View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12522_low_12 (Length: 253)
Name: NF12522_low_12
Description: NF12522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12522_low_12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 33 - 253
Target Start/End: Complemental strand, 9980602 - 9980383
Alignment:
| Q |
33 |
ggtaacaaaatttctaattttgaattattcttatacaaattaattaagttataatataagcacttaatttgaaagctttgttaaataatcatatacttaa |
132 |
Q |
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| T |
9980602 |
ggtaacaaaatttctaattttgaattattcttatacaa-ttaattaagttataatataagcacttaatttgaaagctttgttaaataatcatatacttaa |
9980504 |
T |
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| Q |
133 |
cttagttgtaattttgcagttcttcctgttgtcatggatatcacagtgaaccttccagatgaaactagtgttgttctcaaggtttgtttaagtttattaa |
232 |
Q |
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| T |
9980503 |
cttagttgtaattttgcagttcttcctgttgtcatggatatcacagtgaaccttccagatgaaactagtgttgttctcaaggtttgtttaagtttattaa |
9980404 |
T |
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| Q |
233 |
ttaatttgtgaagagattgaa |
253 |
Q |
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| T |
9980403 |
ttaatttgtgaagagattgaa |
9980383 |
T |
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