View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12528_high_12 (Length: 383)
Name: NF12528_high_12
Description: NF12528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12528_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 340; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 20 - 375
Target Start/End: Complemental strand, 45641544 - 45641189
Alignment:
| Q |
20 |
ataatgccactgaatttcaaaatgagacaggacagaagaaacaccccacaatacagacaaattccatctgaacacaacaaaataaaatcaataatggata |
119 |
Q |
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| T |
45641544 |
ataatgccactgaatttcaaaatgagacaggacagaacaaacacccaacaatacagacaaattccatctgaacacaacaaaataaaatcaataatggata |
45641445 |
T |
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| Q |
120 |
tccaaacattactaatcaatcattcaatcaatgattcaatatgtggattgcattctttggaacaaaaatcattcttctctaataaactcttcaacataga |
219 |
Q |
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| T |
45641444 |
tccaaacattactaatcaatcattcaatcaatgattcaatatgtggattgcattctttggaacaaaaatcattcttctctaataaactcttcaacataga |
45641345 |
T |
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| Q |
220 |
atgagtaaatttaggatcattagggtcactaccagttgacccattagggttttccaatacatttggacgcgaaaaacaaaacttgcaaccaaatccattt |
319 |
Q |
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| T |
45641344 |
atgagtaaatttaggatcattagggtcactactagttgacccattagggttttccaatacatttggacgcgaaaaacaaaacttgcaaccaaatccattt |
45641245 |
T |
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| Q |
320 |
cgagtagtagtactattatgaccctcaccttgaataatcaccaccttacctatgct |
375 |
Q |
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| T |
45641244 |
cgagtagtagtactattatgaccctcaccttgaataatcaccaccttacctctgct |
45641189 |
T |
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