View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12530_high_6 (Length: 249)

Name: NF12530_high_6
Description: NF12530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12530_high_6
NF12530_high_6
[»] chr3 (79 HSPs)
chr3 (32-237)||(34015685-34015890)
chr3 (35-240)||(34014507-34014712)
chr3 (35-232)||(24376351-24376547)
chr3 (38-230)||(53101545-53101735)
chr3 (31-124)||(23091186-23091279)
chr3 (31-124)||(28777717-28777810)
chr3 (35-120)||(31937034-31937119)
chr3 (36-124)||(31938337-31938425)
chr3 (40-240)||(43392630-43392829)
chr3 (35-157)||(27750428-27750550)
chr3 (35-124)||(23073404-23073493)
chr3 (37-122)||(35759263-35759348)
chr3 (33-124)||(54354421-54354512)
chr3 (34-124)||(21727908-21727998)
chr3 (38-124)||(43394084-43394170)
chr3 (38-124)||(52525389-52525475)
chr3 (34-124)||(54353021-54353111)
chr3 (31-124)||(17742323-17742416)
chr3 (31-124)||(19043643-19043736)
chr3 (39-124)||(46902334-46902419)
chr3 (37-217)||(27749107-27749287)
chr3 (35-122)||(2232601-2232688)
chr3 (35-122)||(17117431-17117518)
chr3 (37-124)||(37609322-37609409)
chr3 (34-124)||(17116200-17116290)
chr3 (39-124)||(5691124-5691209)
chr3 (36-93)||(10979236-10979293)
chr3 (39-240)||(23072063-23072262)
chr3 (35-124)||(46986120-46986209)
chr3 (31-124)||(53764424-53764516)
chr3 (35-95)||(11348530-11348590)
chr3 (33-157)||(53101770-53101894)
chr3 (37-124)||(53765996-53766083)
chr3 (39-122)||(55209785-55209868)
chr3 (36-124)||(2233335-2233423)
chr3 (37-113)||(47429628-47429704)
chr3 (31-122)||(50881141-50881232)
chr3 (31-93)||(46903685-46903747)
chr3 (35-88)||(35758063-35758116)
chr3 (34-94)||(5689723-5689783)
chr3 (52-124)||(21729218-21729290)
chr3 (39-83)||(37610797-37610841)
chr3 (36-124)||(53178701-53178789)
chr3 (37-113)||(53180845-53180920)
chr3 (146-241)||(31937164-31937259)
chr3 (59-122)||(50879517-50879580)
chr3 (34-113)||(52521925-52522004)
chr3 (146-240)||(37610658-37610752)
chr3 (39-96)||(15290547-15290604)
chr3 (146-231)||(28777591-28777676)
chr3 (32-87)||(11346808-11346863)
chr3 (148-231)||(43393957-43394040)
chr3 (180-242)||(21729081-21729143)
chr3 (170-240)||(52522079-52522149)
chr3 (170-231)||(17740983-17741044)
chr3 (170-231)||(19042303-19042364)
chr3 (35-124)||(28776447-28776536)
chr3 (146-231)||(46903528-46903613)
chr3 (146-231)||(47431091-47431176)
chr3 (39-124)||(47431217-47431302)
chr3 (180-240)||(11346975-11347035)
chr3 (38-86)||(33113378-33113426)
chr3 (54-86)||(46903632-46903664)
chr3 (160-231)||(5689862-5689933)
chr3 (52-95)||(21729380-21729423)
chr3 (54-88)||(2233311-2233345)
chr3 (146-240)||(28776577-28776671)
chr3 (180-246)||(35758167-35758233)
chr3 (146-240)||(37609450-37609544)
chr3 (146-231)||(23073278-23073363)
chr3 (146-231)||(46902460-46902545)
chr3 (54-83)||(53764506-53764535)
chr3 (54-86)||(17116280-17116312)
chr3 (180-240)||(35759126-35759186)
chr3 (32-92)||(44115427-44115487)
chr3 (36-92)||(44116748-44116804)
chr3 (54-86)||(46902409-46902441)
chr3 (163-231)||(50879833-50879901)
chr3 (180-240)||(50881011-50881071)
[»] chr7 (77 HSPs)
chr7 (35-232)||(27071019-27071215)
chr7 (35-232)||(27207098-27207294)
chr7 (35-232)||(26006666-26006862)
chr7 (36-242)||(45688867-45689071)
chr7 (34-227)||(42611433-42611626)
chr7 (36-241)||(44231755-44231960)
chr7 (37-178)||(7057306-7057446)
chr7 (32-122)||(29188062-29188152)
chr7 (22-124)||(44417443-44417545)
chr7 (31-124)||(19217622-19217715)
chr7 (33-124)||(29186661-29186752)
chr7 (34-124)||(44420552-44420642)
chr7 (39-124)||(3537429-3537514)
chr7 (33-122)||(32519781-32519870)
chr7 (31-124)||(48792438-48792531)
chr7 (36-124)||(13750666-13750754)
chr7 (32-124)||(43962599-43962691)
chr7 (35-124)||(43113673-43113762)
chr7 (35-124)||(48793546-48793635)
chr7 (36-124)||(37237255-37237343)
chr7 (31-113)||(3538604-3538686)
chr7 (35-124)||(13597143-13597232)
chr7 (36-120)||(9391519-9391603)
chr7 (31-95)||(19008926-19008990)
chr7 (36-124)||(27072684-27072772)
chr7 (36-124)||(27205541-27205629)
chr7 (150-239)||(9357692-9357781)
chr7 (39-240)||(45398545-45398746)
chr7 (31-87)||(43960940-43960996)
chr7 (33-124)||(18788590-18788681)
chr7 (35-124)||(9392845-9392934)
chr7 (34-95)||(19016756-19016817)
chr7 (37-86)||(26005412-26005461)
chr7 (41-122)||(32518426-32518507)
chr7 (40-112)||(12630507-12630579)
chr7 (35-102)||(7011632-7011699)
chr7 (35-102)||(7026990-7027057)
chr7 (34-124)||(37235811-37235901)
chr7 (146-241)||(44417586-44417681)
chr7 (146-240)||(13597272-13597366)
chr7 (154-232)||(37237131-37237209)
chr7 (31-84)||(13599268-13599321)
chr7 (37-102)||(18787149-18787214)
chr7 (35-124)||(44230426-44230515)
chr7 (39-124)||(45400040-45400125)
chr7 (165-244)||(7011782-7011861)
chr7 (165-244)||(7027140-7027219)
chr7 (146-240)||(18787277-18787371)
chr7 (149-231)||(19217759-19217841)
chr7 (54-88)||(44230505-44230539)
chr7 (146-240)||(45399905-45399999)
chr7 (146-231)||(44748467-44748552)
chr7 (151-240)||(47536748-47536837)
chr7 (36-92)||(24653733-24653789)
chr7 (36-88)||(44748569-44748621)
chr7 (26-73)||(8661668-8661715)
chr7 (154-240)||(22794219-22794306)
chr7 (35-93)||(42612601-42612660)
chr7 (54-88)||(9392821-9392855)
chr7 (54-88)||(13750642-13750676)
chr7 (54-88)||(18787226-18787260)
chr7 (54-88)||(18788566-18788600)
chr7 (54-88)||(43113752-43113786)
chr7 (146-240)||(43113803-43113897)
chr7 (35-84)||(13749062-13749111)
chr7 (187-244)||(26005521-26005578)
chr7 (54-87)||(27072661-27072694)
chr7 (54-87)||(27205619-27205652)
chr7 (170-231)||(29186817-29186878)
chr7 (146-231)||(29187934-29188019)
chr7 (39-84)||(44746729-44746774)
chr7 (59-123)||(12630586-12630650)
chr7 (54-86)||(19217705-19217737)
chr7 (187-243)||(27072546-27072602)
chr7 (187-243)||(27205711-27205767)
chr7 (36-84)||(43115097-43115144)
chr7 (59-87)||(44746809-44746837)
[»] chr8 (35 HSPs)
chr8 (34-242)||(3714432-3714640)
chr8 (34-241)||(22013153-22013359)
chr8 (35-241)||(22012156-22012361)
chr8 (36-232)||(43133971-43134167)
chr8 (36-242)||(3713063-3713267)
chr8 (31-124)||(9244060-9244153)
chr8 (36-124)||(26364741-26364829)
chr8 (34-122)||(9245463-9245552)
chr8 (32-124)||(43584404-43584496)
chr8 (34-122)||(20308921-20309009)
chr8 (34-122)||(21095554-21095642)
chr8 (35-122)||(41636830-41636917)
chr8 (38-124)||(34642667-34642753)
chr8 (39-95)||(30640801-30640857)
chr8 (37-124)||(522127-522214)
chr8 (36-112)||(41638194-41638270)
chr8 (36-101)||(26366247-26366312)
chr8 (146-231)||(41636960-41637045)
chr8 (36-124)||(20310082-20310170)
chr8 (36-124)||(21096715-21096803)
chr8 (39-124)||(30644734-30644819)
chr8 (36-124)||(31202966-31203054)
chr8 (146-240)||(30640926-30641020)
chr8 (39-96)||(43586002-43586059)
chr8 (37-113)||(34644001-34644076)
chr8 (54-88)||(41638158-41638192)
chr8 (146-231)||(9245335-9245420)
chr8 (146-240)||(26366089-26366183)
chr8 (170-231)||(9244218-9244279)
chr8 (55-84)||(26364820-26364849)
chr8 (180-240)||(20309086-20309146)
chr8 (180-240)||(21095719-21095779)
chr8 (60-88)||(26366200-26366228)
chr8 (54-86)||(34642743-34642775)
chr8 (31-79)||(38665941-38665989)
[»] chr4 (53 HSPs)
chr4 (33-242)||(34122714-34122923)
chr4 (34-242)||(48462896-48463104)
chr4 (35-240)||(34121298-34121503)
chr4 (31-124)||(38031163-38031256)
chr4 (34-124)||(7261573-7261663)
chr4 (35-124)||(8815387-8815476)
chr4 (39-124)||(17357893-17357978)
chr4 (33-120)||(22621864-22621951)
chr4 (36-124)||(10802889-10802977)
chr4 (36-124)||(38032450-38032538)
chr4 (34-95)||(10804254-10804315)
chr4 (37-124)||(23758001-23758088)
chr4 (34-243)||(48462140-48462348)
chr4 (35-124)||(17356360-17356449)
chr4 (35-129)||(18091579-18091673)
chr4 (31-124)||(8814130-8814223)
chr4 (35-124)||(34095689-34095778)
chr4 (36-113)||(35191817-35191894)
chr4 (54-122)||(48081562-48081630)
chr4 (36-124)||(56233724-56233812)
chr4 (36-124)||(56235050-56235138)
chr4 (33-111)||(48080267-48080345)
chr4 (31-89)||(48081392-48081450)
chr4 (39-124)||(48499367-48499452)
chr4 (154-241)||(23757864-23757951)
chr4 (39-102)||(48081642-48081705)
chr4 (146-240)||(17356490-17356584)
chr4 (146-240)||(34095554-34095648)
chr4 (38-124)||(35193226-35193312)
chr4 (161-231)||(35927020-35927090)
chr4 (146-240)||(38032315-38032409)
chr4 (40-112)||(48501365-48501437)
chr4 (57-112)||(5433449-5433504)
chr4 (36-75)||(22624389-22624428)
chr4 (32-90)||(5470214-5470272)
chr4 (54-88)||(35193202-35193236)
chr4 (146-231)||(22621996-22622081)
chr4 (67-120)||(22623177-22623230)
chr4 (146-231)||(48501228-48501313)
chr4 (54-87)||(48501330-48501363)
chr4 (165-241)||(8815251-8815327)
chr4 (180-240)||(18091743-18091803)
chr4 (165-244)||(10804086-10804165)
chr4 (31-90)||(23756604-23756662)
chr4 (187-241)||(7261437-7261491)
chr4 (54-88)||(7261549-7261583)
chr4 (54-88)||(10802967-10803001)
chr4 (146-240)||(48499493-48499586)
chr4 (54-88)||(56233802-56233836)
chr4 (54-87)||(8814213-8814246)
chr4 (36-92)||(5574200-5574256)
chr4 (171-231)||(38031322-38031382)
chr4 (54-82)||(48080348-48080376)
[»] chr6 (32 HSPs)
chr6 (36-231)||(29477759-29477954)
chr6 (36-240)||(18574208-18574411)
chr6 (34-124)||(11801372-11801462)
chr6 (35-124)||(18572884-18572973)
chr6 (35-124)||(32349067-32349156)
chr6 (36-113)||(34995352-34995429)
chr6 (36-124)||(3000823-3000911)
chr6 (35-124)||(32713913-32714002)
chr6 (34-122)||(32347806-32347894)
chr6 (32-124)||(34996791-34996883)
chr6 (35-124)||(29479224-29479313)
chr6 (31-93)||(32712350-32712412)
chr6 (146-240)||(21094534-21094628)
chr6 (154-227)||(21095287-21095360)
chr6 (146-231)||(32348941-32349026)
chr6 (39-82)||(19383219-19383262)
chr6 (54-88)||(29479200-29479234)
chr6 (146-240)||(32347937-32348031)
chr6 (146-230)||(11801247-11801331)
chr6 (37-136)||(19788248-19788347)
chr6 (57-88)||(34995432-34995463)
chr6 (180-231)||(34996665-34996716)
chr6 (161-231)||(3000697-3000767)
chr6 (54-88)||(32713889-32713923)
chr6 (146-240)||(34995480-34995574)
chr6 (54-88)||(34996767-34996801)
chr6 (35-84)||(19761941-19761990)
chr6 (35-80)||(27719734-27719779)
chr6 (154-223)||(27719872-27719941)
chr6 (59-88)||(32712438-32712467)
chr6 (146-231)||(32712484-32712569)
chr6 (146-231)||(32713787-32713872)
[»] chr2 (18 HSPs)
chr2 (36-240)||(5033478-5033682)
chr2 (35-232)||(5034738-5034935)
chr2 (35-240)||(16604104-16604308)
chr2 (33-124)||(23833900-23833991)
chr2 (33-124)||(27892366-27892457)
chr2 (34-124)||(27891104-27891194)
chr2 (36-124)||(16602725-16602813)
chr2 (37-142)||(19577338-19577443)
chr2 (35-124)||(38243985-38244074)
chr2 (36-113)||(23832968-23833045)
chr2 (36-124)||(43814521-43814609)
chr2 (38-124)||(26388220-26388306)
chr2 (74-129)||(15496083-15496138)
chr2 (32-94)||(43814641-43814703)
chr2 (54-96)||(43814599-43814641)
chr2 (165-231)||(16602873-16602939)
chr2 (54-88)||(38243961-38243995)
chr2 (180-240)||(370925-370985)
[»] chr1 (43 HSPs)
chr1 (35-241)||(18820669-18820875)
chr1 (31-124)||(52086622-52086715)
chr1 (31-124)||(51693142-51693235)
chr1 (37-124)||(25181502-25181589)
chr1 (31-124)||(51468334-51468427)
chr1 (35-124)||(7110225-7110314)
chr1 (34-102)||(40187601-40187669)
chr1 (42-124)||(50485026-50485108)
chr1 (36-124)||(17244175-17244263)
chr1 (35-96)||(1823350-1823411)
chr1 (36-113)||(5488908-5488985)
chr1 (35-124)||(17245694-17245783)
chr1 (35-122)||(18819261-18819348)
chr1 (35-129)||(52759362-52759456)
chr1 (39-124)||(45229633-45229718)
chr1 (35-124)||(51468931-51469020)
chr1 (33-96)||(50483508-50483570)
chr1 (22-88)||(52761602-52761668)
chr1 (51-124)||(38235179-38235252)
chr1 (37-124)||(5488502-5488589)
chr1 (146-240)||(7111370-7111464)
chr1 (46-124)||(7111505-7111583)
chr1 (40-102)||(47532961-47533023)
chr1 (44-93)||(45228283-45228332)
chr1 (181-240)||(47533749-47533808)
chr1 (146-229)||(52761502-52761585)
chr1 (31-93)||(40723097-40723159)
chr1 (149-231)||(51693279-51693361)
chr1 (59-113)||(52087815-52087869)
chr1 (146-231)||(7110355-7110440)
chr1 (38-95)||(47533913-47533970)
chr1 (54-86)||(51693225-51693257)
chr1 (180-240)||(52759526-52759586)
chr1 (146-213)||(40187731-40187798)
chr1 (57-88)||(45228356-45228387)
chr1 (54-84)||(5488579-5488609)
chr1 (54-88)||(50485002-50485036)
chr1 (54-88)||(51468417-51468451)
chr1 (59-88)||(5488873-5488902)
chr1 (170-231)||(50483664-50483724)
chr1 (35-92)||(51089876-51089933)
chr1 (33-85)||(21202960-21203012)
chr1 (146-230)||(21203140-21203224)
[»] chr5 (36 HSPs)
chr5 (35-124)||(12373751-12373840)
chr5 (35-124)||(18654295-18654384)
chr5 (31-124)||(12372309-12372402)
chr5 (31-124)||(13276814-13276907)
chr5 (35-124)||(39350675-39350764)
chr5 (36-124)||(8447077-8447165)
chr5 (34-122)||(18655684-18655772)
chr5 (33-124)||(19230103-19230194)
chr5 (24-124)||(35952466-35952566)
chr5 (36-124)||(39349480-39349568)
chr5 (38-124)||(19228840-19228926)
chr5 (31-124)||(9083326-9083419)
chr5 (34-124)||(9081977-9082067)
chr5 (39-124)||(13278261-13278346)
chr5 (34-124)||(6801972-6802062)
chr5 (37-111)||(25001643-25001717)
chr5 (31-88)||(4031876-4031933)
chr5 (36-96)||(6803682-6803742)
chr5 (155-241)||(13278125-13278211)
chr5 (31-124)||(39164056-39164144)
chr5 (146-240)||(19229968-19230062)
chr5 (154-240)||(4031958-4032046)
chr5 (146-231)||(19228967-19229052)
chr5 (151-240)||(42962152-42962241)
chr5 (35-95)||(1012120-1012180)
chr5 (180-240)||(12372477-12372537)
chr5 (38-88)||(4033031-4033081)
chr5 (178-240)||(6803520-6803582)
chr5 (54-88)||(9082057-9082091)
chr5 (54-88)||(39164134-39164168)
chr5 (59-88)||(6803630-6803659)
chr5 (54-87)||(13276897-13276930)
chr5 (146-231)||(39349609-39349694)
chr5 (35-95)||(1010828-1010888)
chr5 (180-239)||(14356589-14356649)
chr5 (54-86)||(39349558-39349590)
[»] scaffold0878 (3 HSPs)
scaffold0878 (34-124)||(3057-3147)
scaffold0878 (54-88)||(1847-1881)
scaffold0878 (54-88)||(3033-3067)
[»] scaffold0141 (2 HSPs)
scaffold0141 (31-124)||(35315-35408)
scaffold0141 (36-124)||(31033-31121)
[»] scaffold0049 (2 HSPs)
scaffold0049 (31-124)||(79404-79497)
scaffold0049 (36-124)||(83691-83779)
[»] scaffold1425 (2 HSPs)
scaffold1425 (35-122)||(1633-1720)
scaffold1425 (34-122)||(132-220)
[»] scaffold0018 (1 HSPs)
scaffold0018 (36-122)||(25377-25463)
[»] scaffold0026 (2 HSPs)
scaffold0026 (32-124)||(104297-104389)
scaffold0026 (171-240)||(104405-104474)
[»] scaffold0035 (1 HSPs)
scaffold0035 (31-95)||(21131-21195)
[»] scaffold0349 (2 HSPs)
scaffold0349 (35-80)||(9156-9201)
scaffold0349 (154-223)||(9294-9363)


Alignment Details
Target: chr3 (Bit Score: 174; Significance: 1e-93; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 32 - 237
Target Start/End: Complemental strand, 34015890 - 34015685
Alignment:
Q  32 tttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatcttt 131  Q
    |||||||||||||||| || |||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  34015890 tttaggcttaattgatttgtcggtcccttaagttatttcttttattcaatttggtcccataagtcataaatgtcgcaaacacatcctttaactcatcttt 34015791  T
Q  132 cgttaatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34015790 cgttaatcaatgtgatcccctcaaaaaggagatcgttcaattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 34015691  T
Q  232 accttc 237  Q
    | ||||    
T  34015690 atcttc 34015685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 35 - 240
Target Start/End: Original strand, 34014507 - 34014712
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgt 134  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| ||    
T  34014507 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataaatcttaactgtcgcaaacacatcccttaactcaccttttgt 34014606  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcacc 234  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||   ||||||||||| |||||||||||| |    
T  34014607 taatcaatgtgatcccctcaaaaaggagatcgttggataagggaaatctaccagatcttatggtgtatcacacccacctgattgacttactttcttcatc 34014706  T
Q  235 ttcttc 240  Q
    ||||||    
T  34014707 ttcttc 34014712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 24376547 - 24376351
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgt 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||| ||| |||||||||||||||||||| || || |    
T  24376547 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtctcataagttttaacagtcacaaacacatcccttaactcacctatcat 24376448  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttca 232  Q
    |||| ||||||||||||||||||| ||||||||| ||| || || ||||||||||||||||  |||||||||||||||||||| ||||| ||||||||    
T  24376447 taattaatgtgatcccctcaaaaaagagatcgttggataagagaggtctaccagatcttataatgtatcaccaacacctgatt-atttaatttcttca 24376351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 38 - 230
Target Start/End: Original strand, 53101545 - 53101735
Alignment:
Q  38 cttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgttaa 137  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| || |||| || ||| | | ||||||    ||||||| ||| |  |||||||    
T  53101545 cttaattgatctgccggtcctttaatttatt-cttttattcaatttgggcctataactcttaattttagcaaactggccccttaa-tcacccgtcgttaa 53101642  T
Q  138 tcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttctt 230  Q
    |||| ||| |||| ||||||  ||||||||||||| | ||| |||||||||||||||| ||||||||||||||| | ||| ||||||||||||    
T  53101643 tcaacgtggtcccttcaaaatagagatcgttcgataaaggatgtctaccagatcttatagtgtatcaccaacacttaatttatttactttctt 53101735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 23091186 - 23091279
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| || |||||||    
T  23091186 ttttaggcttaattgatctgccggtcttttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtctcttaact 23091279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 28777810 - 28777717
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||| || ||||||| ||||||||||    
T  28777810 ttttaggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaact 28777717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 31937034 - 31937119
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatccctt 120  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||    
T  31937034 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctt 31937119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 31938425 - 31938337
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||||    
T  31938425 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaact 31938337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 43392630 - 43392829
Alignment:
Q  40 taattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgttaatc 139  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||| ||| ||||| |||| || ||   ||| ||    
T  43392630 taattgatctgtcggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaagcacgtccctgaacttat-ttcttttattc 43392728  T
Q  140 aatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttctt 239  Q
    ||| || ||||||||| |||||||||||  ||| || || ||||| ||||| |||| ||||| ||||||||||  ||| ||||| |||||||  ||||||    
T  43392729 aatttggtcccctcaagaaggagatcgtcggataagtgaggtctatcagattttatagtgtaccaccaacaccaaatttatttattttcttcttcttctt 43392828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 27750550 - 27750428
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgt 134  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||||| |||||||  ||| | |  ||||||||||||||||||| ||| | ||    
T  27750550 aggctcaattgatctgccagtcctttaatttatttcttttattcaatttggtctcataagttttaattttttcaaacacatcccttaactcgtctgttgt 27750451  T
Q  135 taatcaatgtgatcccctcaaaa 157  Q
    |||| || |||||||||||||||    
T  27750450 taattaacgtgatcccctcaaaa 27750428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 23073493 - 23073404
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||| |  ||||||||||    
T  23073493 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaagatgtcccttaact 23073404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 35759348 - 35759263
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||| || ||||||| ||||||||    
T  35759348 gcttaattgatctgccggtcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaa 35759263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 54354512 - 54354421
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||| ||||| || ||||||| ||||||||||    
T  54354512 ttaggcttaattgatctgccggtcccttaacctatttcttttatttaatttggtcccttaagtcttaactttctcaaacacgtcccttaact 54354421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 21727908 - 21727998
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||||| || ||||||  ||||||||||    
T  21727908 taggcttaattgatctgccggtcccataacttatttcttttattcaatttggtctcataagtcttaactttctcaaacatgtcccttaact 21727998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 43394170 - 43394084
Alignment:
Q  38 cttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| || |||| || ||||||||||    
T  43394170 cttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaagacgtcccttaact 43394084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 52525475 - 52525389
Alignment:
Q  38 cttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||| || |||||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||    
T  52525475 cttaattgatttgtcggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcccttaact 52525389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 54353021 - 54353111
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |  ||||||  ||||||||||    
T  54353021 taggcttaattgatctgacggtcctttaacttatttcttttattcaatttgatcccataagtcttaactttatcaaacatgtcccttaact 54353111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 17742416 - 17742323
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||||    
T  17742416 ttttaggcttaatacatctgccgatcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaact 17742323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 19043736 - 19043643
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||||    
T  19043736 ttttaggcttaatacatctgccgatcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaact 19043643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 46902334 - 46902419
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||| || ||||||| ||||||||||    
T  46902334 ttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacgtcccttaact 46902419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 217
Target Start/End: Original strand, 27749107 - 27749287
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgtta 136  Q
    ||||||||||||| ||||| | ||||||||| ||||||||||||||| ||| |||||||| ||||| ||  ||||  |||||||||||||| | || |||    
T  27749107 gcttaattgatctaccggttccttaacttatgtcttttattcaatttagtcacataagtcttaactttcttaaacgtatcccttaactcatttgtcatta 27749206  T
Q  137 atcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgatt 217  Q
    ||||| ||  | |||||||||  ||||| ||| ||| | | |  |||| |||||||||| ||||||||||||||| |||||    
T  27749207 atcaacgttgttccctcaaaatagagattgttggataaagaagatctatcagatcttatagtgtatcaccaacacttgatt 27749287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 2232601 - 2232688
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||| || |||| || ||||||||    
T  2232601 aggcttaattgatctgccgatcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaatacgtcccttaa 2232688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 17117518 - 17117431
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| ||| | || ||||||| ||||||||    
T  17117518 aggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtctcataagtcttaagtttctcaaacacgtcccttaa 17117431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 37609322 - 37609409
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||||| || ||||||| ||||| ||||    
T  37609322 gcttaattgatctgccggtcctttaacttatttcttttatttaatttggtcatataagtcttaactttctcaaacacgtccctcaact 37609409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 17116200 - 17116290
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||  ||| | || ||||||| ||||||||||    
T  17116200 taggcttaattgatctgccgatcccttaacttatttcttttattcaatttggtctcataagtgttaagtttctcaaacacgtcccttaact 17116290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 5691209 - 5691124
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||| | || ||||||| ||||||||||    
T  5691209 ttaattgatctgccggtcccttaacttatttcttttattcaatttagtcacataagtcttaattttctcaaacacgtcccttaact 5691124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 10979293 - 10979236
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataa 93  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10979293 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataa 10979236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 240
Target Start/End: Original strand, 23072063 - 23072262
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgttaat 138  Q
    ||||||||||||| ||||| |||| | ||||| ||||||||||||||||||||||||| ||||| || |||| || | |||||||| || ||   ||| |    
T  23072063 ttaattgatctgctggtcccttaattcatttcatttattcaatttggtcccataagtcttaactttctcaaagacgt-ccttaacttat-ttcttttatt 23072160  T
Q  139 caatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttct 238  Q
    |||| || ||||||||| |||||||||||  ||| || ||  |||| ||||| |||| ||||| | |||||||| |||| |||||||||||||  |||||    
T  23072161 caatttggtcccctcaagaaggagatcgtcggataagtgagatctatcagattttatagtgtaccgccaacaccagatttatttactttcttcttcttct 23072260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 46986209 - 46986120
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||| |||||| || |||| ||||||||||||||||||||||||| ||||||| ||||| || ||||||| ||||||||||    
T  46986209 aggcttaattgatttgccggccccttaatttatttcttttattcaatttggtccaataagtcttaactctctcaaacacgtcccttaact 46986120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 53764424 - 53764516
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||| || ||||||| ||| ||||||    
T  53764424 ttttaggtttaattgatctaccggtcctttaacttattt-ttttattcaatttggtctcataagtcttaactttctcaaacacgtcctttaact 53764516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 11348590 - 11348530
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagt 95  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  11348590 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagt 11348530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 53101894 - 53101770
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttc 132  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || ||| | | ||||||   ||||| ||||||  | ||    
T  53101894 ttaggcttaattgatctgccggtcccttaagttatttcttttattcaatttggtcctataattcttaattttagcaaactggtccctcaactcacatgtc 53101795  T
Q  133 gttaatcaatgtgatcccctcaaaa 157  Q
    ||| ||||| ||| |||||||||||    
T  53101794 gttgatcaacgtggtcccctcaaaa 53101770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 53766083 - 53765996
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||||| ||| | || ||||||| ||||||||||    
T  53766083 gcttaattgatctgcgggtcccttaacttatttcttttattcaatttggttccgtaagtcttaattttctcaaacacgtcccttaact 53765996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 55209785 - 55209868
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||  ||||| || ||||||| ||||||||    
T  55209785 ttaattgatctaccggtcccttaacttatttcttttattcaatttggttccataagttttaactttctcaaacacgtcccttaa 55209868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 2233423 - 2233335
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| |||| |||||||| ||||| |  ||||||  ||||||||||    
T  2233423 ggcttaattgatctgtcggtcccttaacttatttcttttattcaattcggtctcataagtcttaactttgtcaaacatgtcccttaact 2233335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 47429628 - 47429704
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacac 113  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||    
T  47429628 gcttaattgatctgcatgtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 47429704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 50881232 - 50881141
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    |||| |||||||||||| || |||||| ||||||||||||||||||||||||||  | |||||||| ||||| || ||||||| ||||||||    
T  50881232 tttttggcttaattgatgtgtcggtcccttaacttatttcttttattcaatttgaccacataagtcttaactttctcaaacacgtcccttaa 50881141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 46903747 - 46903685
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataa 93  Q
    |||| ||||||||||||||  | |||| |||||||||||||||||||||||||||||||||||    
T  46903747 tttttggcttaattgatctttcagtcccttaacttatttcttttattcaatttggtcccataa 46903685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 35758063 - 35758116
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  35758063 aggcttaatcaatctgccggtcccttaacttatttcttttattcaatttggtcc 35758116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 5689723 - 5689783
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataag 94  Q
    ||||||||||||||||| || ||| ||| ||||||||||||||| ||||||||||||||||    
T  5689723 taggcttaattgatctgtcgctcccttagcttatttcttttattaaatttggtcccataag 5689783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 21729290 - 21729218
Alignment:
Q  52 cggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||| |||| |||||||||||||||||||| |||||||||||  ||||| || ||||||| ||||||||||    
T  21729290 cggtcccttaatttatttcttttattcaatttagtcccataagttctaactttctcaaacacgtcccttaact 21729218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 37610841 - 37610797
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaattt 83  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  37610841 ttaattgatctgccggtcccttaacttatttcttttattcaattt 37610797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 53178701 - 53178789
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||| |  |||||| | ||||| || ||||||| | ||||||||    
T  53178701 ggcttaattgatctgccgatcccttaacttattttttttattcaatttgatttcataagccttaactttctcaaacacgttccttaact 53178789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 53180920 - 53180845
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacac 113  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||| || |||||||| ||||| || |||||||    
T  53180920 gcttaattgatttgccggtcccttaacttattt-ttttattcaatttgatctcataagtcgtaactttctcaaacac 53180845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 31937164 - 31937259
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttct 241  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||| ||||| |||| ||||||||||||||||| |||  ||||||||||||  ||||||||    
T  31937164 atcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttttttactttcttcttcttcttct 31937259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 50879517 - 50879580
Alignment:
Q  59 ttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||||||||||||||||||||||||||||||| || ||||| ||  |||||| ||||||||    
T  50879517 ttaacttatttcttttattcaatttggtcccataaatcttaactttcttaaacacgtcccttaa 50879580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 52521925 - 52522004
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacac 113  Q
    |||| ||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||  || ||||| || |||||||    
T  52521925 taggtttaattgatctgctggtcccttaacttatttctttaattcaatttggtctcatagatcttaactttctcaaacac 52522004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 37610752 - 37610658
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| |||||  ||| |||| ||||| ||| ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||  |||||||    
T  37610752 atcccctaaaaaaaaagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttcttc 37610658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 15290604 - 15290547
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtc 96  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||| || ||||||||    
T  15290604 ttaattgatctgtcggtcccttaacttatttcttttatttaatttgatcacataagtc 15290547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 28777676 - 28777591
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||| ||||| |||| |||||||| |||||||| ||| |||||||||||||    
T  28777676 atcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttc 28777591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 11346808 - 11346863
Alignment:
Q  32 tttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtc 87  Q
    |||| |||||||||||||| |||||| |||| |||||||||||||| |||||||||    
T  11346808 tttatgcttaattgatctgtcggtcccttaatttatttcttttatttaatttggtc 11346863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 43394040 - 43393957
Alignment:
Q  148 cccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||| ||||| |||| |||| ||||| ||| ||||| ||||| |||  ||||||||||||||||| ||| |||||||||||||    
T  43394040 cccctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatttatttactttcttc 43393957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 21729143 - 21729081
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttctc 242  Q
    |||||||| || |||| |||||||| |||||||| ||| |||||||||||||| |||||||||    
T  21729143 gtctaccatattttatagtgtatcatcaacacctaatttatttactttcttcatcttcttctc 21729081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 52522079 - 52522149
Alignment:
Q  170 gattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||| ||| ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||  |||||||    
T  52522079 gattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttcttc 52522149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 17740983 - 17741044
Alignment:
Q  170 gattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||| ||| ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||    
T  17740983 gattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 17741044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 19042303 - 19042364
Alignment:
Q  170 gattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||| ||| ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||    
T  19042303 gattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 19042364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 28776447 - 28776536
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||  | ||||||||| |||||| |||||||||||||| ||| |||| || ||| | || ||||||  ||||||||||    
T  28776447 aggcttaattgatctatcagtcctttaatttattttttttattcaatttgatcctataaatcttaattttctcaaacaagtcccttaact 28776536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 46903613 - 46903528
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| |||||  ||| |||| ||||| ||| |||||  |||| |||| ||||||||||||||||| ||| |||||||||||||    
T  46903613 atcccctaaaaaaaaagaccgttggattacggaggtctattagattttatagtgtatcaccaacacctaatttatttactttcttc 46903528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 47431176 - 47431091
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| |||| ||||| ||| |||||  |||| |||| |||||||||| |||||| ||| |||||||||||||    
T  47431176 atcccctaaaaaaagagaccgttggattatggaggtctattagattttatagtgtatcacccacacctaatttatttactttcttc 47431091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 47431302 - 47431217
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||| || | |||| |||| |||||||||||||||||||||||| |||||||  ||||| |  ||||||| | ||||||||    
T  47431302 ttaattgatttgtcagtcccttaatttatttcttttattcaatttggtctcataagttttaactttttcaaacacgttccttaact 47431217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 11346975 - 11347035
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    |||||||| ||  ||| ||||||||||||||||| ||| |||||||||||||| |||||||    
T  11346975 gtctaccatattgtatagtgtatcaccaacacctaatttatttactttcttcatcttcttc 11347035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 33113426 - 33113378
Alignment:
Q  38 cttaattgatctgccggtcctttaacttatttcttttattcaatttggt 86  Q
    |||||||||||| ||| ||| |||| |||||||||||||||||||||||    
T  33113426 cttaattgatctaccgatcccttaatttatttcttttattcaatttggt 33113378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 46903664 - 46903632
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggt 86  Q
    |||||||||||||||||||||||||||||||||    
T  46903664 gtcctttaacttatttcttttattcaatttggt 46903632  T

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Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 5689862 - 5689933
Alignment:
Q  160 gagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||| |||| ||||| ||| ||||| ||||| |||| ||||||||||||||| | ||| |||||||||||||    
T  5689862 gagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacttaatttatttactttcttc 5689933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 21729423 - 21729380
Alignment:
Q  52 cggtcctttaacttatttcttttattcaatttggtcccataagt 95  Q
    |||||| |||| |||||||||||||||||||| |||||||||||    
T  21729423 cggtcccttaatttatttcttttattcaatttagtcccataagt 21729380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 2233345 - 2233311
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  2233345 gtcccttaacttatttcttttattcaatttggtcc 2233311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 28776577 - 28776671
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||  |||| |||| ||||| ||| ||||| ||||| ||||  ||||||| |||||||| ||| |||||||||||||  |||||||    
T  28776577 atcccctaaaaacagagaccgttggattacggaggtctatcagattttataatgtatcatcaacacctaatttatttactttcttcttcttcttc 28776671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 35758167 - 35758233
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttctctctc 246  Q
    ||||| ||||| |||  ||||||||||||||||| ||| |||||||||||||  ||||||| |||||    
T  35758167 gtctatcagattttacagtgtatcaccaacacctaatttatttactttcttcttcttcttccctctc 35758233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 37609450 - 37609544
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| |||| |||| ||||||||| |||||  |||| | || |||| ||| |||||||| ||| |||||||||||||  |||||||    
T  37609450 atcccctaaaaaaagagaccgttggattagggaggtctataagatttaatagtgtctcatcaacacctaatttatttactttcttcttcttcttc 37609544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 23073363 - 23073278
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| ||||  |||| ||| || || || || ||| |||||||||||||||||| ||| |||||||||||||    
T  23073363 atcccctaaaaaaagagaccgttgaattacggaggtgtatcaaattttacggtgtatcaccaacacctaatttatttactttcttc 23073278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 46902460 - 46902545
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||| | ||||| ||| ||||| ||| ||||| ||||| |||| ||||||||| ||||||  ||| |||||||||||||    
T  46902460 atcccctaaaagaagagattgttagattacggaggtctatcagattttatagtgtatcactaacaccaaatttatttactttcttc 46902545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 83
Target Start/End: Original strand, 53764506 - 53764535
Alignment:
Q  54 gtcctttaacttatttcttttattcaattt 83  Q
    ||||||||||||||||||||||||||||||    
T  53764506 gtcctttaacttatttcttttattcaattt 53764535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 17116280 - 17116312
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggt 86  Q
    |||| ||||||||||||||||||||||||||||    
T  17116280 gtcccttaacttatttcttttattcaatttggt 17116312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 35759186 - 35759126
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||| ||||| |||  ||||||||||||||||| ||| |||||||||||||  |||||||    
T  35759186 gtctatcagattttacagtgtatcaccaacacctaatttatttactttcttcttcttcttc 35759126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 44115427 - 44115487
Alignment:
Q  32 tttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccata 92  Q
    |||||||||||||||||  ||||||| |||||||| ||||||| || || |||||| ||||    
T  44115427 tttaggcttaattgatcctccggtcccttaacttaattcttttttttaaattggtctcata 44115487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 44116804 - 44116748
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccata 92  Q
    |||||||||||||  ||||||| |||||||| |||||||||| || |||||| ||||    
T  44116804 ggcttaattgatcctccggtcccttaacttaattcttttatttaaattggtcacata 44116748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 46902409 - 46902441
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggt 86  Q
    |||| ||||||||||||||||||||||||||||    
T  46902409 gtcccttaacttatttcttttattcaatttggt 46902441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 50879833 - 50879901
Alignment:
Q  163 atcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||||| ||||| ||| ||||| ||||| |||| ||||||||||||||||| |||  ||| ||||||||    
T  50879833 atcgttagattacggaggtctatcagattttatagtgtatcaccaacacctaatttgtttcctttcttc 50879901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 50881071 - 50881011
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    |||||||| || |||| ||||| ||||||||||| ||| ||||| |||||||| |||||||    
T  50881071 gtctaccatattttatagtgtaccaccaacacctaatttatttattttcttcatcttcttc 50881011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 27071019 - 27071215
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgt 134  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||| |||||||||||||||||||| || || |    
T  27071019 aggcttaattgatctgccggtcatttaacttatttcttttattcaatttggtcccataagttttaacagtcacaaacacatcccttaactcacctatcat 27071118  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttca 232  Q
    |||| ||||||||||||||||||||||||||||| ||| || || ||||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  27071119 taattaatgtgatcccctcaaaaaggagatcgttggataagagaggtctaccagatcttataatatatcaccaacacctgatt-atttaatttcttca 27071215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 27207294 - 27207098
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgt 134  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||| |||||||||||||||||||| || || |    
T  27207294 aggcttaattgatctgccggtcatttaacttatttcttttattcaatttggtcccataagttttaacagtcacaaacacatcccttaactcacctatcat 27207195  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttca 232  Q
    |||| ||||||||||||||||||||||||||||| ||| || || ||||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  27207194 taattaatgtgatcccctcaaaaaggagatcgttggataagagaggtctaccagatcttataatatatcaccaacacctgatt-atttaatttcttca 27207098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 26006862 - 26006666
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgt 134  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||  ||||| || |||||||||||||||||||| || ||||    
T  26006862 aggcttaattgatctgtcggtcccttaacttatttcttttgttcaatttggtcccataagttttaactatcacaaacacatcccttaactcacctatcgt 26006763  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttca 232  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||  ||||||||||||||| |||||| ||||||| |||||| ||||| ||||||||    
T  26006762 taattaatgtgatcccctcaaaaaggagatcgttggataagggagatctaccagatcttatagtgtattaccaacatctgatt-atttaatttcttca 26006666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 36 - 242
Target Start/End: Original strand, 45688867 - 45689071
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgtt 135  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||| | |||||    
T  45688867 ggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacatcccttaactcatttgtcgtt 45688966  T
Q  136 aatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcacct 235  Q
    ||||||  || |||||||||||  ||||||||| ||| |||||  |||| ||||||  || ||||||||||||||| | ||| ||||||||||||||  |    
T  45688967 aatcaacatggtcccctcaaaatagagatcgttggataagggagatctatcagatc--atagtgtatcaccaacacttaatttatttactttcttcatgt 45689064  T
Q  236 tcttctc 242  Q
    |||||||    
T  45689065 tcttctc 45689071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 42611433 - 42611626
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcg 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| || ||||||||  ||||||||||| | | |    
T  42611433 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggttccataagttttaactttctcaaacacactccttaactcatttgtag 42611532  T
Q  134 ttaatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttacttt 227  Q
    ||||||||  || ||| |||||||  ||||||||| ||||||| |  |||| |||||||||| |||||||| ||| || ||||| |||||||||    
T  42611533 ttaatcaacatggtcctctcaaaatagagatcgttggattaggaagatctatcagatcttatagtgtatcatcaatacttgatttatttacttt 42611626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 241
Target Start/End: Complemental strand, 44231960 - 44231755
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttc-gt 134  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||| | ||||||   ||||| |||||| ||| |  |    
T  44231960 ggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataaatcttaacttttgcaaacttgtccctcaactca-cttacttt 44231862  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcacc 234  Q
    |||||||| || ||||| | ||||| |||||||| ||| ||  | ||||||||||| |||| ||||||||||||||||||||| |||||||||||||  |    
T  44231861 taatcaatatggtccccacgaaaagaagatcgttggataagtaaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcttcctc 44231762  T
Q  235 ttcttct 241  Q
    |||||||    
T  44231761 ttcttct 44231755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 178
Target Start/End: Complemental strand, 7057446 - 7057306
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgtta 136  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||| |||||| || | | ||    
T  7057446 gcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaaccgtcacaaacacatccctcaactcacctatggcta 7057347  T
Q  137 atcaatgtgatcccctcaaaaaggagatcgttcgattaggga 178  Q
    || |||||||||||| | |||||||||||||| ||| |||||    
T  7057346 attaatgtgatccccac-aaaaggagatcgttggataaggga 7057306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 29188152 - 29188062
Alignment:
Q  32 tttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||    
T  29188152 tttaggcttaaatgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaa 29188062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 44417443 - 44417545
Alignment:
Q  22 gatattatgttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatccctta 121  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||  || ||||||| |||||||    
T  44417443 gatattatattttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaacattctcaaacacgtccctta 44417542  T
Q  122 act 124  Q
    |||    
T  44417543 act 44417545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 19217622 - 19217715
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||| ||||||    
T  19217622 ttttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccattaact 19217715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 29186661 - 29186752
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||| || ||||||| ||||||||||    
T  29186661 ttaggcttaattgatctgctggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaact 29186752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 44420642 - 44420552
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||||    
T  44420642 taggcttaattgatatgccgatcctttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaact 44420552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 3537429 - 3537514
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| || ||||||| ||||||||||    
T  3537429 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaact 3537514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 32519870 - 32519781
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||    
T  32519870 ttaggctaaattgatctgccggtcccttaatttatttcttttattcaatttggtcccataaatcttaactttctcaaacacatcccttaa 32519781  T

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Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 48792438 - 48792531
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| |  ||||||  ||||||||||    
T  48792438 ttttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttttcaaacatgtcccttaact 48792531  T

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Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 13750754 - 13750666
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||||| || ||||||| ||||||||||    
T  13750754 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttgatcacataagtcttaactttctcaaacacgtcccttaact 13750666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 43962691 - 43962599
Alignment:
Q  32 tttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || || || ||||||  ||||||||||    
T  43962691 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcacataagtcttagctttctcaaacatgtcccttaact 43962599  T

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Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 43113673 - 43113762
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||  ||||| || ||||||| ||||||||||    
T  43113673 aggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacacgtcccttaact 43113762  T

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Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 48793635 - 48793546
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| |  ||||||| ||||||||||    
T  48793635 aggcttaattgatttgccggtcccttaacttatttcttttattcattttggtcccataagtcttaactttttcaaacacgtcccttaact 48793546  T

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Target: chr7; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 37237343 - 37237255
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||| |||| |||| |||||||||||||| ||||||||| |||||||| ||||| || ||||||||||||||||||    
T  37237343 ggcttaattgatctgcccgtcccttaatttatttcttttatttaatttggtctcataagtcttaactctctcaaacacatcccttaact 37237255  T

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Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 3538686 - 3538604
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacac 113  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||    
T  3538686 tttttggcttaattgatccgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 3538604  T

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Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 13597143 - 13597232
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||| || ||||||| ||||| ||||    
T  13597143 aggcttaattgaactgccgatcctttaacgtatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtccctgaact 13597232  T

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Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 9391519 - 9391603
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatccctt 120  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||| | || ||||||| ||||||    
T  9391519 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtccctt 9391603  T

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Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 19008926 - 19008990
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagt 95  Q
    |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  19008926 ttttaggcttaattgatctgtcggtcccttaacttatttctttttttcaatttggtcccataagt 19008990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 27072772 - 27072684
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||| ||||||||||| ||||| || ||||||  ||||||||||    
T  27072772 ggcttaattgatctgtcggtcccttaatttatttcttttattcaatttgatcccataagtcttaactttctcaaacatgtcccttaact 27072684  T

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Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 27205541 - 27205629
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||| ||||||||||| ||||| || ||||||  ||||||||||    
T  27205541 ggcttaattgatctgtcggtcccttaatttatttcttttattcaatttgatcccataagtcttaactttctcaaacatgtcccttaact 27205629  T

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Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 9357781 - 9357692
Alignment:
Q  150 cctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttctt 239  Q
    ||||||||||||| ||||| ||  ||||| || ||||||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||    
T  9357781 cctcaaaaaggagctcgttggaaaagggaggtttaccagatcttatagtgtatcaccaacacctaatttatttactttcttcatcttctt 9357692  T

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Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 240
Target Start/End: Original strand, 45398545 - 45398746
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgttaat 138  Q
    |||||||||||| |||||| |||||||| ||||||  ||| |||||||||||||  || ||||| | ||||||    |||| |||| | ||   ||||||    
T  45398545 ttaattgatctgtcggtcccttaacttacttctttatttcgatttggtcccatagctcttaacttttgcaaactggcccctcaacttacctgatgttaat 45398644  T
Q  139 caatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttct 238  Q
     ||  || |||||| |||||||||||| || ||| ||||| || || || ||||||| |||||||||||||| || ||| |||||||||||||| |||||    
T  45398645 aaaaatggtcccctaaaaaaggagatcattggataagggaggtttatcaaatcttatagtgtatcaccaacatctaatttatttactttcttcatcttct 45398744  T
Q  239 tc 240  Q
    ||    
T  45398745 tc 45398746  T

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Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 43960940 - 43960996
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtc 87  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  43960940 ttttaggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtc 43960996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 18788681 - 18788590
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||| |||||| |||| || ||||| || ||||||  ||||||||||    
T  18788681 ttaggcttaattgatatgccggtcccttaatttatttcttttattcaatatggtcctataaatcttaactttctcaaacatgtcccttaact 18788590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 9392934 - 9392845
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| |||||  ||| ||||||| ||||| || ||||||  ||||||||||    
T  9392934 aggcttaattgatcttccgttcctttaacttatttcttttatttaatttattcctataagtcttaactttctcaaacatgtcccttaact 9392845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 19016817 - 19016756
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagt 95  Q
    ||||||||||||||||| |||||| |||| ||||||||||| ||||||||||||||||||||    
T  19016817 taggcttaattgatctgtcggtcccttaatttatttctttttttcaatttggtcccataagt 19016756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 26005412 - 26005461
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggt 86  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26005412 gcttaattgatctgccggtcccttaacttatttcttttattcaatttggt 26005461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 32518426 - 32518507
Alignment:
Q  41 aattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    |||||||||  |||||| |||| |||||||||||||||||||||||||||||| || ||||| || ||||||| ||||||||    
T  32518426 aattgatctatcggtcccttaatttatttcttttattcaatttggtcccataaatcttaactttctcaaacacgtcccttaa 32518507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 12630507 - 12630579
Alignment:
Q  40 taattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaaca 112  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||| |||||||| ||||| || ||||||    
T  12630507 taattgatatgtcggtcctttaacttatgtcttttattcaatttggtctcataagtcttaactttctcaaaca 12630579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 7011632 - 7011699
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataact 102  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||| || |||||||| |||||    
T  7011632 aggcttaattgatctgtcagtcccttaacttatttcttttattcaatttgatctcataagtcttaact 7011699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 7026990 - 7027057
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataact 102  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||| || |||||||| |||||    
T  7026990 aggcttaattgatctgtcagtcccttaacttatttcttttattcaatttgatctcataagtcttaact 7027057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 37235811 - 37235901
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||  |||||||||| ||||||||||||||||||| |||||||| |||||| ||  |||| || ||||| | ||||||||||    
T  37235811 taggcttaattggcctgccggtcccttaacttatttcttttatttaatttggttccataaatcccaactttctcaaacgcgtcccttaact 37235901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 44417586 - 44417681
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttct 241  Q
    ||||||| ||||| ||||| ||| ||||| ||| ||||| ||||| |||| || |||||||||||||| ||| |||||||||||||  ||||||||    
T  44417586 atcccctaaaaaaagagattgttggattacggaggtctatcagattttatagtctatcaccaacacctaatttatttactttcttcttcttcttct 44417681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 13597272 - 13597366
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    |||| || ||||| || |||||| ||||||||| |||||  |||| |||| ||||||||||||||||| ||| |||||||||||||  |||||||    
T  13597272 atcctctaaaaaaagatatcgttggattagggaggtctataagattttatagtgtatcaccaacacctaatttatttactttcttcttcttcttc 13597366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 37237209 - 37237131
Alignment:
Q  154 aaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttca 232  Q
    ||||| ||||||||| ||||| ||| ||||| ||||| |||| |||||| |||||||||| ||| ||||||||||||||    
T  37237209 aaaaaagagatcgttggattacggaggtctatcagattttatagtgtatgaccaacacctaatttatttactttcttca 37237131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 13599321 - 13599268
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttg 84  Q
    |||| ||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  13599321 tttttggcataattgatctgccaatcctttaacttatttcttttattcaatttg 13599268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 18787149 - 18787214
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataact 102  Q
    |||||||||||||| |||||| |||| ||||||||||| || ||||||||||||||| || |||||    
T  18787149 gcttaattgatctgtcggtcccttaatttatttcttttgtttaatttggtcccataaatcttaact 18787214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 44230426 - 44230515
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||| ||| |||  |||||||||||||||||||| || ||||||||  ||||| || ||| ||| ||| ||||||    
T  44230426 aggcttaattgatctgccgatcccttagattatttcttttattcaatttagttccataagttttaactttctcaatcacgtcctttaact 44230515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 45400125 - 45400040
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||| ||||||||||| |||  ||  |||||||| ||||| || ||||| | |||||||| ||||||||||    
T  45400125 ttaattgatctgccggtcccttaacttatttgtttattttgatttggtctcataactcttaacttttgcaaacacgtcccttaact 45400040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 7011782 - 7011861
Alignment:
Q  165 cgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttctctc 244  Q
    |||| ||||| ||| |||||  |||| |||| ||||||||||||||||| ||| ||||||||| |||| |||||||||||    
T  7011782 cgttggattacggaggtctataagattttatagtgtatcaccaacacctaatttatttactttattcatcttcttctctc 7011861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 7027140 - 7027219
Alignment:
Q  165 cgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttctctc 244  Q
    |||| ||||| ||| |||||  |||| |||| ||||||||||||||||| ||| ||||||||| |||| |||||||||||    
T  7027140 cgttggattacggaggtctataagattttatagtgtatcaccaacacctaatttatttactttattcatcttcttctctc 7027219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 18787277 - 18787371
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| |||||  ||| |||| ||||| ||| || || ||||| |||||||||||||||||||| | ||| |||||||||||||  |||||||    
T  18787277 atcccctaaaaaaatagaccgttggattacggaggtttatcagattttatggtgtatcaccaacacttaatttatttactttcttcttcttcttc 18787371  T

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Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 19217759 - 19217841
Alignment:
Q  149 ccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||| ||||| |||| |||| ||||| ||| ||||| | ||| |||| ||||||||||||||||| ||| |||||||||||||    
T  19217759 ccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacctaatttatttactttcttc 19217841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 44230505 - 44230539
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||||||||||||||||||||||||||||||||||    
T  44230505 gtcctttaacttatttcttttattcaatttggtcc 44230539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 45399999 - 45399905
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| |||| |||| ||||| | | ||||| ||||| |||| ||||||||| ||||||| ||| |||||||||||||  |||||||    
T  45399999 atcccctaaaaaaagagaccgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatttatttactttcttcttcttcttc 45399905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 44748552 - 44748467
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||||||  |||||||||  ||| ||||| | | ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||    
T  44748552 atcccctagaaaaggagactgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 44748467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 47536837 - 47536748
Alignment:
Q  151 ctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||||| ||| |||| ||| |  || ||||| ||||||| |||||||||||||||||||| |||   |||||||||||| |||||||    
T  47536837 ctcaaaaagaagaccgttggataaaagaggtctatcagatctaatggtgtatcaccaacacctaattatattactttcttcatcttcttc 47536748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 24653789 - 24653733
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccata 92  Q
    |||||||||||||  ||||||| |||||||| |||||||||| || |||||||||||    
T  24653789 ggcttaattgatcctccggtcccttaacttaattcttttatttaaattggtcccata 24653733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 44748621 - 44748569
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||||||| |||||||| |||| |||| |||||||||||||||||| ||||||    
T  44748621 ggcttaatcgatctgccagtcccttaatttatttcttttattcaatatggtcc 44748569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 8661668 - 8661715
Alignment:
Q  26 ttatgttttaggcttaattgatctgccggtcctttaacttatttcttt 73  Q
    |||| |||||||||||||||||| |||||||| |||||||| ||||||    
T  8661668 ttattttttaggcttaattgatcagccggtcccttaacttaattcttt 8661715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 22794306 - 22794219
Alignment:
Q  154 aaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttac-tttcttcaccttcttc 240  Q
    ||||||||||||||| ||| |  || ||||| ||||||| || |||||||||||||| |||||| |||| | |||||||| |||||||    
T  22794306 aaaaaggagatcgttggataaatgaggtctatcagatctaattgtgtatcaccaacatctgatttattttcttttcttcatcttcttc 22794219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 42612660 - 42612601
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattca-atttggtcccataa 93  Q
    ||||||||||||| ||| |||||||||| |||||||||||||| | | ||||||||||||    
T  42612660 aggcttaattgatatgcgggtcctttaatttatttcttttattaatacttggtcccataa 42612601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 9392855 - 9392821
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  9392855 gtcccttaacttatttcttttattcaatttggtcc 9392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 13750676 - 13750642
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  13750676 gtcccttaacttatttcttttattcaatttggtcc 13750642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 18787226 - 18787260
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  18787226 gtcccttaacttatttcttttattcaatttggtcc 18787260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 18788600 - 18788566
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  18788600 gtcccttaacttatttcttttattcaatttggtcc 18788566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 43113752 - 43113786
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  43113752 gtcccttaacttatttcttttattcaatttggtcc 43113786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 43113803 - 43113897
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| |||| |||| |||||  || ||||| ||||| |||| ||||||||||| ||||| ||| |||| ||||||||  |||||||    
T  43113803 atcccctaaaaaaagagaccgttggattacagaggtctatcagattttatagtgtatcaccagcacctaatttatttgctttcttcttcttcttc 43113897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 13749062 - 13749111
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttg 84  Q
    |||||||||||||||| ||||||  ||||||||||||| |||| ||||||    
T  13749062 aggcttaattgatctggcggtcccataacttatttcttatatttaatttg 13749111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 26005521 - 26005578
Alignment:
Q  187 agatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttctctc 244  Q
    |||| |||| ||||||||||||||| | ||| || ||||||||||| |||||||||||    
T  26005521 agattttatagtgtatcaccaacacgtaatttatgtactttcttcatcttcttctctc 26005578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 27072694 - 27072661
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtc 87  Q
    |||| |||||||||||||||||||||||||||||    
T  27072694 gtcccttaacttatttcttttattcaatttggtc 27072661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 27205619 - 27205652
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtc 87  Q
    |||| |||||||||||||||||||||||||||||    
T  27205619 gtcccttaacttatttcttttattcaatttggtc 27205652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 29186817 - 29186878
Alignment:
Q  170 gattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||| ||| ||||| ||||| |||| ||||||||||||||||| ||| ||||| |||||||    
T  29186817 gattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttattttcttc 29186878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 29188019 - 29187934
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| |||| ||||   || ||||| ||||| |||| ||| ||||||||||||| ||| |||||||||||||    
T  29188019 atcccctaaaaaaagagaccgttggattgcagaggtctatcagattttatagtgcatcaccaacacctaatttatttactttcttc 29187934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 44746729 - 44746774
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttg 84  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||||    
T  44746729 ttaattgatctgtcggtctcttaacttattttttttattcaatttg 44746774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 12630586 - 12630650
Alignment:
Q  59 ttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaac 123  Q
    ||||||||| |||||| |||||||||||| || ||||| ||| | || ||||||| |||||||||    
T  12630586 ttaacttatgtcttttcttcaatttggtctcaaaagtcttaattttctcaaacacgtcccttaac 12630650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 19217705 - 19217737
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggt 86  Q
    |||| ||||||||||||||||||||||||||||    
T  19217705 gtccattaacttatttcttttattcaatttggt 19217737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 27072602 - 27072546
Alignment:
Q  187 agatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttctct 243  Q
    |||| |||| || |||||||||||||| ||| ||||||||| |||| ||||||||||    
T  27072602 agattttatagtttatcaccaacacctaatttatttactttattcatcttcttctct 27072546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 27205711 - 27205767
Alignment:
Q  187 agatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttctct 243  Q
    |||| |||| || |||||||||||||| ||| ||||||||| |||| ||||||||||    
T  27205711 agattttatagtctatcaccaacacctaatttatttactttattcatcttcttctct 27205767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 43115144 - 43115097
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttg 84  Q
    |||||||||||| ||  ||||||| ||||||||||||||||||||||||    
T  43115144 ggcttaattgatgtgatggtcctt-aacttatttcttttattcaatttg 43115097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 44746809 - 44746837
Alignment:
Q  59 ttaacttatttcttttattcaatttggtc 87  Q
    |||||||||||||||||||||||||||||    
T  44746809 ttaacttatttcttttattcaatttggtc 44746837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 34 - 242
Target Start/End: Complemental strand, 3714640 - 3714432
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcg 133  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| ||    
T  3714640 taggcttaattgatctgccggttccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacatcccttaactcatcttccg 3714541  T
Q  134 ttaatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcac 233  Q
    ||||||||  || |||||||||||  ||||||||| ||| |||||  |||| |||||||||| ||||||||||||||| ||||| ||||||||||||||     
T  3714540 ttaatcaacatggtcccctcaaaatagagatcgttggataagggagatctatcagatcttatagtgtatcaccaacacttgatttatttactttcttcat 3714441  T
Q  234 cttcttctc 242  Q
     ||||||||    
T  3714440 gttcttctc 3714432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 22013359 - 22013153
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcg 133  Q
    ||||||||||||| |||| ||||| |||||||||||||||  |||| ||||||||||||| || ||||| | ||||||   ||||| |||||| ||| ||    
T  22013359 taggcttaattgaactgctggtcccttaacttatttctttatttcagtttggtcccataactcttaacttttgcaaactggtccctcaactca-cttacg 22013261  T
Q  134 ttaatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcac 233  Q
    ||||||||| || |||||||||||||||||||||| ||| || || ||||||||||| |||| ||||||||||||||||||||| |||||||||| ||      
T  22013260 ttaatcaatatggtcccctcaaaaaggagatcgttggataagtgaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcatctt 22013161  T
Q  234 cttcttct 241  Q
    ||||||||    
T  22013160 cttcttct 22013153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 241
Target Start/End: Original strand, 22012156 - 22012361
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgt 134  Q
    |||||||||||| ||| |||||| |||||||||||||||  |||| ||||||| ||||| || ||||| | ||||||   ||||| |||||| ||| |||    
T  22012156 aggcttaattgaactgtcggtcccttaacttatttctttatttcagtttggtctcataactcttaacttttgcaaactggtccctcaactca-cttacgt 22012254  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcacc 234  Q
    |||||||| || |||||||||||||||||||||| ||| || || ||||||||||| |||| ||||||||||||||||||||| |||||||||||||  |    
T  22012255 taatcaatatggtcccctcaaaaaggagatcgttggataagtgaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcttcttc 22012354  T
Q  235 ttcttct 241  Q
    |||||||    
T  22012355 ttcttct 22012361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 36 - 232
Target Start/End: Complemental strand, 43134167 - 43133971
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgtt 135  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| |  ||||| ||  |||||||||||||||||||||| | |||    
T  43134167 ggcttaattgatatgtcggtcctttaacttatttcttttattcaatttggtcctataacttttaactttcttaaacacatcccttaactcatctgttgtt 43134068  T
Q  136 aatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttca 232  Q
    |||||| ||| |||| ||||||  ||||| |||  || || || ||||||||||| |||| ||||||||||||||| ||||| ||||||||| ||||    
T  43134067 aatcaacgtggtcccatcaaaatagagattgttgaataagagaggtctaccagattttatagtgtatcaccaacacttgatttatttactttattca 43133971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 242
Target Start/End: Original strand, 3713063 - 3713267
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgtt 135  Q
    ||||||||||||||| |||||  |||| |||||||||||||| |||||||| | ||||||  ||||| || ||||||||||||||||||||| | |||||    
T  3713063 ggcttaattgatctgtcggtctcttaa-ttatttcttttatttaatttggttc-ataagttttaactttctcaaacacatcccttaactcatatgtcgtt 3713160  T
Q  136 aatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcacct 235  Q
    | |||| ||| |||||||||||  ||||||||| ||| |||||  ||||  ||||||||| ||||||||| ||||| ||||| ||||||||||||||  |    
T  3713161 actcaacgtggtcccctcaaaatagagatcgttggataagggagatctattagatcttatagtgtatcacaaacacttgatttatttactttcttcatgt 3713260  T
Q  236 tcttctc 242  Q
    |||||||    
T  3713261 tcttctc 3713267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 9244060 - 9244153
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||| || ||||||| ||||||||||    
T  9244060 ttttaggcttaattgatctgctggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaact 9244153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 26364741 - 26364829
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||| ||||||    
T  26364741 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcctttaact 26364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 9245552 - 9245463
Alignment:
Q  34 taggcttaattgatctgccggtccttt-aacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||    
T  9245552 taggcttaaatgatctgccggtccttttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaa 9245463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 43584404 - 43584496
Alignment:
Q  32 tttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |||||||| ||||| || ||||||| ||||||||||    
T  43584404 tttaggcttaattgatctgtcggtccattaacttatttcttttattcaatttgatctcataagtcttaactttctcaaacacgtcccttaact 43584496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 20308921 - 20309009
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||  ||||| || ||||||| ||||||||    
T  20308921 taggcttaattgatctgccggtcccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaa 20309009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 21095554 - 21095642
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||  ||||| || ||||||| ||||||||    
T  21095554 taggcttaattgatctgccggtcccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaa 21095642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 41636830 - 41636917
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||| ||||| ||  |||||| ||||||||    
T  41636830 aggcttaattgatttgccggtccttttacttatttctttcattcaatttggtcccataagtcttaactttctaaaacacgtcccttaa 41636917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 34642667 - 34642753
Alignment:
Q  38 cttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||| ||||| || ||||||| ||||||||||    
T  34642667 cttaattgatctgccggtctcttaacttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaact 34642753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 30640801 - 30640857
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagt 95  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30640801 ttaattgatatgccggtcctttaacttatttcttttattcaatttggtcccataagt 30640857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 522214 - 522127
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||||| ||||| || ||||||  ||||||||||    
T  522214 gcttaattaatctgtcggtcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacatgtcccttaact 522127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 41638270 - 41638194
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaaca 112  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||  || |||||||| ||||| || ||||||    
T  41638270 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttattctcataagtcttaactttctcaaaca 41638194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 26366312 - 26366247
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||| ||||    
T  26366312 ggcttaattgatctgccgatcctttaacttatttcttttatttaatttggtttcataagtcttaac 26366247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 41636960 - 41637045
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||    
T  41636960 atcccctaaaaaaagagaccgttggattacggaagtctatcagattttatcgtgtatcaccaacacctaatttatttactttcttc 41637045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 20310170 - 20310082
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||| ||||||  |||| ||||||||||||||||||||| ||||||| |||||||| ||| | || ||||||| ||||||||||    
T  20310170 ggcttaattaatctgctcgtcccttaacttatttcttttattcattttggtctcataagtcttaagtttctcaaacacgtcccttaact 20310082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 21096803 - 21096715
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||| ||||||  |||| ||||||||||||||||||||| ||||||| |||||||| ||| | || ||||||| ||||||||||    
T  21096803 ggcttaattaatctgctcgtcccttaacttatttcttttattcattttggtctcataagtcttaagtttctcaaacacgtcccttaact 21096715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 30644819 - 30644734
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||| |||| | |||| |||||||||||||| ||||||||||||||| || ||||| || ||||||| || |||||||    
T  30644819 ttaattgatctgtcggttccttaatttatttcttttatttaatttggtcccataaatcttaactttctcaaacacgtctcttaact 30644734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 31202966 - 31203054
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||| ||||| || | | ||||||||||||||||||||| ||||||||||||| || ||| | || ||||||| ||||||||||    
T  31202966 ggcttaattaatctgtcgtttccttaacttatttcttttattcattttggtcccataaatcttaagtttctcaaacacgtcccttaact 31203054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 30640926 - 30641020
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||| || || |||| ||||||||||||||||| ||| |||||||||||||  |||||||    
T  30640926 atcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacctaatttatttactttcttcttcttcttc 30641020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 43586059 - 43586002
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtc 96  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||| || ||||||||    
T  43586059 ttaattgatctgtcggtcccttaacttatttcttttatttaatttgatctcataagtc 43586002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 34644076 - 34644001
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacac 113  Q
    |||||||||||| | |||||| || |||||||||||||||||||||| ||||||||| || ||||| || |||||||    
T  34644076 gcttaattgatccgtcggtcccttgacttatttcttttattcaattt-gtcccataaatcttaactttctcaaacac 34644001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 41638192 - 41638158
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||||||||||||||||||||||||||||||||||    
T  41638192 gtcctttaacttatttcttttattcaatttggtcc 41638158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 9245420 - 9245335
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| |||| ||||   || ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||    
T  9245420 atcccctaaaaaaagagaccgttggattgctgaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 9245335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 26366183 - 26366089
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| |||||  ||| |||| ||||| ||| |||||  |||| |||| ||||||||||||||| | ||| |||||||||||||  |||||||    
T  26366183 atcccctaaaaaaaaagaccgttagattacggaggtctattagattttatagtgtatcaccaacacataatttatttactttcttcttcttcttc 26366089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 9244218 - 9244279
Alignment:
Q  170 gattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||| ||| ||||| ||||| |||| ||||||||||||||||| ||| ||||| |||||||    
T  9244218 gattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttattttcttc 9244279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 84
Target Start/End: Original strand, 26364820 - 26364849
Alignment:
Q  55 tcctttaacttatttcttttattcaatttg 84  Q
    ||||||||||||||||||||||||||||||    
T  26364820 tcctttaacttatttcttttattcaatttg 26364849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 20309086 - 20309146
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||| ||||| |||| |||||||||||| |||| ||| |||||||||||||  |||||||    
T  20309086 gtctatcagattttatagtgtatcaccaatacctaatttatttactttcttcttcttcttc 20309146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 21095719 - 21095779
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||| ||||| |||| |||||||||||| |||| ||| |||||||||||||  |||||||    
T  21095719 gtctatcagattttatagtgtatcaccaatacctaatttatttactttcttcttcttcttc 21095779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 26366228 - 26366200
Alignment:
Q  60 taacttatttcttttattcaatttggtcc 88  Q
    |||||||||||||||||||||||||||||    
T  26366228 taacttatttcttttattcaatttggtcc 26366200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 34642743 - 34642775
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggt 86  Q
    |||| ||||||||||||||||||||||||||||    
T  34642743 gtcccttaacttatttcttttattcaatttggt 34642775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 38665989 - 38665941
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattca 79  Q
    |||| |||||||||||||  |||||||||||||||| ||||||| ||||    
T  38665989 tttttggcttaattgatcacccggtcctttaacttaattcttttgttca 38665941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 6e-58; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 34122923 - 34122714
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttc 132  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||||| | ||    
T  34122923 ttaggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacatcccttaactcatttgtc 34122824  T
Q  133 gttaatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttca 232  Q
     |||||||| ||| |||||||||||  |||| |||| ||| |||||  |||| |||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  34122823 attaatcaacgtggtcccctcaaaatagagaacgttggataagggagatctatcagatcttatagtgtatcaccaacacttgatttatttactttcttca 34122724  T
Q  233 ccttcttctc 242  Q
      ||||||||    
T  34122723 tgttcttctc 34122714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 34 - 242
Target Start/End: Complemental strand, 48463104 - 48462896
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcg 133  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||  ||||| || ||||||||||||||||||||| |   |    
T  48463104 taggcttaattgatctgctggtcccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacacatcccttaactcatatgcag 48463005  T
Q  134 ttaatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcac 233  Q
    ||||||||  || ||| |||||||  ||||||||| |||||||||  |||| ||||||||||  ||||||| |||||| ||||| ||||||||||||||     
T  48463004 ttaatcaacatggtcctctcaaaatagagatcgttggattagggagatctatcagatcttatactgtatcatcaacacatgatttatttactttcttcat 48462905  T
Q  234 cttcttctc 242  Q
     ||||||||    
T  48462904 gttcttctc 48462896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 240
Target Start/End: Original strand, 34121298 - 34121503
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgt 134  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| ||||| || |||||||||| |||||||| |||    |    
T  34121298 aggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcacttaactcgtctgctat 34121397  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcacc 234  Q
    |||| || ||| |||||||||||    ||||||| ||| |||||  |||| |||| ||||  ||||||||||||||  ||||| |||||| ||||||| |    
T  34121398 taattaacgtggtcccctcaaaataatgatcgttggatgagggagatctatcagagcttacagtgtatcaccaacatttgatttatttacattcttcatc 34121497  T
Q  235 ttcttc 240  Q
    ||||||    
T  34121498 ttcttc 34121503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 38031163 - 38031256
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||| || ||||||| ||||||||||    
T  38031163 ttttaggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaact 38031256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 7261663 - 7261573
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||| ||||||||||    
T  7261663 taggcttaattgatctaccggtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaact 7261573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 8815476 - 8815387
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||||    
T  8815476 aggcttaattgatttgccggtccgttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaact 8815387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 17357978 - 17357893
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| || ||||||| ||||||||||    
T  17357978 ttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcccttaact 17357893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 22621864 - 22621951
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatccctt 120  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||    
T  22621864 ttaggcttaattgatctgccagtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctt 22621951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 10802889 - 10802977
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |  ||||| || ||||||| ||||||||||    
T  10802889 ggcttaattgatctgccgatcccttaacttatttcttttattcaatttggtcccataaattttaactttctcaaacacgtcccttaact 10802977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 38032538 - 38032450
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||  ||||||| ||||| || ||||||| ||||||||||    
T  38032538 ggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaact 38032450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 10804315 - 10804254
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagt 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  10804315 taggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataagt 10804254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 23758088 - 23758001
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||||||  ||||| || ||||||| ||||||||||    
T  23758088 gcttaattgatctgccggttctttaatttatttcttttattcaatttagtctcataagttttaactttctcaaacacgtcccttaact 23758001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 243
Target Start/End: Original strand, 48462140 - 48462348
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattca-atttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttc 132  Q
    |||| ||||||||| ||| |||| ||||| |||||||||||||| | |||||| | |||||||  ||||| |  |||||||||| ||||| |||| |  |    
T  48462140 tagggttaattgatatgctggtcttttaatttatttcttttattaatatttggactcataagttttaactttttcaaacacatctcttaattcatgt--c 48462237  T
Q  133 gttaatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttca 232  Q
    ||||||||| ||| |||| ||||||  |||||| || ||| |||||  |||| || ||||||| ||||||||||||||  ||||| |||||||||| |||    
T  48462238 gttaatcaacgtggtcccttcaaaatagagatcattggataagggagatctatcatatcttatagtgtatcaccaacatttgatttatttactttcatca 48462337  T
Q  233 ccttcttctct 243  Q
      |||||||||    
T  48462338 tgttcttctct 48462348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 17356360 - 17356449
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||| | ||| || || ||||| || ||||||| ||||||||||    
T  17356360 aggcttaattgatctgtcggtcccttaacttatttcttttattcaatttgatgccagaaatcttaactttctcaaacacgtcccttaact 17356449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 18091579 - 18091673
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatct 129  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||  |||||||| ||||| || |||| || ||| |||||| ||||    
T  18091579 aggcttaattgatctgccgatcccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatct 18091673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 8814130 - 8814223
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||| ||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||| || || || || ||||||  ||||||||||    
T  8814130 ttttcggcttaattgatctatcggtcccttaacttatttcttttattcaatttagtcccataaatcttatctttctcaaacatgtcccttaact 8814223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 34095778 - 34095689
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||    |||| ||||||||||| ||||||||||||||||| |||||||| ||||| || ||||||| ||||||||||    
T  34095778 aggcttaattgatctattagtcccttaacttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaact 34095689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 35191817 - 35191894
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacac 113  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||||||  |||||||| ||||| || |||||||    
T  35191817 ggcttaattgattcgccggtcccttaacttatttcttttattcaatttggtttcataagtcttaactttctcaaacac 35191894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 48081630 - 48081562
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||    
T  48081630 gtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaa 48081562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 56233724 - 56233812
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||| |||||  |||||| ||||||||||||||||||||||||||||| ||||||||  |||| || ||||||  ||||||||||    
T  56233724 ggcttaatagatctatcggtcccttaacttatttcttttattcaatttggtcgcataagtctcaactttctcaaacatgtcccttaact 56233812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 56235138 - 56235050
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||| | |||| |||| ||||||||||||||||||||| || |||||||| ||||| |  |||||||| |||||||||    
T  56235138 ggcttaattgatctgtcagtcccttaatttatttcttttattcaatttgatctcataagtcttaactttatcaaacacaccccttaact 56235050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 48080267 - 48080345
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaac 111  Q
    |||||||||||||||||| |||||  ||||||||||||||||||| ||||||||  |||||||| ||||| || |||||    
T  48080267 ttaggcttaattgatctgtcggtcacttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaac 48080345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 48081450 - 48081392
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtccc 89  Q
    |||||| |||||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  48081450 ttttagccttaattgatttgccggtcccttaacttattccttttattcaatttggtccc 48081392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 48499367 - 48499452
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||   | ||||||||||||||||||||||||||||||||||| || ||||| |  ||||||  ||||||||||    
T  48499367 ttaattgatctgccgccaccttaacttatttcttttattcaatttggtcccataattcttaactttttcaaacatgtcccttaact 48499452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 23757951 - 23757864
Alignment:
Q  154 aaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttct 241  Q
    ||||| |||| ||||  |||| ||| ||||| ||||| |||||||||||||||||||||| ||| |||||||||||||  ||||||||    
T  23757951 aaaaaagagaccgttgaattacggaggtctatcagattttatggtgtatcaccaacacctaatttatttactttcttcttcttcttct 23757864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 48081705 - 48081642
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataact 102  Q
    ||||||||| || |||||| |||||||||| ||||||||||||||||| ||||||||| |||||    
T  48081705 ttaattgatgtgtcggtcccttaacttattccttttattcaatttggttccataagtcttaact 48081642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 17356490 - 17356584
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||| ||||| |||| |||||||||||||||||  || |||||||||||||  |||||||    
T  17356490 atcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctagttcatttactttcttcttcttcttc 17356584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 34095648 - 34095554
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| |||||||||| ||||  |||| ||| ||||| ||||| |||| |||||||||| |||||| ||| |||||||||||||  |||||||    
T  34095648 atcccctaaaaaaggagaccgttgaattacggaggtctatcagattttatagtgtatcacccacacctaatttatttactttcttcttcttcttc 34095554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 35193312 - 35193226
Alignment:
Q  38 cttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||| ||||| |||| |||| |||||||||||||||||||||||| |||||  | ||||| || ||||||| ||| ||||||    
T  35193312 cttaattgacctgccagtcccttaatttatttcttttattcaatttggtctcataaaacttaactttctcaaacacgtcctttaact 35193226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 35927090 - 35927020
Alignment:
Q  161 agatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||||||| ||||| | | ||||||||||| |||| ||||||||||||||||| ||| |||||||||||||    
T  35927090 agatcgttggattacgaaggtctaccagattttatagtgtatcaccaacacctaatttatttactttcttc 35927020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 38032409 - 38032315
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||| ||||| |||| |||||||| |||||||| ||| |||||||||||||  |||||||    
T  38032409 atcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttcttcttcttc 38032315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 48501437 - 48501365
Alignment:
Q  40 taattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaaca 112  Q
    ||||||||||| |||| |||||||||||||||||||||||||| |||  ||||| || ||||| || ||||||    
T  48501437 taattgatctgtcggttctttaacttatttcttttattcaattaggtttcataattcttaactttctcaaaca 48501365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 5433504 - 5433449
Alignment:
Q  57 ctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaaca 112  Q
    |||||||||||||||||||||||||||||||| ||||||  ||||| || ||||||    
T  5433504 ctttaacttatttcttttattcaatttggtcctataagttttaactttctcaaaca 5433449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 22624428 - 22624389
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttctttta 75  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  22624428 ggcttaattgatctgccggtcccttaacttatttctttta 22624389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 5470272 - 5470214
Alignment:
Q  32 tttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtccca 90  Q
    ||||||||||||||| |||||| ||| |||||||| ||| ||||||||| |||||||||    
T  5470272 tttaggcttaattgaactgccgatcccttaacttaattcatttattcaagttggtccca 5470214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 35193236 - 35193202
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||||||||||||||||||||||||||||||||||    
T  35193236 gtcctttaacttatttcttttattcaatttggtcc 35193202  T

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Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 22621996 - 22622081
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||| ||||| |||| |||||||||| |||||  ||| |||||||||||||    
T  22621996 atcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccgacaccgaatttatttactttcttc 22622081  T

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Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 22623230 - 22623177
Alignment:
Q  67 tttcttttattcaatttggtcccataagtcataactgtcgcaaacacatccctt 120  Q
    |||||||||||||||||||||||||||||| ||||| || ||| ||| ||||||    
T  22623230 tttcttttattcaatttggtcccataagtcttaactttctcaagcacgtccctt 22623177  T

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Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 48501313 - 48501228
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||  ||||| |||| |||||||| |||||||| ||| |||||||||||||    
T  48501313 atcccctaaaaaaagagaccgttagattacggaggtctgtcagattttattgtgtatcatcaacacctaatttatttactttcttc 48501228  T

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Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 48501363 - 48501330
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtc 87  Q
    ||||||||||||||||||||||||||||||||||    
T  48501363 gtcctttaacttatttcttttattcaatttggtc 48501330  T

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Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 8815327 - 8815251
Alignment:
Q  165 cgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttct 241  Q
    |||| ||||| ||| ||||| ||||| |||| ||||||||||||||||  ||| |||||||||||||  ||||||||    
T  8815327 cgttggattacggaggtctatcagattttatagtgtatcaccaacaccaaatttatttactttcttcttcttcttct 8815251  T

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Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 18091743 - 18091803
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||  |||||||    
T  18091743 gtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttcttc 18091803  T

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Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 10804165 - 10804086
Alignment:
Q  165 cgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttctctc 244  Q
    |||| ||||| ||| ||||| ||||| |||  |||||||| |||| ||| ||| |||||||||||||| |||||||||||    
T  10804165 cgttggattacggaggtctatcagattttacagtgtatcatcaacgcctaatttatttactttcttcatcttcttctctc 10804086  T

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Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 23756604 - 23756662
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtccca 90  Q
    |||| ||||||||||| |||||| ||||| |||||| ||||||||||||| |||||||||    
T  23756604 ttttgggcttaattgaactgccgatcctt-aacttaattcttttattcaagttggtccca 23756662  T

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Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 7261491 - 7261437
Alignment:
Q  187 agatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttct 241  Q
    |||| |||| ||||||||||||||||| ||| |||||||||||||  ||||||||    
T  7261491 agattttatagtgtatcaccaacacctaatttatttactttcttcttcttcttct 7261437  T

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Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 7261583 - 7261549
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  7261583 gtcccttaacttatttcttttattcaatttggtcc 7261549  T

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Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 10802967 - 10803001
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  10802967 gtcccttaacttatttcttttattcaatttggtcc 10803001  T

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Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 48499493 - 48499586
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| ||||||||| |||||  || ||||| ||||| ||| ||||||||||||||| || |||  |||||||| |||| |||||||    
T  48499493 atcccctaaaaaaagagatcgttggattacagaggtctatcagattttacggtgtatcaccaacatctaatt-ttttactttattcatcttcttc 48499586  T

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Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 56233802 - 56233836
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  56233802 gtcccttaacttatttcttttattcaatttggtcc 56233836  T

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Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 8814213 - 8814246
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtc 87  Q
    |||| |||||||||||||||||||||||||||||    
T  8814213 gtcccttaacttatttcttttattcaatttggtc 8814246  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 5574200 - 5574256
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccata 92  Q
    |||||||||||||  ||||||| |||||||| |||||||||| || ||||| |||||    
T  5574200 ggcttaattgatcctccggtcccttaacttaattcttttatttaaattggtaccata 5574256  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 38031322 - 38031382
Alignment:
Q  171 attagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||| ||| ||||| ||||| |||| |||||||| |||||||| ||| |||||||||||||    
T  38031322 attacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttc 38031382  T

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Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 82
Target Start/End: Original strand, 48080348 - 48080376
Alignment:
Q  54 gtcctttaacttatttcttttattcaatt 82  Q
    |||||||||||||||||||||||||||||    
T  48080348 gtcctttaacttatttcttttattcaatt 48080376  T

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Target: chr6 (Bit Score: 97; Significance: 9e-48; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 36 - 231
Target Start/End: Original strand, 29477759 - 29477954
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttc-gt 134  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||| | ||||||   ||||| |||||| ||| |  |    
T  29477759 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataaatcttaacttttgcaaactggtccctcaactca-cttacttt 29477857  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||||||| || ||||||||||||| |||||||| ||| || || ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  29477858 taatcaatatggtcccctcaaaaagaagatcgttggataagtgaggtctaccagattttatggtgtatcaccaacacctgatttatttactttcttc 29477954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 240
Target Start/End: Complemental strand, 18574411 - 18574208
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgtt 135  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||| || ||| ||| ||||| |||| || ||   ||    
T  18574411 ggcttaattgatctgccggtcccttgacttatttcttttattcaatttggttccataagtcttaactttctcaagcacgtccctgaacttat-ttctttt 18574313  T
Q  136 aatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcacct 235  Q
    | ||||| || ||||||||| |||||||||||  ||| || || ||||| ||||| |||| ||||| |||||||||| |||| |||||||||||||  ||    
T  18574312 attcaatttggtcccctcaagaaggagatcgtcggataagtgaggtctatcagattttatagtgtaccaccaacaccggatttatttactttcttcttct 18574213  T
Q  236 tcttc 240  Q
    |||||    
T  18574212 tcttc 18574208  T

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Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 11801462 - 11801372
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||| || ||||||| ||||||||||    
T  11801462 taggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaact 11801372  T

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Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 18572884 - 18572973
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||  ||| || ||||||||||    
T  18572884 aggcttaattgatctgccggtccgttaacttatttcttttattcaatttggtcccataagtcttaactttcttaaaaacgtcccttaact 18572973  T

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Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 32349156 - 32349067
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||  ||||||| ||||| || ||||||| ||||||||||    
T  32349156 aggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcttataagtcttaactttctcaaacacgtcccttaact 32349067  T

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Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 34995352 - 34995429
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacac 113  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||    
T  34995352 ggcttaattgatctgtcggtcctttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 34995429  T

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Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 3000911 - 3000823
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| || ||||| || ||||||| ||||||||||    
T  3000911 ggcttaattgatttgtcggtcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacctcccttaact 3000823  T

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Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 32714002 - 32713913
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| |||||| |||||| || ||||| || ||||||| ||||||||||    
T  32714002 aggcttaattgatctgctggtcctgtaacttatttcttttattcagtttggttccataaatcttaactttctcaaacacgtcccttaact 32713913  T

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Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 32347806 - 32347894
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||  ||||||| ||||| || ||||||| ||||||||    
T  32347806 taggcttaattgatctgctggttccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaa 32347894  T

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Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 34996883 - 34996791
Alignment:
Q  32 tttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||| |||||||||| || |||||| | ||||||||||||||||||||||| |||||||||||| ||||| || |||| || ||||||||||    
T  34996883 tttagacttaattgatttgtcggtccctgaacttatttcttttattcaatttagtcccataagtcttaactttctcaaatacgtcccttaact 34996791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 29479313 - 29479224
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||||| |||||||||||||  ||||| || ||| ||| ||| ||||||    
T  29479313 aggcttaattgatctgccgatcccttaaattatttcttttattcaatctggtcccataagttttaactttctcaatcacgtcctttaact 29479224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 32712350 - 32712412
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataa 93  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||||| |||||||| ||||    
T  32712350 ttttaggtttaattgatctgtcggtcccttaacttatttcttttattcagtttggtcctataa 32712412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 21094534 - 21094628
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| |||| |||| ||||| ||| |||||| |||| |||| ||||||||||||||||| ||| ||||||||| || | |||||||    
T  21094534 atcccctaaaaaaagagaccgttggattacggaggtctactagattttatagtgtatcaccaacacctaatttatttactttattaatcttcttc 21094628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 21095360 - 21095287
Alignment:
Q  154 aaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttacttt 227  Q
    ||||| ||||| ||| ||||| ||| ||||||||||| |||| ||||||||||||||||| ||| |||||||||    
T  21095360 aaaaaagagattgttggattacggaggtctaccagattttatagtgtatcaccaacacctaatttatttacttt 21095287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 32349026 - 32348941
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||| ||||| |||| |||||||| |||||||| ||| |||||||||||||    
T  32349026 atcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttc 32348941  T

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Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 19383262 - 19383219
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatt 82  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  19383262 ttaattgatccgccggtcccttaacttatttcttttattcaatt 19383219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 29479234 - 29479200
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||||||||||||||||||||||||||||||||||    
T  29479234 gtcctttaacttatttcttttattcaatttggtcc 29479200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 32347937 - 32348031
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| |||| |||| ||||| ||  ||||| ||||| |||| |||||||| |||||||| ||| |||||||||||||  |||||||    
T  32347937 atcccctaaaaaaagagaacgttggattacgggggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttcttcttcttc 32348031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 11801331 - 11801247
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttctt 230  Q
    ||||||||||||| |||| |||| ||||| ||| ||||| || || |||| ||||||||  ||||||| ||| ||||||||||||    
T  11801331 atcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcattaacacctaatttatttactttctt 11801247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 19788248 - 19788347
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgtta 136  Q
    |||||||| ||||| || ||| ||||||| |||||||||||||||||| || |||||||  ||||| ||  |||||| ||  ||||||||| | ||||||    
T  19788248 gcttaattcatctgtcgatcccttaacttgtttcttttattcaatttgatctcataagttttaactttcataaacacgtctattaactcatatgtcgtta 19788347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 88
Target Start/End: Original strand, 34995432 - 34995463
Alignment:
Q  57 ctttaacttatttcttttattcaatttggtcc 88  Q
    ||||||||||||||||||||||||||||||||    
T  34995432 ctttaacttatttcttttattcaatttggtcc 34995463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 34996716 - 34996665
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||    
T  34996716 gtctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 34996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 3000767 - 3000697
Alignment:
Q  161 agatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||||||| ||||| | | ||||| ||||| |||| ||||||||| ||||||| ||| |||||||||||||    
T  3000767 agatcgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatttatttactttcttc 3000697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 32713923 - 32713889
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  32713923 gtcccttaacttatttcttttattcaatttggtcc 32713889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 34995480 - 34995574
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| |||||  ||| |||| ||||| | | ||||| ||||| |||| |||||||||||||| || ||| |||||||||||||  |||||||    
T  34995480 atcccctaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacatctaatttatttactttcttcttcttcttc 34995574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 34996801 - 34996767
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  34996801 gtcccttaacttatttcttttattcaatttggtcc 34996767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 19761941 - 19761990
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttg 84  Q
    |||||||||| ||||| || ||| ||||||| ||||||||||||||||||    
T  19761941 aggcttaattcatctgtcgatcccttaacttgtttcttttattcaatttg 19761990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 27719734 - 27719779
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaa 80  Q
    |||||||||||| || |||||||||||||||| ||||||| |||||    
T  27719734 aggcttaattgaactcccggtcctttaacttaattcttttcttcaa 27719779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 27719872 - 27719941
Alignment:
Q  154 aaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgattta 223  Q
    ||||| |||| |||| ||||| ||| ||||| ||||| |||| ||||||||||||||||| ||| |||||    
T  27719872 aaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttattta 27719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 32712438 - 32712467
Alignment:
Q  59 ttaacttatttcttttattcaatttggtcc 88  Q
    ||||||||||||||||||||||||||||||    
T  32712438 ttaacttatttcttttattcaatttggtcc 32712467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 32712484 - 32712569
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||| || || |||| ||||| ||||||||||| | | |||||||||||||    
T  32712484 atcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtaccaccaacacctaacttatttactttcttc 32712569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 32713872 - 32713787
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| | || |||| ||||| ||| |||||  |||| |||  ||||||||||||||||| ||| |||||||||||||    
T  32713872 atcccctaaaaaaagtgaccgttggattacggaggtctataagattttacagtgtatcaccaacacctaatttatttactttcttc 32713787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 240
Target Start/End: Original strand, 5033478 - 5033682
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgtt 135  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||||||||| |||| |  ||||| || |||| |||||||||||||||||| | |||    
T  5033478 ggcttaatagatctgtcagtcctttaacttatttcttttattcaatttggtcctataacttttaactttctcaaatacatcccttaactcatctgttgtt 5033577  T
Q  136 aatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcacct 235  Q
    |||||| ||| |||||||||||  ||||||||| ||| || ||  |||||||||| |||| ||||||||||||||  | ||| |||||||||||||| ||    
T  5033578 aatcaacgtggtcccctcaaaatagagatcgttggataagagagatctaccagattttatagtgtatcaccaacatttaatttatttactttcttcatct 5033677  T
Q  236 tcttc 240  Q
    |||||    
T  5033678 tcttc 5033682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 5034935 - 5034738
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgt 134  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||| | |||| |  ||||| || |||||||||||||||||||| || | ||    
T  5034935 aggcttaattgatttgccggtcctttaacttatttcttttatttaatttggttctataacttttaactttctcaaacacatcccttaactcacctgttgt 5034836  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttca 232  Q
    ||||||| ||| |||| ||||||  ||||||||| ||| || || ||||| ||||| |||  ||||||||||||||| ||||| ||||||||| ||||    
T  5034835 taatcaacgtggtcccatcaaaatagagatcgttggataagagaggtctaacagattttagagtgtatcaccaacacttgatttatttactttgttca 5034738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 16604308 - 16604104
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgt 134  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| | || ||| ||| ||||| |||| || ||   |    
T  16604308 aggcttaattgatctaccggtcccttaacttatttcttttattcaatttggtcccataagtcttaagtttctcaagcacgtccctgaacttat-ttcttt 16604210  T
Q  135 taatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcacc 234  Q
    || ||||| || ||||||||| |||||||||||  ||| || || ||||||||||| |||| ||||| |||||||||  |||| |||||||||||||  |    
T  16604209 tattcaatttggtcccctcaagaaggagatcgtcggataagtgaggtctaccagattttatagtgtaccaccaacactggatttatttactttcttcttc 16604110  T
Q  235 ttcttc 240  Q
    ||||||    
T  16604109 ttcttc 16604104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 23833991 - 23833900
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||| ||||||||||    
T  23833991 ttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaact 23833900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 27892457 - 27892366
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| || || |||| ||||||||||    
T  27892457 ttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcagacacgtcccttaact 27892366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 27891104 - 27891194
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||| || ||||||| ||||||||||    
T  27891104 taggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataggtcttaactttctcaaacacgtcccttaact 27891194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 16602725 - 16602813
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||    
T  16602725 ggcttaattgatctgtcggtcccttaatttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaact 16602813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 142
Target Start/End: Complemental strand, 19577443 - 19577338
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttcgtta 136  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| || ||||| |  |||| |||||||||| ||||||| ||||||    
T  19577443 gcttaattgatctcccggtcccttaacttatttcttttagtcaatttggtcccataactcttaactttaacaaagacatcccttatctcatctatcgtta 19577344  T
Q  137 atcaat 142  Q
     |||||    
T  19577343 gtcaat 19577338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 38244074 - 38243985
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||| |||||| |||| |||||||||||||||| |||||||||||||||| ||||| |  ||||||| ||||||||||    
T  38244074 aggcttaattgatctgtcggtcccttaatttatttcttttattcattttggtcccataagtcttaactttttcaaacacgtcccttaact 38243985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 23832968 - 23833045
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacac 113  Q
    |||||||||||| || |||||| ||||||||||| |||||||| ||||||||||||||||| ||||| || |||||||    
T  23832968 ggcttaattgatttgtcggtcccttaacttatttattttattccatttggtcccataagtcttaactttctcaaacac 23833045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 43814521 - 43814609
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||| || |||||| ||||||||||||||||||||||||| ||| |||||||| ||||| || |||| || ||| ||||||    
T  43814521 ggcttaattgatttgtcggtcccttaacttatttcttttattcaatttcgtctcataagtcttaactttctcaaatacgtcctttaact 43814609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 26388220 - 26388306
Alignment:
Q  38 cttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||| |||||  ||||||||||| |||||||||||||| || |||||||| ||||| || ||||||| ||| ||||||    
T  26388220 cttaattgatctgtcggtctcttaacttattttttttattcaatttgatctcataagtcttaactttctcaaacacgtcctttaact 26388306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 15496083 - 15496138
Alignment:
Q  74 tattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatct 129  Q
    ||||||||||||||||||||||| ||||| || ||||||| |||||||||||||||    
T  15496083 tattcaatttggtcccataagtcttaactttcacaaacacgtcccttaactcatct 15496138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 43814703 - 43814641
Alignment:
Q  32 tttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataag 94  Q
    |||||| |||||||||||| ||||||  |||| ||||||||||||||||||||||| ||||||    
T  43814703 tttaggtttaattgatctgtcggtcccctaacatatttcttttattcaatttggtctcataag 43814641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 43814599 - 43814641
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcccataagtc 96  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  43814599 gtcctttaacttatttcttttattcaatttgatcacataagtc 43814641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 16602873 - 16602939
Alignment:
Q  165 cgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||| ||||| ||| ||||| ||||| |||  ||||||||||||||||| ||| |||||||||||||    
T  16602873 cgttggattacggatgtctatcagattttacagtgtatcaccaacacctaatttatttactttcttc 16602939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 38243995 - 38243961
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  38243995 gtcccttaacttatttcttttattcaatttggtcc 38243961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 370925 - 370985
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||| || |||| |||||||||||||||||||| |||   |||||||||||| |||||||    
T  370925 gtctatcaaatctaatggtgtatcaccaacacctaattatattactttcttcatcttcttc 370985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 241
Target Start/End: Complemental strand, 18820875 - 18820669
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatctttc-g 133  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| || ||||| | ||||||   ||||| |||||| ||| |      
T  18820875 aggcttaattgatctaccggtcccttaacttatttcttttattcaatttggtctcataaatcttaacttttgcaaactggtccctcaactca-cttactt 18820777  T
Q  134 ttaatcaatgtgatcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcac 233  Q
    ||||||||| || ||||| |||||| ||||||||| ||| || || |||||| |||| | || ||||||||| ||||||||||| |||||||||||||      
T  18820776 ttaatcaatatggtccccacaaaaaagagatcgttggataagtgaggtctactagatttgatagtgtatcactaacacctgattcatttactttcttcct 18820677  T
Q  234 cttcttct 241  Q
    ||||||||    
T  18820676 cttcttct 18820669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 52086622 - 52086715
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| || ||||||| ||||||||||    
T  52086622 ttttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaact 52086715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 51693142 - 51693235
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||| ||||||    
T  51693142 ttttaggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcctttaact 51693235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 25181502 - 25181589
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| || ||||||| ||||||||||    
T  25181502 gcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaact 25181589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 51468334 - 51468427
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| || ||||||| ||||||||||    
T  51468334 tttttggcttaattgatctgccggtcccttaacttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaact 51468427  T

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Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 7110225 - 7110314
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||| |||| |||||||||||||| |||||||||| ||||||| ||||| || ||||||| ||||||||||    
T  7110225 aggcttaattgatctgccggtcccttaatttatttcttttatttaatttggtcctataagtcttaactttctcaaacacgtcccttaact 7110314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 40187601 - 40187669
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataact 102  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  40187601 taggcttaattgatctgacggtcctttcacttatttcttttattcaatttggtcccataagtcttaact 40187669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 50485108 - 50485026
Alignment:
Q  42 attgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||| || ||||||| ||||||||||    
T  50485108 attgatctgccggtcccttaacttatttcatttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaact 50485026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 17244175 - 17244263
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||| | |||||||| | ||||||||||||||||||||||||||||||||||||||  |||| || ||||||| ||||||||||    
T  17244175 ggcttaattaacctgccggttccttaacttatttcttttattcaatttggtcccataagtctcaactttctcaaacacgtcccttaact 17244263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 1823411 - 1823350
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtc 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  1823411 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttagtcacataagtc 1823350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 5488985 - 5488908
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacac 113  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||| || |||||||    
T  5488985 ggcttaattgatccgccgatcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacac 5488908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 17245783 - 17245694
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||| |||||| | |||| |||||||||||||||||||||||| |||||||| ||||| || ||||||  ||||||||||    
T  17245783 aggcttaattgatccgccggttccttaatttatttcttttattcaatttggtctcataagtcttaactctctcaaacaagtcccttaact 17245694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 18819261 - 18819348
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||||||||||||||||| | |||| |||||| |||||||||||||| ||||||||||| ||||| || ||| ||| ||||||||    
T  18819261 aggcttaattgatctgccggttccttaaattattttttttattcaatttgatcccataagtcttaactttctcaatcacgtcccttaa 18819348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 52759362 - 52759456
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaactcatct 129  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||  |||||||| ||||| || |||| || ||| |||||| ||||    
T  52759362 aggcttaattgatctgccgatcccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatct 52759456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 45229718 - 45229633
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||| |||||| |||| |||||||||||||||||||||||| ||||| || ||| | || ||||||| ||||||||||    
T  45229718 ttaattgatctgtcggtcccttaatttatttcttttattcaatttggtctcataaatcttaattttctcaaacacgtcccttaact 45229633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 51469020 - 51468931
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||| | |||| ||||||||||| ||||||||||||||||||||||| || ||||| |  ||||||| ||||| ||||    
T  51469020 aggcttaattgatctgtcagtcccttaacttattttttttattcaatttggtcccataaatcttaactttttcaaacacgtccctaaact 51468931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 50483508 - 50483570
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtc 96  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||| ||||||||    
T  50483508 ttaggcttaattgatctgtcggtc-tttaacttatttcttgtattcaatttggtctcataagtc 50483570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 52761668 - 52761602
Alignment:
Q  22 gatattatgttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcc 88  Q
    ||||| || ||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  52761668 gatatcatatttaaggcttaattgatatgccggttccttaacttatttcttttattcaatttggtcc 52761602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 38235252 - 38235179
Alignment:
Q  51 ccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||| |||| ||||||||||||||||||||||||  ||||||| ||||| || ||||||| ||||||||||    
T  38235252 ccggtcccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaact 38235179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 5488502 - 5488589
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||  ||||| |||| ||||||||||||||||||||| | ||||||| | ||||| || ||||||| ||| ||||||    
T  5488502 gcttaattgatctgttggtcccttaatttatttcttttattcaatttgattccataagacttaactttctcaaacacgtcctttaact 5488589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 7111464 - 7111370
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||| ||||| |||| |||||||| |||||||| ||| |||||||||||||  |||||||    
T  7111464 atcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttcttcttcttc 7111370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 7111583 - 7111505
Alignment:
Q  46 atctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||| ||||| | |||| ||||||||||||||||||||||||| ||||||| ||||| || ||||||| ||| ||||||    
T  7111583 atctcccggttccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtccattaact 7111505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 47532961 - 47533023
Alignment:
Q  40 taattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataact 102  Q
    |||||||||||||||||| |||| |||||| ||||||||||||||||| ||||| || |||||    
T  47532961 taattgatctgccggtcccttaagttattttttttattcaatttggtctcataaatcttaact 47533023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 45228283 - 45228332
Alignment:
Q  44 tgatctgccggtcctttaacttatttcttttattcaatttggtcccataa 93  Q
    |||||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  45228283 tgatctgccggttctttaacttatttcttttatttaattttgtcccataa 45228332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 47533808 - 47533749
Alignment:
Q  181 tctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    |||| ||||| |||| ||||||||||||||||| ||| |||||||||||||| |||||||    
T  47533808 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttcatcttcttc 47533749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 52761585 - 52761502
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttct 229  Q
    ||||||| ||||| |||| |||| ||||  ||| ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||    
T  52761585 atcccctgaaaaaagagaccgttggattgcggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 52761502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 40723159 - 40723097
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataa 93  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||| ||| ||| ||||    
T  40723159 ttttaggcttaattgaactcccggtcctttaacttaattctttttttcaaattgatcctataa 40723097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 51693279 - 51693361
Alignment:
Q  149 ccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    |||| ||||| |||| |||| ||||| ||| ||||| | ||| |||| ||||||||||||||||| ||| |||||||||||||    
T  51693279 ccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacctaatttatttactttcttc 51693361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 52087869 - 52087815
Alignment:
Q  59 ttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacac 113  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||| || |||||||    
T  52087869 ttaacttatttcttttattcaatttggtctcatatgtcttaactttctcaaacac 52087815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 7110355 - 7110440
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| ||||||||| ||||  ||| ||||| ||||| |||| |||||||| |||| ||| ||| |||||||||||||    
T  7110355 atcccctaaaaaaagagatcgttggattgcggaggtctatcagattttatagtgtatcatcaacgcctaatttatttactttcttc 7110440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 47533970 - 47533913
Alignment:
Q  38 cttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagt 95  Q
    |||||||||||||| ||||  |||| |||||||||||||| ||||| |||||||||||    
T  47533970 cttaattgatctgctggtctcttaaattatttcttttatttaatttagtcccataagt 47533913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 51693225 - 51693257
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggt 86  Q
    |||||||||||||||||||||||||||||||||    
T  51693225 gtcctttaacttatttcttttattcaatttggt 51693257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 52759526 - 52759586
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||  |||||||    
T  52759526 gtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttcttc 52759586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 40187731 - 40187798
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacct 213  Q
    ||||||| ||||| |||| |||| ||||| ||| ||||| ||||| |||| |||||||||||||||||    
T  40187731 atcccctaaaaaaagagaccgttggattacggaggtctatcagattttatcgtgtatcaccaacacct 40187798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 88
Target Start/End: Original strand, 45228356 - 45228387
Alignment:
Q  57 ctttaacttatttcttttattcaatttggtcc 88  Q
    ||||||||||||||||||||||||||||||||    
T  45228356 ctttaacttatttcttttattcaatttggtcc 45228387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 5488579 - 5488609
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttg 84  Q
    |||||||||||||||||||||||||||||||    
T  5488579 gtcctttaacttatttcttttattcaatttg 5488609  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 50485036 - 50485002
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  50485036 gtcccttaacttatttcttttattcaatttggtcc 50485002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 51468417 - 51468451
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  51468417 gtcccttaacttatttcttttattcaatttggtcc 51468451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 5488902 - 5488873
Alignment:
Q  59 ttaacttatttcttttattcaatttggtcc 88  Q
    ||||||||||||||||||||||||||||||    
T  5488902 ttaacttatttcttttattcaatttggtcc 5488873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 50483664 - 50483724
Alignment:
Q  170 gattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||| |||||||||| |||| |||| |||||| |||||||||| ||| |||||||||||||    
T  50483664 gattacggaagtctac-agattttatcgtgtataaccaacacctaatttatttactttcttc 50483724  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 51089933 - 51089876
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccata 92  Q
    ||||||||||||||  ||||||| |||||||| ||||||| || || |||||||||||    
T  51089933 aggcttaattgatcctccggtcccttaacttaattctttttttaaaattggtcccata 51089876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 21202960 - 21203012
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttgg 85  Q
    |||||||||||||| || ||||||| |||||||| || |||| ||||||||||    
T  21202960 ttaggcttaattgaactcccggtcccttaacttaattattttcttcaatttgg 21203012  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 21203140 - 21203224
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttctt 230  Q
    ||||||| ||||| |||| |||| |||||   | ||||| ||||| |||| |||||||| |||||||| ||| ||||||||||||    
T  21203140 atcccctaaaaaaagagaccgttggattacaaaggtctatcagattttatagtgtatcatcaacacctaatttatttactttctt 21203224  T

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Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 12373840 - 12373751
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| || ||||||| ||||||||||    
T  12373840 aggcttaattgatccgccggtcctttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaact 12373751  T

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Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 18654295 - 18654384
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||    
T  18654295 aggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaact 18654384  T

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Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 12372309 - 12372402
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| || ||||||| || |||||||    
T  12372309 ttttaggcttaattgatctgccggtcccttaacttatttgttttattcaatttggtctcataagtcttaactttctcaaacacgtctcttaact 12372402  T

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Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 13276814 - 13276907
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||| | || ||||||| ||||||||||    
T  13276814 ttttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttaact 13276907  T

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Target: chr5; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 39350764 - 39350675
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||||| || ||||||| ||||||||||    
T  39350764 aggcttaattgatatgccggtcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaact 39350675  T

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Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 8447077 - 8447165
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||||| || ||||||| ||||||||||    
T  8447077 ggcttaattgatctaccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaact 8447165  T

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Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 18655772 - 18655684
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||    
T  18655772 taggcttaattgatctgccggttccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaa 18655684  T

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Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 19230194 - 19230103
Alignment:
Q  33 ttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||| ||||| || ||||||| ||||||||||    
T  19230194 ttaggcttaattgatctgccgatcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaact 19230103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 35952566 - 35952466
Alignment:
Q  24 tattatgttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaac 123  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| ||||| || ||||| |  ||||| | |||||||||    
T  35952566 tattatgttttaggcttaactgatctgtcagtcctttaacttatttcttttattcaatttggtctcataaatcttaactttgtcaaacgcgtcccttaac 35952467  T
Q  124 t 124  Q
    |    
T  35952466 t 35952466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 39349480 - 39349568
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || ||||| || ||||||| ||| ||||||    
T  39349480 ggcttaattgatctgacggtcctttaacttatttcttttattcaatttggttccataactcttaactttctcaaacacgtcctttaact 39349568  T

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Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 19228840 - 19228926
Alignment:
Q  38 cttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||| || ||||||| | ||||||||    
T  19228840 cttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgttccttaact 19228926  T

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Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 9083419 - 9083326
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||| ||||||||||||||||||||   |||| | ||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||    
T  9083419 tttttggcttaattgatctgccggtttcttaattcatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaact 9083326  T

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Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 9081977 - 9082067
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||| ||||| | |||||| ||||||||||||||||||| | ||||||||| ||||| || ||||||| ||||||||||    
T  9081977 taggcttaattgatctaccggttccttaactcatttcttttattcaatttgattccataagtcttaactttctcaaacacgtcccttaact 9082067  T

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Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 13278346 - 13278261
Alignment:
Q  39 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||| |||||| |||| |||||| ||||||||||||||||| |||||||| ||||| || ||||||| ||||||||||    
T  13278346 ttaattgatctgtcggtcccttaatttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaact 13278261  T

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Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 6801972 - 6802062
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||| ||||||||||||| ||||| |||||||||||||||| || ||||||||| |||||||| ||| | || ||||||| ||||||||||    
T  6801972 taggtttaattgatctgctggtcccttaacttatttcttttttttaatttggtctcataagtcttaattttctcaaacacgtcccttaact 6802062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 25001643 - 25001717
Alignment:
Q  37 gcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaac 111  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||| |  |||||||| ||||| ||||||||    
T  25001643 gcttaattgatatgtcggtcctttaacttatttcttttattcaatttgatttcataagtcttaactttcgcaaac 25001717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 4031876 - 4031933
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  4031876 tttttggcttaattgatctgccggtcacttaacttatttcttttattcaatttagtcc 4031933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 6803742 - 6803682
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtc 96  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||||||| ||||||||    
T  6803742 ggcttaattgatctgtcggtcccttaatttatttcttttatttaatttggtcacataagtc 6803682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 13278211 - 13278125
Alignment:
Q  155 aaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttct 241  Q
    |||| |||| |||| ||||||||| ||||| ||||| |||| ||||||||||||||||| ||| ||||||||| |||  ||||||||    
T  13278211 aaaaagagaccgttggattagggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttattcttcttcttct 13278125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 39164056 - 39164144
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||||| ||||| |||||||     ||||||||||||| ||| |||||||| ||||| |  ||||||| ||||||||||    
T  39164056 ttttaggcttaattgatctgctggtccattaactt-----ttttattcaatttagtctcataagtcttaactttatcaaacacgtcccttaact 39164144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 19230062 - 19229968
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||||||||| |||| |||| ||||| ||| ||||| || || |||| |||||||| |||||| | ||| |||||||||||||  |||||||    
T  19230062 atcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcatcaacacttaatttatttactttcttcttcttcttc 19229968  T

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Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 4031958 - 4032046
Alignment:
Q  154 aaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgatt--gatttactttcttcaccttcttc 240  Q
    ||||| |||| ||||  |||| ||||||||||||||| |||| ||||||||||||||||| |||   |||||||||||||  |||||||    
T  4031958 aaaaaagagaccgttgaattacggaagtctaccagattttatagtgtatcaccaacacctaatttatatttactttcttcttcttcttc 4032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 19228967 - 19229052
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| |||| |||| ||||| ||| |||||  |||| |||| |||||||| |||||||| ||| |||||||||||||    
T  19228967 atcccctaaaaaaagagaccgttggattacggaggtctattagattttatagtgtatcatcaacacctaatttatttactttcttc 19229052  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 42962152 - 42962241
Alignment:
Q  151 ctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||||| ||| |||| ||| | ||| |||||  |||||| |||||||||||||||||||| |||   |||||||||||| |||||||    
T  42962152 ctcaaaaagaagaccgttggataaaggaggtctataagatctaatggtgtatcaccaacacctaattatattactttcttcatcttcttc 42962241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 1012180 - 1012120
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagt 95  Q
    |||||||||||| |  |||||||||||||||| |||||||||| || ||||||||| ||||    
T  1012180 aggcttaattgaacacccggtcctttaacttaattcttttatttaaattggtcccaaaagt 1012120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 12372477 - 12372537
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||| ||||| |||| ||||||||||||||||| ||| |||||||||||||  |||||||    
T  12372477 gtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttcttc 12372537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 4033081 - 4033031
Alignment:
Q  38 cttaattgatctgccggtcctttaacttatttcttttattcaatttggtcc 88  Q
    ||||||||||||| || ||||||||||||||| ||||||| || |||||||    
T  4033081 cttaattgatctgtcgatcctttaacttattttttttatttaacttggtcc 4033031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 6803582 - 6803520
Alignment:
Q  178 aagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    ||||||| ||||| |||| |||||||||||||| || ||| |||||||||||||  |||||||    
T  6803582 aagtctatcagattttatagtgtatcaccaacatctaatttatttactttcttcttcttcttc 6803520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 9082057 - 9082091
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  9082057 gtcccttaacttatttcttttattcaatttggtcc 9082091  T

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Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 39164134 - 39164168
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  39164134 gtcccttaacttatttcttttattcaatttggtcc 39164168  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 6803659 - 6803630
Alignment:
Q  59 ttaacttatttcttttattcaatttggtcc 88  Q
    ||||||||||||||||||||||||||||||    
T  6803659 ttaacttatttcttttattcaatttggtcc 6803630  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 13276897 - 13276930
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtc 87  Q
    |||| |||||||||||||||||||||||||||||    
T  13276897 gtcccttaacttatttcttttattcaatttggtc 13276930  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 39349609 - 39349694
Alignment:
Q  146 atcccctcaaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 231  Q
    ||||||| ||||| | || |||| ||||| ||| |||||  |||| |||| ||| ||||||||||||| ||| |||||||||||||    
T  39349609 atcccctaaaaaaagtgaccgtttgattacggaggtctattagattttatcgtggatcaccaacacctaatttatttactttcttc 39349694  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 1010828 - 1010888
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagt 95  Q
    |||||||||||| |  ||||||| |||| ||| ||||||||||||| ||||||||| ||||    
T  1010828 aggcttaattgaacatccggtcccttaatttaattcttttattcaaattggtcccaaaagt 1010888  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 14356589 - 14356649
Alignment:
Q  180 gtctaccagatcttatggtgtatcaccaacacctgattga-tttactttcttcaccttctt 239  Q
    ||||| || |||| || ||||||||||||||||||||| | ||||||||||||| ||||||    
T  14356589 gtctatcacatctaattgtgtatcaccaacacctgatttattttactttcttcatcttctt 14356649  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 39349558 - 39349590
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggt 86  Q
    |||||||||||||||||||||| ||||||||||    
T  39349558 gtcctttaacttatttcttttactcaatttggt 39349590  T

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Target: scaffold0878 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 3147 - 3057
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||| || || |||| ||||||||||    
T  3147 taggcttaattgatctgccagtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcagacacgtcccttaact 3057  T

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Target: scaffold0878; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 1847 - 1881
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  1847 gtcccttaacttatttcttttattcaatttggtcc 1881  T

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Target: scaffold0878; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 3067 - 3033
Alignment:
Q  54 gtcctttaacttatttcttttattcaatttggtcc 88  Q
    |||| ||||||||||||||||||||||||||||||    
T  3067 gtcccttaacttatttcttttattcaatttggtcc 3033  T

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Target: scaffold0141 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 35408 - 35315
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||| ||||    
T  35408 tttttggcttaattgatctggcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaact 35315  T

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Target: scaffold0141; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 31033 - 31121
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||| ||||    
T  31033 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaact 31121  T

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Target: scaffold0049 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 79404 - 79497
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||| ||||    
T  79404 tttttggcttaattgatctggcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaact 79497  T

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Target: scaffold0049; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 83779 - 83691
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||| ||||    
T  83779 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaact 83691  T

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Target: scaffold1425 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 1720 - 1633
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| || ||||||| ||| ||||    
T  1720 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcctttaa 1633  T

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Target: scaffold1425; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 132 - 220
Alignment:
Q  34 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||| ||| ||||    
T  132 taggcttaattgatctgccagtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcctttaa 220  T

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Target: scaffold0018 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 25463 - 25377
Alignment:
Q  36 ggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaa 122  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||    
T  25463 ggcttaattgatctgccgctcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaa 25377  T

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Target: scaffold0026 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 104297 - 104389
Alignment:
Q  32 tttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcataactgtcgcaaacacatcccttaact 124  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||  ||||  || ||||||| ||||||||||    
T  104297 tttaggcttaattgatttgacggtcccttaacttatttcttttattcaatttggtcccataagttttaacattctcaaacacgtcccttaact 104389  T

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Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 104405 - 104474
Alignment:
Q  171 attagggaagtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcaccttcttc 240  Q
    |||| ||| ||||| ||||| |||| |||||||||||||| || ||| |||||||||||||  |||||||    
T  104405 attacggaggtctatcagattttatagtgtatcaccaacatctaatttatttactttcttcttcttcttc 104474  T

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Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 21131 - 21195
Alignment:
Q  31 ttttaggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataagt 95  Q
    |||||||||||||||| |  ||||||| |||||||| ||||||||||||| ||||||||| ||||    
T  21131 ttttaggcttaattgaacgcccggtcccttaacttaattcttttattcaaattggtcccaaaagt 21195  T

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Target: scaffold0349 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 9156 - 9201
Alignment:
Q  35 aggcttaattgatctgccggtcctttaacttatttcttttattcaa 80  Q
    |||||||||||| || |||||||||||||||| ||||||| |||||    
T  9156 aggcttaattgaactcccggtcctttaacttaattcttttcttcaa 9201  T

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Target: scaffold0349; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 9294 - 9363
Alignment:
Q  154 aaaaaggagatcgttcgattagggaagtctaccagatcttatggtgtatcaccaacacctgattgattta 223  Q
    ||||| |||| |||| ||||| ||| ||||| ||||| |||| ||||||||||||||||| ||| |||||    
T  9294 aaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttattta 9363  T

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