View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12521_low_44 (Length: 250)
Name: NF12521_low_44
Description: NF12521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12521_low_44 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 13007279 - 13007056
Alignment:
| Q |
17 |
agactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctaga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
13007279 |
agactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggtcctaga |
13007180 |
T |
 |
| Q |
117 |
agttgtatgggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataa |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13007179 |
agttgtatgggcaaggatattagcttcattcaaatgaagatggtcgcagcagctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataa |
13007080 |
T |
 |
| Q |
217 |
ccccgaagctttcttttgttcttc |
240 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
13007079 |
ccccgaagctttcttttgttcttc |
13007056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 13101079 - 13100857
Alignment:
| Q |
17 |
agactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctaga |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
13101079 |
agactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaat-caggacctaga |
13100981 |
T |
 |
| Q |
117 |
agttgtatgggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataa |
216 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
13100980 |
agttgtatgggtaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccgaagtttcacatacaggtggtggaaggtcaccctataa |
13100881 |
T |
 |
| Q |
217 |
ccccgaagctttcttttgttcttc |
240 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
13100880 |
ccccgaagctttcttttgttcttc |
13100857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 13070289 - 13070512
Alignment:
| Q |
17 |
agactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctaga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
13070289 |
agactgcatggaatttaagcctgagagatgggtatcagagacaggacacattatacatgttccatcttacaagttcatagctttcaatacaggtccgaga |
13070388 |
T |
 |
| Q |
117 |
agttgtatgggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataa |
216 |
Q |
| |
|
|||||| |||| || ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| ||| |
|
|
| T |
13070389 |
agttgtttgggtaaagatcttagtttcattcaaatgaagatggtcgcagctgctttgttacagaagtttcacatacaggtggtggaaggtcaccctgtaa |
13070488 |
T |
 |
| Q |
217 |
ccccgaagctttcttttgttcttc |
240 |
Q |
| |
|
|||| |||||||| |||||||||| |
|
|
| T |
13070489 |
ccccaaagctttcatttgttcttc |
13070512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 13204538 - 13204315
Alignment:
| Q |
17 |
agactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctaga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
13204538 |
agactgcatggaatttaagcctgagagatgggtatcagagacaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggtcctaga |
13204439 |
T |
 |
| Q |
117 |
agttgtatgggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataa |
216 |
Q |
| |
|
|||||| |||| || ||| |||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||| |||||||||| ||| |
|
|
| T |
13204438 |
agttgtttgggtaaagatcttagtttcattcaaatgaagatggtcgcagctgctttgttacagaattttcacataaagatagtggaaggtcaccctgtaa |
13204339 |
T |
 |
| Q |
217 |
ccccgaagctttcttttgttcttc |
240 |
Q |
| |
|
|||| ||| ||||||||||||||| |
|
|
| T |
13204338 |
ccccaaagatttcttttgttcttc |
13204315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 220
Target Start/End: Original strand, 30368225 - 30368424
Alignment:
| Q |
21 |
tgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctagaagtt |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30368225 |
tgcatggaatttaagcctgagagatgggtatcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctagaagtt |
30368324 |
T |
 |
| Q |
121 |
gtatgggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataacccc |
220 |
Q |
| |
|
||||||| || ||| |||| ||| |||||||||||||||| |||||||| |||||| |||||||||||| |||| |||| |||||||||| ||||||| |
|
|
| T |
30368325 |
gtatgggtaaagatcttagtttcgttcaaatgaagatggttgcagctgccttgttatggaagtttcacatacaggtcgtggaaggtcaccctgtaacccc |
30368424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 13094478 - 13094265
Alignment:
| Q |
17 |
agactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctaga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || ||||| ||| | |||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
13094478 |
agactgcatggaatttaagcctgagagatggatatctgagaggggagatattatacatgtaccatcttacaagttcatagctttcaacacaggacccaga |
13094379 |
T |
 |
| Q |
117 |
agttgtatgggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataa |
216 |
Q |
| |
|
| |||||| || || |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| ||| |
|
|
| T |
13094378 |
atttgtataggtaaagatattagtttcattcaaatgaagatggtcgcagctgctttgttacggaagtttcacatacaggtggtggaaggtcaccctgtaa |
13094279 |
T |
 |
| Q |
217 |
ccccgaagctttct |
230 |
Q |
| |
|
|||| | ||||||| |
|
|
| T |
13094278 |
ccccaaggctttct |
13094265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 13129907 - 13129694
Alignment:
| Q |
17 |
agactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctaga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || ||||| ||| | ||||||||||||||||||||||||||| |||||||||| |||||||| ||| |
|
|
| T |
13129907 |
agactgcatggaatttaagcctgagagatggatatctgagaggggagatattatacatgtaccatcttacaagttcgtagctttcaacacaggacccaga |
13129808 |
T |
 |
| Q |
117 |
agttgtatgggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataa |
216 |
Q |
| |
|
| |||||| || || ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| ||| |
|
|
| T |
13129807 |
atttgtataggtaaagatcttagtttcattcaaatgaagatggtcgcagctgctttgttacagaagtttcacatacaggtggtggaaggtcaccctgtaa |
13129708 |
T |
 |
| Q |
217 |
ccccgaagctttct |
230 |
Q |
| |
|
|||| | ||||||| |
|
|
| T |
13129707 |
ccccaaggctttct |
13129694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 13161600 - 13161387
Alignment:
| Q |
17 |
agactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctaga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || ||||| ||| | |||||||||||||| ||||||||||||||| ||||||| |||||||| ||| |
|
|
| T |
13161600 |
agactgcatggaatttaagcctgagagatggatatctgagaggggagatattatacatgtaccttcttacaagttcatatctttcaacacaggacccaga |
13161501 |
T |
 |
| Q |
117 |
agttgtatgggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataa |
216 |
Q |
| |
|
| |||||| || || ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| | ||| |
|
|
| T |
13161500 |
atttgtataggtaaagatcttagtttcattcaaatgaagatggtcgcagctgctttgttacggaagtttcacatacaggtggtggaaggtcaccttgtaa |
13161401 |
T |
 |
| Q |
217 |
ccccgaagctttct |
230 |
Q |
| |
|
|||| | ||||||| |
|
|
| T |
13161400 |
ccccaaggctttct |
13161387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 217
Target Start/End: Original strand, 13244642 - 13244834
Alignment:
| Q |
25 |
tggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctagaagttgtat |
124 |
Q |
| |
|
|||||||||||||||| |||||| | |||| |||||| |||||| ||||||| |||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
13244642 |
tggaatttaagcctgaaagatggatatcagctagaggagggattataaatgtaccgtcttacaagttcatagctttcaatgcaggtcctagaagttgtat |
13244741 |
T |
 |
| Q |
125 |
gggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataac |
217 |
Q |
| |
|
|| || ||| |||||||| |||||||||| ||||| |||||| |||||||| ||||||| |||| ||||||||| |||||||||| |||| |
|
|
| T |
13244742 |
tgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttatggaagtttcgcatacaggtggtggaaggtcaccctgtaac |
13244834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 208
Target Start/End: Complemental strand, 13271657 - 13271474
Alignment:
| Q |
25 |
tggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctagaagttgtat |
124 |
Q |
| |
|
|||| |||||||||||||||||| | ||||| | |||||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||| | |
|
|
| T |
13271657 |
tggagtttaagcctgagagatggatatcagataaaggacaaattatacatgtaccatcttacaagttcatagcattcaatgcaggtcctagaagctgtct |
13271558 |
T |
 |
| Q |
125 |
gggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtca |
208 |
Q |
| |
|
|| || ||||||||||| ||||||||||| ||||| |||||| || | ||| |||||||||||| | ||||||| |||||| |
|
|
| T |
13271557 |
tgggaaagatattagctttattcaaatgaaaatggttgcagcttctgtattatggaagtttcacatacatgtggtggaaggtca |
13271474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 13065326 - 13065468
Alignment:
| Q |
17 |
agactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctaga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||| | || ||||| |||||||||||||| |||||||||||||||||||||||| |||| || ||| |
|
|
| T |
13065326 |
agactgcatggaatttaagcctgagagatggatatcaaaaagcggacaaattatacatgtaccgtcttacaagttcatagctttcaatgcagggccaaga |
13065425 |
T |
 |
| Q |
117 |
agttgtatgggcaaggatattagcttcattcaaatgaagatgg |
159 |
Q |
| |
|
|||||| |||| || ||||| | |||| || |||||||||||| |
|
|
| T |
13065426 |
agttgtttgggtaaagatatcaccttcgttgaaatgaagatgg |
13065468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 12963996 - 12964180
Alignment:
| Q |
25 |
tggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctagaagttgtat |
124 |
Q |
| |
|
|||||||||||||||| |||||| | ||| | |||||| | |||||||| || |||||||| ||||||||||| |||||| |||| |||||||||||||| |
|
|
| T |
12963996 |
tggaatttaagcctgaaagatggatatcaaatagaggagaaattatacaagtgccatcttataagttcatagcattcaatgcaggtcctagaagttgtat |
12964095 |
T |
 |
| Q |
125 |
gggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcac |
209 |
Q |
| |
|
|| || ||||||||||| |||||||||| ||||| || ||| | |||| |||||||||||| | ||||||| ||||||| |
|
|
| T |
12964096 |
tgggaaagatattagctttgttcaaatgaaaatggttgctgctaatgtgttgtggaagtttcacatagaagtggtggaaggtcac |
12964180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 208
Target Start/End: Complemental strand, 13086176 - 13085995
Alignment:
| Q |
27 |
gaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctagaagttgtatgg |
126 |
Q |
| |
|
||||||||||| ||||||||| | ||||| | |||||| ||| | ||||||||||||| |||||||||||| || ||| |||| ||| |||||||| | | |
|
|
| T |
13086176 |
gaatttaagcccgagagatggatatcagataaaggacatattttgcatgtaccatcttgcaagttcatagcatttaatgcaggtcctcgaagttgtcttg |
13086077 |
T |
 |
| Q |
127 |
gcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtca |
208 |
Q |
| |
|
| || ||||||||| | |||||||||| ||||| ||||||||| ||||| |||||||||||| | || |||| |||||| |
|
|
| T |
13086076 |
ggaaagatattagcattgttcaaatgaaaatggttgcagctgctatgttatggaagtttcacatacaagttgtggaaggtca |
13085995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 209
Target Start/End: Original strand, 19279299 - 19279473
Alignment:
| Q |
35 |
gcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctagaagttgtatgggcaaggat |
134 |
Q |
| |
|
||||||||||||| | || || |||||||| ||||||||||||||||| |||||||||||||| || ||| |||| || ||||| ||| | || || ||| |
|
|
| T |
19279299 |
gcctgagagatggatatcggatagaggacaaattatacatgtaccatcgtacaagttcatagcgtttaatgcaggtccgagaagctgtctcggaaaagat |
19279398 |
T |
 |
| Q |
135 |
attagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcac |
209 |
Q |
| |
|
|||| ||| |||||||||| ||||| ||||||||| | ||| ||||||| |||| |||| |||| ||||||| |
|
|
| T |
19279399 |
attactttccttcaaatgaaaatggttgcagctgctgtattatggaagtttcgcatacaggtcgtggaaggtcac |
19279473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 13080986 - 13081170
Alignment:
| Q |
25 |
tggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctagaagttgtat |
124 |
Q |
| |
|
|||| |||||||||||||||||| | ||||| |||||||| |||||||| || || ||||| ||||||||||| || ||| |||| || ||||| ||| | |
|
|
| T |
13080986 |
tggagtttaagcctgagagatggatatcagatagaggacaaattatacaagtgccgtcttataagttcatagcgtttaatgcaggtccaagaagctgtct |
13081085 |
T |
 |
| Q |
125 |
gggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcac |
209 |
Q |
| |
|
|| || |||||||| || |||||||||| ||||| |||||||| | ||| ||||||||||| ||||||||| ||||||| |
|
|
| T |
13081086 |
tgggaaagatattagttttcttcaaatgaaaatggttgcagctgcagttttatttaagtttcacattcaggtggtggaaggtcac |
13081170 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 13010747 - 13010629
Alignment:
| Q |
122 |
tatgggcaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccaaagtttcacataaaggtggtggcaggtcaccctataaccccg |
221 |
Q |
| |
|
||||||| | ||| |||| ||||||| |||||||||||||||||||| ||||||| || |||| |||| | ||||||| |||||| | |||||||| |
|
|
| T |
13010747 |
tatgggcgaagatcttagtttcattctaatgaagatggtcgcagctgatttgttatggaaatttcgcatacaagtggtggaaggtcatgccataacccca |
13010648 |
T |
 |
| Q |
222 |
aagctttcttttgttcttc |
240 |
Q |
| |
|
|| |||||| || |||||| |
|
|
| T |
13010647 |
aaactttctattattcttc |
13010629 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 36668149 - 36668061
Alignment:
| Q |
72 |
catgtaccatcttacaagttcatagctttcaatacaggacctagaagttgtatgggcaaggatattagcttcattcaaatgaagatggt |
160 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||| | ||||| || ||| || |||| |||||||| ||||||||| | |||||||||| |
|
|
| T |
36668149 |
catgtaccttcttacaagttcattgctttcaatgctggaccaaggagtcgtttgggtaaggatataagcttcattgagttgaagatggt |
36668061 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 12175822 - 12175734
Alignment:
| Q |
72 |
catgtaccatcttacaagttcatagctttcaatacaggacctagaagttgtatgggcaaggatattagcttcattcaaatgaagatggt |
160 |
Q |
| |
|
||||| || |||||||||||||| ||||||||| | ||||| || |||||| |||| |||||||| ||||||||| | ||||| ||||| |
|
|
| T |
12175822 |
catgttccctcttacaagttcattgctttcaatgctggaccaaggagttgtttgggtaaggatataagcttcattgagatgaaaatggt |
12175734 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 12164288 - 12164209
Alignment:
| Q |
81 |
tcttacaagttcatagctttcaatacaggacctagaagttgtatgggcaaggatattagcttcattcaaatgaagatggt |
160 |
Q |
| |
|
|||||||||||||| ||||| ||| | ||||| || |||||| |||| |||||||| ||||||||| | ||||| ||||| |
|
|
| T |
12164288 |
tcttacaagttcattgcttttaatgctggaccaaggagttgtttgggtaaggatataagcttcattgagatgaaaatggt |
12164209 |
T |
 |
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Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 31380253 - 31380325
Alignment:
| Q |
86 |
caagttcatagctttcaatacaggacctagaagttgtatgggcaaggatattagcttcattcaaatgaagatg |
158 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||| || || ||| |||| ||||||||||| |||||| |
|
|
| T |
31380253 |
caagttcatatctttcaatacaggacccggaagttgtattggtaaagatcttagtttcattcaaattaagatg |
31380325 |
T |
 |
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