View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12528_low_17 (Length: 326)
Name: NF12528_low_17
Description: NF12528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12528_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 38793261 - 38792956
Alignment:
| Q |
1 |
aagtaacgttggaatttagaacacctcaacacccatctttaggcacaaataattggggaggtgcatcacctttgttagcaaggaacatacccgaggaatc |
100 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38793261 |
aagtaatgttggaatttagaacacctcaacacccatctttaggcacaaataattggggaggtgcatcacctttgttagcaaggaacatacccgaggaatc |
38793162 |
T |
|
| Q |
101 |
acttgaacaaaagtatacaaatctcaacactacacggacccgcgatgagatctttccggctgaatccaatgatttgtactatctcaagcaggatcgtagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |
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| T |
38793161 |
acttgaacaaaagtatacaaatctcaacactacacggacccgcgatgagatctttccggcaaaatccaatgatttgtactatctcaagcagggtcgtagt |
38793062 |
T |
|
| Q |
201 |
gccaatagatcatacaacagaggcatcgcacgggtcagagatctagttatatttaagctaatattttcgcgtaaagagaagagaacaactacgttgggtt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
38793061 |
gccaatagatcatacaacagaggcatcgcacgggtcagagatctagttatatttaagctaatgttttcgcgtaaagagaagagaacaactacgttgggtt |
38792962 |
T |
|
| Q |
301 |
ccaatt |
306 |
Q |
| |
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|||||| |
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| T |
38792961 |
ccaatt |
38792956 |
T |
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