View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12526_high_2 (Length: 239)
Name: NF12526_high_2
Description: NF12526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12526_high_2 |
 | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 41 - 232
Target Start/End: Complemental strand, 4627610 - 4627419
Alignment:
| Q |
41 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4627610 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
4627511 |
T |
|
| Q |
141 |
tggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4627510 |
tggtttaacaccactagaaggtgatggcgatgttactcaagacataccatctctttcccaatcaataagaaagaacttccttcagccctttg |
4627419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 4258804 - 4259035
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
|||||||| ||||||| |||| | |||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4258804 |
aaactagctaagcttcttcactttaaaggttttcacataacctttgtcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccg |
4258903 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
||||||||||| |||||||||||||||||| || | ||||||| | || ||| | ||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
4258904 |
ttgatggtttcattgattttacctttgagactattcaagatggtctgactccagtggaaggtgatggcgatgttactcaagacgtaccctccctttctca |
4259003 |
T |
|
| Q |
201 |
atcaataagaaagaacttccttcagccctttg |
232 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |
|
|
| T |
4259004 |
atctataagaaagaacttccttcagccctttg |
4259035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 4594510 - 4594280
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||| ||||| |||| |||||| | ||| || |||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
4594510 |
aaacttgcaaaacttcttcaccttagaggatttcacataacctttgtcaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcct |
4594411 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
| ||||||||| || ||||| |||||| ||||||||||||||| |||||||| | ||||||||||| ||||||| ||||||||||||||||||| |||| |
|
|
| T |
4594410 |
tagatggtttccctggttttagctttgaaaccataccagatggtctaacaccaatggaaggtgatggtgatgttagtcaagacataccctctcttgctca |
4594311 |
T |
|
| Q |
201 |
atcaataagaaagaacttccttcagcccttt |
231 |
Q |
| |
|
||| ||||||||||| |||||| | |||||| |
|
|
| T |
4594310 |
atctataagaaagaatttccttaaacccttt |
4594280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4623807 - 4623593
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
|||||||||||||||| | |||| ||||| || |||| | |||||| |||| ||||||||||||||||| |||||||||||||||||| ||| |||| |
|
|
| T |
4623807 |
aaactagcaaagcttctttaccttaaaggctttcacataacctttggtcacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcct |
4623708 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
||||||||||| || |||| |||||||||||| |||||||||||||||||| | ||||||||||| ||||||| |||||||||||||||||||||| | |
|
|
| T |
4623707 |
ttgatggtttcacggactttaactttgagaccattccagatggtttaacaccaatggaaggtgatggtgatgttagtcaagacataccctctctttctga |
4623608 |
T |
|
| Q |
201 |
atcaataagaaagaa |
215 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
4623607 |
ttcaataaggaagaa |
4623593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 41 - 183
Target Start/End: Original strand, 4502961 - 4503103
Alignment:
| Q |
41 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
140 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4502961 |
cctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttacctttgagaccataccaga |
4503060 |
T |
|
| Q |
141 |
tggtttaacaccactagaaggtgatggcgatgttactcaagac |
183 |
Q |
| |
|
||||||||| || | ||||||||||| ||||||| ||||||| |
|
|
| T |
4503061 |
tggtttaactccggtggaaggtgatggtgatgttagtcaagac |
4503103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4517840 - 4517626
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||||||||| |||| ||| || | ||| || |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
4517840 |
aaactagcaaaacttcttcatcttagaggctttcacataacctttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcct |
4517741 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||||||||||| || ||||||| ||||| ||||||| ||||||||| ||||||||| | |
|
|
| T |
4517740 |
ttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtgatgttagtcaagacattatctctctttccga |
4517641 |
T |
|
| Q |
201 |
atcaataagaaagaa |
215 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4517640 |
ttcaataagaaagaa |
4517626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 4618801 - 4618580
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
|||||||||||||||| |||||| | ||| || |||| | ||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||| || | |
|
|
| T |
4618801 |
aaactagcaaagcttcttcaccttagaggctttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggctt |
4618702 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
||||||||||| || |||| |||||||| ||| |||||||||||||||||| | ||||||||||| ||||||| |||||| |||| |||||| ||| |
|
|
| T |
4618701 |
ttgatggtttcacggactttaactttgagagcattccagatggtttaacaccaatggaaggtgatggtgatgttagtcaagatgtaccaactctttgtca |
4618602 |
T |
|
| Q |
201 |
atcaataagaaagaacttcctt |
222 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
4618601 |
atcagtaagaaagaacttcctt |
4618580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 4507411 - 4507237
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
|||||||| ||||||| |||||| ||| || |||| | ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4507411 |
aaactagctaagcttcttcaccttcgaggctttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcct |
4507312 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgtta |
175 |
Q |
| |
|
||||||||||| |||||||| ||||||||| |||||||||||||||| ||| | || |||||||| ||||||| |
|
|
| T |
4507311 |
ttgatggtttcactgattttaactttgagactctaccagatggtttaactccaatggatggtgatggtgatgtta |
4507237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 4575915 - 4575761
Alignment:
| Q |
41 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
140 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||||| |
|
|
| T |
4575915 |
cctttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccaga |
4575816 |
T |
|
| Q |
141 |
tggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctt |
195 |
Q |
| |
|
||||||||| ||| || ||| |||| ||||| | ||||||| ||| ||||||| |
|
|
| T |
4575815 |
tggtttaactccaaaggatggtaatggtgatgtaagtcaagacctacactctctt |
4575761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 4581512 - 4581294
Alignment:
| Q |
3 |
actagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgccttt |
102 |
Q |
| |
|
|||||||||||||| |||||| | ||| || |||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| || ||| |
|
|
| T |
4581512 |
actagcaaagcttcttcaccttagaggctttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgttt |
4581413 |
T |
|
| Q |
103 |
gatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaat |
202 |
Q |
| |
|
||||||||| ||||||||||||||||| || |||||||||||||| || ||||||| ||| | ||||||| |||||||||| |||| | | ||| |
|
|
| T |
4581412 |
gatggtttcaccgattttacctttgagactattccagatggtttaactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaat |
4581313 |
T |
|
| Q |
203 |
caataagaaagaacttcct |
221 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
4581312 |
caatcagaaagaacttcct |
4581294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 3173503 - 3173298
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||||||||| || | |||| | | ||| || |||| | ||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||| |
|
|
| T |
3173503 |
aaactagcaaaactacttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcct |
3173404 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | ||||||||||| ||||||| ||||||| ||| | |||||| || |
|
|
| T |
3173403 |
ttgatggtttcaatgattttaactttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcg |
3173304 |
T |
|
| Q |
201 |
atcaat |
206 |
Q |
| |
|
|||||| |
|
|
| T |
3173303 |
atcaat |
3173298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 4488865 - 4489006
Alignment:
| Q |
41 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
140 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||| || ||||| |
|
|
| T |
4488865 |
cctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgattttagctttgagactattccaga |
4488964 |
T |
|
| Q |
141 |
tggtttaacaccactagaaggtgatggcgatgttactcaaga |
182 |
Q |
| |
|
||||||||| ||| ||| |||||||||||||||| |||||| |
|
|
| T |
4488965 |
tggtttaactccaacagatggtgatggcgatgttagtcaaga |
4489006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4558625 - 4558405
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||||||||| |||| |||||| | ||| || |||| | ||| ||| |||||||||||||| |||||||| |||||||| ||||||||| |||||||| |
|
|
| T |
4558625 |
aaactagcaaaacttcttcaccttagaggatttcacataacctatgtaaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcct |
4558526 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
||||||||||| |||||||| ||||||||| || || ||||||||||| ||| || |||||||||||||||| ||||||||| | |||||| | | |
|
|
| T |
4558525 |
ttgatggtttcactgattttagctttgagactattccggatggtttaactccaacggatggtgatggcgatgttagtcaagacatttacgctctttgtaa |
4558426 |
T |
|
| Q |
201 |
atcaataagaaagaacttcct |
221 |
Q |
| |
|
|||||| |||||||||||||| |
|
|
| T |
4558425 |
atcaatcagaaagaacttcct |
4558405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 4562121 - 4561968
Alignment:
| Q |
41 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
140 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||||| |
|
|
| T |
4562121 |
cctttgttaacactgaatacaatcacaaacgtttgct-aaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccaga |
4562023 |
T |
|
| Q |
141 |
tggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctt |
195 |
Q |
| |
|
||||||||| ||| || |||||||| ||| ||| ||||||| ||| ||||||| |
|
|
| T |
4562022 |
tggtttaactccaaaggatggtgatggtgatattagtcaagacctacactctctt |
4561968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 41 - 222
Target Start/End: Complemental strand, 4565489 - 4565308
Alignment:
| Q |
41 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
140 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| ||||||| | || |||| |||||| ||||||||||| |
|
|
| T |
4565489 |
cctttgtcaacactgaatacaatcataaacgattgctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaaccataccaga |
4565390 |
T |
|
| Q |
141 |
tggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcctt |
222 |
Q |
| |
|
|||| ||||||| ||||||||||||| ||||||| |||||| |||| |||||| ||||||| |||||||| || |||||| |
|
|
| T |
4565389 |
tggtctaacaccgatagaaggtgatggtgatgttagtcaagatgtaccttctcttgctcaatctataagaaaaaatttcctt |
4565308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 206
Target Start/End: Complemental strand, 4482325 - 4482160
Alignment:
| Q |
41 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
140 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| || |||||||| |
|
|
| T |
4482325 |
cctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccaga |
4482226 |
T |
|
| Q |
141 |
tggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaat |
206 |
Q |
| |
|
||||||||| ||| | |||||||||| || || | ||||||| || ||||||| |||||||||| |
|
|
| T |
4482225 |
tggtttaactccaattgaaggtgatgatgaagtaagtcaagacttattctctcttactcaatcaat |
4482160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 232
Target Start/End: Original strand, 4265688 - 4265916
Alignment:
| Q |
4 |
ctagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttg |
103 |
Q |
| |
|
|||| |||||||| |||||| | ||| || |||| | ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||| |
|
|
| T |
4265688 |
ctaggaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttg |
4265787 |
T |
|
| Q |
104 |
atggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatc |
203 |
Q |
| |
|
|||||||| ||| |||| ||||||||||||||||||||| |||| ||| | ||||| |||| |||| ||||||||||||| | ||||| ||||| |
|
|
| T |
4265788 |
atggtttcagtgactttaagtttgagaccataccagatggtctaactccaatggaaggcaatggtgatgctactcaagacatataccctcttgtgcaatc |
4265887 |
T |
|
| Q |
204 |
aataagaaagaacttccttcagccctttg |
232 |
Q |
| |
|
||| | | |||||||||||| ||||||| |
|
|
| T |
4265888 |
aatcatgacgaacttccttcaaccctttg |
4265916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 47 - 232
Target Start/End: Original strand, 4298172 - 4298357
Alignment:
| Q |
47 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
146 |
Q |
| |
|
||||||| |||||||||||||||| ||||| ||||||| ||| ||| || |||||||||||| | |||| ||||||||| || ||||||||| | |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtct |
4298271 |
T |
|
| Q |
147 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
232 |
Q |
| |
|
|| ||| ||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
4298272 |
gactccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttg |
4298357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 4603610 - 4603380
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||||||||| || |||||| | ||| || |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4603610 |
aaactagcaaaactatttcaccttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcct |
4603511 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
| || || ||| |||||||| |||||| || || |||||||| ||||||| | |||||||||| |||||| |||||| |||| ||| ||||||| |
|
|
| T |
4603510 |
tagacggcttcactgattttagctttgaaacaatcccagatggactaacaccgatggaaggtgatgataatgttagtcaagatgtaccttctatttctca |
4603411 |
T |
|
| Q |
201 |
atcaataagaaagaacttccttcagcccttt |
231 |
Q |
| |
|
||| ||||||||||| |||||| | |||||| |
|
|
| T |
4603410 |
atctataagaaagaatttccttaaacccttt |
4603380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 41 - 221
Target Start/End: Complemental strand, 4587092 - 4586912
Alignment:
| Q |
41 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
140 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||| || ||||||| | |||||||||||||| ||| |||||||| ||||||||| || ||||| |
|
|
| T |
4587092 |
cctttgtaaacactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccaga |
4586993 |
T |
|
| Q |
141 |
tggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
221 |
Q |
| |
|
||||||||| ||| || |||||||| ||||||| ||||||||| | |||||| | ||||||| |||||||||||||| |
|
|
| T |
4586992 |
tggtttaactccaacggatggtgatggtgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcct |
4586912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 185
Target Start/End: Complemental strand, 4572465 - 4572282
Alignment:
| Q |
2 |
aactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctt |
101 |
Q |
| |
|
|||||||||| ||| |||||| | |||||| |||| | ||| ||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||| |
|
|
| T |
4572465 |
aactagcaaaatttcttcaccttagaggttttcacataacctatgtaaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctt |
4572366 |
T |
|
| Q |
102 |
tgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacat |
185 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||||||||| | ||| || || ||||||||||||| ||||||||| |
|
|
| T |
4572365 |
tgatggtttcaccaattttaactttgagagtattccagatggtttatctccaacggatggcgatggcgatgttagtcaagacat |
4572282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4612346 - 4612489
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||||||||| |||| |||||| | ||| || |||| | | || |||||||| ||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
4612346 |
aaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcct |
4612445 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggt |
144 |
Q |
| |
|
||| ||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
4612446 |
ttgttggtttcactgattttacctttgaggctataccagatggt |
4612489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4569570 - 4569360
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||||||||| |||| |||||| | ||| || |||| | ||||||||||||| ||| ||||||||| ||||||||||||||||||| ||| |||| |
|
|
| T |
4569570 |
aaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccgaa----atcacaaacatttgctcaaatcaagaggtccaaaagcct |
4569475 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||||||||||| || ||||||| |||| ||| ||| |||||| || ||||||| | | |
|
|
| T |
4569474 |
ttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaaggttatggtgatattagtcaagaaattgtctctcttgatga |
4569375 |
T |
|
| Q |
201 |
atcaataagaaagaa |
215 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4569374 |
ttcaataagaaagaa |
4569360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 4513647 - 4513755
Alignment:
| Q |
41 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
140 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||| || || || |
|
|
| T |
4513647 |
cctttgttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcctga |
4513746 |
T |
|
| Q |
141 |
tggtttaac |
149 |
Q |
| |
|
||||||||| |
|
|
| T |
4513747 |
tggtttaac |
4513755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4599663 - 4599443
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
|||||||||||| ||| |||||| | ||| || ||| | |||| || ||||| || |||||||||||||| |||||||||||||||||| ||| | |
|
|
| T |
4599663 |
aaactagcaaagattcttcaccttagaggattttacataaccttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctc |
4599564 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
| |||||||| ||||||| |||| ||||| || |||||||||||||| ||| |||| |||||||| |||||||| || |||||| ||||| | | | |
|
|
| T |
4599563 |
gtaatggtttcactgatttttccttcgagactattccagatggtttaactccaatagatggtgatggtgatgttacacaggacataaattctctctgtaa |
4599464 |
T |
|
| Q |
201 |
atcaataagaaagaacttcct |
221 |
Q |
| |
|
|||||| ||||| |||||||| |
|
|
| T |
4599463 |
atcaatcagaaataacttcct |
4599443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4471414 - 4471269
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
|||||||||||||||| |||||| | ||| || |||| | | ||||||||||||||||||||||||||| |||||||| ||||||||| || | |
|
|
| T |
4471414 |
aaactagcaaagcttcttcaccttagaggctttcacataacgtttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctc |
4471315 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggttt |
146 |
Q |
| |
|
||||||||||| ||| |||| |||||||||||| ||| ||||||| |
|
|
| T |
4471314 |
ttgatggtttcactgactttaactttgagaccattccaaatggttt |
4471269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 4255478 - 4255545
Alignment:
| Q |
42 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtt |
109 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
4255478 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgatggtt |
4255545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4462707 - 4462562
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||||| ||| || | |||||| | |||||| |||| | |||||||||||||||||||||||||||| | |||||||| ||||||||| ||| | |
|
|
| T |
4462707 |
aaactaggaaaactacttcaccttagaggttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctc |
4462608 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggttt |
146 |
Q |
| |
|
| ||||||||| ||| |||| |||||||||||| ||| ||||||| |
|
|
| T |
4462607 |
tagatggtttcactgactttaactttgagaccattccaaatggttt |
4462562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 90
Target Start/End: Original strand, 4483534 - 4483568
Alignment:
| Q |
56 |
aatacaatcacaaacgtttgctcaaatcaagaggt |
90 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
4483534 |
aatacaatcacaaacgtttgctcaaatcaagaggt |
4483568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 4496222 - 4496189
Alignment:
| Q |
57 |
atacaatcacaaacgtttgctcaaatcaagaggt |
90 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
4496222 |
atacaatgacaaacgtttgctcaaatcaagaggt |
4496189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 231
Target Start/End: Complemental strand, 1214 - 1031
Alignment:
| Q |
45 |
tgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggt |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||| ||||| ||||||||| |
|
|
| T |
1214 |
tgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggt |
1115 |
T |
|
| Q |
145 |
ttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
231 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||| |||| ||||||| |||||| ||||||||||| |||||| | |||||| |
|
|
| T |
1114 |
ctaacaccactagaaggtgatggtgatgttagtcaa---ctaccttctctttgtcaatctataagaaagaatttccttaaacccttt |
1031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 231
Target Start/End: Complemental strand, 1675977 - 1675794
Alignment:
| Q |
45 |
tgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggt |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||| ||||| ||||||||| |
|
|
| T |
1675977 |
tgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggt |
1675878 |
T |
|
| Q |
145 |
ttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
231 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||| |||| ||||||| |||||| ||||||||||| |||||| | |||||| |
|
|
| T |
1675877 |
ctaacaccactagaaggtgatggtgatgttagtcaa---ctaccttctctttgtcaatctataagaaagaatttccttaaacccttt |
1675794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 16685029 - 16685145
Alignment:
| Q |
115 |
gattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaaga |
214 |
Q |
| |
|
||||||| ||||||||| || ||| |||||||| | ||| || |||||||||||||||| ||||||||||| | |||||| | ||||||| ||||||| |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcagaaaga |
16685128 |
T |
|
| Q |
215 |
acttccttcagcccttt |
231 |
Q |
| |
|
||||||| || |||||| |
|
|
| T |
16685129 |
acttcctccaacccttt |
16685145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1282933 - 1282712
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||||||||| || | |||||| | ||| || ||| | ||||||| || |||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
1282933 |
aaactagcaaaactacttcaccttagaggcttttacataacctttgttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccc |
1282834 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
| ||||||||| |||||||| |||||| ||||| ||||||||| ||||| |||||||||||||||| ||||||| |||| | |||| ||||||| ||| |
|
|
| T |
1282833 |
tagatggtttcactgattttagctttgaaaccatcccagatggtctaacatcactagaaggtgatggtgatgttagtcaacatgtaccttctctttgtca |
1282734 |
T |
|
| Q |
201 |
atcaataagaaagaacttcctt |
222 |
Q |
| |
|
||| ||||||||||| |||||| |
|
|
| T |
1282733 |
atctataagaaagaatttcctt |
1282712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 2324 - 2098
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
|||||||||||||||| |||||| | ||| || |||| | ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |
|
|
| T |
2324 |
aaactagcaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctc |
2225 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcg---atgttactcaagacataccctctctttc |
197 |
Q |
| |
|
|||||||||||| ||||||| ||| ||||| || || ||||||||||| ||| | |||| ||||| | |||||| ||||||||||| |||||||| |
|
|
| T |
2224 |
ttgatggtttcgctgatttttgcttcgagactattcccgatggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttg |
2125 |
T |
|
| Q |
198 |
tcaatcaataagaaagaacttccttca |
224 |
Q |
| |
|
| ||||||| ||||| ||||||||||| |
|
|
| T |
2124 |
taaatcaatcagaaaaaacttccttca |
2098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 2079 - 2305
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
|||||||||||||||| |||||| | ||| || |||| | ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |
|
|
| T |
2079 |
aaactagcaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctc |
2178 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcg---atgttactcaagacataccctctctttc |
197 |
Q |
| |
|
|||||||||||| ||||||| ||| ||||| || || ||||||||||| ||| | |||| ||||| | |||||| ||||||||||| |||||||| |
|
|
| T |
2179 |
ttgatggtttcgctgatttttgcttcgagactattcccgatggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttg |
2278 |
T |
|
| Q |
198 |
tcaatcaataagaaagaacttccttca |
224 |
Q |
| |
|
| ||||||| ||||| ||||||||||| |
|
|
| T |
2279 |
taaatcaatcagaaaaaacttccttca |
2305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 24104595 - 24104364
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||||| |||||||| |||||| | ||| || |||| | |||| || ||||| ||||||||||||||||| |||||| ||||||||| | ||| | |
|
|
| T |
24104595 |
aaactaggaaagcttcttcaccttagaggctttcacataaccttcgtgaacaccgaatacaatcacaaacgcttgctcgaatcaagagatcctaattctc |
24104496 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
||||||||||| |||| |||| |||||||||||||||||||||| |||| ||| | ||||| |||| |||||||||||||||||| | ||||| || |
|
|
| T |
24104495 |
ttgatggtttcaatgactttaactttgagaccataccagatggtctaactccaatggaaggcaatggtgatgttactcaagacatataccctcttgtgca |
24104396 |
T |
|
| Q |
201 |
atcaataagaaagaacttccttcagccctttg |
232 |
Q |
| |
|
|||||| | | |||||||||||||||||||| |
|
|
| T |
24104395 |
atcaatcatgacgaacttccttcagccctttg |
24104364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 3088245 - 3088014
Alignment:
| Q |
1 |
aaactagcaaagcttcgtcacctgaaaggtttgcacacagcctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
100 |
Q |
| |
|
||||||||||| |||| |||||| ||||| || |||| | |||||||||| || |||||||||||||| |||||||| |||||||||||| ||| | |
|
|
| T |
3088245 |
aaactagcaaaacttcttcaccttaaaggctttcacataacctttgtcaataccgaatacaatcacaaccgtttgcttaaatcaagaggttctaattctc |
3088146 |
T |
|
| Q |
101 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
200 |
Q |
| |
|
||||||||||| ||||||| ||||||||| || | ||||||| |||| ||| | |||||| |||| ||||||| ||||||| | | ||||||| ||| |
|
|
| T |
3088145 |
ttgatggtttcactgattttgtctttgagactatccaagatggtctaactccaatggaaggtaatggtgatgttagtcaagacttggcatctctttgtca |
3088046 |
T |
|
| Q |
201 |
atcaataagaaagaacttccttcagccctttg |
232 |
Q |
| |
|
|||| | ||||||||||| |||| ||||||| |
|
|
| T |
3088045 |
atcagttggaaagaacttcattcaaccctttg |
3088014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 3310 - 3379
Alignment:
| Q |
161 |
gtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctt |
230 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||| ||| |||||||||| |
|
|
| T |
3310 |
gtgatggtgatgttactcaagacataccctctcttgttcaatctataagaacgaatttctttcagccctt |
3379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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