View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12521_low_22 (Length: 356)
Name: NF12521_low_22
Description: NF12521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12521_low_22 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 19 - 356
Target Start/End: Original strand, 43855280 - 43855617
Alignment:
| Q |
19 |
agacaataacagaaacaatagcatgaagtaaacaaatgaggaaaacaatggacataagaaatacctgatgatcagggattttaacaacaaccaagaaaaa |
118 |
Q |
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| T |
43855280 |
agacaataacagaaacaatagcatgaagtaaacaaatgaggaaaacaatggacataagaaatacctgatgatcagagattttaacaacaaccaagaaaaa |
43855379 |
T |
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| Q |
119 |
atcattatcaacctctttagtatccttcacaccaacaacaacatccttcttcatgatggacaacttatgaccatgatcctccttaacctcagtatcaaac |
218 |
Q |
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| T |
43855380 |
atcattatcaacctctttagtatccttcacaccaacaacaacatccttcttcatgatggacaacttaggatcatgatcctccttaacctcagtatcaaac |
43855479 |
T |
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| Q |
219 |
cacccttcctcaaacatcctaatacaatcatcactcatctgaaaagcttcaaaatgaacatcagcaccacccatttcctcattcacctcgagcttaacaa |
318 |
Q |
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|||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
43855480 |
cacccttccttaaacaacctaatacaaacatcactcatctgaaaagcttcaaaatgaacatcagcaccacccatttcctcattcacctcgagcttcacaa |
43855579 |
T |
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| Q |
319 |
ccgcggtaacccattccttcaaaccactctcagcatga |
356 |
Q |
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| T |
43855580 |
ccgcggtaacccattccttcaaaccactctcagcatga |
43855617 |
T |
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