View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12528_low_2 (Length: 607)

Name: NF12528_low_2
Description: NF12528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12528_low_2
NF12528_low_2
[»] chr3 (72 HSPs)
chr3 (19-594)||(13485722-13486286)
chr3 (398-594)||(13490683-13490879)
chr3 (302-389)||(44648512-44648599)
chr3 (300-390)||(790049-790139)
chr3 (302-390)||(25722571-25722659)
chr3 (302-390)||(37225705-37225793)
chr3 (302-390)||(43169289-43169377)
chr3 (300-390)||(38457415-38457503)
chr3 (300-390)||(43580428-43580518)
chr3 (301-390)||(25061659-25061747)
chr3 (301-390)||(27483294-27483382)
chr3 (302-390)||(34059830-34059919)
chr3 (305-390)||(43687996-43688081)
chr3 (301-384)||(2988725-2988809)
chr3 (297-390)||(19552489-19552583)
chr3 (306-390)||(51381683-51381764)
chr3 (317-390)||(26965609-26965682)
chr3 (302-390)||(647702-647789)
chr3 (302-390)||(49470744-49470832)
chr3 (300-390)||(20512607-20512696)
chr3 (308-390)||(41287037-41287119)
chr3 (317-390)||(32304015-32304087)
chr3 (321-389)||(36310361-36310430)
chr3 (301-390)||(54261369-54261458)
chr3 (318-390)||(83267-83339)
chr3 (301-380)||(42886703-42886783)
chr3 (301-364)||(6938194-6938257)
chr3 (303-389)||(36541446-36541533)
chr3 (299-390)||(44645291-44645381)
chr3 (300-390)||(1341030-1341119)
chr3 (305-390)||(36771677-36771763)
chr3 (317-390)||(46363121-46363194)
chr3 (302-390)||(53715985-53716072)
chr3 (302-365)||(3152939-3153001)
chr3 (296-370)||(42791276-42791351)
chr3 (302-365)||(42939923-42939986)
chr3 (303-365)||(42571662-42571724)
chr3 (300-390)||(54933315-54933405)
chr3 (301-390)||(43599931-43600020)
chr3 (306-390)||(3000711-3000795)
chr3 (302-390)||(53560620-53560708)
chr3 (302-369)||(4392150-4392217)
chr3 (302-365)||(33194164-33194226)
chr3 (302-365)||(50038304-50038367)
chr3 (302-365)||(54918066-54918129)
chr3 (305-375)||(4391862-4391932)
chr3 (307-390)||(15514836-15514921)
chr3 (317-390)||(27027702-27027776)
chr3 (307-365)||(30934939-30934997)
chr3 (301-390)||(22730880-22730968)
chr3 (301-365)||(41287632-41287695)
chr3 (309-390)||(42857169-42857252)
chr3 (301-365)||(50088449-50088513)
chr3 (297-365)||(51397959-51398027)
chr3 (198-271)||(6560753-6560823)
chr3 (302-365)||(19115342-19115404)
chr3 (302-365)||(23208422-23208484)
chr3 (351-390)||(35239390-35239429)
chr3 (302-365)||(39168387-39168450)
chr3 (302-365)||(48169401-48169464)
chr3 (302-336)||(2458215-2458249)
chr3 (302-364)||(2662613-2662675)
chr3 (301-363)||(19897230-19897292)
chr3 (340-390)||(31291074-31291124)
chr3 (348-390)||(35099476-35099518)
chr3 (336-390)||(45095542-45095596)
chr3 (317-390)||(2568113-2568185)
chr3 (299-336)||(51398217-51398254)
chr3 (346-390)||(44854314-44854358)
chr3 (321-390)||(50420231-50420302)
chr3 (301-365)||(50646243-50646307)
chr3 (313-365)||(53200813-53200865)
[»] chr5 (63 HSPs)
chr5 (299-390)||(14980149-14980240)
chr5 (302-390)||(166759-166847)
chr5 (309-390)||(793716-793797)
chr5 (302-390)||(36660382-36660470)
chr5 (302-390)||(4751641-4751731)
chr5 (302-390)||(4011746-4011833)
chr5 (302-390)||(29653624-29653712)
chr5 (318-390)||(31889713-31889785)
chr5 (302-390)||(33822613-33822701)
chr5 (300-390)||(38982255-38982345)
chr5 (302-390)||(4742377-4742466)
chr5 (313-390)||(13066680-13066756)
chr5 (317-390)||(27658682-27658755)
chr5 (301-390)||(31557445-31557534)
chr5 (317-390)||(42329656-42329728)
chr5 (302-390)||(4833743-4833831)
chr5 (302-390)||(32690841-32690929)
chr5 (299-390)||(17674160-17674251)
chr5 (313-390)||(4371329-4371406)
chr5 (313-390)||(33585085-33585162)
chr5 (302-390)||(34171119-34171207)
chr5 (292-375)||(24436585-24436668)
chr5 (302-389)||(32963118-32963204)
chr5 (299-365)||(4967548-4967614)
chr5 (302-364)||(15566452-15566514)
chr5 (302-364)||(28797986-28798048)
chr5 (301-365)||(10345068-10345133)
chr5 (301-389)||(12167693-12167782)
chr5 (317-390)||(34919723-34919796)
chr5 (305-365)||(7316985-7317045)
chr5 (318-390)||(41845392-41845464)
chr5 (299-390)||(16886038-16886128)
chr5 (302-357)||(32158527-32158582)
chr5 (300-390)||(36296242-36296332)
chr5 (304-390)||(39059764-39059849)
chr5 (313-390)||(12992031-12992107)
chr5 (301-365)||(2729922-2729986)
chr5 (302-390)||(7731703-7731790)
chr5 (346-390)||(27810345-27810389)
chr5 (302-365)||(42104199-42104263)
chr5 (302-365)||(3025067-3025130)
chr5 (317-390)||(8961121-8961193)
chr5 (353-390)||(15400177-15400214)
chr5 (299-336)||(15567120-15567157)
chr5 (329-390)||(28316695-28316756)
chr5 (301-390)||(28640036-28640125)
chr5 (301-365)||(1969511-1969575)
chr5 (296-380)||(15776599-15776682)
chr5 (297-365)||(39566132-39566200)
chr5 (296-359)||(7735963-7736025)
chr5 (317-380)||(36073751-36073813)
chr5 (303-365)||(14620630-14620692)
chr5 (302-368)||(19087382-19087448)
chr5 (302-336)||(27600601-27600635)
chr5 (295-365)||(31055684-31055754)
chr5 (299-365)||(39504673-39504739)
chr5 (344-390)||(43257961-43258007)
chr5 (301-361)||(7144791-7144851)
chr5 (299-335)||(14979960-14979996)
chr5 (313-365)||(21319446-21319498)
chr5 (302-365)||(34446163-34446226)
chr5 (302-334)||(39566392-39566424)
chr5 (304-364)||(43584514-43584574)
[»] chr2 (53 HSPs)
chr2 (301-390)||(4536527-4536616)
chr2 (302-390)||(4766298-4766385)
chr2 (301-390)||(1360129-1360219)
chr2 (300-390)||(29795300-29795390)
chr2 (301-390)||(43388767-43388856)
chr2 (302-387)||(45372645-45372731)
chr2 (297-390)||(33093317-33093410)
chr2 (302-390)||(1298890-1298978)
chr2 (298-390)||(4840837-4840928)
chr2 (302-390)||(34225728-34225815)
chr2 (295-390)||(2459720-2459815)
chr2 (305-390)||(19505934-19506018)
chr2 (297-365)||(29396816-29396884)
chr2 (303-390)||(775995-776081)
chr2 (300-390)||(18374874-18374965)
chr2 (308-390)||(43344331-43344412)
chr2 (313-390)||(6591931-6592007)
chr2 (301-390)||(14378334-14378422)
chr2 (313-390)||(14697977-14698054)
chr2 (302-390)||(24775143-24775231)
chr2 (301-365)||(37724200-37724264)
chr2 (302-365)||(681898-681961)
chr2 (301-364)||(38809566-38809629)
chr2 (298-380)||(36177926-36178008)
chr2 (313-390)||(25332536-25332613)
chr2 (302-390)||(45148062-45148153)
chr2 (301-365)||(4132977-4133041)
chr2 (317-388)||(1381719-1381790)
chr2 (297-365)||(441367-441436)
chr2 (308-365)||(17702979-17703036)
chr2 (317-390)||(41984388-41984460)
chr2 (302-390)||(10580968-10581055)
chr2 (313-365)||(43427423-43427475)
chr2 (348-390)||(7743401-7743443)
chr2 (302-380)||(34546452-34546529)
chr2 (304-365)||(4051840-4051901)
chr2 (301-390)||(16316663-16316751)
chr2 (313-390)||(39866783-39866860)
chr2 (299-363)||(12394059-12394123)
chr2 (302-365)||(13561947-13562011)
chr2 (302-365)||(16792439-16792500)
chr2 (297-365)||(35799152-35799220)
chr2 (299-365)||(11188628-11188692)
chr2 (302-365)||(12342047-12342110)
chr2 (302-365)||(17695961-17696023)
chr2 (307-390)||(42969858-42969941)
chr2 (299-365)||(6247672-6247738)
chr2 (313-390)||(14511427-14511502)
chr2 (302-364)||(22620471-22620533)
chr2 (300-365)||(777722-777787)
chr2 (301-365)||(27964506-27964573)
chr2 (301-365)||(18719568-18719632)
chr2 (300-336)||(42743233-42743269)
[»] chr7 (58 HSPs)
chr7 (295-390)||(22597178-22597273)
chr7 (302-390)||(17869192-17869280)
chr7 (302-390)||(40298802-40298890)
chr7 (301-390)||(42121504-42121593)
chr7 (302-390)||(19288458-19288546)
chr7 (300-390)||(1103436-1103527)
chr7 (295-390)||(32275152-32275247)
chr7 (302-365)||(40799945-40800008)
chr7 (302-390)||(18733408-18733496)
chr7 (302-390)||(40207488-40207576)
chr7 (302-388)||(19906368-19906455)
chr7 (307-390)||(36836019-36836102)
chr7 (301-364)||(36912061-36912124)
chr7 (313-390)||(28044242-28044318)
chr7 (301-390)||(43813455-43813544)
chr7 (302-390)||(30514928-30515016)
chr7 (300-390)||(22627457-22627547)
chr7 (295-365)||(35778453-35778523)
chr7 (296-390)||(42044090-42044184)
chr7 (301-390)||(5722957-5723046)
chr7 (296-380)||(18292282-18292367)
chr7 (302-390)||(32345946-32346035)
chr7 (313-390)||(36447181-36447257)
chr7 (317-390)||(41906044-41906117)
chr7 (296-380)||(12977805-12977889)
chr7 (302-390)||(26963434-26963522)
chr7 (313-390)||(10684941-10685018)
chr7 (307-390)||(32873274-32873359)
chr7 (294-390)||(36447712-36447809)
chr7 (322-390)||(3681033-3681101)
chr7 (301-388)||(30833206-30833292)
chr7 (302-365)||(44057734-44057797)
chr7 (307-365)||(2296997-2297055)
chr7 (308-390)||(42259658-42259740)
chr7 (299-390)||(33056385-33056480)
chr7 (314-390)||(18886636-18886712)
chr7 (302-365)||(19105135-19105199)
chr7 (313-365)||(34274759-34274811)
chr7 (307-365)||(715997-716054)
chr7 (317-390)||(29001652-29001725)
chr7 (299-365)||(44567175-44567241)
chr7 (353-390)||(19920382-19920419)
chr7 (317-390)||(40804995-40805067)
chr7 (302-365)||(1741946-1742008)
chr7 (302-341)||(48684671-48684710)
chr7 (300-390)||(31416862-31416952)
chr7 (294-336)||(32345738-32345780)
chr7 (307-389)||(47271686-47271767)
chr7 (301-365)||(6747179-6747244)
chr7 (299-336)||(19906621-19906658)
chr7 (299-328)||(31929777-31929806)
chr7 (343-384)||(42753703-42753744)
chr7 (301-365)||(45948764-45948829)
chr7 (301-365)||(46120390-46120456)
chr7 (300-364)||(4268563-4268627)
chr7 (317-365)||(18270546-18270594)
chr7 (302-365)||(22297952-22298013)
chr7 (302-365)||(27947635-27947699)
[»] chr4 (73 HSPs)
chr4 (301-390)||(29840025-29840114)
chr4 (302-388)||(31817289-31817375)
chr4 (308-390)||(50072238-50072320)
chr4 (304-390)||(51930553-51930639)
chr4 (302-390)||(39671194-39671283)
chr4 (302-390)||(44855193-44855281)
chr4 (299-390)||(21045105-21045195)
chr4 (307-390)||(52732555-52732638)
chr4 (296-390)||(56556366-56556461)
chr4 (298-390)||(28116192-28116284)
chr4 (302-390)||(15501258-15501347)
chr4 (300-390)||(19282523-19282615)
chr4 (302-390)||(32141075-32141164)
chr4 (302-390)||(6461960-6462048)
chr4 (302-390)||(43421228-43421316)
chr4 (302-365)||(4505291-4505354)
chr4 (300-390)||(30022018-30022107)
chr4 (301-390)||(45520570-45520659)
chr4 (298-390)||(17317956-17318050)
chr4 (299-390)||(34124243-34124334)
chr4 (311-365)||(32980027-32980081)
chr4 (317-390)||(6510084-6510157)
chr4 (302-390)||(17499830-17499919)
chr4 (300-365)||(22220499-22220564)
chr4 (308-390)||(24259566-24259650)
chr4 (317-390)||(37445626-37445699)
chr4 (314-390)||(1868211-1868286)
chr4 (302-390)||(4408291-4408379)
chr4 (302-390)||(35928442-35928530)
chr4 (302-390)||(51434370-51434458)
chr4 (302-365)||(1819517-1819579)
chr4 (317-388)||(3093319-3093390)
chr4 (304-390)||(6232147-6232233)
chr4 (303-365)||(49080616-49080678)
chr4 (305-362)||(30105875-30105932)
chr4 (313-390)||(36805556-36805633)
chr4 (337-390)||(47321130-47321183)
chr4 (299-364)||(52915683-52915748)
chr4 (300-380)||(25231127-25231207)
chr4 (307-390)||(31941514-31941597)
chr4 (302-390)||(32141236-32141323)
chr4 (315-390)||(34095978-34096054)
chr4 (301-390)||(45903518-45903611)
chr4 (313-365)||(50317723-50317775)
chr4 (299-390)||(6231605-6231696)
chr4 (301-388)||(28653030-28653116)
chr4 (302-365)||(37624511-37624573)
chr4 (302-365)||(52253799-52253862)
chr4 (307-390)||(55548336-55548418)
chr4 (308-390)||(19849037-19849123)
chr4 (313-390)||(22212304-22212380)
chr4 (317-390)||(45889531-45889602)
chr4 (299-361)||(47817687-47817751)
chr4 (301-365)||(19878602-19878665)
chr4 (301-365)||(26934584-26934648)
chr4 (302-365)||(49089415-49089481)
chr4 (323-390)||(31987276-31987343)
chr4 (299-365)||(51733634-51733701)
chr4 (317-380)||(52848179-52848242)
chr4 (302-365)||(54711007-54711070)
chr4 (302-365)||(10573294-10573359)
chr4 (302-380)||(24940833-24940911)
chr4 (302-390)||(44835288-44835373)
chr4 (299-365)||(52957930-52957996)
chr4 (308-365)||(7906136-7906193)
chr4 (300-365)||(19930666-19930731)
chr4 (317-390)||(54233812-54233885)
chr4 (300-336)||(31941760-31941796)
chr4 (307-359)||(34359982-34360033)
chr4 (297-365)||(37654360-37654427)
chr4 (338-390)||(38692401-38692453)
chr4 (301-365)||(54042323-54042387)
chr4 (308-365)||(56555842-56555901)
[»] chr8 (45 HSPs)
chr8 (299-390)||(35052422-35052513)
chr8 (301-389)||(18666632-18666720)
chr8 (302-390)||(22601090-22601178)
chr8 (302-390)||(1774170-1774258)
chr8 (302-390)||(7612452-7612540)
chr8 (302-390)||(8471235-8471323)
chr8 (301-389)||(27416455-27416542)
chr8 (302-390)||(38329140-38329228)
chr8 (301-390)||(14541856-14541946)
chr8 (313-390)||(7129266-7129343)
chr8 (313-390)||(29931342-29931418)
chr8 (295-390)||(41790228-41790321)
chr8 (301-390)||(2803348-2803436)
chr8 (296-365)||(39463207-39463276)
chr8 (302-390)||(9022349-9022437)
chr8 (301-390)||(26438929-26439016)
chr8 (317-390)||(36915337-36915409)
chr8 (313-390)||(45187395-45187472)
chr8 (300-364)||(11165480-11165544)
chr8 (302-390)||(27109931-27110019)
chr8 (302-390)||(30788889-30788977)
chr8 (302-390)||(33870709-33870796)
chr8 (302-365)||(15160582-15160645)
chr8 (310-390)||(42946082-42946164)
chr8 (313-390)||(16208914-16208992)
chr8 (348-390)||(34461695-34461737)
chr8 (302-384)||(37559650-37559732)
chr8 (302-390)||(156197-156283)
chr8 (305-385)||(39970279-39970362)
chr8 (301-365)||(39698802-39698865)
chr8 (313-365)||(39765995-39766047)
chr8 (302-365)||(396350-396412)
chr8 (317-380)||(7839427-7839490)
chr8 (299-390)||(13108939-13109030)
chr8 (313-375)||(11335808-11335869)
chr8 (301-390)||(5588584-5588672)
chr8 (301-390)||(11257495-11257584)
chr8 (317-390)||(32061534-32061607)
chr8 (302-389)||(3203287-3203368)
chr8 (313-365)||(40362400-40362452)
chr8 (351-390)||(34168316-34168355)
chr8 (353-390)||(8382588-8382625)
chr8 (313-365)||(9812138-9812190)
chr8 (305-365)||(17920913-17920973)
chr8 (313-365)||(29312329-29312380)
[»] chr1 (69 HSPs)
chr1 (302-384)||(15647177-15647259)
chr1 (305-390)||(44582890-44582975)
chr1 (302-390)||(84604-84692)
chr1 (306-390)||(12851699-12851783)
chr1 (306-390)||(38132278-38132361)
chr1 (302-390)||(9552440-9552528)
chr1 (299-390)||(43929635-43929727)
chr1 (313-390)||(48259964-48260043)
chr1 (302-390)||(50349966-50350056)
chr1 (301-390)||(2458961-2459050)
chr1 (313-390)||(24041111-24041188)
chr1 (302-390)||(1430623-1430710)
chr1 (302-390)||(12002200-12002288)
chr1 (297-390)||(15698861-15698956)
chr1 (302-390)||(17806485-17806573)
chr1 (302-365)||(30685480-30685543)
chr1 (302-389)||(45377261-45377348)
chr1 (308-390)||(5317687-5317769)
chr1 (301-390)||(255024-255113)
chr1 (313-390)||(43755018-43755095)
chr1 (297-390)||(49894755-49894848)
chr1 (299-390)||(17919930-17920022)
chr1 (302-390)||(44024499-44024587)
chr1 (317-387)||(26252086-26252157)
chr1 (304-390)||(28751518-28751605)
chr1 (312-365)||(11065970-11066023)
chr1 (302-390)||(22664895-22664981)
chr1 (300-365)||(34032214-34032279)
chr1 (301-390)||(11650009-11650100)
chr1 (302-390)||(50158417-50158504)
chr1 (303-370)||(672397-672464)
chr1 (300-390)||(5854336-5854426)
chr1 (318-387)||(1428837-1428905)
chr1 (296-365)||(29567844-29567913)
chr1 (313-389)||(43105692-43105768)
chr1 (301-365)||(48025388-48025452)
chr1 (301-365)||(50249263-50249327)
chr1 (302-390)||(11134571-11134661)
chr1 (302-365)||(28411265-28411328)
chr1 (302-384)||(24483343-24483424)
chr1 (308-361)||(12484766-12484819)
chr1 (300-365)||(32807072-32807137)
chr1 (313-390)||(40061007-40061082)
chr1 (301-365)||(29523405-29523469)
chr1 (318-365)||(26352215-26352262)
chr1 (302-365)||(31491904-31491967)
chr1 (313-383)||(26755185-26755255)
chr1 (308-365)||(4471552-4471609)
chr1 (317-390)||(6332135-6332208)
chr1 (300-365)||(27720911-27720975)
chr1 (308-365)||(38646106-38646163)
chr1 (301-365)||(5463529-5463592)
chr1 (300-364)||(28200361-28200425)
chr1 (313-390)||(44583733-44583814)
chr1 (300-336)||(49468619-49468655)
chr1 (296-335)||(50158224-50158263)
chr1 (299-361)||(13408403-13408465)
chr1 (302-365)||(44258641-44258706)
chr1 (325-390)||(42650360-42650424)
chr1 (302-387)||(43738367-43738452)
chr1 (301-357)||(7375242-7375298)
chr1 (317-365)||(12591216-12591264)
chr1 (305-365)||(14373547-14373607)
chr1 (346-390)||(26582923-26582967)
chr1 (302-354)||(30006105-30006157)
chr1 (302-365)||(34047369-34047433)
chr1 (319-390)||(35149491-35149563)
chr1 (301-365)||(44557178-44557241)
chr1 (301-365)||(52293325-52293388)
[»] chr6 (35 HSPs)
chr6 (301-390)||(1924774-1924863)
chr6 (302-390)||(29915494-29915583)
chr6 (302-390)||(31275752-31275840)
chr6 (301-389)||(19689945-19690034)
chr6 (302-390)||(29927162-29927249)
chr6 (301-388)||(23936694-23936781)
chr6 (301-390)||(32258675-32258764)
chr6 (298-390)||(17345246-17345337)
chr6 (303-380)||(4850616-4850693)
chr6 (313-390)||(6143050-6143126)
chr6 (302-390)||(12828791-12828882)
chr6 (313-390)||(30627057-30627133)
chr6 (307-388)||(34439525-34439606)
chr6 (302-390)||(26189462-26189550)
chr6 (312-390)||(10494872-10494948)
chr6 (313-390)||(6140566-6140642)
chr6 (317-370)||(28554735-28554788)
chr6 (302-365)||(29399900-29399963)
chr6 (309-390)||(4123965-4124045)
chr6 (300-376)||(19416810-19416887)
chr6 (301-380)||(17246728-17246805)
chr6 (302-365)||(233988-234051)
chr6 (301-390)||(8052299-8052387)
chr6 (299-380)||(10540629-10540710)
chr6 (325-390)||(30626846-30626911)
chr6 (302-363)||(34519263-34519324)
chr6 (337-390)||(34576533-34576586)
chr6 (301-365)||(9940601-9940665)
chr6 (346-390)||(11785212-11785255)
chr6 (301-365)||(24163850-24163913)
chr6 (351-390)||(3015919-3015958)
chr6 (319-390)||(4132085-4132155)
chr6 (351-390)||(26669208-26669247)
chr6 (293-365)||(12063646-12063719)
chr6 (296-365)||(26405396-26405465)
[»] scaffold0580 (2 HSPs)
scaffold0580 (302-390)||(1595-1685)
scaffold0580 (302-390)||(9334-9424)
[»] scaffold0047 (1 HSPs)
scaffold0047 (301-390)||(70565-70654)
[»] scaffold0189 (1 HSPs)
scaffold0189 (301-390)||(13169-13258)
[»] scaffold0003 (1 HSPs)
scaffold0003 (307-390)||(321687-321768)
[»] scaffold0332 (1 HSPs)
scaffold0332 (302-365)||(3946-4009)
[»] scaffold0194 (1 HSPs)
scaffold0194 (295-390)||(8096-8200)
[»] scaffold0010 (1 HSPs)
scaffold0010 (301-365)||(153265-153330)
[»] scaffold0754 (1 HSPs)
scaffold0754 (300-352)||(6749-6801)
[»] scaffold0294 (1 HSPs)
scaffold0294 (301-384)||(3621-3704)
[»] scaffold0119 (1 HSPs)
scaffold0119 (351-390)||(1546-1585)
[»] scaffold0110 (1 HSPs)
scaffold0110 (302-365)||(24876-24939)
[»] scaffold0060 (1 HSPs)
scaffold0060 (297-390)||(31573-31667)
[»] scaffold0072 (1 HSPs)
scaffold0072 (353-390)||(12182-12219)
[»] scaffold0013 (1 HSPs)
scaffold0013 (308-365)||(45354-45411)
[»] scaffold0565 (1 HSPs)
scaffold0565 (297-365)||(9777-9845)
[»] scaffold0048 (1 HSPs)
scaffold0048 (313-365)||(62598-62650)


Alignment Details
Target: chr3 (Bit Score: 484; Significance: 0; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 19 - 594
Target Start/End: Complemental strand, 13486286 - 13485722
Alignment:
Q  19 aattgtagttcctcacaatttcaaacagcagcgataaaagagccttcatttattatattatttggtcaagcattccaataaatatgttaatttgggatcc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13486286 aattgtagttcctcacaatttcaaacagcagcgataaaagagccttcatttattatattattcggtcaagcattccaataaatatgttaatttgggatcc 13486187  T
Q  119 ttaaatcattagaaactaaatcatgtaaaacactaactttcaagcaaagcaaaatacagcacctgcaactctcagtatgcaaacaaaagtgactcgaaac 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13486186 ttaaatcattagaaactaaatcatgtaaaacactaactttcaagcaaagcaaaatacagcacctgcaactctcagtatgcaaacaaaagtgactcgaaac 13486087  T
Q  219 attgactgttgttttcatgtctgcagggaattctgcttcccaattttcatcaatatccttattttttaatttctgttatttaatactccctccatttcaa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  13486086 attgactgttgttttcatgtctgcagggaattctgcttcccaatttacatcaatatccttattttttaatttctgttatttaatactccctcagtttcaa 13485987  T
Q  319 aatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaannnnnnncacagaattcgtgtctaagtt 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||    
T  13485986 aatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttttcacagaattcgtgtctaagtt 13485887  T
Q  419 cctgtctcttcgtgatgactcaacctcactgcacaacctagtgtttggctgccatgaaattgtggaccctttcctactcacaagaattttgcaatacgct 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13485886 cctgtctcttcgtgatgactcaacctcactgcacaacctagtgtttggctgccatgaaattgtggacccttgcctactcacaagaattttgcaatacgct 13485787  T
Q  519 gtttcaaacaatgtccgtaaattaagaatccttactagatgtgatattcatcgctttccgacttgcttattttcat 594  Q
    |||||| ||||||        ||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  13485786 gtttcacacaatg--------ttaagaatccttactagatg---tattcatcgctttccgacttgcttattttcat 13485722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 398 - 594
Target Start/End: Complemental strand, 13490879 - 13490683
Alignment:
Q  398 cacagaattcgtgtctaagttcctgtctcttcgtgatgactcaacctcactgcacaacctagtgtttggctgccatgaaattgtggaccctttcctactc 497  Q
    ||||||||||||||||||| |  ||||||||||||||| |||||||||||||||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  13490879 cacagaattcgtgtctaaggttatgtctcttcgtgatgcctcaacctcactgcacaatctagagtttcgctgccatgacattgtggaccctttcctactc 13490780  T
Q  498 acaagaattttgcaatacgctgtttcaaacaatgtccgtaaattaagaatccttactagatgtgatattcatcgctttccgacttgcttattttcat 594  Q
    ||||| |||||| |||||||||||||| |||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  13490779 acaagtattttggaatacgctgtttcacacaatgtccgtagattaaaaatccttactaggtgtgatattcaacgctttccgacttgcttattttcat 13490683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 44648599 - 44648512
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    |||||||||| ||||||||||||||||  ||||||||||| || |||||| ||||||||||||| |||||||||||||||||||||||    
T  44648599 tactccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaatgtcactttacatttccaatacaacttta 44648512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 300 - 390
Target Start/End: Original strand, 790049 - 790139
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| ||| |||||||||||||||| ||||| | |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  790049 aatactccgtccgtttcaaaatgagtgtccctttaaccaaaaaaatttgtttcaaaattaatgtcactttacatttccaatacaactttaa 790139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 25722659 - 25722571
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||||| ||||||| |||| || || ||||||||||||||||| ||||||||| ||||||||||||||    
T  25722659 tactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaattatttcaaaatgaatgtcactttacattttcaatacaactttaa 25722571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 37225793 - 37225705
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||||||||||||  |||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  37225793 tactccctccgttttaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 37225705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 43169289 - 43169377
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| |||||||||||| ||||||  |||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  43169289 tactccctccgttttaaaatgagtgtcgctttagtcaaaaaaaattgtttcaaaatgaatgtcattttacatttccaatacaactttaa 43169377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 300 - 390
Target Start/End: Original strand, 38457415 - 38457503
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| || |||||||||||||||||||||||||||||| ||  ||||||||||||||| ||| ||||||||| ||||||||||||||    
T  38457415 aatactccatcaatttcaaaatgagtgtcactttagcaaaaaaaa--tgtttcaaaatgaatatcattttacattttcaatacaactttaa 38457503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 300 - 390
Target Start/End: Original strand, 43580428 - 43580518
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||||| |||||||||||| ||| ||||||| |||| ||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  43580428 aatacttcctccgtttcaaaatgagcgtcgctttagccaaaaaaatttgtttcaaaataaatgtcactttacattttcaatacaactttaa 43580518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 25061659 - 25061747
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| |||||||||||||||||||||||| |||| |||| |||| |||||||||| || ||||||||||||||||||||||||    
T  25061659 atactccttccgtttcaaaatgagtgtcactttagccaaaaaaatt-gttttaaaatgaatgccactttacatttccaatacaactttaa 25061747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 27483382 - 27483294
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| |||||||||||||||| ||||| |||||| || | |||||||||||||||||| ||||||||||||||||||||||||    
T  27483382 atactccttccgtttcaaaatgagtgtcgctttaacaaaaaaaaat-gtttcaaaatgaatgtcactttacatttccaatacaactttaa 27483294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 34059830 - 34059919
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| | ||| ||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  34059830 tactccctacgttttaaaatgagtgtcactttagtcaaaaaaaatttgttttaaaatgaatgtcattttacattttcaatacaactttaa 34059919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 43688081 - 43687996
Alignment:
Q  305 tccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||||||||||||||||  ||||||||||| || ||||| |||||| ||||||| ||||||||||||||||||||||||    
T  43688081 tccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgttccaaaataaatgtcactttacatttccaatacaactttaa 43687996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 384
Target Start/End: Complemental strand, 2988809 - 2988725
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaa 384  Q
    ||||||||||| |||||||||||||||| ||||| |||||| ||  |||||||||||||||||||| ||||||||||||||||||    
T  2988809 atactccctccgtttcaaaatgagtgtcgctttatcaaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaa 2988725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 19552489 - 19552583
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagc-aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| |||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  19552489 tttactactccttccgttttaaaataagtgtcattttagctaaaaacaatttgttttaaaatgaatgtcactttacattttcaatacaactttaa 19552583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 51381683 - 51381764
Alignment:
Q  306 ccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||||||||||||   |||||| || |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  51381683 ccctccatttcaaaatgagtgtcactt---caaaaaaaaattgtttcaaaataaatgtcactttacatttacaatacaactttaa 51381764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 26965682 - 26965609
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||||| |||| |  |||||||||||||||||||| ||||||||| ||||||||||||||    
T  26965682 aaaatgagtgtcactttagccaaaaaatattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 26965609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 647789 - 647702
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||||||||||| | |||| ||||||||| |||||| || ||| ||||||||| ||||||||||||||    
T  647789 tactccctccgtttcaaaatgagtgtcactttaaccaaaaaaatttgtttaaaaatg-atatcattttacattttcaatacaactttaa 647702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 49470744 - 49470832
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||| ||| ||||| |||||| |||||||||||| || |||||||||||||||||||  ||||||||| ||||||||||||||    
T  49470744 tactctctccgttttaaaataagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcgttttacattttcaatacaactttaa 49470832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 20512696 - 20512607
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||| ||||||||||||||||  |||||| |||| |||| |||||||||||||||||  ||||||||| |||| |||||||||    
T  20512696 aatactccctccgtttcaaaatgagtgtcgttttagccaaaaaaatt-gtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 20512607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 41287037 - 41287119
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| |||||||||||||||| ||||||| |||| || || ||| |||||| |||||| ||||||||||||||||||||||||    
T  41287037 ctccgtttcaaaatgagtgtcgctttagctaaaaaaaattattttaaaatggatgtcactttacatttccaatacaactttaa 41287119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 32304087 - 32304015
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||||| |||| |||||||||  |||||||||||| ||||||||| ||||||||||||||    
T  32304087 aaaatgagtgtcactttagccaaaa-aatttgttttgaaatgaatgtcactttacattttcaatacaactttaa 32304015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 36310430 - 36310361
Alignment:
Q  321 tgagtgtcactttagc-aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    |||||||||||||||| ||||| || |||||||||||| ||||||| |||||||||||||||||||||||    
T  36310430 tgagtgtcactttagctaaaaaaaaattgtttcaaaataaatgtcattttacatttccaatacaacttta 36310361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 54261369 - 54261458
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||||||||||||||||  |||||| |||| || ||||||||||||||| |||  ||||||||| |||| |||||||||    
T  54261369 atactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaacgtcgctttacattttcaatgcaactttaa 54261458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 390
Target Start/End: Original strand, 83267 - 83339
Alignment:
Q  318 aaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||||||||||| ||||  | |||||||||||||||||||| ||||||||| ||||||||||||||    
T  83267 aaatgagggtcactttagctaaaaataattgtttcaaaatgaatgtcattttacattttcaatacaactttaa 83339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 380
Target Start/End: Original strand, 42886703 - 42886783
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    ||||||||||| |||||||||||||||| |||||| |||||| || |||||||||||||||||| | |||| |||||||||    
T  42886703 atactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaaattgtttcaaaatgaatgttactttaaatttccaat 42886783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 6938257 - 6938194
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    ||||||||||| |||||||||||||||| |||||| ||||| ||||||||| ||||||||||||    
T  6938257 atactccctccgtttcaaaatgagtgtcgctttagtaaaaaaaatttgttttaaaatgaatgtc 6938194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 36541446 - 36541533
Alignment:
Q  303 actccctccatttcaaaatgagtgtcactttagcaaaaacaatttgttt-caaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    ||||||||| |||||||||||||||| ||||||  |||  ||||||||| |||||||||||||  ||||||||| |||||||||||||    
T  36541446 actccctccgtttcaaaatgagtgtcgctttagttaaagaaatttgttttcaaaatgaatgtcgttttacattttcaatacaacttta 36541533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 44645291 - 44645381
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| ||| ||||||||||||||||  ||||||||||| || || ||||||||||||||||  ||||||||||| || |||||||||    
T  44645291 taatactccatccgtttcaaaatgagtgtcgttttagcaaaaa-aaattatttcaaaatgaatgtcgctttacatttcccatgcaactttaa 44645381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 1341119 - 1341030
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| | ||| ||||||||||||| |||||  |||| ||||| ||| ||||||||||||| ||||||||| ||||||||||||||    
T  1341119 aatactcccttcgttttaaaatgagtgtcattttagtcaaaa-aatttattttaaaatgaatgtcactttacattttcaatacaactttaa 1341030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 36771763 - 36771677
Alignment:
Q  305 tccctccatttcaaaatgagtgtcactttagcaaaaacaa-tttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| |||| |||||| ||||||| ||||| || ||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  36771763 tccctccgttttaaaaagagtgttactttagtaaaaaaaaatttgttttaaaatgaatgtcactttacatttacaatacaactttaa 36771677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 46363194 - 46363121
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||  ||||||  |||| || |||||||||||||||||||| ||||||||| ||||||||||||||    
T  46363194 aaaatgagtgttgctttagttaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 46363121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 53715985 - 53716072
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||  ||| ||||||||||||| |||| |||||| || | |||| ||||||||||| | ||||||||||||||||||||||||    
T  53715985 tactccctctgttttaaaatgagtgtcattttaacaaaaaaaaat-gttttaaaatgaatgttactttacatttccaatacaactttaa 53716072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 3153001 - 3152939
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||| ||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  3153001 tactccctccgttttaaaatgagtgtcattttagcaaaaa-aaattgtttcaaaatgaatgtca 3152939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 370
Target Start/End: Original strand, 42791276 - 42791351
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtcagttta 370  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||||| || || ||||||||| ||||||| ||||    
T  42791276 atttagtactccctccgtttcaaaatgagtgtcactttagccaaaaaaaaattatttcaaaatcaatgtcacttta 42791351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 42939923 - 42939986
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| ||| ||| |||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  42939923 tactccatccgttttaaaatgagtgtcgctttaacaaaaataatttgtttcaaaatgaatgtca 42939986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 42571724 - 42571662
Alignment:
Q  303 actccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||| |||| |||||||||||||||| ||||||| |||| || ||||||||||||||||||||    
T  42571724 actcgctccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtca 42571662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 54933405 - 54933315
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| ||| ||| ||||| | |||| |||||   |||| || |||||||||||||||||||| |||||||||||||| |||||||||    
T  54933405 aatactccatccgttttaaaataaatgtcgctttattcaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatgcaactttaa 54933315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 43600020 - 43599931
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| |||||||||||| || |||||||  |||  ||||||||||||||||||||||  |||||||||   ||||||||||||    
T  43600020 atactccttccgtttcaaaatgagggttactttagtcaaacaaatttgtttcaaaatgaatgtcgttttacatttttcatacaactttaa 43599931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 3000711 - 3000795
Alignment:
Q  306 ccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| | ||| ||||||||||||| ||||| |  |||||| ||||||||||| | ||||||||| ||||||||||||||    
T  3000711 ccctccgtttgataatcagtgtcactttagtaaaaaaatattgttttaaaatgaatgttactttacattttcaatacaactttaa 3000795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 53560620 - 53560708
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||||| ||||||||||| |||  ||||||  |||| ||||||||||||||| ||||||  ||||||||| |||| |||||||||    
T  53560620 tacttcctccgtttcaaaatgaatgttgctttagtcaaaaaaatttgtttcaaaataaatgtcgttttacatttacaatgcaactttaa 53560708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 369
Target Start/End: Original strand, 4392150 - 4392217
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagttt 369  Q
    |||| ||||| ||| ||||||||||||  |||||||||||  | ||||||||||||||||||||||||    
T  4392150 tactacctccgttttaaaatgagtgtcgttttagcaaaaaataattgtttcaaaatgaatgtcagttt 4392217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 33194226 - 33194164
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||| ||||||||||||  ||||||||||| || |||||| |||||||||||||    
T  33194226 tactccctccattttaaaatgagtgtcgttttagcaaaaa-aaattgttttaaaatgaatgtca 33194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 50038367 - 50038304
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||| |||| ||| |||||||||||| |||||||||||| || |||||| |||||||||||||    
T  50038367 tactctctccgttttaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtca 50038304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 54918066 - 54918129
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||||||||||| ||| || |||| || ||||||||||||||| ||||    
T  54918066 tactccctccgtttcaaaatgagtgtcatttttgccaaaaaaaattgtttcaaaatgaaagtca 54918129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 4391862 - 4391932
Alignment:
Q  305 tccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacattt 375  Q
    ||||||| ||||| | ||| |||||||||||| |||| ||||||||| ||||||||| ||| |||||||||    
T  4391862 tccctccgtttcatactgaatgtcactttagccaaaaaaatttgttttaaaatgaatatcactttacattt 4391932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 15514921 - 15514836
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaat--ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||||| ||||||||| | ||||||||||| ||   ||||||  |||| ||||||| ||||||||||||||||||||||||    
T  15514921 cctccgtttcataatgagtgtgagtttagcaaaaaaaaaaattgttttcaaataaatgtcactttacatttccaatacaactttaa 15514836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 27027702 - 27027776
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||||||  ||||||||||| ||  |||||||||||| ||||||| |||||||||||||||||| |||||    
T  27027702 aaaataagtgtcgttttagcaaaaaaaaaattgtttcaaaattaatgtcaatttacatttccaatacaaatttaa 27027776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 365
Target Start/End: Complemental strand, 30934997 - 30934939
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||||||||||||  |||||| |||| || |||||| |||||||||||||    
T  30934997 cctccatttcaaaatgagtgtcgttttagctaaaaaaaattgttttaaaatgaatgtca 30934939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 22730880 - 22730968
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| |||  |||||||||| ||||   ||||| |||| |||| |||| ||| ||||||||| ||||||||||||||||||||||||    
T  22730880 atactccatccgcttcaaaatgaatgtcgtattagccaaaaaaatt-gttttaaactgaatgtcaatttacatttccaatacaactttaa 22730968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 41287695 - 41287632
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||||||| ||||||  |||||| |||| || ||||||||||||||||||||    
T  41287695 atactccctccgtttcaaaataagtgtcgttttagccaaaa-aaattgtttcaaaatgaatgtca 41287632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 42857252 - 42857169
Alignment:
Q  309 tccatttcaaaatgagtgtcactttagcaaaaacaatt--tgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||||||| ||||||||||||||||| ||    ||||| |||| |||||||| ||||||||||| ||||||| ||||    
T  42857252 tccattttaaaatgaatgtcactttagcaaaaaaaaaaaatgttttaaaaggaatgtcactttacatttcccatacaacattaa 42857169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 50088513 - 50088449
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| ||| ||||||||||||||||  ||||||||||| || |||||| |||||||| ||||    
T  50088513 atactccttccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaacgtca 50088449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 51397959 - 51398027
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||| ||| ||||||||||||  |||||| |||| || |||||||||||| |||||||    
T  51397959 tttaatactccatccgttttaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaataaatgtca 51398027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 6560753 - 6560823
Alignment:
Q  198 caaacaaaagtgactcgaaacattgactgttgttttcatgtctgcagggaattctgcttcccaattttcatcaa 271  Q
    |||| ||||| |||| |||||||||||||||   |||| |||||||||||| | ||||||||| ||||||||||    
T  6560753 caaagaaaagcgacttgaaacattgactgtt---ttcacgtctgcagggaaatttgcttcccacttttcatcaa 6560823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 19115342 - 19115404
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||| |||||||| ||| ||||||| |||| |||| ||||||||||||||||||    
T  19115342 tactccctccgttttaaaatgagcgtcgctttagccaaaaaaatt-gtttcaaaatgaatgtca 19115404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 23208484 - 23208422
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||| ||||||||  |||||| |||| |||| ||||||||||||||||||    
T  23208484 tactccctccgtttcaaattgagtgtcgttttagctaaaaaaatt-gtttcaaaatgaatgtca 23208422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 35239390 - 35239429
Alignment:
Q  351 tcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  35239390 tcaaaatgaatgtcactttacatttctaatacaactttaa 35239429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 39168387 - 39168450
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||| |||||| || ||  ||||||||||| || || |||||||||||||||||    
T  39168387 tactccctccattttaaaatgggtatcgttttagcaaaaaaaaattatttcaaaatgaatgtca 39168450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 48169401 - 48169464
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||  ||| |||||||||||||||||| || ||| | ||| |||||||||||||||||    
T  48169401 tactccctctgttttaaaatgagtgtcactttaacacaaatagtttatttcaaaatgaatgtca 48169464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 2458249 - 2458215
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagc 336  Q
    |||||||||| ||||||||||||||||||||||||    
T  2458249 tactccctccgtttcaaaatgagtgtcactttagc 2458215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 2662675 - 2662613
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    ||||| |||| ||| |||||||||||| ||||||| ||||  |||||||| ||||||||||||    
T  2662675 tactcgctccgttttaaaatgagtgtcgctttagccaaaaagatttgttttaaaatgaatgtc 2662613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 363
Target Start/End: Original strand, 19897230 - 19897292
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgt 363  Q
    ||||||||||||||| ||||||||||||| |||||||| |  || |||||| ||||| |||||    
T  19897230 atactccctccattttaaaatgagtgtcattttagcaacatgaaattgttttaaaataaatgt 19897292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 390
Target Start/End: Complemental strand, 31291124 - 31291074
Alignment:
Q  340 aacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| | ||||||||| ||| |||||||||| |||||||||||||    
T  31291124 aacaatttgtcttaaaatgaatatcactttacatttctaatacaactttaa 31291074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 35099518 - 35099476
Alignment:
Q  348 gtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||    
T  35099518 gtttcataataaatgtcattttacatttccaatacaactttaa 35099476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 390
Target Start/End: Original strand, 45095542 - 45095596
Alignment:
Q  336 caaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| || || ||| ||||||||||||| ||||||||| ||||||||||||||    
T  45095542 caaaaaaaaattattttaaaatgaatgtcactttacattttcaatacaactttaa 45095596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 2568185 - 2568113
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| |||| ||||||  |||| |||| |||| ||||||||||| | ||||||||| ||||||||||||||    
T  2568185 aaaatgaatgtcgctttagtcaaaaaaatt-gttttaaaatgaatgttactttacattttcaatacaactttaa 2568113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 51398254 - 51398217
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagc 336  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  51398254 taatactccctccgtttcaaaatgagtgtcgctttagc 51398217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 44854314 - 44854358
Alignment:
Q  346 ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||| |||| ||||||||| |||||||| |||||    
T  44854314 ttgtttcaaaatgaacgtcactttacattttcaatacaattttaa 44854358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 50420231 - 50420302
Alignment:
Q  321 tgagtgtcactttagc--aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||| |  ||||| || |||||| ||||| ||||||| |||||||||  |||||||||||||    
T  50420231 tgagtgtcactttaactaaaaaataaattgtttaaaaataaatgtcattttacatttttaatacaactttaa 50420302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 50646307 - 50646243
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| ||| ||| ||||||||||||  |||| |||||| || |||||||||||| |||||||    
T  50646307 atactccttccgttttaaaatgagtgtcgttttaacaaaaaaaaattgtttcaaaataaatgtca 50646243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 53200865 - 53200813
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||  ||||||||||| || |||||| |||||||||||||    
T  53200865 tttcaaaatgaatgtcgttttagcaaaaaaaaattgttttaaaatgaatgtca 53200813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 14980240 - 14980149
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14980240 taatactccctccgtttcaaaatgagagtcactttagctaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 14980149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 166847 - 166759
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||||| |||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  166847 tactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 166759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 793797 - 793716
Alignment:
Q  309 tccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  793797 tccatttcaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 793716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 36660382 - 36660470
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| | |||||||||||||||||||||||| |||| || |||||||||||||||||||| ||||||||| ||||||||||||||    
T  36660382 tactcccttcgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 36660470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 4751731 - 4751641
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaat--ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||||| |||||||||||| |||  |||||||||||||||||||| |||| ||||| |||||||||||||    
T  4751731 tactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaataattgtttcaaaatgaatgtcactttatatttctaatacaactttaa 4751641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 4011833 - 4011746
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||||||||||||| |||| || |||||| |||||||| |||| ||||||||||| ||||||||||||    
T  4011833 tactccctccttttcaaaatgagtgtcactttagctaaaa-aaattgttttaaaatgaacgtcactttacatttccgatacaactttaa 4011746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 29653712 - 29653624
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||||||||||||  |||| |||||| || ||||| |||||||||||||| ||||||||||||||||||||||||    
T  29653712 tactccctccgttttaaaatgagtgtcgttttaacaaaaaaaaattgttgcaaaatgaatgtcattttacatttccaatacaactttaa 29653624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 318 - 390
Target Start/End: Original strand, 31889713 - 31889785
Alignment:
Q  318 aaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||| ||||| || |||||||||||| ||||||| ||||||||||||||||||||||||    
T  31889713 aaatgagtgtcactttagtaaaaaaaaattgtttcaaaataaatgtcactttacatttccaatacaactttaa 31889785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 33822701 - 33822613
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||||||||||||| |||||||||  |||| || ||| |||||||||||||||| ||||||||| ||||||||||||||    
T  33822701 tactccctccgtttcaaaatgagtatcactttagtcaaaaaaaattgattcaaaatgaatgtcactttacattttcaatacaactttaa 33822613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 38982345 - 38982255
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||| ||| ||||| |||||||||||||||||| |||| || |||||| ||||||||||||| |||| |||||||||||||||||||    
T  38982345 aatattccttccgtttcataatgagtgtcactttagctaaaaaaaattgttttaaaatgaatgtcactttatatttccaatacaactttaa 38982255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 4742466 - 4742377
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaaca-atttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||||| |||||| ||||| | | |||||||||||||||||||| |||| ||||| |||||||||||||    
T  4742466 tactccctccgtttcaaaatgagtgtcgctttagaaaaaaaataattgtttcaaaatgaatgtcactttatatttctaatacaactttaa 4742377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 13066680 - 13066756
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||||||||||||| | |||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  13066680 tttcacaatgagtgtcactttaactaaaaaaatt-gtttcaaaatgaatgtcattttacatttccaatacaactttaa 13066756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 27658755 - 27658682
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||| |||||| ||||| || |||||||||||||||||||| ||||||||||||||| ||||||||    
T  27658755 aaaatgagtgtcgctttagtaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatataactttaa 27658682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 31557534 - 31557445
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||||||| ||||||| ||| |||||||  |||| || |||||||||||||||||||| ||||||||| ||||||||||||||    
T  31557534 atactccttccattttaaaatgattgttactttagttaaaaaaaattgtttcaaaatgaatgtcattttacattttcaatacaactttaa 31557445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 42329728 - 42329656
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||||||  ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  42329728 aaaatgagtgtcactttattaaaaaaaatt-gtttcaaaatgaatgtcactttacatttccaatacaactttaa 42329656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 4833831 - 4833743
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||| ||||||| |||| |||||||||||| || ||||||||||||||||||   ||||||||| |||| |||||||||    
T  4833831 tactccctccattttaaaatgaatgtcgctttagcaaaaaaaaattgtttcaaaatgaatgttgctttacattttcaatgcaactttaa 4833743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 32690929 - 32690841
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| | ||||| |||||| ||||| |||| ||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  32690929 tactccctccgttttataatgaatgtcacattagcgaaaaaaatttatttcaaaatgaatgtcactttacatttcaaatacaactttaa 32690841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 17674160 - 17674251
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| ||| |||||||||||||||||||  |||  || |||||||||||||||||||| ||||| ||| ||||| ||||||||    
T  17674160 taatactccctccgttttaaaatgagtgtcactttagtcaaataaaattgtttcaaaatgaatgtcactttacgttttcaataaaactttaa 17674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 4371329 - 4371406
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| || |||||| || |||| || ||||||||||||||| |||| ||||||||||||||||||||||||    
T  4371329 tttcaaaatgactgccactttggccaaaaaaaattgtttcaaaatgaacgtcactttacatttccaatacaactttaa 4371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 33585162 - 33585085
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||||||||  |||| || |||||| |||||||| |||| ||||||||| ||||||||||||||    
T  33585162 tttcaaaatgagtgtcactttagataaaaaaaattgttttaaaatgaacgtcactttacattttcaatacaactttaa 33585085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 34171119 - 34171207
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||||||||| ||||||||||||  ||||  ||||| || |||||| ||||||||||||| ||||||||| ||||||||||||||    
T  34171119 tacttcctccattttaaaatgagtgtcgttttataaaaaaaaaattgttttaaaatgaatgtcactttacattttcaatacaactttaa 34171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 24436668 - 24436585
Alignment:
Q  292 tgttatttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacattt 375  Q
    ||||||||  ||||| |||||||||||||  |||||| ||||||| |||  ||||||||||||||||||||||| |||||||||    
T  24436668 tgttattttctactctctccatttcaaaacaagtgtcgctttagccaaacaaatttgtttcaaaatgaatgtcactttacattt 24436585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 32963204 - 32963118
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    |||||| ||| ||| |||||||||||||||||||  |||| | |||||||||||||||||  || |||||||||||||||||||||||    
T  32963204 tactccatccgttttaaaatgagtgtcactttagtcaaaa-agtttgtttcaaaatgaataccactttacatttccaatacaacttta 32963118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 4967614 - 4967548
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||| ||||||||||||||||| |||| |||||| || |||||| |||||||||||||    
T  4967614 taatactccctccgtttcaaaatgagtgtcattttaacaaaaaaaaattgttttaaaatgaatgtca 4967548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 15566452 - 15566514
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    |||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  15566452 tactccctccgttttaaaatgagtgtcgctttagcaaaaaaaatttgtttcaaaataaatgtc 15566514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 28797986 - 28798048
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    |||||||| | |||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  28797986 tactcccttcgtttcaaaatgagtgtctctttagcaaaaaatatttgtttcaaaatgaatgtc 28798048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 10345133 - 10345068
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| |||||||||||||||| |||||| |||||| || ||||||||||||||||||||    
T  10345133 atactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaaattgtttcaaaatgaatgtca 10345068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 12167782 - 12167693
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    ||||||||||  ||||||||||| |||| |||||||||||| ||  |||||| ||||||||||||| | ||||||| |||||||||||||    
T  12167782 atactccctcagtttcaaaatgaatgtcgctttagcaaaaaaaaaattgttttaaaatgaatgtcactctacattttcaatacaacttta 12167693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 34919723 - 34919796
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| ||| |||||||||||| || |||||||||||||||||||| |||||||| | |||| ||||||||    
T  34919723 aaaatgagcgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttacattcctaatataactttaa 34919796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 305 - 365
Target Start/End: Original strand, 7316985 - 7317045
Alignment:
Q  305 tccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| ||| |||||||||||| |||||||||||| || ||||||||||||||||||||    
T  7316985 tccctccgttttaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtca 7317045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 318 - 390
Target Start/End: Complemental strand, 41845464 - 41845392
Alignment:
Q  318 aaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| ||||| |||| ||| | ||||||||||||||||| ||||||||| |||||||| |||||    
T  41845464 aaatgagtgtcaccttagccaaaaaaatatatttcaaaatgaatgtcactttacattttcaatacaattttaa 41845392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 16886038 - 16886128
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||||||||||| ||||| |||||||||||||| |||| || || |||||||||||| |||  ||| ||||| ||||||||||||||    
T  16886038 taatattccctccattttaaaattagtgtcactttagccaaaa-aaattatttcaaaatgaacgtcgctttgcattttcaatacaactttaa 16886128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 357
Target Start/End: Original strand, 32158527 - 32158582
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaat 357  Q
    |||||||||| |||||||||||||||| ||||||| |||| |||||||||||||||    
T  32158527 tactccctccgtttcaaaatgagtgtcgctttagctaaaaaaatttgtttcaaaat 32158582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 36296332 - 36296242
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||  ||| ||| |||||||||||| |||||| ||||| || |||||| ||||||||| ||  ||| ||||||||||||||||||||    
T  36296332 aatactctatccgttttaaaatgagtgtcgctttagtaaaaaaaaattgttttaaaatgaatatcgctttccatttccaatacaactttaa 36296242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 304 - 390
Target Start/End: Original strand, 39059764 - 39059849
Alignment:
Q  304 ctccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||| |||||||||||| ||| |  ||||| |||| ||||||||||||||||   ||||||||| ||||||||||||||    
T  39059764 ctccctccattttaaaatgagtgtcgcttaactaaaaaaaatt-gtttcaaaatgaatgttgctttacattttcaatacaactttaa 39059849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 12992031 - 12992107
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| || ||||||||||||  | |||| |||| |||||||||||||||||| |||||||||| |||||||||||||    
T  12992031 tttcacaacgagtgtcactttgactaaaaaaatt-gtttcaaaatgaatgtcattttacatttctaatacaactttaa 12992107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 2729986 - 2729922
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||||||||||||||  |||| | |||| || ||||||||||||||||||||    
T  2729986 atactccctccgtttcaaaatgagtgtcgttttaaccaaaaaaacttgtttcaaaatgaatgtca 2729922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 7731790 - 7731703
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| |||| ||||| |||||||||||||  |||| |||| |||| ||||||||||||| |||| |||| ||| ||||||||||    
T  7731790 tactccctctattttaaaataagtgtcactttagtcaaaaaaatt-gttttaaaatgaatgtcactttatattttcaaaacaactttaa 7731703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 27810345 - 27810389
Alignment:
Q  346 ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||    
T  27810345 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 27810389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 42104263 - 42104199
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||||||||||  ||||| |||||| || ||||||||||||||||||||    
T  42104263 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaaattgtttcaaaatgaatgtca 42104199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 3025130 - 3025067
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| ||| ||||||||| |||||| ||||||| |||| || ||||||||||||||||||||    
T  3025130 tactccatccgtttcaaaataagtgtcgctttagctaaaaaaaattgtttcaaaatgaatgtca 3025067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 8961193 - 8961121
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||||  |||| || || |||||||||| |||||| |||||| ||||||| |||||||||    
T  8961193 aaaatgagtgtcactttaggcaaaa-aaattatttcaaaatggatgtcactttacaattccaatgcaactttaa 8961121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 353 - 390
Target Start/End: Original strand, 15400177 - 15400214
Alignment:
Q  353 aaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  15400177 aaaatgaatgtcactttacatttccaatacaactttaa 15400214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 15567157 - 15567120
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagc 336  Q
    |||||||||||||||||||||||||||||| |||||||    
T  15567157 taatactccctccatttcaaaatgagtgtcgctttagc 15567120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 329 - 390
Target Start/End: Original strand, 28316695 - 28316756
Alignment:
Q  329 actttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| |||||| || |||||||||||| ||||||| |||| |||| ||||||||||||||    
T  28316695 actttaacaaaaaaaaattgtttcaaaataaatgtcattttatattttcaatacaactttaa 28316756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 28640036 - 28640125
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||| | |||||||||| ||| ||| |||| || || ||| ||||| ||||||| ||||||||| |||| |||||||||    
T  28640036 atactccctccgttttataatgagtgtcgcttcagccaaaaaaaattattttaaaataaatgtcactttacattttcaattcaactttaa 28640125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 1969575 - 1969511
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| ||| ||| |||||||||  | |||||||||||| ||||||||||||||||| |||||    
T  1969575 atactccatccgttttaaaatgagtaccgctttagcaaaaataatttgtttcaaaatgagtgtca 1969511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 380
Target Start/End: Complemental strand, 15776682 - 15776599
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    ||||| ||||| |||| ||| ||||||||||||| ||||| ||||| || |||||| ||||||||||||| |||  |||||||||    
T  15776682 atttactactctctccgttttaaaatgagtgtcattttagtaaaaa-aaattgttttaaaatgaatgtcacttttgatttccaat 15776599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 39566132 - 39566200
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||| |||||| ||||||| ||||||||||||  ||||||  ||| ||||||||| |||||||||||||    
T  39566132 tttagtactccatccattttaaaatgagtgtcgttttagcccaaaaaatttgttttaaaatgaatgtca 39566200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 359
Target Start/End: Original strand, 7735963 - 7736025
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatga 359  Q
    |||| ||||||| ||| ||||||||||||||||| ||||||||||| || |||||| |||||||    
T  7735963 attttatactccttccgtttcaaaatgagtgtcattttagcaaaaataa-ttgttttaaaatga 7736025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 36073813 - 36073751
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    ||||||||||||||||| ||||||| || ||||||| |||||||||||| |||| |||| ||||    
T  36073813 aaaatgagtgtcactttggcaaaaa-aaattgtttctaaatgaatgtcattttaaattttcaat 36073751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 14620692 - 14620630
Alignment:
Q  303 actccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||| ||| ||||||||||||||||  |||||| |||| || || |||||||||||||||||    
T  14620692 actccatccgtttcaaaatgagtgtcgttttagccaaaaaaaattatttcaaaatgaatgtca 14620630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 368
Target Start/End: Original strand, 19087382 - 19087448
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtt 368  Q
    |||||| | ||||||||||| || |||| |||| | |||| ||||||||||||||| ||||||||||    
T  19087382 tactcctttcatttcaaaataagcgtcattttaactaaaaaaatttgtttcaaaataaatgtcagtt 19087448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 27600635 - 27600601
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagc 336  Q
    |||||||||||||| ||||||||||||||||||||    
T  27600635 tactccctccattttaaaatgagtgtcactttagc 27600601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 31055684 - 31055754
Alignment:
Q  295 tatttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| |||||| ||| ||||||||| ||||||| |||||| |||| || || ||| |||||||||||||    
T  31055684 tatttattactccatccgtttcaaaataagtgtcattttagccaaaaaaaattattttaaaatgaatgtca 31055754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 39504673 - 39504739
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||||||||||||| | ||||  |||||  |||| || |||||| |||||||||||||    
T  39504673 taatactccctccatttcaaaataaatgtcgttttagttaaaaaaaattgttttaaaatgaatgtca 39504739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 344 - 390
Target Start/End: Complemental strand, 43258007 - 43257961
Alignment:
Q  344 atttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||| ||||||||||||| ||||||||||||||| ||||||||    
T  43258007 atttattttaaaatgaatgtcactttacatttccaatataactttaa 43257961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 7144791 - 7144851
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaat 361  Q
    ||||||| ||| ||| ||||||||| || ||||| |||||| ||||| |||||||||||||    
T  7144791 atactccatccgttttaaaatgagtatcgctttaacaaaaataatttatttcaaaatgaat 7144851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 14979960 - 14979996
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttag 335  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  14979960 taatactccctccgtttcaaaatgagtgtcgctttag 14979996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 21319498 - 21319446
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||| ||  |||||  |||| |||||||||||||||||||||||    
T  21319498 tttcaaaatgagtatcgttttagtcaaaaaaatttgtttcaaaatgaatgtca 21319446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 34446226 - 34446163
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||| ||||||||  ||||||||||| ||  ||||||||||||||||||||    
T  34446226 tactccctccgtttcaaa-tgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtca 34446163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 39566424 - 39566392
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcacttta 334  Q
    ||||||||||||||||||||||||||| |||||    
T  39566424 tactccctccatttcaaaatgagtgtcgcttta 39566392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 43584574 - 43584514
Alignment:
Q  304 ctccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    |||||||  ||||||||||||| || ||||||| |||| || |||||| ||||||||||||    
T  43584574 ctccctctgtttcaaaatgagtatcgctttagctaaaaaaaattgttttaaaatgaatgtc 43584514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 3e-31; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 4536527 - 4536616
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| |||||||||||||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  4536527 atactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 4536616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 4766385 - 4766298
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  4766385 tactccatccgtttcaaaatgagtgtcactttagcaaaaa-aatctgtttcaaaatgaatgtcaatttacattttcaatacaactttaa 4766298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 1360129 - 1360219
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||| ||||||||||||||||||||    
T  1360129 atactccatccgtttcaaaatgagtgtcactttagcaaaaaaaaaattgtttcaaaatgaatgtcactttgcatttccaatacaactttaa 1360219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 29795390 - 29795300
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| ||| ||| ||||||| |||||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  29795390 aatactccatccgttttaaaatgaatgtcactttagccaaaaatatttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29795300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 43388856 - 43388767
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||||||  ||||||||| |||| |||||||||    
T  43388856 atactccctccgtttcaaaatgagtgtcattttagccaaaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 43388767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 45372731 - 45372645
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagca-aaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactt 387  Q
    |||||||||||||||||||||| ||||||||||||| |||| || |||||| ||||||||||||| ||||||||| |||||||||||    
T  45372731 tactccctccatttcaaaatgaatgtcactttagcaaaaaaaaaattgttttaaaatgaatgtcactttacattttcaatacaactt 45372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 33093317 - 33093410
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| |||||||||| ||| |||||||||||| ||||  | |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  33093317 tttattactccctccgttttaaaatgagtgtctctttgactaaaaaaatttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 33093410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 1298978 - 1298890
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||||| |||||  ||||| || || ||||||||||||||||| |||||||||| |||||||||||||    
T  1298978 tactccctccgtttcaaaatgagtgtcgctttaataaaaaaaaattatttcaaaatgaatgtcactttacatttctaatacaactttaa 1298890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 4840928 - 4840837
Alignment:
Q  298 ttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||||||||||||||||  ||||| ||||| |||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  4840928 ttaatactccatccgtttcaaaatgagtgtcgttttagaaaaaaaaatt-gttccaaaatgaatgtcactttacatttccaatacaactttaa 4840837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 34225728 - 34225815
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| | |||||||||||||||| ||||||| |||| |||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  34225728 tactcccttcgtttcaaaatgagtgtcgctttagccaaaaaaatt-gtttcaaaatgaatgtcactttacattttcaatacaactttaa 34225815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 2459720 - 2459815
Alignment:
Q  295 tatttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||||||||||| ||| |||||||||||  |||||||||||| || |||||| ||||||||||||  |||||||||||||| |||||||||    
T  2459720 tattttatactccctccgttttaaaatgagtgttgctttagcaaaaaaaaattgttttaaaatgaatgtcgctttacatttccaatgcaactttaa 2459815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 305 - 390
Target Start/End: Original strand, 19505934 - 19506018
Alignment:
Q  305 tccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| |||||||||||||||||| | |||| ||||||||||||||| ||||||| |||| ||| |||||||||||||||    
T  19505934 tccctccattttaaaatgagtgtcactttaactaaaaaaatttgtttcaaaataaatgtcacttta-attcccaatacaactttaa 19506018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 29396884 - 29396816
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||||||||||||||||||||| ||||||  |||| || ||||||||||||||||||||    
T  29396884 tttaatactccctccatttcaaaatgagtgtcgctttagtcaaaaaaaattgtttcaaaatgaatgtca 29396816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 390
Target Start/End: Complemental strand, 776081 - 775995
Alignment:
Q  303 actccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||  ||||||||| |||| |||||||||    
T  776081 actccatccgtttcaaaatgagtgtcgctttagcaaaaaaaatt-gtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 775995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 18374965 - 18374874
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaa-aacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||| ||||||||||||| || |||||||||| || || |||||| ||||||||||||| ||||||||||||||| || |||||    
T  18374965 aatactccctccgtttcaaaatgagtttcgctttagcaaacaaaaaattgtttgaaaatgaatgtcactttacatttccaatataattttaa 18374874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 308 - 390
Target Start/End: Complemental strand, 43344412 - 43344331
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||  ||| |||| ||||||||||||||    
T  43344412 ctccgtttcaaaatgagtgtcattttagcaaaaaaaatt-gtttcaaaatgaatgtcaccttatattttcaatacaactttaa 43344331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 6591931 - 6592007
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||| |||||||| |||| |||| |||| ||||||||| ||| ||||||||||||||||||||||||    
T  6591931 tttcaaaatgagtgttactttagccaaaaaaatt-gttttaaaatgaatatcattttacatttccaatacaactttaa 6592007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 14378422 - 14378334
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| |||||||||||||||| |||||||||||| || |  ||| ||||||||||||| ||||||||| ||||||||||||||    
T  14378422 atactccttccgtttcaaaatgagtgtcgctttagcaaaaaaaaatatttt-aaaatgaatgtcactttacattttcaatacaactttaa 14378334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 14697977 - 14698054
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||||  ||||||||||| || |||||||||||||||||||  ||||||||| |||| |||||||||    
T  14697977 tttcaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 14698054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 24775143 - 24775231
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||||| ||||||||||| || ||| |||| ||||||||| ||||||| ||||| ||||||||| |||||||| |||||    
T  24775143 tactccctccgtttcataatgagtgtcatttgagccaaaaaaatttgttttaaaatgattgtcactttacattttcaatacaattttaa 24775231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 37724200 - 37724264
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  37724200 atactccctccgttttaaaatgagtgtcgctttagcaaaaataatttgtttcaaaataaatgtca 37724264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 681961 - 681898
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||||||||||||||||| ||||| |||||  ||||||||| |||||||||||||    
T  681961 tactccctccatttcaaaatgagtgtctctttatcaaaataaatttgtttgaaaatgaatgtca 681898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 38809566 - 38809629
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    ||||||||||||||||||||||||||||  |||||| |||| || |||||||||||||||||||    
T  38809566 atactccctccatttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtc 38809629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 298 - 380
Target Start/End: Original strand, 36177926 - 36178008
Alignment:
Q  298 ttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    |||||||||| | | ||||||||||||||||  ||||||||||| || |||||||||||||||||||| ||| | ||||||||    
T  36177926 ttaatactccattcgtttcaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttccgtttccaat 36178008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 25332536 - 25332613
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| |||| ||||| |||||| |||||||||||||||||| |||   ||||||||||||| |||||||||    
T  25332536 tttcaaaatgattgtcgctttaacaaaaaaaatttgtttcaaaatgaacgtcgccttacatttccaatgcaactttaa 25332613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 45148153 - 45148062
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagc---aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||||||||||||||||||||||     ||||| || |||||| ||||||||||||| ||||||||| ||||| ||||||||    
T  45148153 tactccctccgtttcaaaatgagtgtcactttaattaaaaaaaaaaattgttttaaaatgaatgtcactttacattttcaataaaactttaa 45148062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 4132977 - 4133041
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||||||||||||||  |||||| |||| || ||||||||||||||||||||    
T  4132977 atactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtca 4133041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 388
Target Start/End: Original strand, 1381719 - 1381790
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttt 388  Q
    |||||||||||| |||||| ||||| || |||||| ||||||||||| | ||||||||||||||| ||||||    
T  1381719 aaaatgagtgtcgctttagtaaaaaaaaattgttttaaaatgaatgttactttacatttccaatataacttt 1381790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 441436 - 441367
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||||| ||||||||| ||||||  ||||| |||||| || ||||||||||||||||||||    
T  441436 tttaatactccctccgtttcaaaataagtgtcgttttagccaaaaaaaaattgtttcaaaatgaatgtca 441367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 365
Target Start/End: Original strand, 17702979 - 17703036
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||| |||||||||||||||| ||||| |||||| ||||||||| |||||||||||||    
T  17702979 ctccgtttcaaaatgagtgtcgctttaacaaaaataatttgttttaaaatgaatgtca 17703036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 41984388 - 41984460
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||| |||||| |||||||||| |||||||||| ||| ||  ||||||||| ||||||||||||||    
T  41984388 aaaatgagtgtcgctttagtaaaaacaatt-gtttcaaaataaatatcgctttacattttcaatacaactttaa 41984460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 10581055 - 10580968
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||||| ||| ||||||||||||  |||||| |||| || |||||||||||||||| ||| |||| |||| ||||||||||||||    
T  10581055 tacttcctccgttttaaaatgagtgtcg-tttagccaaaaaaaattgtttcaaaatgaatatcactttatattttcaatacaactttaa 10580968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 43427475 - 43427423
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||||||    
T  43427475 tttcaaaatgagtgtcgctttagacaaaaaaatttgtttcaaaatgaatgtca 43427423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 7743401 - 7743443
Alignment:
Q  348 gtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  7743401 gttttaaaatgaatgtcactttacatttccaatacaactttaa 7743443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 34546529 - 34546452
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    |||||||||| ||||||||||||||||  |||| | |||| |||| |||||||||||||||||| |||  |||||||||    
T  34546529 tactccctccgtttcaaaatgagtgtcgttttaaccaaaaaaatt-gtttcaaaatgaatgtcactttcaatttccaat 34546452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 4051901 - 4051840
Alignment:
Q  304 ctccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||| ||| ||||||| |||||||||||  |||| || ||||||||||||||||||||    
T  4051901 ctccctccgttttaaaatgattgtcactttagtcaaaaaaaattgtttcaaaatgaatgtca 4051840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 16316663 - 16316751
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||| |  ||||  |||||||||||||||| ||  | ||||||| ||||||||| |||| |||||||||||||||||||    
T  16316663 atactccctccgttttacgatgaaggtcactttagcaaaaa-aacatatttcaaattgaatgtcactttatatttccaatacaactttaa 16316751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 39866860 - 39866783
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| |||||| |||||||||||| |  || ||| ||||||||||||  |||||||||||||| ||| |||||    
T  39866860 tttcaaaataagtgtcgctttagcaaaaaaacattattttaaaatgaatgtcgctttacatttccaatgcaaatttaa 39866783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 12394123 - 12394059
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgt 363  Q
    |||||||| |||| ||||||||||||||||  |||||  |||| || ||||||||||||||||||    
T  12394123 taatactctctccgtttcaaaatgagtgtcgttttaggcaaaaaaaattgtttcaaaatgaatgt 12394059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 13561947 - 13562011
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| ||| ||||||||||||||||| ||||| |||||  ||||||||||||||| |||||||    
T  13561947 tactccatccgtttcaaaatgagtgtcattttagccaaaataaatttgtttcaaaataaatgtca 13562011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 16792439 - 16792500
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| ||| ||| |||||||||||| |||||||||||  || ||||||||||||||||||||    
T  16792439 tactccatccgttttaaaatgagtgtcgctttagcaaaa--aaattgtttcaaaatgaatgtca 16792500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 35799152 - 35799220
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||| |||||||||  ||| ||||||| ||||| ||||||||||| || |||||||||||| |||||||    
T  35799152 tttactactccctctgttttaaaatgaatgtcattttagcaaaaaaaaattgtttcaaaataaatgtca 35799220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 11188692 - 11188628
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||| ||| ||| ||||||||||||| ||||||||||  || || |||||||||||||||||    
T  11188692 taatactccttccgttttaaaatgagtgtcattttagcaaaa--aaattatttcaaaatgaatgtca 11188628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 12342047 - 12342110
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| ||| ||||||||||||||||  |||| | |||| || ||||||||||||||||||||    
T  12342047 tactccttccgtttcaaaatgagtgtcgttttaaccaaaaaaaattgtttcaaaatgaatgtca 12342110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 17696023 - 17695961
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||| | |||||||||||||||| ||||||| |||| || |||||||||||||| |||||    
T  17696023 tactcccttcgtttcaaaatgagtgtcgctttagccaaaa-aaattgtttcaaaatgagtgtca 17695961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 42969858 - 42969941
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| |||| ||||| |||||||||||||| ||||  |||| ||| ||||| ||||||| |||||||||  ||||| |||||||    
T  42969858 cctcaattttaaaataagtgtcactttagccaaaaatatttattttaaaataaatgtcactttacatttttaataccactttaa 42969941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 6247672 - 6247738
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||| ||| ||||||||||||  ||| || |||| || |||||| |||||||||||||    
T  6247672 taatactccctccgttttaaaatgagtgtcgttttcgccaaaaaaaattgttttaaaatgaatgtca 6247738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 14511427 - 14511502
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||||||||||||||  ||||  || ||||||||||||||||||  |||||||||  |||||||| ||||    
T  14511427 tttcataatgagtgtcactttagtcaaaa--atatgtttcaaaatgaatgtctctttacattttgaatacaacattaa 14511502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 22620533 - 22620471
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    |||||||||| ||| |||||||||||  |||||||||||  || |||||||||||||| ||||    
T  22620533 tactccctccgttttaaaatgagtgttgctttagcaaaataaagttgtttcaaaatgagtgtc 22620471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 777722 - 777787
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| || | ||| ||| ||||||||| |||||| ||||||| |||||| |||||||||||||    
T  777722 aatactctcttcgttttaaagtgagtgtcattttagccaaaacaaattgttttaaaatgaatgtca 777787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 27964573 - 27964506
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttag---caaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||||||||||||||  |||||   |||||| ||| |||||| ||||||||||||    
T  27964573 atactccctccgtttcaaaatgagtgtcgttttagcaacaaaaaaaatatgtttcgaaatgaatgtca 27964506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 18719632 - 18719568
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||  || ||||||||||||| |||||| |||| || ||||||  ||||||||||||    
T  18719632 atactccctcccctttaaaatgagtgtcattttagccaaaaaaaattgttttgaaatgaatgtca 18719568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 42743269 - 42743233
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagc 336  Q
    |||||||||||||||| |||||||||||| |||||||    
T  42743269 aatactccctccattttaaaatgagtgtcgctttagc 42743233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 5e-30; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 22597178 - 22597273
Alignment:
Q  295 tatttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  22597178 tatttactactctctccgtttcaaaatgagtgtcactttagccaaaagaatttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 22597273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 17869192 - 17869280
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  17869192 tactccctccgttttaaaatgagtgtcactttagcgaaaaaaatttgtttcaaaatgaatgtcattttacatttccaatgcaactttaa 17869280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 40298802 - 40298890
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||||||||||||| |||| || |||||||||||||||||||| ||||||||| ||||||||||||||    
T  40298802 tactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 40298890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 42121504 - 42121593
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||| ||||||| ||||||||||||||||| || |||||||||||||||||||| |||| |||||||||||||||||||    
T  42121504 atactccctccgttttaaaatgaatgtcactttagcaaaaaaaaattgtttcaaaatgaatgtcactttatatttccaatacaactttaa 42121593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 19288546 - 19288458
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||||||||||||||||||||||| ||||| || || ||||||||||||||||| |||||||||| |||||||||||||    
T  19288546 tactccctccgtttcaaaatgagtgtcactttagtaaaaaaaaattatttcaaaatgaatgtcactttacatttctaatacaactttaa 19288458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 300 - 390
Target Start/End: Original strand, 1103436 - 1103527
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaa-aaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| ||| ||||| |||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1103436 aatactccatccgtttcataatgagtgtcactttagccagaaaaaatttgtttcaaaatgaatgtcattttacatttccaatacaactttaa 1103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 32275152 - 32275247
Alignment:
Q  295 tatttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||||||| ||| |||||||||| ||||||||||||| |||| || ||||||||||||||||| || |||||||||| |||||||||||||    
T  32275152 tattttatactccatccgtttcaaaatgtgtgtcactttagctaaaaaaaattgtttcaaaatgaatgccactttacatttctaatacaactttaa 32275247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 40799945 - 40800008
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40799945 tactccctccgtttcaaaatgagtgtcactttagcaaaaataatttgtttcaaaatgaatgtca 40800008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 18733408 - 18733496
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||| |||||||||||| ||||||| |||| || |||||||||||||||||||| ||||||||| ||||||||||||||    
T  18733408 tactccatccgttttaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 18733496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 40207576 - 40207488
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||||||||||||| |||| || ||| |||||||||||||||| |||| ||||  |||||||||||||    
T  40207576 tactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgcttcaaaatgaatgtcattttatatttttaatacaactttaa 40207488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 19906368 - 19906455
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagc-aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttt 388  Q
    |||||||||| |||||||||||||||  ||||||| ||||| || |||||||||||||||||||  ||||||||||||||||||||||    
T  19906368 tactccctccgtttcaaaatgagtgttgctttagccaaaaaaaaattgtttcaaaatgaatgtcgctttacatttccaatacaacttt 19906455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 36836019 - 36836102
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||||||||||||| ||||||  |||| ||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  36836019 cctccgtttcaaaatgagtgtcgctttagtcaaaataatttgtttcaaaatgaatgtcgctttacattttcaatacaactttaa 36836102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 36912061 - 36912124
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  36912061 atactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaatttgtttcaaaatgaatgtc 36912124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 28044318 - 28044242
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||||||||||| ||||| |||| |||| ||||||||||||| ||||||||| ||||||||||||||    
T  28044318 tttcaaaatgagtgtcactttagtaaaaaaaatt-gttttaaaatgaatgtcactttacattttcaatacaactttaa 28044242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 43813544 - 43813455
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||||| ||| |||||||||||| ||||||| || | ||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  43813544 atactacctccgttttaaaatgagtgtcgctttagccaacaaaatttgttttaaaatgaatgtcactttatatttccaatacaactttaa 43813455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 30514928 - 30515016
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||| | || ||  |||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  30514928 tactccctccgtttcaaaaggtgtatcgttttagccaaaaaaaattgtttcaaaatgaatgtcaatttacatttccaatacaactttaa 30515016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 22627547 - 22627457
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| || ||||||||||||| ||| |||| | |||| || ||||  |||||||||||||| ||||||||||||||||||||||||    
T  22627547 aatactccccccgtttcaaaatgagtatcattttaactaaaaaaaattgtcccaaaatgaatgtcactttacatttccaatacaactttaa 22627457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 35778453 - 35778523
Alignment:
Q  295 tatttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||| |||  ||||||||||||||||||    
T  35778453 tatttactactccctccattttaaaatgagtgtcactttagaaaaaataatacgtttcaaaatgaatgtca 35778523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 296 - 390
Target Start/End: Complemental strand, 42044184 - 42044090
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||||||| |||||||||||||||| |||||   |||| || || ||||||||| ||||||| ||||||||| ||||||||||||||    
T  42044184 atttattactccctccgtttcaaaatgagtgtcgctttaatcaaaaaaaattatttcaaaattaatgtcactttacattttcaatacaactttaa 42044090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 5722957 - 5723046
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||| |||||||||||| || ||  ||||| || ||| |||||||||||||||| ||||||||| ||||||||||||||    
T  5722957 atactccctccgttttaaaatgagtgtcgctctaataaaaaaaaattgcttcaaaatgaatgtcactttacattttcaatacaactttaa 5723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 296 - 380
Target Start/End: Original strand, 18292282 - 18292367
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    ||||| |||||||||| |||||||||||||||| |||||| |||||| || |||||||||||||||||||| |||  |||||||||    
T  18292282 atttactactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaat 18292367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 32346035 - 32345946
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagc-aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||||||||||||||||  |||||| ||||| ||||||||||||||||||||||  ||||||||| |||| |||||||||    
T  32346035 tactccatccgtttcaaaatgagtgtcgttttagccaaaaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 32345946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 36447257 - 36447181
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||| ||||||| |||| |||| |||||||||||||||||| ||||||||| |||||||| |||||    
T  36447257 tttcaaaatgagtgtcgctttagctaaaaaaatt-gtttcaaaatgaatgtcattttacattttcaatacaattttaa 36447181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 41906117 - 41906044
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| |||||||||||| |||| ||||||||| ||||| ||||||| |||||||||| |||||||||||||    
T  41906117 aaaatgaatgtcactttagctaaaaaaatttgttttaaaataaatgtcactttacatttctaatacaactttaa 41906044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 380
Target Start/End: Complemental strand, 12977889 - 12977805
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    ||||| |||||||||| ||| |||||||||||| ||||||| |||| || |||||||||||||||||||| |||  |||||||||    
T  12977889 atttactactccctcctttttaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaat 12977805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 26963434 - 26963522
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| || |||||||||||||||  ||||||| |||| || |||||||||||| ||||||  |||||||||||||| |||||||||    
T  26963434 tactccccccgtttcaaaatgagtgttgctttagccaaaaaaaattgtttcaaaataaatgtctatttacatttccaatgcaactttaa 26963522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 10685018 - 10684941
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||||    ||||||||| |||| |||||||||    
T  10685018 tttcaaaatgagtgtcgctttagccaaaataatttgtttcaaaatgaatgctgctttacattttcaatgcaactttaa 10684941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 32873359 - 32873274
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaa-caattt-gtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| | ||||||||||||||||| ||||| |||||| |||| ||||||||||||| |||| ||||||||||||| |||||    
T  32873359 cctccatttaacaatgagtgtcactttaggaaaaaacaattttgttttaaaatgaatgtcactttatatttccaatacaattttaa 32873274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 36447809 - 36447712
Alignment:
Q  294 ttatttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaa-tttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||||||| ||||||| ||||||||||  ||||| || ||||||| ||||||||| ||| |||| |||| ||||||||||||||    
T  36447809 ttatttaatattccttccattttaaaatgattgtcactttaataaaaaaaaatttgttttaaaatgaatatcactttatattttcaatacaactttaa 36447712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 322 - 390
Target Start/End: Complemental strand, 3681101 - 3681033
Alignment:
Q  322 gagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||| ||||||||||||||    
T  3681101 gagtgttactttggcaaaaaaaaattgttttaaaatgaatgtcactttacattttcaatacaactttaa 3681033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 388
Target Start/End: Complemental strand, 30833292 - 30833206
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttt 388  Q
    ||||||| ||| ||| |||||||||||| |||||||||||| || || ||| ||||||||| ||| ||||||||| ||||||||||||    
T  30833292 atactccttccgttttaaaatgagtgtcgctttagcaaaaa-aaattattttaaaatgaatatcattttacattttcaatacaacttt 30833206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 44057797 - 44057734
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||||||||||  ||||| ||||| || ||||||||||||||||||||    
T  44057797 tactccctccgtttcaaaatgagtgtcgttttagtaaaaaaaaattgtttcaaaatgaatgtca 44057734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 2296997 - 2297055
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||| |||||||||||||||| ||||||| |||| || ||||||||||||||||||||    
T  2296997 cctccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtca 2297055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 308 - 390
Target Start/End: Complemental strand, 42259740 - 42259658
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||||||||| |||||||||||||  |||| || |||||| ||||||||||| | ||||| ||| ||||||||||||||    
T  42259740 ctccgtttcaaaataagtgtcactttagttaaaaaaaattgttttaaaatgaatgttattttacgttttcaatacaactttaa 42259658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 33056480 - 33056385
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaa-tttgtttcaaaatgaatgtcagttt---acatttccaatacaactttaa 390  Q
    ||||| ||| ||| ||||||||| |||||| |||||| ||||| || ||||||||||||| ||||||| |||   |||||||||||||||||||||    
T  33056480 taatattccatccgtttcaaaataagtgtcgctttagtaaaaaaaaatttgtttcaaaataaatgtcattttacaacatttccaatacaactttaa 33056385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 18886636 - 18886712
Alignment:
Q  314 ttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| ||||||| ||||   |||| ||||||||| ||||||||| ||| ||||||||| ||||||||||||||    
T  18886636 ttcaaaattagtgtcattttaatcaaaaaaatttgttttaaaatgaatctcactttacattttcaatacaactttaa 18886712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 19105199 - 19105135
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagca-aaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||||||||||||||||  ||||||| |||| || |||||| |||||||||||||    
T  19105199 tactccctccatttcaaaatgagtgtcgttttagcaaaaaaaaaattgttttaaaatgaatgtca 19105135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 34274759 - 34274811
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  34274759 tttcaaaatgagtgtcgctttagccaaacaaatttgtttcaaaatgaatgtca 34274811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 365
Target Start/End: Complemental strand, 716054 - 715997
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||| ||| |||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  716054 cctccgttttaaaatgagtgtcgctttagccaaaa-aatttgtttcaaaatgaatgtca 715997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 29001725 - 29001652
Alignment:
Q  317 aaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||||||| |||||| |||| |||||||||| ||||||  ||||||||||||||| ||| ||||    
T  29001725 aaaatgagtgtcactttagtcaaaaataatt-gtttcaaaattaatgtcgttttacatttccaatataaccttaa 29001652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 44567241 - 44567175
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||| ||| |||||| ||||| ||||||  |||| ||||||||| |||||||||||||    
T  44567241 taatactccctccgttttaaaatgggtgtcgctttagtcaaaaaaatttgttttaaaatgaatgtca 44567175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 19920419 - 19920382
Alignment:
Q  353 aaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19920419 aaaatgaatgtcactttacatttccaatacaactttaa 19920382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 40804995 - 40805067
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||| |||  |||| ||||| ||| ||||| ||||||| ||||||||| ||||||||||||||    
T  40804995 aaaatgagtgtcactctagataaaa-aatttattttaaaataaatgtcactttacatttacaatacaactttaa 40805067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 1741946 - 1742008
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||||||||||  ||||||  ||| || ||||||||||||||||||||    
T  1741946 tactccctccgtttcaaaatgagtgtcgttttagcccaaa-aagttgtttcaaaatgaatgtca 1742008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 341
Target Start/End: Original strand, 48684671 - 48684710
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaa 341  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  48684671 tactccctccatttcaaaatgagtgtcgttttagcaaaaa 48684710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 31416952 - 31416862
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||  |||||||||||  |||  |||||  |||| || |||||| ||||||||| ||| ||||||||| ||||||||||||||    
T  31416952 aatacaccctctgtttcaaaatgaacgtcgatttagtcaaaaaaaattgttttaaaatgaatatcactttacattttcaatacaactttaa 31416862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 32345738 - 32345780
Alignment:
Q  294 ttatttaatactccctccatttcaaaatgagtgtcactttagc 336  Q
    |||| ||||||||||||| |||||||||||||||| |||||||    
T  32345738 ttatataatactccctccgtttcaaaatgagtgtcgctttagc 32345780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 47271686 - 47271767
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    ||||||||| ||||||||||||  ||||||||||| ||  | ||| |||||||||| || | || ||||||||||||||||||    
T  47271686 cctccattttaaaatgagtgtcgttttagcaaaaa-aaaatattttaaaatgaatgacactctagatttccaatacaacttta 47271767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 6747179 - 6747244
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| |||||||||||||||| ||||||  ||||| || |||||| |||| ||||||||    
T  6747179 atactccctccgtttcaaaatgagtgtcgctttagtaaaaaaaaaattgtttaaaaacgaatgtca 6747244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 19906658 - 19906621
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagc 336  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  19906658 taatactccctccgtttcaaaatgagtgtcgctttagc 19906621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 328
Target Start/End: Original strand, 31929777 - 31929806
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtc 328  Q
    ||||||||||||||||||||||||||||||    
T  31929777 taatactccctccatttcaaaatgagtgtc 31929806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 42753703 - 42753744
Alignment:
Q  343 aatttgtttcaaaatgaatgtcagtttacatttccaatacaa 384  Q
    ||||||||||||||||||||||| |||  |||||||||||||    
T  42753703 aatttgtttcaaaatgaatgtcactttcaatttccaatacaa 42753744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 45948829 - 45948764
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtca 365  Q
    ||||||| ||| ||| ||||||||||||  ||||||||||| ||  ||||||||||||||||||||    
T  45948829 atactccttccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtca 45948764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 46120390 - 46120456
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagc---aaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||||||||||||| ||||||||   ||||| || ||||||||||||||| ||||    
T  46120390 atactccctccgtttcaaaatgagtgt-actttagccaaaaaaaaaaattgtttcaaaatgaacgtca 46120456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 4268563 - 4268627
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    |||| ||||||| ||| ||||||||||||  |||||  |||| || |||||||||||||||||||    
T  4268563 aatattccctccgttttaaaatgagtgtcgttttagacaaaagaaattgtttcaaaatgaatgtc 4268627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 18270546 - 18270594
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| |||||||||||  |||| |||||| ||||||||||||||||    
T  18270546 aaaatgaatgtcactttagtcaaaaaaatttggttcaaaatgaatgtca 18270594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 22297952 - 22298013
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| ||| ||| ||||||||||||  ||||||||||  || ||||||||||||||||||||    
T  22297952 tactccatccgttttaaaatgagtgtcgttttagcaaaa--aaattgtttcaaaatgaatgtca 22298013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 27947699 - 27947635
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagca-aaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||||||||||  ||||||| |||| || |||| | |||||||||||||    
T  27947699 tactccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaaattgtcttaaaatgaatgtca 27947635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 7e-29; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 29840025 - 29840114
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||||||||||| |||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  29840025 atactccctccgtttcaaaatgactgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29840114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 31817375 - 31817289
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttt 388  Q
    |||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  31817375 tactccctccgtttcaaaatgagtgtcacattagccaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatgcaacttt 31817289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 50072238 - 50072320
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| |||||||||||||||||||||||| |||| || |||||||||||||||||||| ||||||||| ||||||||||||||    
T  50072238 ctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 50072320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 304 - 390
Target Start/End: Original strand, 51930553 - 51930639
Alignment:
Q  304 ctccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| |||||||||||||||||||||||  |||| ||||||||||||||||||||||  |||||||||||||||||| |||||    
T  51930553 ctccctccgtttcaaaatgagtgtcactttagttaaaaaaatttgtttcaaaatgaatgtcgctttacatttccaatacaattttaa 51930639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 39671283 - 39671194
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagc-aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| |||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||  ||||||||||||||||||||||||    
T  39671283 tacttcctccatttcaaaatgagtgtcactttatccaaaaaaaaattgtttcaaaatgaatgtcgttttacatttccaatacaactttaa 39671194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 44855193 - 44855281
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||||||||||||||||| ||||||||||| || ||||||| |||| ||||||| ||||||||||||||||||||||||    
T  44855193 tactccatccgtttcaaaatgagtgtcattttagcaaaaaaaaattgtttcgaaataaatgtcactttacatttccaatacaactttaa 44855281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 21045105 - 21045195
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||||| ||||||||||||||||| || ||| |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  21045105 taatacttcctccgtttcaaaatgagtgtca-ttgagccaaaaaaatttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 21045195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 52732555 - 52732638
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||||||||||||||||||||  |||| || |||||| ||||||||||||| ||||||||||||||||||||||||    
T  52732555 cctccgtttcaaaatgagtgtcactttagttaaaaaaaattgttttaaaatgaatgtcactttacatttccaatacaactttaa 52732638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 296 - 390
Target Start/End: Complemental strand, 56556461 - 56556366
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||| ||  ||| ||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  56556461 atttagtactccatctgttttaaaatgagtgtcactttagcaaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 56556366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 28116192 - 28116284
Alignment:
Q  298 ttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||  ||| |||||||||||||||| ||||||| |||| || || ||||||||| ||||||| ||||||||||||||||||||||||    
T  28116192 ttaatactcaatccgtttcaaaatgagtgtcgctttagccaaaaaaaattatttcaaaataaatgtcactttacatttccaatacaactttaa 28116284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 15501347 - 15501258
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||||||||||||| | ||||||||||||| ||  |||||| ||||||||||||| ||||||||||||||||||||||||    
T  15501347 tactccttccgtttcaaaatgagttttactttagcaaaaaaaaaattgtttgaaaatgaatgtcactttacatttccaatacaactttaa 15501258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 19282615 - 19282523
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaat--ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| ||| ||| |||||||||||| ||||| |||||| ||   |||||||||||||||||||| ||||||||||||||||||||||||    
T  19282615 aatactccttccgttttaaaatgagtgtcgctttaacaaaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 19282523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 32141164 - 32141075
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||||||||||||||||  |||| |||||| ||  ||||||||||||||||| || ||||||||||||||||||||||||    
T  32141164 tactccctccgtttcaaaatgagtgtcgttttaacaaaaaaaaaattgtttcaaaatgaatgccactttacatttccaatacaactttaa 32141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 6461960 - 6462048
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||| ||||||||| ||  ||||||||||| || |||||||||||||||||||  ||||||||||||||||||||||||    
T  6461960 tactccatccgtttaaaaatgagtatcgttttagcaaaaaaaaattgtttcaaaatgaatgtcgctttacatttccaatacaactttaa 6462048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 43421316 - 43421228
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| |||||||| ||||||||| ||||| ||||  ||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  43421316 tactccttccgtttcaaaacgagtgtcaccttagccaaaaatatttgtttcaaaatgaaggtcactttacatttcccatacaactttaa 43421228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 4505291 - 4505354
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| |||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  4505291 tactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtca 4505354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 390
Target Start/End: Original strand, 30022018 - 30022107
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| ||| ||| ||||||||||||| ||||| | ||| ||||||||||||||||||||| | || |||||||||||||||||||||    
T  30022018 aatactccatccgttttaaaatgagtgtcattttagaagaaa-aatttgtttcaaaatgaatgttacttgacatttccaatacaactttaa 30022107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 45520659 - 45520570
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| ||| ||||||||||||| |||| | |||| ||||| ||| ||||||||||||| ||||||||| ||||||||||||||    
T  45520659 atactccatccgttttaaaatgagtgtcattttaaccaaaataatttattttaaaatgaatgtcactttacattttcaatacaactttaa 45520570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 17318050 - 17317956
Alignment:
Q  298 ttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatt--tgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||||| || |||||||||||||||||||| ||    ||||||||| |||||||||  |||||||||||||||||||||||    
T  17318050 ttaatactccatccgtttcacaaagagtgtcactttagcaaaaaaaaaaaatgtttcaaactgaatgtcacattacatttccaatacaactttaa 17317956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 34124243 - 34124334
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||||||||| ||||||||||||  |||||  |||| ||||||||| ||||||||||||  ||||||||| |||| |||||||||    
T  34124243 taatacttcctccattttaaaatgagtgtcgttttagtcaaaaaaatttgttttaaaatgaatgtcgctttacattttcaatgcaactttaa 34124334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 32980081 - 32980027
Alignment:
Q  311 catttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  32980081 catttgaaaatgagtgtcgctttagcaaaaataatttgtttcaaaatgaatgtca 32980027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 6510084 - 6510157
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| |||||||||||  |||| ||||||||||||||| ||||||| |||| |||| ||||||||||||||    
T  6510084 aaaatgaatgtcactttagtcaaaataatttgtttcaaaataaatgtcactttatattttcaatacaactttaa 6510157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 17499919 - 17499830
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||||||||||||  ||||||||||| ||  |||||||||||||||||||  |||||||||||||| ||| |||||    
T  17499919 tactccctccgttttaaaatgagtgtcgatttagcaaaaaaaaaattgtttcaaaatgaatgtcgctttacatttccaatgcaattttaa 17499830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 22220564 - 22220499
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||| |||  |||||||||||||||||||||||| || |||||||||||| |||||||    
T  22220564 aatactccctccgttttgaaatgagtgtcactttagcaaaaaaaaattgtttcaaaataaatgtca 22220499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 24259566 - 24259650
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagc--aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||| |||||||||||| ||||| |  ||||| || |||||||||||||||||||| |||||||||||||| |||||||||    
T  24259566 ctccgttttaaaatgagtgtcgctttatccaaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatgcaactttaa 24259650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 37445626 - 37445699
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||||||||||| ||||| || |||||| ||||||||||||| |||||||||  |||||||||||||    
T  37445626 aaaatgaatgtcactttagtaaaaaaaaattgttttaaaatgaatgtcattttacatttttaatacaactttaa 37445699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 1868286 - 1868211
Alignment:
Q  314 ttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| |||||||||||||||||  |||| |||| |||||||||||||||||| ||||||||| |||| |||||||||    
T  1868286 ttcataatgagtgtcactttagtcaaaaaaatt-gtttcaaaatgaatgtcactttacattttcaatgcaactttaa 1868211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 4408379 - 4408291
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||||||| |||| |||||| ||||| || |||||||||||||||||||  ||||||||  |||| |||||||||    
T  4408379 tactccctccgttttaaaatgaatgtcgctttagtaaaaaaaaattgtttcaaaatgaatgtcgctttacattctcaatgcaactttaa 4408291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 35928442 - 35928530
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||  ||||| ||||||||||||||||   |||| || |||||||||||| ||| ||| ||||||||| ||||||||||||||    
T  35928442 tactccctctgtttcacaatgagtgtcactttaatcaaaaaaaattgtttcaaaataaatatcactttacattttcaatacaactttaa 35928530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 51434458 - 51434370
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||| ||| |||||||||||| ||||| |||||| || |||||| ||||||||||||  |||||||||| ||| |||||||||    
T  51434458 tactctctccgttttaaaatgagtgtcgctttaacaaaaaaaaattgttttaaaatgaatgtcgctttacatttctaatgcaactttaa 51434370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 1819517 - 1819579
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| ||||||||||||||||||||  ||||||||||| || ||||||||||||||||||||    
T  1819517 tactccatccatttcaaaatgagtgtcgttttagcaaaaa-aaattgtttcaaaatgaatgtca 1819579  T

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Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 388
Target Start/End: Original strand, 3093319 - 3093390
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttt 388  Q
    ||||||||||||||||||| ||||| | ||| ||| ||||||||||||| ||||||||| ||||| ||||||    
T  3093319 aaaatgagtgtcactttagtaaaaaaagtttattttaaaatgaatgtcactttacattttcaatataacttt 3093390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 390
Target Start/End: Complemental strand, 6232233 - 6232147
Alignment:
Q  304 ctccctccatttcaaaatgagtgtcactttagcaaaaacaa-tttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| ||||| || |||||||| ||||| ||||| || ||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  6232233 ctccctccgtttcataacgagtgtca-tttagtaaaaaaaaatttgtttcaaaataaatgtcaatttacattttcaatacaactttaa 6232147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 49080678 - 49080616
Alignment:
Q  303 actccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||||||||||||||   ||| ||||||| || ||||||||||||||||||||    
T  49080678 actccctccatttcaaaatgagtgttgtttttgcaaaaaaaaattgtttcaaaatgaatgtca 49080616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 30105875 - 30105932
Alignment:
Q  305 tccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatg 362  Q
    ||||||| ||||||||||||||||  ||||||||||| || |||||||||||||||||    
T  30105875 tccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatg 30105932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 36805633 - 36805556
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||| ||||||| |||| |  |||||| |||||| |||| | ||||||||| ||||||||||||||    
T  36805633 tttcaaaatgagtgtcgctttagctaaaaaatattgttttaaaatgtatgttattttacatttgcaatacaactttaa 36805556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 47321130 - 47321183
Alignment:
Q  337 aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  47321130 aaaaaaaatttgttttaaaatgaatgtcactttacattttcaatacaactttaa 47321183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 364
Target Start/End: Complemental strand, 52915748 - 52915683
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    ||||||||| |||  ||||||||||||||| ||||||| |||| || |||||||||||||||||||    
T  52915748 taatactccatccgattcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtc 52915683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 25231127 - 25231207
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    |||| ||| ||| ||| |||||||||||| |||||||||||| || |||||| ||||||||||||| |||  |||||||||    
T  25231127 aatagtccatcctttttaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtcactttcaatttccaat 25231207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 31941514 - 31941597
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||| ||||| |||||| |||||||||||| ||  |||||| ||||||||||||| ||||||||| ||||||||||||||    
T  31941514 cctccgttttaaaataagtgtc-ctttagcaaaaaaaaaattgttttaaaatgaatgtcactttacattttcaatacaactttaa 31941597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 32141323 - 32141236
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||||| | ||| |||||| || ||||||||||||||| |||| || | ||||  |||||||||||||    
T  32141323 tactccctccttttcaaaatgagtgtcgcattaacaaaaa-aaattgtttcaaaatgaacgtcacttcatattttgaatacaactttaa 32141236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 390
Target Start/End: Original strand, 34095978 - 34096054
Alignment:
Q  315 tcaaaatgagtgtcactttagc-aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| |||||||||| | ||||| || ||||||||||| |||||||| |||||||||| ||||||| |||||    
T  34095978 tcaaaatgaatgtcactttatccaaaaaaaaattgtttcaaaacgaatgtcaatttacatttctaatacaattttaa 34096054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 45903611 - 45903518
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagc----aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||| ||||||||||||| ||||      ||||| || || ||||||||||||||||| ||||||||| ||||||||||||||    
T  45903611 atactccctccgtttgaaaatgagtgtcattttaaggtaaaaaaaaaaattatttcaaaatgaatgtcactttacattttcaatacaactttaa 45903518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 50317775 - 50317723
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||||||||||||| | ||| |||||||||||||||||||    
T  50317775 tttcaaaatgaatgtcactttagcaaagaaaatgtgtttcaaaatgaatgtca 50317723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 6231605 - 6231696
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| | |||||||  ||||||||||| ||||||  |||| || |||||||||||||||||||| |||| ||||  | |||||||||||    
T  6231605 taatacttcatccatttggaaatgagtgtcgctttagttaaaaaaaattgtttcaaaatgaatgtcactttatatttatagtacaactttaa 6231696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 388
Target Start/End: Original strand, 28653030 - 28653116
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttt 388  Q
    |||||| |||| ||||| ||||||||| ||||||| ||||| |||| |||||||||| ||| ||| ||||||||| ||||||| ||||    
T  28653030 atactctctccgtttcacaatgagtgttactttagtaaaaaaaatt-gtttcaaaataaatatcactttacattttcaatacatcttt 28653116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 37624511 - 37624573
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| |||||||||||||| | |||||||||||| || |||||||||||| |||||||    
T  37624511 tactccctccgtttcaaaatgagtgacgctttagcaaaaa-aaattgtttcaaaataaatgtca 37624573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 52253799 - 52253862
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||||| ||||  |||||| |||| || ||||||||||||||||||||    
T  52253799 tactccctccgtttcaaaatgaatgtcgttttagccaaaaaaaattgtttcaaaatgaatgtca 52253862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 55548418 - 55548336
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| ||||||||||||  |||| |||||| |||| |||||||||| | ||||| ||||||||| |||| |||||||||    
T  55548418 cctccattttaaaatgagtgtcgttttaacaaaaaaaatt-gtttcaaaataagtgtcactttacattttcaatgcaactttaa 55548336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 19849037 - 19849123
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaat----ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| |||||||| |||| |||||||||||  ||    |||||| ||||||||| ||| |||||| |||||||||||||||||    
T  19849037 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 19849123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 22212304 - 22212380
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| | |||| ||||||| |||| |||| |||| |||||||||||||  |||||||||||||| ||||||||    
T  22212304 tttcaaaataaatgtcgctttagccaaaaaaatt-gttttaaaatgaatgtcaccttacatttccaatataactttaa 22212380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 45889531 - 45889602
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| |||| |||||| ||||| |||| ||||||||||||||||| | |||||||| ||||||||||||||    
T  45889531 aaaatgattgtcgctttagtaaaaaaaatt-gtttcaaaatgaatgtc-gcttacattttcaatacaactttaa 45889602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 361
Target Start/End: Original strand, 47817687 - 47817751
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagc--aaaaacaatttgtttcaaaatgaat 361  Q
    ||||||||||||| ||||||||||||||||  ||||||  ||||| || ||||||||||||||||    
T  47817687 taatactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaaaattgtttcaaaatgaat 47817751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 19878602 - 19878665
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||  ||||||||||||||||  ||||||||||| || |||||| |||||||||||||    
T  19878602 atactccctctgtttcaaaatgagtgtcgttttagcaaaaa-aaattgtttgaaaatgaatgtca 19878665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 26934648 - 26934584
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| || ||||| ||||||||| |   ||||||||||||||||||||||||||| |||||||    
T  26934648 atactctcttcattttaaaatgagtatatttttagcaaaaacaatttgtttcaaaataaatgtca 26934584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 49089415 - 49089481
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagc---aaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||||||||||  ||||||   ||||| || ||||||||||||||||||||    
T  49089415 tactccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaaaaattgtttcaaaatgaatgtca 49089481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 31987276 - 31987343
Alignment:
Q  323 agtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| |||||| |||  || || ||| ||||||||||||| |||||||||| |||||||||||||    
T  31987276 agtgtcattttagccaaataaaattattttaaaatgaatgtcactttacatttctaatacaactttaa 31987343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 51733701 - 51733634
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagca-aaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||| | | ||||||||||||||||  ||||||| |||| || ||||||||||||||||||||    
T  51733701 taatactccattcgtttcaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtca 51733634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 52848242 - 52848179
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    ||||||||||||  ||||||||||| || |||||| ||||||||||||| |||  |||||||||    
T  52848242 aaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaatgtcactttcaatttccaat 52848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 54711070 - 54711007
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| ||| ||||||||||| ||||  ||||||||||  || ||||||||||||||||||||    
T  54711070 tactccatccgtttcaaaatgactgtcgttttagcaaaatgaaattgtttcaaaatgaatgtca 54711007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 10573359 - 10573294
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagca--aaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||| |||| ||||||||||||  |||||||  |||| || ||||||||||||||||||||    
T  10573359 tactccctctattttaaaatgagtgtcgttttagcaccaaaaaaaattgtttcaaaatgaatgtca 10573294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 24940833 - 24940911
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    |||||| ||| |||||||||||||||   |||| | |||| | ||||||||||||||||||||| |||  |||||||||    
T  24940833 tactccatccgtttcaaaatgagtgttggtttatccaaaaaagtttgtttcaaaatgaatgtcattttcgatttccaat 24940911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 44835288 - 44835373
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||||||||||| | |||| |||| ||||| || |||||| ||   |||| ||| |||||||||| |||||||||||||    
T  44835288 tactccctccgtttcaaaatgaatatcaccttagaaaaaaaaaattgttttaa---gaatatcactttacatttcgaatacaactttaa 44835373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 52957996 - 52957930
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| ||||  ||||||||||||||||  |||||| ||||  | ||||||||||||||||||||    
T  52957996 taatacttcctctgtttcaaaatgagtgtcgttttagccaaaaagaattgtttcaaaatgaatgtca 52957930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 365
Target Start/End: Complemental strand, 7906193 - 7906136
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||| |||||||||||| |||||||||||  || |  |||||||||||||||||    
T  7906193 ctccattttaaaatgagtgtcgctttagcaaaataaaatcatttcaaaatgaatgtca 7906136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 19930666 - 19930731
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| ||| | ||| ||||||| ||||  ||||||||||| || ||||||||||||||||||||    
T  19930666 aatactaccttcgttttaaaatgaatgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtca 19930731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 54233812 - 54233885
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||| ||||| | |||| || || |||||||||||||| |  ||||||||| ||||||||||||||    
T  54233812 aaaattagtgtcgctttaaccaaaaaaaattatttcaaaatgaatgccgctttacattttcaatacaactttaa 54233885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 31941796 - 31941760
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagc 336  Q
    |||||||||||| |||||||||||||||| |||||||    
T  31941796 aatactccctccgtttcaaaatgagtgtcgctttagc 31941760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 34359982 - 34360033
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatga 359  Q
    ||||| |||||||||||||||||||||||| ||||  |||| |||||||||||    
T  34359982 cctccgtttcaaaatgagtgtcactttagctaaaa-tatttatttcaaaatga 34360033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 37654360 - 37654427
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||| |||||||||| ||||||||||||||||  |||||  |||| || |||||| |||||||||||||    
T  37654360 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 37654427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 390
Target Start/End: Original strand, 38692401 - 38692453
Alignment:
Q  338 aaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||||||||| ||||||||||||| ||||||||| ||||  ||||||||    
T  38692401 aaaaaaatttgttttaaaatgaatgtcactttacattttcaattaaactttaa 38692453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 54042387 - 54042323
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||| ||||| ||| |||||||||||   ||||||||||| || |||||| |||||||||||||    
T  54042387 atacttcctccgtttaaaaatgagtgttgttttagcaaaaaaaaattgttttaaaatgaatgtca 54042323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 308 - 365
Target Start/End: Complemental strand, 56555901 - 56555842
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagca--aaaacaatttgtttcaaaatgaatgtca 365  Q
    |||| |||||||||||||||| ||||||||  |||| || |||||| |||||||||||||    
T  56555901 ctccgtttcaaaatgagtgtcgctttagcaaaaaaaaaaattgttttaaaatgaatgtca 56555842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 35052422 - 35052513
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| |||||||||||||||| |||||||||||| || |||||| ||||||||||||  ||||||||||||||||||||||||    
T  35052422 taatactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtcgttttacatttccaatacaactttaa 35052513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 18666720 - 18666632
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    ||||||||||| ||||||||||||| ||||||||||||||| || || ||||||||||||||||| |||||||||||||| ||||||||    
T  18666720 atactccctccgtttcaaaatgagtatcactttagcaaaaaaaaattctttcaaaatgaatgtcactttacatttccaatgcaacttta 18666632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 22601090 - 22601178
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||| ||||||||||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||||||||    
T  22601090 tactccctccgtttcaagatgagtgtcactttagccaaaaagttttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 22601178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 1774258 - 1774170
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||| |||||||||||||||||||| |||| || |||||| ||||||||||||| ||||||||| ||||||||||||||    
T  1774258 tactccttccgttttaaaatgagtgtcactttagccaaaaaaaattgttttaaaatgaatgtcaatttacattttcaatacaactttaa 1774170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 7612452 - 7612540
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| |||||||||||||||||| |||||| || |||||| ||||||||||||| ||||||||| ||||||||| ||||    
T  7612452 tactccctcccttttaaaatgagtgtcactttaacaaaaaaaaattgttttaaaatgaatgtcactttacattttcaatacaacattaa 7612540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 8471235 - 8471323
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||||||||||| | ||||||| |||| || |||||||||||||||||||  |||||||||||||| |||||||||    
T  8471235 tactccctccgtttcaaaatgagtgccgctttagccaaaaaaaattgtttcaaaatgaatgtcgctttacatttccaatgcaactttaa 8471323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 27416455 - 27416542
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    ||||||| ||| ||||||||||||||| |||||| |||||| ||||  ||||||||||||||||| |||||||||||||||||||||||    
T  27416455 atactccatccgtttcaaaatgagtgttactttaacaaaaaaaatta-tttcaaaatgaatgtcactttacatttccaatacaacttta 27416542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 38329228 - 38329140
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| |||||||||||||||||||||||  |||| ||||||||| ||||||||||||| |||| |||| ||||||||||||||    
T  38329228 tactccttccgtttcaaaatgagtgtcactttagtcaaaaaaatttgttttaaaatgaatgtcactttatattttcaatacaactttaa 38329140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 14541946 - 14541856
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| ||| |||||||||||| |||||||||||| ||  |||||||||||||||||||| |||||||||| |||||||||||||    
T  14541946 atactccttccgttttaaaatgagtgtcgctttagcaaaaaaaaaattgtttcaaaatgaatgtcactttacatttctaatacaactttaa 14541856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 7129266 - 7129343
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||||||| |||||| || || ||||||||||||||||| ||||||||| |||| |||||||||    
T  7129266 tttcaaaatgagtgtcactttaacaaaaaaaaattatttcaaaatgaatgtcactttacattttcaatgcaactttaa 7129343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 29931418 - 29931342
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||||||||||||||||| || |||||| ||||| ||| ||| ||||||||||||||||||||||||    
T  29931418 tttcaaaatgagtgtcactttagcaaaaa-aaattgttttaaaataaatatcactttacatttccaatacaactttaa 29931342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 41790321 - 41790228
Alignment:
Q  295 tatttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||| ||||||  |||||||||||||||||||||||||||||  |||   |||||||||||||||| |||||||||| |||||||||||||    
T  41790321 tatttgatattccctctctttcaaaatgagtgtcactttagcaaaaaacattg--ttcaaaatgaatgtcactttacatttctaatacaactttaa 41790228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 2803436 - 2803348
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| ||||| ||||||||||| |||||| |||| ||||||||||||||| ||||||| ||||||||| |||||||| |||||    
T  2803436 atactccatccgtttcataatgagtgtcattttagctaaaa-aatttgtttcaaaataaatgtcactttacattttcaatacaattttaa 2803348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 39463207 - 39463276
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||||| ||||||||||||||||  |||||| |||| || ||||||||||||||||||||    
T  39463207 atttaatactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtca 39463276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 9022349 - 9022437
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||||||||| ||| |||||| ||||  | |||||| ||||||||||||| ||||| ||||||||||||||||||    
T  9022349 tactccctccgttttaaaatgagtatcattttagccaaaaagaattgttttaaaatgaatgtcactttacgtttccaatacaactttaa 9022437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 26438929 - 26439016
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| |||||| ||||||||||||||||  |||| ||||| ||| |||||||||| || ||||||||||| ||||||||||||    
T  26438929 atactccctccgtttcaacatgagtgtcactttaggcaaaa-aatttattttaaaatgaatgccactttacatttcc-atacaactttaa 26439016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 36915337 - 36915409
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||| ||||||  |||| |||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  36915337 aaaatgagtgtcgctttagtcaaaaaaatt-gtttcaaaatgaatgtcactttacattttcaatacaactttaa 36915409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 45187472 - 45187395
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| ||| |||||||||| ||||  |||||||||||||| ||||||| |||| |||| ||||||||||||||    
T  45187472 tttcaaaataagtctcactttagccaaaaatatttgtttcaaaataaatgtcactttatattttcaatacaactttaa 45187395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 11165480 - 11165544
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || || ||| ||||||||||||    
T  11165480 aatactccctccgttttaaaatgagtgtcactttagcaaaaaaaaattattttaaaatgaatgtc 11165544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 27110019 - 27109931
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||  ||| ||||||| |||   |||||| ||||  |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27110019 tactccctctgttttaaaatgaatgttgttttagccaaaaatatttgtttcaaaatgaatgtcactttccatttccaatacaactttaa 27109931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 30788889 - 30788977
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||||| ||||| | ||||||||||||||||| ||  ||||| ||||| ||||||| ||||||| | ||||||||||||||    
T  30788889 tactctctccattttaaaataaatgtcactttagcaaaaaaaaaatgttttaaaataaatgtcactttacatattcaatacaactttaa 30788977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 33870709 - 33870796
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||||||| |||||||| ||||| | |||| ||||| |||||||||| |||||| |||| |||| ||||||||||||||    
T  33870709 tactccctccgtttcaaa-tgagtgtcgctttaaccaaaataatttatttcaaaatggatgtcactttatattttcaatacaactttaa 33870796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 15160645 - 15160582
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||| |||| |||||||||||||||| ||||||| |||| || ||||||||||||||||||||    
T  15160645 tactcactccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtca 15160582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 390
Target Start/End: Original strand, 42946082 - 42946164
Alignment:
Q  310 ccatttcaaaatgagtgtcactttagcaaaaacaat--ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| |||||||||||||||||| |||||| ||   |||||| ||||||||||||| |||||||||  |||||||||||||    
T  42946082 ccattttaaaatgagtgtcactttaacaaaaaaaaaagttgttttaaaatgaatgtcattttacatttttaatacaactttaa 42946164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 16208914 - 16208992
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaa-acaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||| ||||||||| ||| |   ||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  16208914 tttcaaaatgagtgacactttagccaaatattttttttttcaaaatgaatgtcactttacattttcaatacaactttaa 16208992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 34461737 - 34461695
Alignment:
Q  348 gtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  34461737 gtttcaaaatgaatgtcactttacatttccaatacaactttaa 34461695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 302 - 384
Target Start/End: Complemental strand, 37559732 - 37559650
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaa 384  Q
    |||||| ||| |||||||||||||||| |||||||||||| || |||||| ||||| ||||||| |||   ||||||||||||    
T  37559732 tactccatccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatcaatgtcactttcagtttccaatacaa 37559650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 156197 - 156283
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||| | ||| | ||||||| |||||||||| |||| |  |||||||||||||||||||| |||||||| |||||| ||||||||    
T  156197 tactcccttcgttttataatgagtatcactttagccaaaaaa--ttgtttcaaaatgaatgtcactttacattcccaatataactttaa 156283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 305 - 385
Target Start/End: Original strand, 39970279 - 39970362
Alignment:
Q  305 tccctccatttcaaaatgagtgtcactttagcaaaaacaat---ttgtttcaaaatgaatgtcagtttacatttccaatacaac 385  Q
    ||||||| ||||| ||| | ||||||||||||||||| ||    |||||||||||||||||| | |||||||||||||||||||    
T  39970279 tccctccgtttcataataaatgtcactttagcaaaaaaaaaaaattgtttcaaaatgaatgttactttacatttccaatacaac 39970362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 39698865 - 39698802
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||||||||||||||  |||||| |||| || ||||||||||||||||||||    
T  39698865 atactccctccgtttcaaaatgagtgtcgttttagccaaaa-aaattgtttcaaaatgaatgtca 39698802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 39766047 - 39765995
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||||| ||||||| |||| || ||||||||||||||||||||    
T  39766047 tttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtca 39765995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 396412 - 396350
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||| |||||||||||| |||||||||||| |  |||||| |||||||||||||    
T  396412 tactccctccattttaaaatgagtgtcgctttagcaaaaa-acattgttttaaaatgaatgtca 396350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 7839427 - 7839490
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    ||||||||||||  ||||||||||| || |||||||||||||||||||| |||  |||||||||    
T  7839427 aaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaat 7839490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 13108939 - 13109030
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||||| ||||| ||||||  |||||  |||| || |  ||||||||||||||||| ||||||||| |||| |||||||||    
T  13108939 taatactcccttcattttaaaataagtgtcgttttagtcaaaaaaaatgatttcaaaatgaatgtcattttacattttcaatgcaactttaa 13109030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 11335808 - 11335869
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacattt 375  Q
    ||||||||||||||||||| || | |||| | ||||||||||||||||||||| |||||||||    
T  11335808 tttcaaaatgagtgtcactctaaccaaaata-tttgtttcaaaatgaatgtcactttacattt 11335869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 5588672 - 5588584
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| |||  |||||||||| ||||   ||||| |||| |||| |||| ||| ||||||||| ||||||||||||||||||||||||    
T  5588672 atactccatccgcttcaaaatgaatgtcgtattagccaaaaaaatt-gttttaaactgaatgtcaatttacatttccaatacaactttaa 5588584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 11257495 - 11257584
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| ||| ||| ||| || ||||||  |||  || |||||| ||||||||||||| |||||||||  |||||||||||||    
T  11257495 atactccctccatctcataataagtatccctttagttaaagaaaattgttttaaaatgaatgtcactttacatttttaatacaactttaa 11257584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 32061607 - 32061534
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||||||   |||| || |||||| ||||||||||||| ||||||||| | |||||| |||||    
T  32061607 aaaatgagtgtcactttaaataaaaaaaattgttttaaaatgaatgtcactttacattttctatacaaatttaa 32061534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 389
Target Start/End: Original strand, 3203287 - 3203368
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    |||||||||| |||||||||||||      ||||| |||| || |||||||||||| ||||||| ||||||||| |||| ||||||||    
T  3203287 tactccctccgtttcaaaatgagt------ttagccaaaaaaaattgtttcaaaataaatgtcactttacattttcaatgcaacttta 3203368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 40362400 - 40362452
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||||||| |||||| ||||| || |||||| |||||||||||||    
T  40362400 tttcaaaatgagtgtcgctttagaaaaaaaaaattgttttaaaatgaatgtca 40362452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 390
Target Start/End: Complemental strand, 34168355 - 34168316
Alignment:
Q  351 tcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  34168355 tcaaaatgaatgtcactttacattttcaatacaactttaa 34168316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 8382625 - 8382588
Alignment:
Q  353 aaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  8382625 aaaatgaatgtcactttacattttcaatacaactttaa 8382588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 9812138 - 9812190
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||| ||  ||||||||||| || |||||| |||||||||||||    
T  9812138 tttcaaaatgagtatcgttttagcaaaaaaaaattgttttaaaatgaatgtca 9812190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 365
Target Start/End: Original strand, 17920913 - 17920973
Alignment:
Q  305 tccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| ||| ||||||| ||||  ||||||||||| || |||||| |||||||||||||    
T  17920913 tccctccgttttaaaatgaatgtcgttttagcaaaaaaaaattgttttaaaatgaatgtca 17920973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 29312380 - 29312329
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||||||  ||||||||||| || |||||| |||||||||||||    
T  29312380 tttcaaaatgagtgtcgttttagcaaaaaaaaattgttt-aaaatgaatgtca 29312329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 302 - 384
Target Start/End: Complemental strand, 15647259 - 15647177
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaa 384  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| ||||||||    
T  15647259 tactccctccatttcataatgagtgtcactttagcaaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaa 15647177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 44582975 - 44582890
Alignment:
Q  305 tccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| |||||||||||||||||||||| | |||||||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  44582975 tccctccgtttcaaaatgagtgtcactttaactaaaacaatttatttcaaaataaatgtcactttacatttccaatacaactttaa 44582890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 84692 - 84604
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||| ||||||||||||||||||||| || |||||| ||||||||||||| ||||||||||||||||||||||||    
T  84692 tactccctccgttttaaattgagtgtcactttagcaaaaaaaaattgttttaaaatgaatgtcactttacatttccaatacaactttaa 84604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 12851699 - 12851783
Alignment:
Q  306 ccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||||||||||| ||||| |||||| || |||||||||||||||||||| ||||||||||||||| ||||||||    
T  12851699 ccctccatttcaaaatgagtgtctctttaacaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatagaactttaa 12851783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 38132361 - 38132278
Alignment:
Q  306 ccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||||||||||| ||||||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  38132361 ccctccatttcaaaatgagtgtcgctttagccaaaaaaatt-gtttcaaaatgaatgtcactttacatttccaatacaactttaa 38132278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 9552528 - 9552440
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| |||| ||||||||||||||||||  ||||| || |||||| ||||||||||||| ||||||||||||||||||||||||    
T  9552528 tactccctctattttaaaatgagtgtcactttaataaaaaaaaattgttttaaaatgaatgtcattttacatttccaatacaactttaa 9552440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 43929635 - 43929727
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagc-aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||   ||||||||||||||||||    
T  43929635 taatactccctccgtttcaaaatgagtgtcactttagcaaaaaaaaaattgtttcaaaatgaatgtcaatttcagtttccaatacaactttaa 43929727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 48260043 - 48259964
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaat--ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||||||||||||||||| ||   |||||||||||||||||||| ||||||||||||||||||||||||    
T  48260043 tttcaaaatgagtgtcactttagcaaaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 48259964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 50350056 - 50349966
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatga--atgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||||||||||||| |||||||||| |||| || ||||||||||||||  |||||| ||||||||||||||||||||||||    
T  50350056 tactccctccgtttcaaaatgagtatcactttagccaaaaaaaattgtttcaaaatgaatatgtcactttacatttccaatacaactttaa 50349966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 2458961 - 2459050
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||||||||||||||||  |||||| |||| ||||||||||||||||||||||  ||||||||| |||| |||||||||    
T  2458961 atactccctccgtttcaaaatgagtgtcgttttagccaaaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 2459050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 24041188 - 24041111
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||| ||| |||||||||||| || |||||||||||||||||||| ||||||||| ||||||||||||||    
T  24041188 tttcaaaatgagcgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 24041111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 1430710 - 1430623
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| |||||||||| |||||||||||||||||| || | |||||||||||||||||| |||||||||| |||||||||||||    
T  1430710 tactccatccgtttcaaaatgcgtgtcactttagcaaaaaaaaat-gtttcaaaatgaatgtcactttacatttctaatacaactttaa 1430623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 12002200 - 12002288
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||||||||||||  |||||| |||| || |||||| ||||||||||||| ||||||||||||||||||||||||    
T  12002200 tactccctccgttttaaaatgagtgtcgttttagctaaaaaaaattgttttaaaatgaatgtcattttacatttccaatacaactttaa 12002288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 15698956 - 15698861
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaat--ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| |||||| ||| ||||||||||||||||||||||||||||| ||   |||||| ||||||||||||| |||| |||||||||||||||||||    
T  15698956 tttattactccatccgtttcaaaatgagtgtcactttagcaaaaaaaaaaattgttttaaaatgaatgtcactttatatttccaatacaactttaa 15698861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 17806573 - 17806485
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||| |||||||||||||||||||||||| |||| || |||||| ||||||| ||||  ||||||||||||||||||||||||    
T  17806573 tactcactccgtttcaaaatgagtgtcactttagccaaaaaaaattgttttaaaatgagtgtcgctttacatttccaatacaactttaa 17806485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 30685480 - 30685543
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30685480 tactccctctgtttcaaaatgagtgtcactttagcaaaaataatttgtttcaaaatgaatgtca 30685543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 45377348 - 45377261
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    |||||||| | ||||| ||||||||||||||||||||||| |  |  ||||||||||||||||| |||||||||||||||||||||||    
T  45377348 tactcccttcgtttcataatgagtgtcactttagcaaaaaaatataatttcaaaatgaatgtcactttacatttccaatacaacttta 45377261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 308 - 390
Target Start/End: Complemental strand, 5317769 - 5317687
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| |||||||||||||||||||||| | || | ||||||||||||||||||||||| |||||| || ||||||||||||||    
T  5317769 ctccgtttcaaaatgagtgtcactttatccaacaaaatttgtttcaaaatgaatgtcactttacaatttcaatacaactttaa 5317687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 255113 - 255024
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| ||| ||||||||| || |||||||||||| || |||||||||||||||||||  |||||||||||||| |||||||||    
T  255113 atactccatccgttttaaaatgagtatcgctttagcaaaaaaaaattgtttcaaaatgaatgtcgctttacatttccaatgcaactttaa 255024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 43755018 - 43755095
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||||||||||||| |||| || || |||||||||||| |||| ||||||||| ||||||||||||||    
T  43755018 tttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaacgtcactttacattttcaatacaactttaa 43755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 49894755 - 49894848
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||| ||| ||||||||| || ||||||| |||| || || ||||||||||||||| | ||||||||||||||||||||||||    
T  49894755 tttaatactccttccgttttaaaatgagtatcgctttagccaaaaaaaattatttcaaaatgaatgttattttacatttccaatacaactttaa 49894848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 17920022 - 17919930
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatt-tgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| ||| |||||||||||| |||||||||||| ||   | ||||||||||||| ||| ||||||||||||||||||||||||    
T  17920022 taatactccctccgttttaaaatgagtgtcgctttagcaaaaaaaaaaatatttcaaaatgaatatcactttacatttccaatacaactttaa 17919930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 44024499 - 44024587
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| |||||||||||| |||||||||||| || ||||||||||||||||| |  ||||||||| |||| |||||||||    
T  44024499 tactccctccgttttaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgccgctttacattttcaatgcaactttaa 44024587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 26252086 - 26252157
Alignment:
Q  317 aaaatgagtgtcactttagca-aaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactt 387  Q
    ||||||||||||||||||| | |||| || |||||||||||||||||||| |||||||||||||||||||||    
T  26252086 aaaatgagtgtcactttagaagaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactt 26252157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 304 - 390
Target Start/End: Complemental strand, 28751605 - 28751518
Alignment:
Q  304 ctccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatg-aatgtcagtttacatttccaatacaactttaa 390  Q
    |||| ||| |||||||||||||||||||||||| |||| || || |||||||||| ||||||| ||||||||| ||||||||||||||    
T  28751605 ctccatccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaaatgtcactttacattttcaatacaactttaa 28751518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 11065970 - 11066023
Alignment:
Q  312 atttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  11065970 atttcaaaataagtgtcactttagcaaaaataatttgtttcaaaatgaatgtca 11066023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 22664895 - 22664981
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||  ||||||||||||  |||||||||| |||| |  |||||||||||||||||||| ||||||||||||||||||| ||||    
T  22664895 tactccctcagtttcaaaatgagcatcactttagctaaaaaa--ttgtttcaaaatgaatgtcactttacatttccaatacaacgttaa 22664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 34032279 - 34032214
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||  ||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  34032279 aatactccctccgcttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtca 34032214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 11650009 - 11650100
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatt--tgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| ||| |||||| |||| ||||||||||||| || |  ||||||||||||||||||| ||||||||| ||||||||||||||    
T  11650009 atactccatccgttttaaaatgtgtgtaactttagcaaaaaaaaatattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 11650100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 50158504 - 50158417
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| ||| ||||||||||||||| |||  |||| ||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  50158504 tactccctccgttttaaaatgagtgtcactgtagtcaaaaaaatta-tttcaaaatgaatgtcactttacattttcaatacaactttaa 50158417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 672464 - 672397
Alignment:
Q  303 actccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagttta 370  Q
    ||||||||| ||| |||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||    
T  672464 actccctccgttttaaaatgagtgtcactttagccaaaaaaatttgttttaaaatgaatgtcacttta 672397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 5854426 - 5854336
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||  ||||||||  |||||| |||||||||||  ||||||||||| ||| ||||||  |||||||||||||| |||||||||    
T  5854426 aatactccctcggtttcaaaaaaagtgtcgctttagcaaaagaaatttgtttcagaataaatgtcgctttacatttccaatgcaactttaa 5854336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 387
Target Start/End: Original strand, 1428837 - 1428905
Alignment:
Q  318 aaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactt 387  Q
    |||||||||||||||||||||||| || | |||| ||||||||||||| |||||||||| ||||||||||    
T  1428837 aaatgagtgtcactttagcaaaaaaaaat-gttttaaaatgaatgtcactttacatttctaatacaactt 1428905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 29567844 - 29567913
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||| |||||||||| ||||||||| ||||||  ||||||||||| || ||||||||||||||||||||    
T  29567844 atttattactccctccgtttcaaaattagtgtcgttttagcaaaaaaaagttgtttcaaaatgaatgtca 29567913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 43105768 - 43105692
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    ||||||| ||||||||| |||| | |||||||||| ||| |||||||||||||  |||||||| |||||||||||||    
T  43105768 tttcaaagtgagtgtcattttaaccaaaacaatttattttaaaatgaatgtcaccttacattttcaatacaacttta 43105692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 48025452 - 48025388
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||| ||||||||||||  ||||||||||| || ||||||||||||||||||||    
T  48025452 atactccctccgttttaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtca 48025388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 50249263 - 50249327
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||  ||| |||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  50249263 atactccctctgttttaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtca 50249327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 11134661 - 11134571
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagc--aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||  ||||||||||||||||  ||||||  ||||| ||  ||||||||||||||||||| ||||||||| |||| |||||||||    
T  11134661 tactccctctgtttcaaaatgagtgtcgttttagctaaaaaaaaaaatgtttcaaaatgaatgtcactttacattttcaatgcaactttaa 11134571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 28411328 - 28411265
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||| ||||||| |||||||||||||||||||||| | ||| ||| |||||||||||||    
T  28411328 tactccctcaatttcaagatgagtgtcactttagcaaaaatattttcttttaaaatgaatgtca 28411265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 302 - 384
Target Start/End: Original strand, 24483343 - 24483424
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaa 384  Q
    |||||| ||||||| ||||||||||||  ||||| ||||| |||| ||||||||||||||||||||||   ||||||||||||    
T  24483343 tactccatccattttaaaatgagtgtcgttttagaaaaaaaaatt-gtttcaaaatgaatgtcagtttcagtttccaatacaa 24483424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 12484819 - 12484766
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaat 361  Q
    |||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  12484819 ctccgttttaaaatgagtgtcactttagtaaaaacaaattgtttcaaaatgaat 12484766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 32807137 - 32807072
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||| ||||||||||||||||  ||||||  ||| || ||||||||||||||||||||    
T  32807137 aatactccctccgtttcaaaatgagtgtcgttttagcctaaaaaaattgtttcaaaatgaatgtca 32807072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 40061082 - 40061007
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| |||||| ||| |||||||| ||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  40061082 tttcaaaattagtgtcgctt-agcaaaaaaaatta-tttcaaaatgaatgtcactttacattttcaatacaactttaa 40061007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 29523469 - 29523405
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||| ||||| ||||||||||| |||| ||| || ||||| |||||||||||||||||||||||    
T  29523469 atacttcctccgtttcaaaatgattgtcgcttcagtaaaaataatttgtttcaaaatgaatgtca 29523405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 26352262 - 26352215
Alignment:
Q  318 aaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  26352262 aaatgagtgtcgctttagccaaaataatttgtttcaaaatgaatgtca 26352215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 31491967 - 31491904
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||| ||||||  |||||| |||| || ||||||||||||||||||||    
T  31491967 tactccctccgtttcaaaatcagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtca 31491904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 26755185 - 26755255
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaataca 383  Q
    ||||||||||||||||  |||||| |||| || |||||||||||||||||||| |||   |||||||||||    
T  26755185 tttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaataca 26755255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 308 - 365
Target Start/End: Complemental strand, 4471609 - 4471552
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||| ||||  |||||||    
T  4471609 ctccattttaaaatgagtgtcactttagaaaaaataatttgttttaaaaaaaatgtca 4471552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 6332135 - 6332208
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||  |||||||||||| || |||||| ||||||||||||| |||||||||  || ||||||||||    
T  6332135 aaaataagtgttgctttagcaaaaaaaaattgttttaaaatgaatgtcactttacatttttaacacaactttaa 6332208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 27720911 - 27720975
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||| ||| |||||||||||||||| ||||||| |||| ||||| ||| |||||||||||||    
T  27720911 aatactccatccgtttcaaaatgagtgtcgctttagccaaaa-aatttatttaaaaatgaatgtca 27720975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 308 - 365
Target Start/End: Complemental strand, 38646163 - 38646106
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||| ||| |||||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  38646163 ctccgttttaaaatgagtgtcgctttagcaaaaataatttatttcaaaatgtatgtca 38646106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 5463529 - 5463592
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||||||||| ||||  |||||| |||| || ||||||||||||||||||||    
T  5463529 atactccctccgtttcaaaatgaatgtcgttttagc-aaaagaaattgtttcaaaatgaatgtca 5463592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 28200425 - 28200361
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtc 364  Q
    |||||||||||| ||| ||||||||||||  |||||  |||| || |||||||||||||||||||    
T  28200425 aatactccctccgttttaaaatgagtgtcgttttagtcaaaaaaaattgtttcaaaatgaatgtc 28200361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 44583733 - 44583814
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaa----tttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||||||| ||||||||||||||| ||    ||||||| |||||||||||||  ||||||||  |||||||||||||    
T  44583733 tttcacaatgagtatcactttagcaaaaaaaaaaaatttgttttaaaatgaatgtcaccttacatttttaatacaactttaa 44583814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 336
Target Start/End: Original strand, 49468619 - 49468655
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagc 336  Q
    ||||||||||||||||||||||||||||| |||||||    
T  49468619 aatactccctccatttcaaaatgagtgtcgctttagc 49468655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 50158224 - 50158263
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttag 335  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  50158224 atttattactccctccgtttcaaaatgagtgtcactttag 50158263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 361
Target Start/End: Complemental strand, 13408465 - 13408403
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaat 361  Q
    ||||||||||| | ||| ||||||||||||  |||| ||||||||| |||||| |||||||||    
T  13408465 taatactcccttcgttttaaaatgagtgtcgttttaccaaaaacaaattgttttaaaatgaat 13408403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 44258706 - 44258641
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagca--aaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||| | |||||||||||||||| ||||||||  |||| || |||||| |||||||||||||    
T  44258706 tactcccttcgtttcaaaatgagtgtcgctttagcaaaaaaaaaaattgttttaaaatgaatgtca 44258641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 390
Target Start/End: Complemental strand, 42650424 - 42650360
Alignment:
Q  325 tgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||| |||||| |||| |||| ||||| ||||||  |||||||||| |||||||||||||    
T  42650424 tgtcactttaacaaaaa-aattagttttaaaataaatgtcgctttacatttctaatacaactttaa 42650360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 43738452 - 43738367
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaat--ttgtttcaaaatgaatgtcagtttacatttccaatacaactt 387  Q
    |||||||||||||| |||||||||  || ||||| ||||| ||   |||||| ||||||||||||| || |||||| |||||||||||    
T  43738452 tactccctccattttaaaatgagt--cattttagtaaaaaaaaaaattgttttaaaatgaatgtcacttcacattttcaatacaactt 43738367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 357
Target Start/End: Original strand, 7375242 - 7375298
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaat 357  Q
    ||||||||||| ||||||||||||||||  |||||| |||| || || |||||||||    
T  7375242 atactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattatttcaaaat 7375298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 12591264 - 12591216
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| |||||||  |||| ||||||||| |||||||||||||    
T  12591264 aaaatgagtgttactttagtcaaaataatttgttttaaaatgaatgtca 12591216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 365
Target Start/End: Complemental strand, 14373607 - 14373547
Alignment:
Q  305 tccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| ||| |||||||||||| ||||||| |||| || || ||| |||||||||||||    
T  14373607 tccctccgttttaaaatgagtgtcgctttagctaaaaaaaattattttaaaatgaatgtca 14373547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 26582923 - 26582967
Alignment:
Q  346 ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||||| ||||| | ||||||||||||||||||||||||    
T  26582923 ttgttttaaaataaatgttactttacatttccaatacaactttaa 26582967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 30006105 - 30006157
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaa 354  Q
    |||||||||||||| ||||||||| | ||||| ||||||| || |||||||||    
T  30006105 tactccctccattttaaaatgagtattactttggcaaaaaaaagttgtttcaa 30006157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 34047433 - 34047369
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtca 365  Q
    |||||| ||| ||| ||||||||||||  ||||||||||| ||  ||||||||||||||||||||    
T  34047433 tactccatccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtca 34047369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 390
Target Start/End: Complemental strand, 35149563 - 35149491
Alignment:
Q  319 aatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||||  ||||| ||  ||||||| |||| ||| ||| |||| |||||||||||||||||||    
T  35149563 aatgagtgtcactttaataaaaaaaaaattgtttcgaaataaatttcactttatatttccaatacaactttaa 35149491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 44557241 - 44557178
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| ||| ||| ||||||||| || |||||| ||||| ||||||||| |||||||||||||    
T  44557241 atactccatccgttttaaaatgagtttcgctttagtaaaaa-aatttgttttaaaatgaatgtca 44557178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 52293325 - 52293388
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||||| || |||||||  |||||||||||| |||||||| | |||||||||||    
T  52293325 atactccctccgtttcataacgagtgtcg-tttagcaaaaactatttgttttagaatgaatgtca 52293388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 1924863 - 1924774
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||  |||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  1924863 atactccctctgtttcaaaatgagtgtcactttagccaaaaaaatttgttttaaaatgaatgtcattttacattttcaatacaactttaa 1924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 29915494 - 29915583
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||||||||||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  29915494 tactccatccgtttcaaaatgagtgtcactttagtcaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29915583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 31275840 - 31275752
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||||||||| |||||| |||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  31275840 tactccatccgtttcaaaataagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 31275752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 19690034 - 19689945
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagc-aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttta 389  Q
    |||||||||| ||||||||||||||||||||||| | ||||| ||||||||| ||||||||||| | |||||||||| ||||||||||||    
T  19690034 atactccctctatttcaaaatgagtgtcactttaaccaaaaataatttgttttaaaatgaatgttactttacatttctaatacaacttta 19689945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 29927162 - 29927249
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||||||||||||||||  |||||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  29927162 tactccttccgtttcaaaatgagtgtcgttttagccaaaaaaatt-gtttcaaaatgaatgtcactttacatttccaatacaactttaa 29927249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 301 - 388
Target Start/End: Complemental strand, 23936781 - 23936694
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttt 388  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||  ||||||||||||||||| | ||||||||| |||| |||||||    
T  23936781 atactccctctgtttcaaaatgagtgtcactttagcaaaaaaaaactgtttcaaaatgaatgttactttacattttcaatgcaacttt 23936694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 32258675 - 32258764
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| ||||| ||| || |||||||| |||||| |||||| || |||||||||||||||||||| ||||||||| ||||||||||||||    
T  32258675 atactacctccgttttaagatgagtgttactttaacaaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 32258764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 17345337 - 17345246
Alignment:
Q  298 ttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| |||||||||||||||||||||||| |||||  |||| || |||||| ||||||||| ||| |||||||||| |||||||||||||    
T  17345337 ttaataccccctccatttcaaaatgagtgtcattttagtcaaaa-aaattgttttaaaatgaatatcactttacatttctaatacaactttaa 17345246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 303 - 380
Target Start/End: Complemental strand, 4850693 - 4850616
Alignment:
Q  303 actccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    ||||||||  |||||||||||||||| |||||||||||| || |||||||||||||||||||| |||  |||||||||    
T  4850693 actccctcattttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaat 4850616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 6143050 - 6143126
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| |||||||||||| |||| |||| |||| ||||||||||||| |||||||||||||| |||||||||    
T  6143050 tttcaaaatgaatgtcactttagccaaaaaaatt-gttttaaaatgaatgtcattttacatttccaattcaactttaa 6143126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 12828882 - 12828791
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagc---aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| ||||||||||| ||||| ||||||   ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||    
T  12828882 tactccatccgtttcaaaatgaatgtcattttagccaaaaaaaaaaattgtttcaaaatgaatttcactttacatttccaatacaactttaa 12828791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 30627057 - 30627133
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||| ||||||| |||| |||| ||||||||||||||    
T  30627057 tttcataatgagtgtcactttagctaaaa-aatttgtttcaaaataaatgtcactttatattttcaatacaactttaa 30627133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 34439606 - 34439525
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaacttt 388  Q
    ||||| ||| ||||||| ||||||||||   |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  34439606 cctccgttttaaaatgaatgtcactttaatcaaaaaaaattgtttcaaaatgaatgtcattttacatttccaatacaacttt 34439525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 26189462 - 26189550
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| |||||||||||||||| ||||| | |||| || ||||||||||||||||||   |||||||||||||| |||||||||    
T  26189462 tactccatccgtttcaaaatgagtgtcgctttaaccaaaaaaaattgtttcaaaatgaatgttgttttacatttccaatgcaactttaa 26189550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 10494948 - 10494872
Alignment:
Q  312 atttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| ||| |||||||||||||| |||| |  |||||| |||||||||||||||||||||||||||| |||||||||    
T  10494948 atttcacaatcagtgtcactttagccaaaaaa--ttgttttaaaatgaatgtcagtttacatttccaattcaactttaa 10494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 6140566 - 6140642
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| |||||||||||| |||| || |||||| ||||||||||||  |||||||||||||| |||||||||    
T  6140566 tttcaaaatgaatgtcactttagccaaaa-aagttgttttaaaatgaatgtcgctttacatttccaattcaactttaa 6140642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 28554788 - 28554735
Alignment:
Q  317 aaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagttta 370  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  28554788 aaaatgagtgtcgctttagcaaaaataatttgtttcaaaatgaatgtcatttta 28554735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 29399900 - 29399963
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| ||||||||||||||||  |||||||| || || ||||||||||||||||||||    
T  29399900 tactccctccgtttcaaaatgagtgtcgttttagcaacaaaaaattgtttcaaaatgaatgtca 29399963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 4124045 - 4123965
Alignment:
Q  309 tccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| |||||| ||||||||| |  ||| |||| |||||||||||||||||| |||||||||  |||||||||||||    
T  4124045 tccatttcataatgagcgtcactttaacctaaaaaatt-gtttcaaaatgaatgtcactttacatttttaatacaactttaa 4123965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 19416810 - 19416887
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttc 376  Q
    |||||||  ||||||| ||||||||||||||||||  ||||| ||  |||||||||||||||||||| ||||||||||    
T  19416810 aatactcaatccattttaaaatgagtgtcactttaataaaaaaaaaattgtttcaaaatgaatgtcactttacatttc 19416887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 380
Target Start/End: Complemental strand, 17246805 - 17246728
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    ||||||||||| ||||||||||||||||  |||||| |||| ||  ||||||||||||||||||| ||||  ||||||||    
T  17246805 atactccctccgtttcaaaatgagtgtcgttttagccaaaaaaa--tgtttcaaaatgaatgtcactttaagtttccaat 17246728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 233988 - 234051
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||  ||||||||||||||||  |||||| |||| || ||||||||||||||||||||    
T  233988 tactccctctgtttcaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaatgaatgtca 234051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 8052299 - 8052387
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| || || |||||||||||||||| |  ||| |  |||||| ||||||||||||| |||| ||||| |||||||||||||    
T  8052299 atactccctccgtt-cagaatgagtgtcactttaacccaaaaacattgttttaaaatgaatgtcactttatatttctaatacaactttaa 8052387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 380
Target Start/End: Complemental strand, 10540710 - 10540629
Alignment:
Q  299 taatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaat 380  Q
    ||||||| ||||| ||| ||||||||||||  |||||| |||| || |||||||||||| ||||||| |||  |||||||||    
T  10540710 taatacttcctccgttttaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaataaatgtcactttcaatttccaat 10540629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 30626846 - 30626911
Alignment:
Q  325 tgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||| |||| || |||||||||||| ||| | | ||||||||| ||||||||||||||    
T  30626846 tgtcactttagctaaaaaaaattgtttcaaaataaatattactttacattttcaatacaactttaa 30626911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 34519324 - 34519263
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgt 363  Q
    |||||| ||| ||| ||||||||||||  ||||||||||| || ||||||||||||||||||    
T  34519324 tactccatccgttttaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgt 34519263  T

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Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 34576533 - 34576586
Alignment:
Q  337 aaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||| || |||||| ||||||||| ||| ||||||||||||||||||||||||    
T  34576533 aaaaaaaaattgttttaaaatgaatatcattttacatttccaatacaactttaa 34576586  T

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Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 9940601 - 9940665
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| ||| |||||||||||||||| ||||| |||||| || |||||| ||||||| |||||    
T  9940601 atactccatccgtttcaaaatgagtgtcgctttaacaaaaaaaaattgttttaaaatgattgtca 9940665  T

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Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 11785255 - 11785212
Alignment:
Q  346 ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||    
T  11785255 ttgtttcaaaatga-tgtcactttacatttccaatacaactttaa 11785212  T

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Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 24163913 - 24163850
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||| ||| ||||||||||||| |||||| |||| || |||||| |||||||||||||    
T  24163913 atactccctccgttttaaaatgagtgtcattttagccaaaa-aaattgttttaaaatgaatgtca 24163850  T

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Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 3015919 - 3015958
Alignment:
Q  351 tcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  3015919 tcaaaatgaatgtcactttacattttcaatacaactttaa 3015958  T

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Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 390
Target Start/End: Complemental strand, 4132155 - 4132085
Alignment:
Q  319 aatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||||| |||| |||||| |||| |||| |||| ||||||||||||| |||||||||  |||||||||||||    
T  4132155 aatgagcgtcattttagccaaaaaaatt-gttttaaaatgaatgtcactttacatttttaatacaactttaa 4132085  T

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Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 390
Target Start/End: Complemental strand, 26669247 - 26669208
Alignment:
Q  351 tcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  26669247 tcaaaatgaatgtcactttatatttccaatacaactttaa 26669208  T

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Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 12063719 - 12063646
Alignment:
Q  293 gttatttaatactccctccatttcaaaatgagtgtcactttagca-aaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||| ||||||||||||| ||||||||||||||||  ||||| | ||||  | ||||||| ||||||||||||    
T  12063719 gttatctaatactccctccctttcaaaatgagtgtcgttttagaagaaaaataattgtttccaaatgaatgtca 12063646  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 365
Target Start/End: Complemental strand, 26405465 - 26405396
Alignment:
Q  296 atttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||||| ||| |||||||| ||| |||| ||||||||||  || || ||| |||||||||||||    
T  26405465 atttaatactccatccgtttcaaaacgagagtcattttagcaaaataaaattattttaaaatgaatgtca 26405396  T

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Target: scaffold0580 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 1595 - 1685
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttcc--aatacaactttaa 390  Q
    |||||||||| |||||||||||||||||||||||| |||| || || ||||||||||||||||| |||||||||||  |||||||||||||    
T  1595 tactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaatgtcactttacatttccaaaatacaactttaa 1685  T

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Target: scaffold0580; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 9334 - 9424
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttcc--aatacaactttaa 390  Q
    |||||||||| |||||||||||||||||||||||| |||| || || ||||||||||||||||| |||||||||||  |||||||||||||    
T  9334 tactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaatgtcactttacatttccaaaatacaactttaa 9424  T

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Target: scaffold0047 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 70654 - 70565
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||| ||||||||||||||||  |||||| |||| || |||||||||||||||||||| ||||||||| |||| |||||||||    
T  70654 atactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatgcaactttaa 70565  T

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Target: scaffold0189 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 13258 - 13169
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||| ||| |||||||||||||||||||||| | |||| || |||||| |||||||| |||| |||||||||||||||||| |||||    
T  13258 atactccttccgtttcaaaatgagtgtcactttaaccaaaaaaaattgttttaaaatgaacgtcactttacatttccaatacaattttaa 13169  T

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Target: scaffold0003 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 321687 - 321768
Alignment:
Q  307 cctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||| |||||||||||| |||||||||||| |  |||||| ||||||||||||  ||||||||||||||||||||||||    
T  321687 cctccattttaaaatgagtgtcgctttagcaaaaaaa--ttgttttaaaatgaatgtcgctttacatttccaatacaactttaa 321768  T

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Target: scaffold0332 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 4009 - 3946
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||||||| |||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  4009 tactccctccgtttcaaaatgagtgccgctttagcaaaaaaaatttgtttcaaaatgaatgtca 3946  T

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Target: scaffold0194 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 8096 - 8200
Alignment:
Q  295 tatttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaat---------ttgtttcaaaatgaatgtcagtttacatttccaatacaac 385  Q
    |||||| |||||||||| ||| ||||| ||||||||||||||||||| ||          |||||||||||||||||||| ||||||||| |||||||||    
T  8096 tatttattactccctccgttttaaaatcagtgtcactttagcaaaaaaaaaaaaaaaaaattgtttcaaaatgaatgtcaatttacattttcaatacaac 8195  T
Q  386 tttaa 390  Q
    |||||    
T  8196 tttaa 8200  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 153265 - 153330
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttagcaa-aaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||||||||||| ||||||| |||| ||| ||| || |||| |||||||||||||||    
T  153265 atactccctccatttcaaaataagtgtcattttaacaacaaaaaaattgtgtcaaaatgaatgtca 153330  T

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Target: scaffold0754 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0754
Description:

Target: scaffold0754; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 6749 - 6801
Alignment:
Q  300 aatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttc 352  Q
    |||||||||||| |||  |||||||||||||||||||||||| || |||||||    
T  6749 aatactccctccgttttgaaatgagtgtcactttagcaaaaaaaaattgtttc 6801  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 384
Target Start/End: Complemental strand, 3704 - 3621
Alignment:
Q  301 atactccctccatttcaaaatgagtgtcactttag-caaaaacaatttgtttcaaaatgaatgtcagtttacatttccaatacaa 384  Q
    ||||||||||| ||||||||||||||||  ||| | |||||| ||||| ||||||||||||||||| |||   ||||||||||||    
T  3704 atactccctccttttcaaaatgagtgtcgtttttgccaaaaataattt-tttcaaaatgaatgtcactttcagtttccaatacaa 3621  T

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Target: scaffold0119 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 1546 - 1585
Alignment:
Q  351 tcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  1546 tcaaaatgaatgtcactttatatttccaatacaactttaa 1585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 24939 - 24876
Alignment:
Q  302 tactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||||| ||| ||||||||||||||||  |||| | |||| || ||||||||||||||||||||    
T  24939 tactccatccgtttcaaaatgagtgtcgttttatccaaaaaaaattgtttcaaaatgaatgtca 24876  T

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Target: scaffold0060 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 31573 - 31667
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaat-ttgtttcaaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    |||| |||||| ||| ||||| ||| ||| ||||| ||||||||| ||  |||||| ||||||||||| | ||||||||||||||| || |||||    
T  31573 tttagtactccatccttttcataataagtatcactgtagcaaaaaaaaaattgttttaaaatgaatgttactttacatttccaataaaattttaa 31667  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 12219 - 12182
Alignment:
Q  353 aaaatgaatgtcagtttacatttccaatacaactttaa 390  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  12219 aaaatgaatgtcattttacatttccaatataactttaa 12182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 365
Target Start/End: Original strand, 45354 - 45411
Alignment:
Q  308 ctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    |||| ||||||||| ||||||  |||||| |||| || ||||||||||||||||||||    
T  45354 ctccgtttcaaaattagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtca 45411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 9845 - 9777
Alignment:
Q  297 tttaatactccctccatttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||| | ||||| ||||||||||| ||||  |||||| |||| || |||||| |||||||||||||    
T  9845 tttaatatttcctccgtttcaaaatgactgtcgttttagccaaaaaaaattgttttaaaatgaatgtca 9777  T

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Target: scaffold0048 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 62598 - 62650
Alignment:
Q  313 tttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtca 365  Q
    ||||||||||||| ||  ||||| ||||| || ||||||||||||||||||||    
T  62598 tttcaaaatgagtatcgttttagtaaaaaaaaattgtttcaaaatgaatgtca 62650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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