View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12527_high_13 (Length: 252)
Name: NF12527_high_13
Description: NF12527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12527_high_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 23367470 - 23367234
Alignment:
| Q |
16 |
gacgcgaatatgaaaaactgcaaatattggaaaactgacgttacatataaaagaaaggaaaatgagaagatgccattcaaaattcaagacacaataaaac |
115 |
Q |
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| T |
23367470 |
gacgcgaatatgaaaaactgcaaatattggaaaactgacgttacatataaaagaaaggaaaatgagaagatgccattcaaaattcaagacacaataaaac |
23367371 |
T |
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| Q |
116 |
taacacatctcaagtaaataacggtagaattcaaaaccaaacaaaatataaagaactgaaaacttaaagttcttgtatcgttgtccattgcaaactttct |
215 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23367370 |
taacacatctcaagtaaataacggtagaattcaaaatcaaacaaaatataaaaaactgaaaacttaaagttcttgtatcgttgtccattgcaaactttct |
23367271 |
T |
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| Q |
216 |
ctaataaacttaaaacaaacaacaaaatgcatacttt |
252 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
23367270 |
ctaataaacttaaaacaaacaacaaaatgcatacttt |
23367234 |
T |
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