View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12522_low_11 (Length: 255)
Name: NF12522_low_11
Description: NF12522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12522_low_11 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 28036154 - 28035912
Alignment:
| Q |
13 |
tagcaaaggtgctcatgaagattataagcttgttgctcacccaggtactaatcaaacatctaaccaaatgcataatgtcatctctaacacaatagccata |
112 |
Q |
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| T |
28036154 |
tagcaaaggtgctcatgaagattataagcttgttgctcacccaggtactaatcaaacatctaaccaaatgcataatgtcatctctaacacaatagccata |
28036055 |
T |
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| Q |
113 |
aagggaaataatagtaaggattctaaagaagataatgccaacgatgttgtaaagcacaacatcaacatcaacagccacagccacaataaccacaatgtat |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28036054 |
aagggaaataatagtaaggattctaaagaagataatgccaacgatgttgaaaagcacaacatcaacatcaacagccacagccacaataaccacaatgtat |
28035955 |
T |
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| Q |
213 |
ctatagcggggacgagtatcaaagggagagaatttgaagatcc |
255 |
Q |
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| T |
28035954 |
ctatagcggggacgagtatcaaagggagagaatttgaagatcc |
28035912 |
T |
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