
Target Start/End: Complemental strand, 8664228 - 8664086
Alignment:
| Q |
168 |
ctcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgact-ctaagatggacaagagtagta |
266 |
Q |
| |
|
||||||| |||| ||| |||||||||||||| |||||||| | ||| |||| ||||||||||||||||| | | ||| | ||||||||| |||| || |
|
|
| T |
8664228 |
ctcgtgccaagtatgatgaaatcaatatggatcttttcaacg--tgtttggaaactgttgagagttgtctta-ttactgccgagatggacatgagtttta |
8664132 |
T |
|
| Q |
267 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagt |
312 |
Q |
| |
|
| || |||||||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
8664131 |
tccattatgttgtccttgttggtggctcctctagaattccgaaagt |
8664086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 8664956 - 8664919
Alignment:
| Q |
167 |
actcgtgcaaagtttgaggaaatcaatatggacctttt |
204 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
8664956 |
actcgtgcgaggtttgaggaaatcaatatggacctttt |
8664919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 8102460 - 8102412
Alignment:
| Q |
270 |
atgatgttgtccttgttggtggctcttctaggattcccaaagtgcagca |
318 |
Q |
| |
|
|||||||||| ||||||||||| || |||||||||||||||| ||||| |
|
|
| T |
8102460 |
atgatgttgttcttgttggtggttcaactaggattcccaaagttcagca |
8102412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 8545664 - 8545600
Alignment:
| Q |
32 |
attagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacact |
96 |
Q |
| |
|
|||||| |||||||| ||||||||||||| ||||||| || |||||||||||||||||||| |
|
|
| T |
8545664 |
attagtcggaacccagaagccttgaggaggttgagaactgcctgtgagaaggcaaaaaggacact |
8545600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 356
Target Start/End: Original strand, 29578053 - 29578133
Alignment:
| Q |
276 |
ttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatctgtgca |
356 |
Q |
| |
|
||||||||||||| || || ||||| ||||||||||||| | | |||||| |||||||||||||| | |||| |||||| |
|
|
| T |
29578053 |
ttgtccttgttggaggttcatctagaattcccaaagtgcggaaactattgcaagactttttcaagggtagggatttgtgca |
29578133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 325
Target Start/End: Complemental strand, 43744853 - 43744554
Alignment:
| Q |
26 |
gtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgaga |
125 |
Q |
| |
|
|||||||||| ||| ||||||||||| || |||||| ||||||| |||||| | |||||||||||| | |||||| |||||| ||| ||||||||| |
|
|
| T |
43744853 |
gtggacattactggaaacccaagagcattaaggaggttgagaacagcatgcgaaagagcaaaaaggacattatcttttgctgttgtcaccactattgagg |
43744754 |
T |
|
| Q |
126 |
tagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgt |
225 |
Q |
| |
|
||||| | ||||||||||||| ||| |||||| |||| ||||||||| | ||||||||||||||||||||||| || ||||| || ||| || | | ||| |
|
|
| T |
43744753 |
tagattctttatttgagggcattgatttctttacaacaatcactcgtactaagtttgaggaaatcaatatggatctcttcaacgagtgtttgaaaattgt |
43744654 |
T |
|
| Q |
226 |
tgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattg |
325 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||| |||| |||||||||| |||||||||||||| ||||||||||| ||||| || || |||||| |
|
|
| T |
43744653 |
tgagagttgtcttactgatgccaagatggacaagagcgctatacatgatgttgttcttgttggtggctcctctaggattccaaaagtacaacaactattg |
43744554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 114 - 348
Target Start/End: Complemental strand, 12528453 - 12528219
Alignment:
| Q |
114 |
ctactattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatg |
213 |
Q |
| |
|
|||| ||||| |||||||| ||| |||||||| |||||||| ||| | |||||||| || ||||| ||| || | ||||||||||| || | | || |
|
|
| T |
12528453 |
ctacaattgacatagatgctatatgtgagggcattgacttctgctcatcaatcactcgagccaagttcgagcaactgaatatggacctctttgaaaagtg |
12528354 |
T |
|
| Q |
214 |
tatggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtg |
313 |
Q |
| |
|
||||||||| ||||| |||||| | || || |||||||||||||||||||| |||||||| |||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
12528353 |
tatggagaccgttgaaagttgtttgaccgatgctaagatggacaagagtagtgtagatgatattgtacttgttggtggctcgtctaggattcccaaagtg |
12528254 |
T |
|
| Q |
314 |
cagcagctattggcggactttttcaagggaaagga |
348 |
Q |
| |
|
||||||||||| ||| ||||||||||| ||||| |
|
|
| T |
12528253 |
aagcagctattgcaggagtttttcaagggcaagga |
12528219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 26 - 349
Target Start/End: Original strand, 16657648 - 16657971
Alignment:
| Q |
26 |
gtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgaga |
125 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||| ||||||| ||| |||| |||||| ||||||||||||||| || ||| ||| ||| ||||| |
|
|
| T |
16657648 |
gtggacataagtgggaactcaagagccttgaggaggttgagaactgcatgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgagg |
16657747 |
T |
|
| Q |
126 |
tagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgt |
225 |
Q |
| |
|
||||| | |||||| |||| | |||||| | |||| | ||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||| | ||||| |
|
|
| T |
16657748 |
tagattctttatttcagggaattgacttttcttcatcaatcacccgtgccaagtttgaggaaattaatatggatcttttcaatgagtgtatgaaaactgt |
16657847 |
T |
|
| Q |
226 |
tgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattg |
325 |
Q |
| |
|
||||| |||||| ||| || |||||| ||| || ||| ||||| ||||| ||||| |||||||| ||||||||||||||||||||| | |||||| |
|
|
| T |
16657848 |
tgagaattgtcttcgtgattcaaagatgcacattggtgatattgatgacgttgttcttgtgggtggctcatctaggattcccaaagtgcaggatctattg |
16657947 |
T |
|
| Q |
326 |
gcggactttttcaagggaaaggat |
349 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
16657948 |
caagactttttcaagggcaaggat |
16657971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 116 - 360
Target Start/End: Original strand, 12258802 - 12259046
Alignment:
| Q |
116 |
actattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgta |
215 |
Q |
| |
|
||||||||||||||| | |||| ||| |||| ||| || | | || | |||| |||||| |||||||||||||| ||| |||| |||||||||||||| | |
|
|
| T |
12258802 |
actattgagatagattctttatgtgatggcattgatttttctgcatcaatcaatcgtgccaagtttgaggaaataaatttggaacttttcaatgaatgca |
12258901 |
T |
|
| Q |
216 |
tggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
315 |
Q |
| |
|
|| ||||||||||||||||||| || || |||| | ||||||||||| | ||||||||||||||||||| ||||| ||||||||||||| ||||||||| |
|
|
| T |
12258902 |
tgaagactgttgagagttgtcttacggatgctaacacggacaagagtaatgtagatgatgttgtccttgtaggtgggtcttctaggattctcaaagtgca |
12259001 |
T |
|
| Q |
316 |
gcagctattggcggactttttcaagggaaaggatctgtgcaagag |
360 |
Q |
| |
|
||||||||| ||| ||||||||||| || || |||||||||| |
|
|
| T |
12259002 |
gcagctattacaggattttttcaaggggaaagagttgtgcaagag |
12259046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 27 - 357
Target Start/End: Complemental strand, 14703444 - 14703114
Alignment:
| Q |
27 |
tggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagat |
126 |
Q |
| |
|
||||||||||||| || |||| |||||| ||||| |||||||| ||||||| ||||||||| ||||| ||||| |||| | | ||||||||| | |
|
|
| T |
14703444 |
tggacattagtggaaatccaaaagccttaaggagcttgagaaccgcttgcgagagggcaaaaagaacactttctttccaagttgtcgccactattgaggt |
14703345 |
T |
|
| Q |
127 |
agatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgtt |
226 |
Q |
| |
|
|||||| |||||| | ||| |||||| | |||| |||||| | | || |||||||| ||||| ||||||||| |||| ||||| ||| || ||| |||| |
|
|
| T |
14703344 |
agatgctttatttcaatgcattgacttttcttcatcgatcaatagggccaagtttgaagaaatgaatatggacttttttaatgagtgtgtgaagattgtt |
14703245 |
T |
|
| Q |
227 |
gagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattgg |
326 |
Q |
| |
|
||||||||||| | ||| ||||||||||||||||||| ||||||||||||| ||||| ||||| |||||| ||||||||||||| ||||| |||| |
|
|
| T |
14703244 |
gagagttgtcttattgatgctaagatggacaagagtagagtagatgatgttgttcttgtcggtgggtcttctcggattcccaaagtacagcaattattac |
14703145 |
T |
|
| Q |
327 |
cggactttttcaagggaaaggatctgtgcaa |
357 |
Q |
| |
|
|||||||||| |||| ||||| ||||||| |
|
|
| T |
14703144 |
aggactttttccaggggaaggagttgtgcaa |
14703114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 17 - 360
Target Start/End: Complemental strand, 12234735 - 12234392
Alignment:
| Q |
17 |
aagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacacta |
116 |
Q |
| |
|
||||||| ||||||||| ||||| || |||| ||||||||||||| | ||||| || |||| ||||||||| || | ||||| ||||| | | |
|
|
| T |
12234735 |
aagaaaaaagtggacatgagtggaaatccaaaagccttgaggaggttaagaactgcttgtgagagggcaaaaagatcattgtctttccttgttgttgcaa |
12234636 |
T |
|
| Q |
117 |
ctattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtat |
216 |
Q |
| |
|
| |||||| ||||| | |||||||| |||| ||| || | |||| |||||| | | || |||||||||||||| |||||||| ||| | | ||| ||||| |
|
|
| T |
12234635 |
ccattgaggtagattctttatttgaaggcattgatttttcttcatcgatcaatagggccaagtttgaggaaatgaatatggatcttcttattgagtgtat |
12234536 |
T |
|
| Q |
217 |
ggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcag |
316 |
Q |
| |
|
| ||| ||||||||||||||| | ||| ||||||||||||| ||||| | ||||| ||||||||| |||| || || ||||||||||||||||||||| |
|
|
| T |
12234535 |
gaagattgttgagagttgtcttagtgatgctaagatggacaaaagtagggtggatgaagttgtccttattggcgggtcctctaggattcccaaagtgcag |
12234436 |
T |
|
| Q |
317 |
cagctattggcggactttttcaagggaaaggatctgtgcaagag |
360 |
Q |
| |
|
|| |||||| ||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
12234435 |
caactattgcaggattttttcaaggggaaggagctgtgcaagag |
12234392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 25 - 360
Target Start/End: Complemental strand, 7542264 - 7541929
Alignment:
| Q |
25 |
agtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgag |
124 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||| ||||||| || |||| ||||||||| |||| ||||| ||||| | ||||||||| |
|
|
| T |
7542264 |
agtggacattagtgggaatccaaaagccttgaggaggttgagaactgcttgtgagagggcaaaaagatcactttctttccttgttgttgccactattgag |
7542165 |
T |
|
| Q |
125 |
atagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactg |
224 |
Q |
| |
|
||||| | |||||| | |||| |||||| | |||| |||||| | | || ||||||||||| || |||||||| ||||| || || |||||| || || |
|
|
| T |
7542164 |
gtagattctttatttcaaggcattgacttttcttcatcgatcaatagggccaagtttgaggagatgaatatggatctttttaacgagtgtatgacgattg |
7542065 |
T |
|
| Q |
225 |
ttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctatt |
324 |
Q |
| |
|
||| || ||||| | ||| |||| ||||||||||| | |||||||||||||||||||| || || ||||| |||||||||| ||| || |||||||| |
|
|
| T |
7542064 |
ttggaagctgtcttattgatgctaatatggacaagagcatgatagatgatgttgtccttgtcggcgggtcttcgaggattcccatagtacatcagctatt |
7541965 |
T |
|
| Q |
325 |
ggcggactttttcaagggaaaggatctgtgcaagag |
360 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| |
|
|
| T |
7541964 |
aaaggactttttcaatggaaaggacttgtgcaagag |
7541929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 116 - 360
Target Start/End: Original strand, 12245627 - 12245871
Alignment:
| Q |
116 |
actattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgta |
215 |
Q |
| |
|
||||||||| ||||| | |||||| | |||| ||| || | |||| | |||| ||| ||||||||||||||| | ||| | || ||| | ||||| |||| |
|
|
| T |
12245627 |
actattgaggtagattctttatttcaaggcattgatttttcttcatccatcaatcgggcaaagtttgaggaattgaatttagatcttcttaatgattgta |
12245726 |
T |
|
| Q |
216 |
tggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
315 |
Q |
| |
|
| ||||||||||||||||| | | || | |||||||||||||||| |||||||||| |||| ||||||||||| |||||||||||||||||||| || |
|
|
| T |
12245727 |
taaagactgttgagagttgtattatggatgcaaagatggacaagagtactatagatgattttgtacttgttggtggatcttctaggattcccaaagtcca |
12245826 |
T |
|
| Q |
316 |
gcagctattggcggactttttcaagggaaaggatctgtgcaagag |
360 |
Q |
| |
|
|||||||| |||||||||||| || ||||| |||||||||| |
|
|
| T |
12245827 |
acagctattacaggactttttcaacgggaaggaattgtgcaagag |
12245871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 116 - 360
Target Start/End: Complemental strand, 11999354 - 11999111
Alignment:
| Q |
116 |
actattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgta |
215 |
Q |
| |
|
||||||||| ||||| | |||||| | |||| ||| || | |||| | |||| ||| ||||||||||||||| | ||| | || ||| | ||||| |||| |
|
|
| T |
11999354 |
actattgaggtagattctttatttcaaggcattgatttttcttcatccatcaatcgggcaaagtttgaggaattgaatttagatcttcttaatgattgta |
11999255 |
T |
|
| Q |
216 |
tggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
315 |
Q |
| |
|
| ||||||||||||||||| | | || | |||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||| || |
|
|
| T |
11999254 |
taaagactgttgagagttgtattatggatgcaaagatggacaagagtactatagatgatgttgtacttgttggtggatcttctagga-tcccaaagtcca |
11999156 |
T |
|
| Q |
316 |
gcagctattggcggactttttcaagggaaaggatctgtgcaagag |
360 |
Q |
| |
|
|||||||| ||||||||||| || ||||| |||||||||| |
|
|
| T |
11999155 |
acagctattacatgactttttcaacgggaaggagttgtgcaagag |
11999111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 348
Target Start/End: Complemental strand, 43625327 - 43625127
Alignment:
| Q |
148 |
tgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactct |
247 |
Q |
| |
|
||||||||||||| | ||||||||||| || ||||| ||||| |||||||| |||||||| || ||| || | |||||| |||||||||| | ||| | |
|
|
| T |
43625327 |
tgacttcttttcatcaatcactcgtgccaaatttgatgaaataaatatggatcttttcaacgagtgtttgaaaactgttaagagttgtcttattgatgcc |
43625228 |
T |
|
| Q |
248 |
aagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaagg |
347 |
Q |
| |
|
||| ||||||||||| ||| | ||||||||||||||||| ||||| ||||| ||||| ||||| | ||||| ||| ||| ||||||||||| |||| |
|
|
| T |
43625227 |
aagttggacaagagtgctatccacgatgttgtccttgttggcggctcctctagaattccaaaagtaaaacagctgttgcaggagtttttcaaggggaagg |
43625128 |
T |
|
| Q |
348 |
a |
348 |
Q |
| |
|
| |
|
|
| T |
43625127 |
a |
43625127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 316
Target Start/End: Original strand, 16662136 - 16662413
Alignment:
| Q |
39 |
ggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatt |
138 |
Q |
| |
|
|||| |||||||||||||||||| ||||||| || || ||||| ||||||||||||||||| | | ||| |||||||||| ||| |||| |
|
|
| T |
16662136 |
ggaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctctttcaaattggtcaccgctattgagattgattatttata |
16662235 |
T |
|
| Q |
139 |
tgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctc |
238 |
Q |
| |
|
|||| || |||||||| | || | ||||||||| |||||||| ||||||||||||| |||||| || || |||||| ||| ||||||||||||| | |
|
|
| T |
16662236 |
cgaggacattgacttctctacatcactcactcgtgtcaagtttgaagaaatcaatatgggcctttttaacgagtgtatgaagattgttgagagttgtttt |
16662335 |
T |
|
| Q |
239 |
actgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcag |
316 |
Q |
| |
|
|| || |||||||||||| | || || ||||| |||| ||||| || ||||| ||||||||||| ||||||||| |
|
|
| T |
16662336 |
gtggattcaaagatggacaaggggggtgtacatgatattgttcttgtcgggggctcgtctaggattccaaaagtgcag |
16662413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 348
Target Start/End: Complemental strand, 15595081 - 15594749
Alignment:
| Q |
16 |
gaagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacact |
115 |
Q |
| |
|
|||||| | |||||| |||| |||||||||||| ||||||||||| ||||||| ||||| | |||||||||| |||||||||| || || |||| |
|
|
| T |
15595081 |
gaagaacaaagtggatattactgggaacccaagggccttgaggagattgagaactgcgtgcgaaagggcaaaaagggtactctcttttactactgtcact |
15594982 |
T |
|
| Q |
116 |
actattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgta |
215 |
Q |
| |
|
|| |||||| ||||| |||||| | || | ||||||||||||| || | |||||| | |||||||| |||||||| |||||| |||| || || |||| |
|
|
| T |
15594981 |
accattgaggtagattgtttatttaacggtattgacttcttttcatcggttactcgttccaagtttgaagaaatcaacatggacttttttaaggattgta |
15594882 |
T |
|
| Q |
216 |
tggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
315 |
Q |
| |
|
|| ||| |||||||||||||| ||| |||||||| | ||||||||| || ||||| ||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
15594881 |
tgaagatagttgagagttgtcttgatgatgctaagatgaataagagtagtgtaaatgatattgtcattgttggtgggtcttctaggattcccaaagtgca |
15594782 |
T |
|
| Q |
316 |
gcagctattggcggactttttcaagggaaagga |
348 |
Q |
| |
|
|| |||||| ||| |||||| |||||||||| |
|
|
| T |
15594781 |
acaactattgaaggattttttcgagggaaagga |
15594749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 26 - 360
Target Start/End: Original strand, 4678689 - 4679022
Alignment:
| Q |
26 |
gtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgaga |
125 |
Q |
| |
|
|||||||||||| |||| ||| | |||| |||||| ||||||| ||||||| |||||| |||||||||||||| | ||| ||| ||| ||||| |
|
|
| T |
4678689 |
gtggacattagtaagaacgcaaaacccttaaggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgag- |
4678787 |
T |
|
| Q |
126 |
tagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgt |
225 |
Q |
| |
|
||||| | |||||| |||| | ||||| | |||| | || |||||||| |||||||||||||| ||||||||||||||||| || |||||||| ||||| |
|
|
| T |
4678788 |
tagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgt |
4678887 |
T |
|
| Q |
226 |
tgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattg |
325 |
Q |
| |
|
| |||||||||| | ||| || |||||| | ||||| ||| ||||||||||| ||||| ||||| || || |||||||||||||||||| | |||||| |
|
|
| T |
4678888 |
taagagttgtcttagtgattcaaagatgcgcgggagtaatattgatgatgttgttcttgtgggtggttcatcgaggattcccaaagtgcaggatctattg |
4678987 |
T |
|
| Q |
326 |
gcggactttttcaagggaaaggatctgtgcaagag |
360 |
Q |
| |
|
|||||||| ||| | |||||| |||||||||| |
|
|
| T |
4678988 |
caagacttttttaagcggaaggatttgtgcaagag |
4679022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 357
Target Start/End: Original strand, 34467054 - 34467250
Alignment:
| Q |
164 |
atcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatga---atgtatggagactgttgagagttgtctcactgactctaagatggacaaga |
260 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| | || || || ||| ||| || ||||| ||||||||| ||| |||||||||||| || |
|
|
| T |
34467054 |
atcactcgtgccaagtttgaggaaatcaatatggacttctttaaagattaatgcatgaggattgttgtgagttgtcttgttgatgctaagatggacacga |
34467153 |
T |
|
| Q |
261 |
gtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatctgtgcaa |
357 |
Q |
| |
|
||||| | |||||| ||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||| ||||| |
|
|
| T |
34467154 |
gtagtgtgcatgatgctgtccttgtcgggggctcttctaggattcccaaagtgcagcagctattgcgggactttttcaatggtaaggatctatgcaa |
34467250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 52549293 - 52549353
Alignment:
| Q |
176 |
aagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtc |
236 |
Q |
| |
|
|||||||||||||| |||||||||||||| || || |||||| ||| |||||| ||||||| |
|
|
| T |
52549293 |
aagtttgaggaaatgaatatggacctttttaaggagtgtatgaagattgttgaaagttgtc |
52549353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 312
Target Start/End: Complemental strand, 28219955 - 28219669
Alignment:
| Q |
26 |
gtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgaga |
125 |
Q |
| |
|
|||||||||| ||| ||| |||||||||| |||||| ||||||| ||| ||| |||||||||||||| |||||| |||||| | | || |||||| |
|
|
| T |
28219955 |
gtggacattactggaaactcaagagccttaaggaggttgagaacagcgtgcaagagagcaaaaaggacactatcttttgctgttgtcgccaccattgagg |
28219856 |
T |
|
| Q |
126 |
tagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgt |
225 |
Q |
| |
|
||||| | |||||||| |||| ||| ||||||||| | || |||||||| ||||||||||||||||||||||| ||||||||||| ||| || | ||||| |
|
|
| T |
28219855 |
tagattctttatttgaaggcattgatttcttttcatcaattactcgtgctaagtttgaggaaatcaatatggatcttttcaatgagtgtttgaaaactgt |
28219756 |
T |
|
| Q |
226 |
tgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagt |
312 |
Q |
| |
|
|||||| ||||||||||| | || ||||||||||| | || | |||||||| |||||||| ||||| ||||| ||||| ||||| |
|
|
| T |
28219755 |
tgagaggtgtctcactgatgccaatatggacaagagggctgtacacgatgttgttcttgttggaggctcctctagaattccaaaagt |
28219669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 30775195 - 30774990
Alignment:
| Q |
120 |
ttgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatgga |
219 |
Q |
| |
|
||||||||||| |||||| | | || |||||| | |||| | |||||||||| ||||||||||||||||||||||||||||| ||||| ||||| | |
|
|
| T |
30775195 |
ttgagatagataatttatttcaagacattgacttttcttcatcaatcactcgtgtcaagtttgaggaaatcaatatggacctttttaatgagtgtataca |
30775096 |
T |
|
| Q |
220 |
gactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcag |
319 |
Q |
| |
|
|||||||||||||||||| ||||| || ||| | |||||||||||| |||||||| |||| ||||| ||||| |||||||||||||||||||||||| | |
|
|
| T |
30775095 |
gactgttgagagttgtcttactgattcaaaggtagacaagagtagtgtagatgatattgttcttgtcggtggttcttctaggattcccaaagtgcaggaa |
30774996 |
T |
|
| Q |
320 |
ctattg |
325 |
Q |
| |
|
|||||| |
|
|
| T |
30774995 |
ctattg |
30774990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 176 - 360
Target Start/End: Complemental strand, 35132344 - 35132159
Alignment:
| Q |
176 |
aagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagta-gtatagatgat |
274 |
Q |
| |
|
|||||||||||||| ||| |||||||| ||||| |||||| | || || ||||||||||||| ||| |||||||||||||||| | | |||||||| |
|
|
| T |
35132344 |
aagtttgaggaaatgaatgcagacctttttaatgagtgtatgaataccgtagagagttgtctcattgatgctaagatggacaagagcaagggtagatgat |
35132245 |
T |
|
| Q |
275 |
gttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatctgtgcaagag |
360 |
Q |
| |
|
||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| |
|
|
| T |
35132244 |
gttgttcttgttggagggtcttctaggattcccaaagtgcagcagctattgcaaaactttttcaaagggaaggagttgtgcaagag |
35132159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 348
Target Start/End: Original strand, 9336036 - 9336344
Alignment:
| Q |
40 |
gaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttattt |
139 |
Q |
| |
|
|||||||| | |||| |||||| ||||||| || |||| ||||||||||| ||| |||||| || ||| || ||| ||||| ||||||| |||||| |
|
|
| T |
9336036 |
gaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactgtcttttgcttttgttaccactgttgaggtagatgctttattt |
9336135 |
T |
|
| Q |
140 |
gagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctca |
239 |
Q |
| |
|
||| | ||||| | |||| | ||||||||||| || ||||||||| | || |||||| |||||||||| |||||| | | |||||| | ||||||| |
|
|
| T |
9336136 |
atgggaatcgacttttcttcatcaatcactcgtgccaaatttgaggaacttaacatggactttttcaatgagtgtatgaatattgttgacacctgtctca |
9336235 |
T |
|
| Q |
240 |
ctgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaa |
339 |
Q |
| |
|
|| || ||||| ||||||||| ||| |||||| |||| ||||| |||||||| ||||||||||| |||||||| | |||||| || |||||||| |
|
|
| T |
9336236 |
gggattcaaagatatacaagagtaatattgatgatattgttcttgtgggtggctcgtctaggattccgaaagtgcaagaactattgctagaatttttcaa |
9336335 |
T |
|
| Q |
340 |
gggaaagga |
348 |
Q |
| |
|
||| ||||| |
|
|
| T |
9336336 |
ggggaagga |
9336344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 11160950 - 11160896
Alignment:
| Q |
250 |
gatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggatt |
304 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||| |||||||| |
|
|
| T |
11160950 |
gatggacaagagtagcattcatgatgttgtccttgttggtggctctactaggatt |
11160896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 11199526 - 11199472
Alignment:
| Q |
250 |
gatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggatt |
304 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||| |||||||| |
|
|
| T |
11199526 |
gatggacaagagtagcattcatgatgttgtccttgttggtggctctactaggatt |
11199472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 11156083 - 11156029
Alignment:
| Q |
250 |
gatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggatt |
304 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||| | |||||| |
|
|
| T |
11156083 |
gatggacaagagtagcattcatgatgttgtccttgttggtggctctaccaggatt |
11156029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 11196536 - 11196482
Alignment:
| Q |
250 |
gatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggatt |
304 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||| |||||| |||||||| |
|
|
| T |
11196536 |
gatggacaagagtagcattcatgatgttgtccttgttggcggctctactaggatt |
11196482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 11241778 - 11241832
Alignment:
| Q |
250 |
gatggacaagagtagtatagatgatgttgtccttgttggtggctcttctaggatt |
304 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||| ||||||| |
|
|
| T |
11241778 |
gatggacaagagtagcattcatgatgttgtccttgttggtggctctattaggatt |
11241832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 11132805 - 11132769
Alignment:
| Q |
252 |
tggacaagagtagtatagatgatgttgtccttgttgg |
288 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
11132805 |
tggacaagagtagtattcatgatgttgtccttgttgg |
11132769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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