View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12523_high_14 (Length: 216)
Name: NF12523_high_14
Description: NF12523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12523_high_14 |
 |  |
|
| [»] chr7 (5 HSPs) |
 |  |
|
| [»] scaffold0016 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 101; Significance: 3e-50; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 46524934 - 46524810
Alignment:
| Q |
92 |
tatttatgtcggctcatttgtccattataaagtatcatcaagtatcaacagcatcaaaatattgaaatttcttcacagttgctctgagcccnnnnnnnng |
191 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
46524934 |
tatttatgtcggctcatttgtccattataaagtatcatcaagtatcaacagcatcaaaatattgaaatttcttcacagttgctctgagcccaaaaaaaag |
46524835 |
T |
 |
| Q |
192 |
aacacagatggaaggaatagaacac |
216 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
46524834 |
aacacagatggaaggaatagaacac |
46524810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 11016953 - 11017020
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccgta |
93 |
Q |
| |
|
|||||||||| |||||||| ||||| | |||||||||| || | |||||||||||||||||||||||| |
|
|
| T |
11016953 |
ttgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgctacccgta |
11017020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 4290629 - 4290696
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccgta |
93 |
Q |
| |
|
|||||||||| ||||||| ||||| | |||||||||| || | |||||||||||||||||||||||| |
|
|
| T |
4290629 |
ttgtgacattgtgattggccaatgtcaccaatgtcacccaactgtatgtcacccaagtgctacccgta |
4290696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 46532473 - 46532395
Alignment:
| Q |
94 |
tttatgtcggctcatttgtccattataaagtatcatcaagtatcaacagcatcaaaatattg-aaatttcttcacagttgctctga |
178 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
46532473 |
tttatgtcggttcatttgtccgttataaagtatca-------tcaaccgcatcaaaatattgaaaatttcttcatagttgctctga |
46532395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 41945906 - 41945844
Alignment:
| Q |
29 |
tgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccg |
91 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||| |||| ||||||| | |||||||||||| |
|
|
| T |
41945906 |
tgacattatgattgactaatgtcatcaatgtcactcaattctatgtcatctaagtgctacccg |
41945844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 49757 - 49691
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccgt |
92 |
Q |
| |
|
|||||||||| |||||||| ||||| |||||||||||| || | ||||||||||||||||||||||| |
|
|
| T |
49757 |
ttgtgacattgtgattggtcaatgtcatcaatgtcacccaactctatgtcacccaagtgctacccgt |
49691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 5033245 - 5033311
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccgt |
92 |
Q |
| |
|
|||||||||| |||||||| ||||| | |||||||||| || | ||||||||||||||||||||||| |
|
|
| T |
5033245 |
ttgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgctacccgt |
5033311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 33841645 - 33841580
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccg |
91 |
Q |
| |
|
|||||||| | |||||||| ||||| | |||||||||| || | |||||||||||||||||||||| |
|
|
| T |
33841645 |
ttgtgacaatgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgctacccg |
33841580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 35441023 - 35440958
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccg |
91 |
Q |
| |
|
|||||||||| |||||||| ||||| | |||||||||| || | || ||||||||||||||||||| |
|
|
| T |
35441023 |
ttgtgacattgtgattggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgctacccg |
35440958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 1880289 - 1880229
Alignment:
| Q |
29 |
tgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
||||||| |||||||| ||||| | || ||||||| |||| ||||||||||||||||||||| |
|
|
| T |
1880289 |
tgacattgtgattggtcaatgtcaccagtgtcacc-aattctatgtcacccaagtgctaccc |
1880229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 16971228 - 16971293
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccg |
91 |
Q |
| |
|
|||||||||| |||||||| ||||| | |||||||||| || | |||||||||||||||||||||| |
|
|
| T |
16971228 |
ttgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgctacccg |
16971293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 13312318 - 13312254
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
|||||||||| |||||| | ||||| ||||||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
13312318 |
ttgtgacattgtgattgatcaatgtcatcaatgtcacctaactctatgtcacctaagtgctaccc |
13312254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 2953274 - 2953338
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
|||||||||| ||||||| ||||| | |||||||||| || | ||||||||||||||||||||| |
|
|
| T |
2953274 |
ttgtgacattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtgctaccc |
2953338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 3899923 - 3899986
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacc |
89 |
Q |
| |
|
|||||||||| |||||||| ||||| | |||||||||| || | || ||||||||||||||||| |
|
|
| T |
3899923 |
ttgtgacattgtgattggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgctacc |
3899986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 291181 - 291245
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
|||||||||| |||||| | ||||| | |||||||||| || | ||| ||||||||||||||||| |
|
|
| T |
291181 |
ttgtgacattgtgattgatcaatgtcaccaatgtcacccaactctatatcacccaagtgctaccc |
291245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 12913857 - 12913793
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
|||||||||| ||||||| ||||| | ||||||||| || |||||||||| |||||||||||| |
|
|
| T |
12913857 |
ttgtgacattgtgattggccaatgtcaccaatgtcactcaactatatgtcacacaagtgctaccc |
12913793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 42375094 - 42375166
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccgtatttat |
98 |
Q |
| |
|
|||||||||| |||||| | ||||| | |||||||||| || | ||||||||||||||||||||| ||||||| |
|
|
| T |
42375094 |
ttgtgacattgtgattgatcaatgtcaccaatgtcacccaactctatgtcacccaagtgctacccttatttat |
42375166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 51265529 - 51265593
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
||||||||||||||||||| ||||| | |||||||||| || | || |||||||||||||||||| |
|
|
| T |
51265529 |
ttgtgacattatgattggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgctaccc |
51265593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 47661926 - 47661990
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
|||||||||| |||||||| ||||| | |||||||||| || | |||||||||||| |||||||| |
|
|
| T |
47661926 |
ttgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaaatgctaccc |
47661990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 30709986 - 30710048
Alignment:
| Q |
28 |
gtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
|||||||| ||||||| ||||| | ||||||||||||| | |||||||||||||||| |||| |
|
|
| T |
30709986 |
gtgacattgtgattggccaatgtcaccaatgtcacctaactctatgtcacccaagtgccaccc |
30710048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 5048881 - 5048942
Alignment:
| Q |
23 |
ttgttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtg |
84 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||| || | ||||||| ||||||| |
|
|
| T |
5048881 |
ttgttgtgacattatgattgaccaatgtcatcaatgtcacccaactctatgtcatccaagtg |
5048942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 35682217 - 35682156
Alignment:
| Q |
29 |
tgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
||||||| ||||||| ||||| | |||| |||||||| | ||||||||||||||||||||| |
|
|
| T |
35682217 |
tgacattgtgattggccaatgtcaccaatatcacctaactctatgtcacccaagtgctaccc |
35682156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 55516963 - 55516999
Alignment:
| Q |
54 |
caatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
55516963 |
caatgtcaccaaattatatgtcacccaattgctaccc |
55516999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 48993971 - 48993907
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
|||||||||| |||||||| ||||| | |||||||||| || | ||||||||||||||||||||| |
|
|
| T |
48993971 |
ttgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgctaccc |
48993907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 32540832 - 32540895
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacc |
89 |
Q |
| |
|
|||| ||||| |||||||| ||||| | |||||||| | |||| |||||||||||||||||||| |
|
|
| T |
32540832 |
ttgtaacattgtgattggtcaatgtcaccaatgtcatccaattctatgtcacccaagtgctacc |
32540895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 29179651 - 29179585
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccgt |
92 |
Q |
| |
|
|||||||||| |||||||| | ||| | |||||||||| || | ||||||| ||||||||||||||| |
|
|
| T |
29179651 |
ttgtgacattgtgattggtcagtgtcaccaatgtcacccaactctatgtcatccaagtgctacccgt |
29179585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 44183438 - 44183475
Alignment:
| Q |
54 |
caatgtcacctaattatatgtcacccaagtgctacccg |
91 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
44183438 |
caatgtcacctaactctatgtcacccaagtgctacccg |
44183475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 5995453 - 5995521
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccgtat |
94 |
Q |
| |
|
||||| |||| |||||||| ||||| | |||||||| | || | ||||||||||||||| ||||||||| |
|
|
| T |
5995453 |
ttgtggcattgtgattggtcaatgtcaccaatgtcatccaactctatgtcacccaagtgttacccgtat |
5995521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 38933671 - 38933737
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccgt |
92 |
Q |
| |
|
|||||||||||||||||| || || | |||||||||| || | ||||||||||||||||||||||| |
|
|
| T |
38933671 |
ttgtgacattatgattggccaacgtcaccaatgtcacccaactctatgtcacccaagtgctacccgt |
38933737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 16514508 - 16514572
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
|||||||||| |||||||| ||||| | |||| ||||| || | ||||||||||||||||||||| |
|
|
| T |
16514508 |
ttgtgacattgtgattggtcaatgtcaccaatctcacccaactctatgtcacccaagtgctaccc |
16514572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 32545872 - 32545940
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccgtat |
94 |
Q |
| |
|
|||||||||||||||||| ||||| | ||||||||| || | |||||||||||||||||| |||||| |
|
|
| T |
32545872 |
ttgtgacattatgattggccaatgtcaccaatgtcactaaactctatgtcacccaagtgctatccgtat |
32545940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 35204154 - 35204218
Alignment:
| Q |
29 |
tgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctacccgta |
93 |
Q |
| |
|
||||||||| |||| ||||| ||||||||| | |||| |||||||||||||||||||||||| |
|
|
| T |
35204154 |
tgacattataattgaccaatgtcatcaatgtctcaaaattctatgtcacccaagtgctacccgta |
35204218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 30734489 - 30734550
Alignment:
| Q |
29 |
tgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
||||||| ||||||| ||||| | ||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
30734489 |
tgacattgtgattggccaatgtcaccaatgtcacctaactctatgtcacccaagtgctaccc |
30734550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 30580810 - 30580752
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtg |
84 |
Q |
| |
|
||||||||||||||||||| ||| | | |||||||||| |||| |||||||| |||||| |
|
|
| T |
30580810 |
ttgtgacattatgattggtcaatatcaccaatgtcacccaattctatgtcactcaagtg |
30580752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 45103163 - 45103099
Alignment:
| Q |
26 |
ttgtgacattatgattggttaatgttatcaatgtcacctaattatatgtcacccaagtgctaccc |
90 |
Q |
| |
|
|||||||||| |||||| | ||| | | |||||||||| || | ||||||||||||||||||||| |
|
|
| T |
45103163 |
ttgtgacattgtgattgatcaatatcaccaatgtcacccaactctatgtcacccaagtgctaccc |
45103099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University