View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12531_low_12 (Length: 222)

Name: NF12531_low_12
Description: NF12531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12531_low_12
NF12531_low_12
[»] chr1 (44 HSPs)
chr1 (55-222)||(24317836-24318003)
chr1 (58-222)||(39568649-39568813)
chr1 (55-222)||(6653766-6653933)
chr1 (56-222)||(26163791-26163957)
chr1 (58-222)||(2481923-2482088)
chr1 (58-222)||(15941500-15941665)
chr1 (57-222)||(39983027-39983192)
chr1 (58-222)||(34270034-34270199)
chr1 (58-222)||(34276269-34276434)
chr1 (58-221)||(52043667-52043830)
chr1 (62-222)||(40535923-40536084)
chr1 (45-222)||(52025307-52025484)
chr1 (57-222)||(11172616-11172781)
chr1 (57-222)||(28852099-28852265)
chr1 (58-222)||(44722562-44722727)
chr1 (56-222)||(2137632-2137797)
chr1 (57-222)||(33009979-33010144)
chr1 (58-222)||(42948847-42949012)
chr1 (58-222)||(49823856-49824021)
chr1 (55-221)||(13234589-13234759)
chr1 (58-222)||(14246512-14246677)
chr1 (55-222)||(20582253-20582420)
chr1 (56-207)||(40400697-40400849)
chr1 (58-222)||(50728512-50728677)
chr1 (57-222)||(18909831-18909997)
chr1 (126-222)||(51676555-51676650)
chr1 (1-57)||(30231410-30231466)
chr1 (119-202)||(1701368-1701451)
chr1 (119-179)||(24526975-24527035)
chr1 (119-179)||(7009760-7009820)
chr1 (119-179)||(8113089-8113149)
chr1 (119-167)||(17702809-17702857)
chr1 (119-158)||(6015830-6015869)
chr1 (120-179)||(24663556-24663615)
chr1 (119-173)||(23443513-23443567)
chr1 (119-179)||(9639962-9640022)
chr1 (119-179)||(26308374-26308434)
chr1 (119-167)||(29921103-29921151)
chr1 (119-179)||(32562223-32562283)
chr1 (119-158)||(13073931-13073970)
chr1 (119-147)||(19247116-19247144)
chr1 (122-154)||(40499365-40499397)
chr1 (119-179)||(45942236-45942296)
chr1 (119-179)||(51001248-51001308)
[»] chr7 (45 HSPs)
chr7 (57-222)||(32541393-32541558)
chr7 (57-222)||(40704719-40704885)
chr7 (57-222)||(46321322-46321486)
chr7 (56-222)||(46924560-46924727)
chr7 (57-222)||(40995845-40996011)
chr7 (55-222)||(7791536-7791704)
chr7 (55-222)||(21873755-21873923)
chr7 (58-222)||(27325522-27325686)
chr7 (56-222)||(26015098-26015264)
chr7 (57-222)||(42094762-42094928)
chr7 (57-222)||(43246239-43246405)
chr7 (58-222)||(47065149-47065314)
chr7 (56-222)||(8214924-8215091)
chr7 (58-222)||(10533298-10533463)
chr7 (58-222)||(32661582-32661747)
chr7 (58-222)||(7901123-7901289)
chr7 (57-207)||(21278264-21278415)
chr7 (57-222)||(39073652-39073818)
chr7 (58-222)||(19699678-19699842)
chr7 (58-217)||(35924792-35924952)
chr7 (58-222)||(38875359-38875524)
chr7 (55-203)||(25877481-25877630)
chr7 (56-222)||(34592365-34592531)
chr7 (60-207)||(38282930-38283078)
chr7 (58-207)||(47778767-47778917)
chr7 (79-222)||(40994134-40994278)
chr7 (119-202)||(19020518-19020601)
chr7 (119-208)||(48642537-48642626)
chr7 (119-179)||(20493556-20493616)
chr7 (119-179)||(242367-242427)
chr7 (119-179)||(42435677-42435737)
chr7 (119-179)||(47541156-47541216)
chr7 (119-173)||(39596994-39597048)
chr7 (119-156)||(7883141-7883178)
chr7 (122-179)||(40863240-40863297)
chr7 (119-179)||(29042749-29042809)
chr7 (119-159)||(41469463-41469503)
chr7 (119-179)||(47011177-47011237)
chr7 (119-158)||(25226320-25226359)
chr7 (119-158)||(25236152-25236191)
chr7 (124-179)||(30172885-30172940)
chr7 (119-158)||(40304841-40304880)
chr7 (119-160)||(30121020-30121061)
chr7 (119-179)||(12846703-12846763)
chr7 (119-159)||(37544971-37545011)
[»] chr4 (52 HSPs)
chr4 (58-222)||(43829521-43829685)
chr4 (57-222)||(20738404-20738569)
chr4 (55-222)||(55220524-55220692)
chr4 (55-222)||(46563747-46563914)
chr4 (57-220)||(614489-614651)
chr4 (57-222)||(55214868-55215034)
chr4 (55-222)||(56363360-56363528)
chr4 (53-222)||(20434769-20434939)
chr4 (57-222)||(42723406-42723572)
chr4 (58-222)||(42349357-42349522)
chr4 (55-222)||(19873350-19873518)
chr4 (58-222)||(39539734-39539898)
chr4 (55-222)||(52912423-52912591)
chr4 (58-222)||(38291157-38291323)
chr4 (58-222)||(37233438-37233604)
chr4 (58-222)||(56017714-56017879)
chr4 (56-207)||(1356316-1356468)
chr4 (58-222)||(55182793-55182958)
chr4 (56-222)||(23894459-23894626)
chr4 (119-222)||(52839050-52839153)
chr4 (58-222)||(53874310-53874475)
chr4 (61-207)||(10541383-10541531)
chr4 (58-222)||(28405712-28405877)
chr4 (56-191)||(5098717-5098853)
chr4 (58-151)||(31710524-31710618)
chr4 (119-167)||(25858353-25858401)
chr4 (119-179)||(32136216-32136276)
chr4 (119-172)||(7795285-7795338)
chr4 (119-179)||(3025542-3025602)
chr4 (119-179)||(8713960-8714020)
chr4 (119-159)||(15506563-15506603)
chr4 (119-179)||(35338867-35338927)
chr4 (58-158)||(37829756-37829856)
chr4 (119-179)||(43457531-43457591)
chr4 (119-158)||(24035351-24035390)
chr4 (119-158)||(51320635-51320674)
chr4 (189-222)||(25858319-25858352)
chr4 (119-167)||(7818427-7818475)
chr4 (119-155)||(13961610-13961646)
chr4 (119-178)||(1536927-1536986)
chr4 (119-158)||(10480553-10480592)
chr4 (119-158)||(11691715-11691754)
chr4 (119-158)||(20292551-20292590)
chr4 (121-156)||(24897676-24897711)
chr4 (119-158)||(32933511-32933550)
chr4 (119-158)||(34160216-34160255)
chr4 (119-158)||(37682534-37682573)
chr4 (119-179)||(1523663-1523723)
chr4 (119-179)||(3027312-3027372)
chr4 (119-179)||(30215033-30215093)
chr4 (123-179)||(50469864-50469920)
chr4 (119-179)||(51323355-51323415)
[»] chr3 (40 HSPs)
chr3 (57-222)||(33711948-33712113)
chr3 (58-222)||(37970938-37971103)
chr3 (57-222)||(4515271-4515435)
chr3 (58-222)||(22781074-22781239)
chr3 (58-222)||(33967576-33967741)
chr3 (56-222)||(10840657-10840824)
chr3 (57-222)||(41070541-41070707)
chr3 (57-222)||(20834776-20834941)
chr3 (58-222)||(36430973-36431138)
chr3 (55-222)||(25711585-25711753)
chr3 (58-222)||(32236957-32237122)
chr3 (58-222)||(38871782-38871947)
chr3 (58-221)||(7149232-7149399)
chr3 (58-222)||(4044042-4044207)
chr3 (58-222)||(20656519-20656684)
chr3 (55-222)||(24395856-24396025)
chr3 (56-207)||(20048981-20049133)
chr3 (61-207)||(672740-672883)
chr3 (58-192)||(53974959-53975092)
chr3 (57-207)||(10999013-10999166)
chr3 (58-207)||(40585389-40585538)
chr3 (61-207)||(26091022-26091165)
chr3 (56-173)||(85339-85457)
chr3 (119-192)||(6267630-6267703)
chr3 (58-173)||(7678653-7678769)
chr3 (119-202)||(54556924-54557007)
chr3 (119-191)||(8947127-8947199)
chr3 (119-173)||(24200320-24200374)
chr3 (119-158)||(38144404-38144443)
chr3 (119-158)||(48585511-48585550)
chr3 (119-158)||(49779027-49779066)
chr3 (119-208)||(39626156-39626246)
chr3 (122-179)||(52343639-52343696)
chr3 (119-179)||(4595711-4595771)
chr3 (119-151)||(41589573-41589605)
chr3 (119-159)||(47097559-47097599)
chr3 (119-158)||(52813814-52813853)
chr3 (119-151)||(11124513-11124545)
chr3 (127-179)||(23483288-23483340)
chr3 (119-179)||(28412112-28412172)
[»] chr6 (19 HSPs)
chr6 (55-222)||(6167246-6167413)
chr6 (58-222)||(13889307-13889472)
chr6 (57-222)||(18894401-18894567)
chr6 (56-222)||(7141870-7142037)
chr6 (57-222)||(25332149-25332315)
chr6 (55-220)||(29121627-29121791)
chr6 (57-222)||(6625990-6626156)
chr6 (58-197)||(25331634-25331773)
chr6 (58-207)||(3095219-3095368)
chr6 (119-207)||(29629824-29629912)
chr6 (50-110)||(29623920-29623980)
chr6 (119-179)||(8526011-8526071)
chr6 (119-179)||(18024894-18024954)
chr6 (119-179)||(31090506-31090566)
chr6 (119-158)||(29880686-29880725)
chr6 (119-179)||(5715644-5715704)
chr6 (119-179)||(29622635-29622695)
chr6 (119-158)||(11368094-11368133)
chr6 (119-159)||(12602293-12602333)
[»] chr2 (37 HSPs)
chr2 (55-222)||(21658577-21658744)
chr2 (57-222)||(35896412-35896578)
chr2 (57-222)||(2389931-2390096)
chr2 (55-222)||(25852647-25852815)
chr2 (57-222)||(42343618-42343782)
chr2 (55-222)||(44144066-44144235)
chr2 (58-222)||(13195451-13195616)
chr2 (57-222)||(34202961-34203126)
chr2 (58-222)||(43577589-43577754)
chr2 (58-222)||(927655-927819)
chr2 (55-222)||(32550872-32551040)
chr2 (57-222)||(37094720-37094886)
chr2 (58-222)||(3178897-3179062)
chr2 (59-222)||(40810987-40811151)
chr2 (56-222)||(1482523-1482690)
chr2 (70-219)||(1520878-1521028)
chr2 (57-222)||(39697075-39697241)
chr2 (58-207)||(10639409-10639558)
chr2 (58-179)||(15012492-15012613)
chr2 (119-179)||(31639767-31639827)
chr2 (167-222)||(27980312-27980367)
chr2 (167-222)||(28066842-28066897)
chr2 (55-156)||(44799465-44799567)
chr2 (119-158)||(4072626-4072665)
chr2 (119-158)||(4330766-4330805)
chr2 (119-158)||(38628301-38628340)
chr2 (119-158)||(44456078-44456117)
chr2 (119-179)||(8033997-8034057)
chr2 (119-179)||(13479702-13479762)
chr2 (119-158)||(7721774-7721813)
chr2 (121-156)||(10554204-10554239)
chr2 (119-158)||(40658543-40658582)
chr2 (121-156)||(45442895-45442930)
chr2 (119-160)||(932107-932148)
chr2 (55-96)||(38628236-38628277)
chr2 (119-179)||(10522410-10522470)
chr2 (119-179)||(16312857-16312917)
[»] chr8 (51 HSPs)
chr8 (57-222)||(11588758-11588924)
chr8 (61-218)||(23356557-23356714)
chr8 (54-222)||(26290026-26290195)
chr8 (54-222)||(26303283-26303452)
chr8 (54-222)||(26315277-26315446)
chr8 (56-222)||(37578881-37579048)
chr8 (58-222)||(34918094-34918259)
chr8 (55-222)||(15840451-15840619)
chr8 (59-222)||(5599145-5599309)
chr8 (59-222)||(5635966-5636130)
chr8 (57-222)||(17602304-17602471)
chr8 (57-222)||(3032194-3032360)
chr8 (57-222)||(39365940-39366106)
chr8 (58-222)||(43663602-43663767)
chr8 (55-222)||(24821982-24822150)
chr8 (58-222)||(8376877-8377042)
chr8 (61-222)||(35605997-35606158)
chr8 (57-222)||(42512841-42513007)
chr8 (58-222)||(34564316-34564480)
chr8 (58-203)||(12713389-12713535)
chr8 (58-197)||(26294410-26294550)
chr8 (58-197)||(26307667-26307807)
chr8 (119-207)||(3136556-3136644)
chr8 (119-222)||(16633858-16633961)
chr8 (145-222)||(26121950-26122027)
chr8 (55-173)||(28884675-28884794)
chr8 (58-173)||(28910662-28910778)
chr8 (145-207)||(5988823-5988885)
chr8 (58-158)||(28152213-28152312)
chr8 (119-179)||(38946604-38946664)
chr8 (119-179)||(44025509-44025569)
chr8 (127-202)||(7969256-7969331)
chr8 (119-158)||(33772115-33772154)
chr8 (119-158)||(35329002-35329041)
chr8 (119-158)||(39713412-39713451)
chr8 (127-173)||(1848309-1848355)
chr8 (50-179)||(5346738-5346868)
chr8 (119-173)||(43576086-43576140)
chr8 (119-179)||(31792969-31793029)
chr8 (119-179)||(38459270-38459330)
chr8 (119-159)||(44696387-44696427)
chr8 (119-158)||(6409-6448)
chr8 (119-158)||(4006594-4006633)
chr8 (59-110)||(26121910-26121961)
chr8 (119-158)||(38167742-38167781)
chr8 (119-173)||(40184721-40184775)
chr8 (122-158)||(2827588-2827624)
chr8 (58-110)||(5988874-5988926)
chr8 (119-151)||(41941295-41941327)
chr8 (119-179)||(42687113-42687173)
chr8 (119-179)||(44026398-44026458)
[»] scaffold0438 (1 HSPs)
scaffold0438 (54-222)||(1363-1532)
[»] chr5 (37 HSPs)
chr5 (58-222)||(6468966-6469131)
chr5 (55-222)||(4155405-4155572)
chr5 (58-222)||(38759657-38759822)
chr5 (58-222)||(31510707-31510871)
chr5 (62-221)||(9066341-9066500)
chr5 (58-222)||(33281509-33281674)
chr5 (58-222)||(37866532-37866697)
chr5 (58-222)||(43292946-43293111)
chr5 (119-222)||(29921099-29921202)
chr5 (58-222)||(25143631-25143794)
chr5 (61-222)||(13145154-13145318)
chr5 (58-222)||(25085659-25085824)
chr5 (55-207)||(43517552-43517705)
chr5 (58-207)||(19616875-19617021)
chr5 (58-222)||(19033978-19034149)
chr5 (57-192)||(24559771-24559907)
chr5 (57-192)||(24600804-24600938)
chr5 (119-179)||(41881065-41881125)
chr5 (119-158)||(31499674-31499713)
chr5 (119-158)||(36294728-36294767)
chr5 (119-158)||(38769155-38769194)
chr5 (57-143)||(43149270-43149357)
chr5 (130-171)||(35318725-35318766)
chr5 (119-179)||(7339652-7339712)
chr5 (119-179)||(10665348-10665408)
chr5 (119-179)||(18522843-18522903)
chr5 (119-158)||(4622046-4622085)
chr5 (119-158)||(6246113-6246152)
chr5 (119-158)||(15021218-15021257)
chr5 (121-156)||(27309784-27309819)
chr5 (119-189)||(29385574-29385644)
chr5 (119-158)||(37106878-37106917)
chr5 (119-158)||(40740022-40740061)
chr5 (119-179)||(10553027-10553087)
chr5 (119-179)||(13210232-13210292)
chr5 (119-179)||(15271890-15271950)
chr5 (119-179)||(24478261-24478321)
[»] scaffold0391 (1 HSPs)
scaffold0391 (58-222)||(4669-4835)
[»] scaffold0368 (1 HSPs)
scaffold0368 (58-222)||(14520-14685)
[»] scaffold0062 (1 HSPs)
scaffold0062 (58-222)||(41184-41349)
[»] scaffold0007 (2 HSPs)
scaffold0007 (55-192)||(156353-156492)
scaffold0007 (119-179)||(200692-200752)
[»] scaffold0065 (1 HSPs)
scaffold0065 (57-173)||(37354-37471)
[»] scaffold0672 (1 HSPs)
scaffold0672 (119-179)||(6850-6910)
[»] scaffold0855 (1 HSPs)
scaffold0855 (119-179)||(104-164)
[»] scaffold0847 (1 HSPs)
scaffold0847 (119-179)||(269-329)


Alignment Details
Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 24318003 - 24317836
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttctt 154  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  24318003 taagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaattttttttataataccaaaattgcccttttatataaattttctt 24317904  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24317903 aaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 24317836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 39568649 - 39568813
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||        ||||||||||||||||| |||||||||||||||||||||    
T  39568649 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaaattataataccaaaattgcctttttatataaattttcttaaa 39568748  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39568749 accctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 39568813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 6653933 - 6653766
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttctt 154  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||        ||||||| ||||||||||||||||||||||||||||    
T  6653933 taagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaattttttttataatactaaaattgcccttttatataaattttctt 6653834  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6653833 aaaaccctaattttattcattgtcagtgagtttcaccctctgtcaccccacaaagcgatcgatcaaac 6653766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 56 - 222
Target Start/End: Original strand, 26163791 - 26163957
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttctta 155  Q
    |||||||||||||||||||||  ||||||||||||||||||  ||||||||||||        |||| |||||||||||| |||||||||||||||||||    
T  26163791 aagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaattttttttataacaccaaaattgcctttttatataaattttctta 26163890  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26163891 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 26163957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 2481923 - 2482088
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  2481923 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaa 2482022  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2482023 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 2482088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 15941665 - 15941500
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  15941665 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaatttttttataataccaaaattgcccttttatataaattttcttaa 15941566  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15941565 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 15941500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 39983192 - 39983027
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||  || |||||||||||||||  ||||||| ||||        ||||||||||||||||||||||||||||||||||||||    
T  39983192 agagtttttctatttacaccccatatttttctggttacacccaaatttttttaaaaatttttataataccaaaattgcccttttatataaattttcttaa 39983093  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39983092 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 39983027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 34270034 - 34270199
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||||||||||||   ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  34270034 gagtttttctatttacaccccatgtttttctggttacatccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaa 34270133  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34270134 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 34270199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 34276269 - 34276434
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||||||||||||   ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  34276269 gagtttttctatttacaccccatgtttttctggttacatccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaa 34276368  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34276369 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 34276434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 52043667 - 52043830
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||||||  || |||||||||||||||  ||||||||||||        ||||||||||||||||||||||||||||||||||||| |    
T  52043667 gagtttttctatttacaccccatatttttctggttacacccaaattttcttaaatttttttataataccaaaattgcccttttatataaattttcttaga 52043766  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaa 221  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  52043767 accctaattttattcattgtcagtgagtttcaccctcttttaccccacaaagcgatcgatcaaa 52043830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 62 - 222
Target Start/End: Original strand, 40535923 - 40536084
Alignment:
Q  62 ttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaaaacc 160  Q
    |||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||||||    
T  40535923 ttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaacc 40536022  T
Q  161 ctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40536023 ctaattttattcattgtcaatgagtttcaccctctttcaccccacaaagcgatcgatcaaac 40536084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 52025484 - 52025307
Alignment:
Q  45 ataaaaaatgtaagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatat 144  Q
    |||| |||| |||||||||||||||||||| |  |||||||||||||||||   ||||||||||||        ||||||||||||||||||||||||||    
T  52025484 ataataaatttaagagtttttctatttacatcccatgtttttctggttacatccaaattttcttaaaaaaaattataataccaaaattgcccttttatat 52025385  T
Q  145 aaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||||    
T  52025384 aaattttcttaaaaccctaattttatttattgtcagtgagtttcaccctctttcactccacaaagcgattgatcaaac 52025307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 11172616 - 11172781
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  |||||||| |||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  11172616 agagtttttctatttacaccc-atgtttttttggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctta 11172714  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11172715 aaaccctaattttattcattgtcagtgagtttcaccctctttcacccctcaaagcgatcgatcaaac 11172781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 28852099 - 28852265
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||| |||||||||||||    
T  28852099 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaaaattataataccaaaattgcccttttacataaattttctta 28852198  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  28852199 aaaccctaattttattcattgtcagtgagtttcaacctctttcaccccacaaagcgattgatcaaac 28852265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 44722727 - 44722562
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||| |  ||||||||||||||||||  ||||||||||||         |||||| |||||||||||||||||||||||||| ||||    
T  44722727 gagtttttctatttacatcccatgtttttctggttacacccaaattttcttaaattttttttataatatcaaaattgcccttttatataaatttttttaa 44722628  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44722627 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 44722562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 56 - 222
Target Start/End: Original strand, 2137632 - 2137797
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttct-ggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||   |||||||||| ||||||||  ||||||||||||         ||||||||||||||| |||||||||||||||||||    
T  2137632 aagagtttttctatttacac---atgtttttcttggttacacccaaattttcttaaaaaaaaattataataccaaaattgtccttttatataaattttct 2137728  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2137729 taaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 2137797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 33009979 - 33010144
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  |||||||| |||||||||  ||||||||||||         ||||||||||||||||||||||| |||||||||||||    
T  33009979 agagtttttctatttacaccc-atgtttttttggttacacccaaattttcttaaattttttttataataccaaaattgcccttttacataaattttctta 33010077  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33010078 aaaccctaattttattcattgtcagtgaatttcaccctctttcaccccacaaagcgatcgatcaaac 33010144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 42949012 - 42948847
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||| |||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||| |    
T  42949012 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttta 42948913  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  42948912 aatcctaattttattcattgtcagtgagtttcaccctctttcaccccacaaaacgatcgatcaaac 42948847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 49824021 - 49823856
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  || |||||||||||| ||  ||||||||||||         ||||||||||||||||| ||||||||||||||||||||    
T  49824021 gagtttttctatttacaccccatatttttctggttatacccaaattttcttaaattttttttataataccaaaattgcctttttatataaattttcttaa 49823922  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49823921 aaccctaattttattcgttgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 49823856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 55 - 221
Target Start/End: Original strand, 13234589 - 13234759
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||    
T  13234589 taagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttct 13234688  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcacc--ctctttca-ccccacaaagcgatcgatcaaa 221  Q
    |||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||| ||||||||||    
T  13234689 taaaaccctaattttattcattgtcagtgagtttcaccctctctttcacccccacaaagccatcgatcaaa 13234759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 14246512 - 14246677
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||| ||||||||||  |||||||||||||||||   ||||||| ||||         ||||||||||||||||||||||||||||||||||||||    
T  14246512 gagtttttttatttacaccccatgtttttctggttacatccaaatttttttaaaagttttttataataccaaaattgcccttttatataaattttcttaa 14246611  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||    
T  14246612 aaccctaattttattcattgccagtgagtttcatcctctttcaccccacaaagcgatcgatcaaac 14246677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 20582420 - 20582253
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||| ||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||| |||||||||||||||| ||    
T  20582420 taagaatttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgtccttttatataaattt-ct 20582322  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20582321 taaaaccctaattttatacgttgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 20582253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 40400849 - 40400697
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||  |||||||| |||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  40400849 aagagtttttctatttacaccccatgtttttttggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctt 40400750  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  40400749 aaaaccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 40400697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 50728677 - 50728512
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt-a 155  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||| |||||| |||| || |    
T  50728677 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttt-atataattttttttta 50728579  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50728578 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 50728512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 18909997 - 18909831
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||| ||||||||||  || ||||| ||||||||| |||||||| ||||         ||||||| ||||||| |||||||||||||||||||||    
T  18909997 agagtttttttatttacaccccatatttttttggttacacctaaatttttttaaaatttttttataatactaaaattgtccttttatataaattttctta 18909898  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18909897 aaatcttaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 18909831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 51676555 - 51676650
Alignment:
Q  126 caaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  51676555 caaaattgcccttttatataaattttcttaaaacc-taattttattcattgtcagtgagtttcaccctctttcaccccataaagcgatcgatcaaac 51676650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30231466 - 30231410
Alignment:
Q  1 accaccatttttaaataaaatctgcggagtaattttaaaataagataaaaaatgtaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30231466 accaccatttttaaataaaatctgcggagtaattttaaaataagataaaaaatgtaa 30231410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 1701368 - 1701451
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccc 202  Q
    ||||||||||||||| | ||| |||||||||||||||||||| | |||||||||| | ||| | ||||||||||||||||||||    
T  1701368 ataataccaaaattgtcatttaatataaattttcttaaaaccttgattttattcattatcactaagtttcaccctctttcaccc 1701451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 24526975 - 24527035
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||| ||||| |||||    
T  24526975 ataataccaaaattgcccttttatataaattttcttaaaatctttatttcattcattgtca 24527035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 7009820 - 7009760
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||||||||||||| ||||||||||||||||||||||| | | |||| ||||| |||||    
T  7009820 ataataccaaaattgctcttttatataaattttcttaaaatctttatttcattcattgtca 7009760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 8113089 - 8113149
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  8113089 ataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 8113149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 17702857 - 17702809
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattt 167  Q
    ||||||||||||||| |||||||||||||||||||||||| | ||||||    
T  17702857 ataataccaaaattgtccttttatataaattttcttaaaatcttaattt 17702809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 6015830 - 6015869
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  6015830 ataataccaaaattgtccttttatataaattttcttaaaa 6015869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 24663556 - 24663615
Alignment:
Q  120 taataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||| |||||||||||||||||||||||||||||||| | | |||| ||||| |||||    
T  24663556 taatactaaaattgcccttttatataaattttcttaaaatcttgatttcattcattgtca 24663615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 23443513 - 23443567
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattca 173  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||| |||||    
T  23443513 ataataccaaaattgtcattttatataaattttcttaaaatcttaatttcattca 23443567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 9639962 - 9640022
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||| |||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  9639962 ataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 9640022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 26308434 - 26308374
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||| |||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  26308434 ataacaccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 26308374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 29921103 - 29921151
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattt 167  Q
    ||||||||||||||| ||||| |||||||||||||||||| | ||||||    
T  29921103 ataataccaaaattgtcctttaatataaattttcttaaaatcttaattt 29921151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 32562283 - 32562223
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||| ||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  32562283 ataatactaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 32562223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 13073970 - 13073931
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  13073970 ataatatcaaaattgtccttttatataaattttcttaaaa 13073931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 19247116 - 19247144
Alignment:
Q  119 ataataccaaaattgcccttttatataaa 147  Q
    |||||||||||||||||||||||||||||    
T  19247116 ataataccaaaattgcccttttatataaa 19247144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 40499397 - 40499365
Alignment:
Q  122 ataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||| ||||||||||||||||||||    
T  40499397 ataccaaaattgtccttttatataaattttctt 40499365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 45942296 - 45942236
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||| |||||||| |||||||||| ||||||||||||| | | |||| ||||| |||||    
T  45942296 ataatagcaaaattgtccttttatattaattttcttaaaatcttgatttcattcattgtca 45942236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 51001248 - 51001308
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||| |||||||||  ||||||||||||||||||||||| | | |||| ||||| |||||    
T  51001248 ataatcccaaaattgttcttttatataaattttcttaaaatcttgatttcattcattgtca 51001308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 9e-63; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 32541393 - 32541558
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  32541393 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaattttttttataataccaaaattgcccttttatataaattttcttaa 32541492  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32541493 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 32541558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 40704719 - 40704885
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  40704719 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaaattataataccaaaattgcccttttatataaattttcttaa 40704818  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttca-ccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40704819 aaccctaattttattcattgtcagtgagtttcaccctctttcacccccacaaagcgatcgatcaaac 40704885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 46321322 - 46321486
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||| ||  ||||||||||||||||||  ||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  46321322 agagtttttctatttaccccccatgtttttctggttacacacaaattttcttaattttttt-ataataccaaaattgcccttttatataaattttcttaa 46321420  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46321421 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 46321486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 56 - 222
Target Start/End: Complemental strand, 46924727 - 46924560
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    ||||||||||||||||||||| |||||||||||||||| ||  ||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  46924727 aagagtttttctatttacaccctatgtttttctggttatacccaaattttcttaaattatctttataataccaaaattgcccttttatataaattttctt 46924628  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46924627 aaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagtgatcgatcaaac 46924560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 40996011 - 40995845
Alignment:
Q  57 agagtttttctatttacaccatatgttttt-ctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  |||||||| ||||||||||  ||||||||||||        ||||||||||||||| |||||||||||||||||||||    
T  40996011 agagtttttctatttacaccccatgttttttctggttacacccaaattttcttaaaaaaaattataataccaaaattgtccttttatataaattttctta 40995912  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40995911 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 40995845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 7791704 - 7791536
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  ||| ||||||||||||||  ||||||||||||         |||||| ||||||||||||||||||||||||||||    
T  7791704 taagagtttttctatttacaccccatgattttctggttacacccaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttct 7791605  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7791604 taaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 7791536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 21873755 - 21873923
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    |||||| |||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||    
T  21873755 taagagattttctatttacaccccatgtttttctggttacacccaaattttcttaaaacttttttataataccaaaattgcccttttatataaattttct 21873854  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  21873855 taaaaccctaattttattcattgtcggtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 21873923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 27325686 - 27325522
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||        ||||||||||||||| |||||||||||||||||||||||    
T  27325686 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaattttttttataataccaaaattgtccttttatataaattttcttaaa 27325587  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27325586 accataattttattcattgtcagtgagtttcaccctctttcaccccacaaagtgatcgatcaaac 27325522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 56 - 222
Target Start/End: Original strand, 26015098 - 26015264
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||   ||||||||||||||||||  ||||||||||||        |||||||||||||| ||||||||||||||||||||||    
T  26015098 aagagtttttctatttacacgcaatgtttttctggttacacccaaattttcttaattttttttataataccaaaattacccttttatataaattttctta 26015197  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||    
T  26015198 aaaccctaattttattcattgtcagtgagtttcaccctctttcactccacaaagcgatcaatcaaac 26015264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 42094762 - 42094928
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||| ||||||  ||||||| ||||         |||||||||||||||||||||||||||||||||||||    
T  42094762 agagtttttctatttacaccccatgtttttctgattacacccaaatttttttaaaagttttttataataccaaaattgcccttttatataaattttctta 42094861  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42094862 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 42094928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 43246239 - 43246405
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||| |||| |||||||||||||         |||||| |||||||| |||||||||||||||||||||    
T  43246239 agagtttttctatttacaccccatgtttttctggtcacacctaaattttcttaaaaaaattttataatatcaaaattgtccttttatataaattttctta 43246338  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43246339 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 43246405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 47065149 - 47065314
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttctt-aannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  |||||||||| ||        ||||||||||||||||||||||||||||||||||||||    
T  47065149 gagtttttctatttacaccccatgtttttctggttacacccaaattttctttaaaaaaaattataataccaaaattgcccttttatataaattttcttaa 47065248  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  47065249 aaccctaattttattcattgtcagtgagtttcaccctcttttaccccacaaagcgattgatcaaac 47065314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 56 - 222
Target Start/End: Original strand, 8214924 - 8215091
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||  |||||||||| |||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  8214924 aagagtttttctatttacaccccatgtttttctagttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctt 8215023  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8215024 aaaaccttaattttatacattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 8215091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 10533463 - 10533298
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||| |  ||||||||||| |||||   ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  10533463 gagtttttctatttacatcccatgtttttctgattacatccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttaa 10533364  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10533363 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 10533298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 32661582 - 32661747
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||| |||||||||||||||||    
T  32661582 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaaatttataataccaaaattgcccttctatataaattttcttaa 32661681  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    || ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32661682 aagcctaattttgttcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 32661747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 7901289 - 7901123
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn--ataataccaaaattgcccttttatataaattttctta 155  Q
    |||||||||||||||||||  |||||||||||||||||   |||||||||||           |||||| ||||||||||||||||||||||||||||||    
T  7901289 gagtttttctatttacaccccatgtttttctggttacatccaaattttcttatttttttttttataatatcaaaattgcccttttatataaattttctta 7901190  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7901189 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 7901123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 21278264 - 21278415
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  21278264 agagtttttctatttacaccccatgtttttctggttacacctaaattttcttaaaatttttttataataccaaaattgcccttttatataaattttctta 21278363  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  21278364 aaaccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 21278415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 39073652 - 39073818
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  39073652 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctta 39073751  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccc-cacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  39073752 aaaccctaattttattcattgtca-tgagtttcaccctctttcaccctcacaaagcgatcgatcaaac 39073818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 19699842 - 19699678
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  19699842 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaaaattataataccaaaattgcccttttatataaattttcttaa 19699743  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| || ||||||||    
T  19699742 aaccctaattttattcattgtcagtgagtttca-cctctttcaccccacaaagctattgatcaaac 19699678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 58 - 217
Target Start/End: Complemental strand, 35924952 - 35924792
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||| |||||||||||||||||||||||||||||||    
T  35924952 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaattttttttataatatcaaaattgcccttttatataaattttcttaa 35924853  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgat 217  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  35924852 aaccctaattttattcattgtcagtgagtttcaccatctttcaccccacaaaacgatcgat 35924792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 38875359 - 38875524
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||| ||||||  ||||||||||||         |||||| |||||||  ||||||||||||||||||||||    
T  38875359 gagtttttctatttacaccccatgtttttctgattacacccaaattttcttaatttttttttataatatcaaaattatccttttatataaattttcttaa 38875458  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38875459 aaccctaattttattcattgtcagtgaatttcaccctctttcaccccacaaagcgatcgatcaaac 38875524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 203
Target Start/End: Complemental strand, 25877630 - 25877481
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||| |||||||||||||||||||    
T  25877630 taagagtttttctatttacacctcatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgtccttttatataaattttct 25877531  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcacccc 203  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  25877530 taaaaccctaattttattcattgtcactgagtttcaccctctttcacccc 25877481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 56 - 222
Target Start/End: Complemental strand, 34592531 - 34592365
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||    ||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||| |||| ||    
T  34592531 aagagtttttctatttacacccc--gtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataatttttttt 34592434  T
Q  155 -aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34592433 taaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 34592365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 38282930 - 38283078
Alignment:
Q  60 gtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||||||||||||||  |||||| |||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||||    
T  38282930 gtttttctatttacaccccatgtttgtctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaa 38283029  T
Q  159 ccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  38283030 ccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 38283078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 207
Target Start/End: Original strand, 47778767 - 47778917
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  || |||||||||||||||  ||||||||||||         |||||||||||||||  |||||||||||||||||||||    
T  47778767 gagtttttctatttacaccccatatttttctggttacacccaaattttcttaaaagttttttataataccaaaattgtacttttatataaattttcttaa 47778866  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  47778867 aaccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 47778917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 79 - 222
Target Start/End: Original strand, 40994134 - 40994278
Alignment:
Q  79 atgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgt 177  Q
    ||||||||||||||||||  ||||||||||||         ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  40994134 atgtttttctggttacacccaaattttcttaaaaaaaatttataatattaaaattgtccttttatataaattttcttaaaaccctaattttattcattgt 40994233  T
Q  178 cagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    | ||||||||||||||||||||||||||||||||| |||||||||    
T  40994234 cggtgagtttcaccctctttcaccccacaaagcgaacgatcaaac 40994278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 19020518 - 19020601
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccc 202  Q
    ||||||||||||||  | |||||||||||||||||||||||  | |||||||||| ||||| | ||||||||| ||||||||||    
T  19020518 ataataccaaaattttcgttttatataaattttcttaaaacattgattttattcattgtcactcagtttcaccatctttcaccc 19020601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 48642626 - 48642537
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaa 208  Q
    |||||| ||||||||||||||||||||| |||| |||||||| |||| ||||||  |||||  ||| ||||||| ||||||||| |||||    
T  48642626 ataatatcaaaattgcccttttatataattttttttaaaaccttaatcttattccttgtcaccgagattcaccccctttcacccgacaaa 48642537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 20493616 - 20493556
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||| ||||| |||||    
T  20493616 ataataccaaaattgtccttttatataaattttcttaaaatcttaatttcattcattgtca 20493556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 242427 - 242367
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  242427 ataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 242367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 42435677 - 42435737
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| ||||||||||||||||| |||||| | |||||| ||||| |||||    
T  42435677 ataataccaaaattgtccttttatataaatttttttaaaatcttaatttcattcattgtca 42435737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 47541216 - 47541156
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  47541216 ataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 47541156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 39596994 - 39597048
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattca 173  Q
    ||||||||||||||| ||||| |||||||||||||||||| | | ||||||||||    
T  39596994 ataataccaaaattgtcctttcatataaattttcttaaaatcttgattttattca 39597048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 7883141 - 7883178
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  7883141 ataataccaaaattgtccttttatataaattttcttaa 7883178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 40863297 - 40863240
Alignment:
Q  122 ataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  40863297 ataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 40863240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 29042809 - 29042749
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| ||||||||||||||| |||||||| | | |||| ||||| |||||    
T  29042809 ataataccaaaattgtccttttatataaattatcttaaaatcttgatttcattcattgtca 29042749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 41469463 - 41469503
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaac 159  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  41469463 ataatatcaaaattgtccttttatataaattttcttaaaac 41469503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 47011237 - 47011177
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| | |||||||||||||||||||||| | | |||| ||||| |||||    
T  47011237 ataataccaaaattgtctttttatataaattttcttaaaatcttgatttcattcattgtca 47011177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 25226359 - 25226320
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  25226359 ataatatcaaaattgtccttttatataaattttcttaaaa 25226320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 25236191 - 25236152
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  25236191 ataatatcaaaattgtccttttatataaattttcttaaaa 25236152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 30172885 - 30172940
Alignment:
Q  124 accaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  30172885 accaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 30172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 40304841 - 40304880
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  40304841 ataataccgaaattgtccttttatataaattttcttaaaa 40304880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 30121020 - 30121061
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaacc 160  Q
    ||||||||||||||| ||||||||||||||||  ||||||||    
T  30121020 ataataccaaaattgtccttttatataaatttctttaaaacc 30121061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 12846703 - 12846763
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||| |||||||| ||||||||||||||||| |||||| | | |||| ||||| |||||    
T  12846703 ataatatcaaaattgtccttttatataaatttttttaaaatcttgatttcattcattgtca 12846763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 37545011 - 37544971
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaac 159  Q
    |||||| |||||||| |||||||||||||||||||| ||||    
T  37545011 ataatatcaaaattgtccttttatataaattttcttcaaac 37544971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 43829521 - 43829685
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  43829521 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaatttttttataataccaaaattgcccttttatataaattttcttaaa 43829620  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43829621 accctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 43829685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 20738569 - 20738404
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||| ||||        ||||||||||||||||||||||||||||||||||||||    
T  20738569 agagtttttctatttacaccccatgtttttctggttacacccaaatttttttaaaagtttttataataccaaaattgcccttttatataaattttcttaa 20738470  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20738469 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 20738404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 55220692 - 55220524
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||    
T  55220692 taagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttct 55220593  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  55220592 taaaaccctaattttattcattgtgagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 55220524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 46563747 - 46563914
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||   ||||||||||||||||||  ||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  46563747 taagagtttttctatttacactccatgtttttctggttacacccaaattttcttaaatttttttataatatcaaaattgcccttttatataaattttctt 46563846  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46563847 aaaaccctaattttattcattgtcagtgagtttcaccctctttcacctcacaaagcgatcgatcaaac 46563914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 57 - 220
Target Start/End: Complemental strand, 614651 - 614489
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||  |||||||||| |||||||  ||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  614651 agagtttttctatttacaccccatgtttttctagttacacccaaattttcttaattttttt-ataataccaaaattgcccttttatataaattttcttaa 614553  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaa 220  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  614552 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaa 614489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 55214868 - 55215034
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  55214868 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttctta 55214967  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  55214968 aaaccctaattttattcattgtgagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 55215034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 56363528 - 56363360
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  ||||||||||| ||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||    
T  56363528 taagagtttttctatttacaccccatgtttttctgattacacccaaattttcttaaaaactttttataataccaaaattgcccttttatataaattttct 56363429  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  56363428 taaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcaatcgatcaaac 56363360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 53 - 222
Target Start/End: Complemental strand, 20434939 - 20434769
Alignment:
Q  53 tgtaagagtttttctatttacaccatatgtttttctggttacacttaaattttctt-aannnnnnnnataataccaaaattgcccttttatataaatttt 151  Q
    |||| |||||||||||||||||||  ||||||||||||||||||  |||||||||| ||        |||||||||||||||||||||||||||||||||    
T  20434939 tgtatgagtttttctatttacaccccatgtttttctggttacacccaaattttctttaaaaaaaattataataccaaaattgcccttttatataaatttt 20434840  T
Q  152 cttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  20434839 cttaaaaccctaattttattcattgtcagtgagtttcaccctcttttaccccacaaagcgattgatcaaac 20434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 42723406 - 42723572
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||| |||||||||||||    
T  42723406 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaaaattataataccaaaattgcccttttacataaattttctta 42723505  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42723506 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgattgatcaaac 42723572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 42349522 - 42349357
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  || |||||||||||||||  ||||||||||||         ||||||||||||||| ||||||||||||||||||||||    
T  42349522 gagtttttctatttacaccccatatttttctggttacacccaaattttcttaaaaaaaatttataataccaaaattgtccttttatataaattttcttaa 42349423  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42349422 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 42349357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 19873350 - 19873518
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  |||||||||||||| |||  ||||||||||||         |||||||||||||||||||||||||||||||||||    
T  19873350 taagagtttttctatttacaccccatgtttttctggttgcacccaaattttcttaaaaaaaaattataataccaaaattgcccttttatataaattttct 19873449  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  19873450 taaaaccctaattttattcattgtcagtgagtttcaccctcttttaccccacaaagcgattgatcaaac 19873518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 39539734 - 39539898
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||| ||||||||||||  ||||||||||||||||||  ||||||||||||        | |||||||||||| ||||||||||||||||||||||||    
T  39539734 gagtttctctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaaattacaataccaaaattacccttttatataaattttcttaaa 39539833  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  39539834 accctaattttattcattgtcagtgagtttcaccctctttcactccacaaagcgatcgatcaaac 39539898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 52912423 - 52912591
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttctt-aannnnnnnnataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  ||||||||||||||||||  |||||||||| ||        |||||| ||||||||||||||||||||||||||||    
T  52912423 taagagtttttctatttacaccccatgtttttctggttacacccaaattttctttaaaaaaatttataatatcaaaattgcccttttatataaattttct 52912522  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  52912523 taaaaccctaattttattcattgtcagtgagtttcgccctctttcaccccataaagcgatcgatcaaac 52912591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 38291157 - 38291323
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn--ataataccaaaattgcccttttatataaattttctta 155  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||| ||||          ||||||| |||||||||||||||||||||||||||||    
T  38291157 gagtttttctatttacaccccatgtttttctggttacacccaaatttttttaaatttttttttataatactaaaattgcccttttatataaattttctta 38291256  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38291257 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 38291323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 37233438 - 37233604
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||         ||||||||||||||| ||||||||||||||||||||||    
T  37233438 gagtttttctatttacaccccatgtttttctggttacacctaaattttcttaaaatttttttataataccaaaattgtccttttatataaattttcttaa 37233537  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttca-ccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  37233538 aaccctaattttattcattgtcagtgagttttaccctctttcacccccacaaagcgatcgatcaaac 37233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 56017714 - 56017879
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||||||||||||   ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  56017714 gagtttttctatttacaccccatgtttttctggttacatccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaa 56017813  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  56017814 aaccttaattttattcattgccagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 56017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 1356316 - 1356468
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||  |||||||| |||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  1356316 aagagtttttctatttacaccccatgtttttttggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctt 1356415  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  1356416 aaaaccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 1356468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 55182793 - 55182958
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||| ||||||||   ||||||||||||         ||||||  ||||||||||||||||||||||||||||||    
T  55182793 gagtttttctatttacaccccatgtttttttggttacatccaaattttcttaaattttttttataatattaaaattgcccttttatataaattttcttaa 55182892  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  55182893 aatcctaattttattcattgtcagtgagtttcaccctctttcaccccacaaaacgatcgatcaaac 55182958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 56 - 222
Target Start/End: Original strand, 23894459 - 23894626
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||  |||||||||| |||||||   |||||||||||         |||||| |||||||| ||||||||||||||||| ||    
T  23894459 aagagtttttctatttacaccccatgtttttctagttacacccgaattttcttaaaatttttttataatatcaaaattgtccttttatataaattttatt 23894558  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  23894559 aaaaccttaattttattcattgtcagtgagtttcaccctctttcaccccataaagcgatcgatcaaac 23894626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 52839050 - 52839153
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| ||||    
T  52839050 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtcagtgagtttcaccctctttcatcccacaaaccgattgatc 52839149  T
Q  219 aaac 222  Q
    ||||    
T  52839150 aaac 52839153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 53874310 - 53874475
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttctt-aannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||| ||||  ||||||||||||||||||  ||||||| || ||        |||||| |||||||||||||||||||||||||||||||    
T  53874310 gagtttttctatttccaccccatgtttttctggttacacccaaattttttttaaaaaaatttataatatcaaaattgcccttttatataaattttcttaa 53874409  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||  |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  53874410 aactttaattttattcattgtcagtgagttttaccctctttcaccccataaagcgatcgatcaaac 53874475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 207
Target Start/End: Original strand, 10541383 - 10541531
Alignment:
Q  61 tttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgccctttt-atataaattttcttaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||| ||||||||||||||||||    
T  10541383 tttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgccctttttatataaattttcttaaaa 10541482  T
Q  159 ccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  10541483 ccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 10541531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 28405712 - 28405877
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||||||||||||   ||||||||||||         ||||||||||||||||||||||||||| |     ||||    
T  28405712 gagtttttctatttacaccccatgtttttctggttacatccaaattttcttaaaatttttttataataccaaaattgcccttttatatataaaaatttaa 28405811  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28405812 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatggatcaaac 28405877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 56 - 191
Target Start/End: Complemental strand, 5098853 - 5098717
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         | |||||||||||||| |||||||||||||||||||    
T  5098853 aagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaattttaaaataccaaaattgcacttttatataaattttctt 5098754  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcacc 191  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5098753 aaaaccctaattttattcattgtcagtgagtttcacc 5098717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 31710618 - 31710524
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttctt-aannnnnnnnataataccaaaattgcccttttatataaatttt 151  Q
    |||||||||||||||||||  ||||||||||||||||||  |||||||||| ||        |||||||||||||||||||||||||| ||||||    
T  31710618 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaattttttttataataccaaaattgcccttttatattaatttt 31710524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 25858401 - 25858353
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattt 167  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  25858401 ataatactaaaattgcccttttatataaattttcttaaaactctaattt 25858353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 32136276 - 32136216
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||| ||||| |||||    
T  32136276 ataataccaaaattgcccttttatataaattttcttaaaatctttatttcattcattgtca 32136216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 7795338 - 7795285
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattc 172  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||||| ||||    
T  7795338 ataataccaaaactgccttttcatataaattttcttaaaaccctaatttcattc 7795285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 3025542 - 3025602
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  3025542 ataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 3025602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 8714020 - 8713960
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  8714020 ataataccaaaattgtccttttatataaattttcttaaaatctttatttcattcattgtca 8713960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 15506603 - 15506563
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaac 159  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  15506603 ataatacaaaaattgcccttttatataaattttcttaaaac 15506563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 35338867 - 35338927
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||| ||| |||||||||||||||||||||||| | |||||| ||||| |||||    
T  35338867 ataataccaaatttgtccttttatataaattttcttaaaatcttaatttcattcattgtca 35338927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 37829856 - 37829756
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    ||||||||||||| ||||| ||| | |||||||||||||| |  |||| | ||        ||||||||||||||| |||||||||||||||||||||||    
T  37829856 gagtttttctattcacaccctatatatttctggttacactcagtttttttaaaagtttttgataataccaaaattgtccttttatataaattttcttaaa 37829757  T
Q  158 a 158  Q
    |    
T  37829756 a 37829756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 43457531 - 43457591
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | || ||| ||||| |||||    
T  43457531 ataataccaaaattgtccttttatataaattttcttaaaatcttattttcattcattgtca 43457591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 24035390 - 24035351
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  24035390 ataataccaaaattgtccttttatataaattttcttaaaa 24035351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 51320635 - 51320674
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  51320635 ataataccaaaattgtccttttatataaattttcttaaaa 51320674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 25858352 - 25858319
Alignment:
Q  189 accctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||||||||||||||||||    
T  25858352 accctctttcaccccacaaagcgatcgatcaaac 25858319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 7818475 - 7818427
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattt 167  Q
    |||||||||||| | || |||||||||||||||||||||||||| ||||    
T  7818475 ataataccaaaacttccattttatataaattttcttaaaaccctgattt 7818427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 13961610 - 13961646
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13961610 ataataccaaaattgtccttttatataaattttctta 13961646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 1536986 - 1536927
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtc 178  Q
    ||||||| |||  |||| |||||||||||||||||||||||| |||||| ||||| ||||    
T  1536986 ataatactaaatctgcctttttatataaattttcttaaaaccttaatttcattcattgtc 1536927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 10480553 - 10480592
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  10480553 ataatactaaaattgtccttttatataaattttcttaaaa 10480592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 11691754 - 11691715
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  11691754 ataataccaaaattgtctttttatataaattttcttaaaa 11691715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 20292551 - 20292590
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  20292551 ataataccaaaattatccttttatataaattttcttaaaa 20292590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 24897711 - 24897676
Alignment:
Q  121 aataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||||||||||| ||||||    
T  24897711 aataccaaaattgcccttttatataaattatcttaa 24897676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 32933550 - 32933511
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  32933550 ataatacaaaaattgtccttttatataaattttcttaaaa 32933511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 34160255 - 34160216
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  34160255 ataataccaaaattgtcctttaatataaattttcttaaaa 34160216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 37682534 - 37682573
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  37682534 ataatatcaaaattgtccttttatataaattttcttaaaa 37682573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 1523723 - 1523663
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||  ||| |||||||||||||||||||| | | |||| ||||| |||||    
T  1523723 ataataccaaaattatcctcttatataaattttcttaaaatcttgatttcattcattgtca 1523663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 3027372 - 3027312
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| | ||||||||||||||| |||||| | | |||| ||||| |||||    
T  3027372 ataataccaaaattgtctttttatataaatttttttaaaatcttgatttcattcattgtca 3027312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 30215033 - 30215093
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||| |||||||  |||||||||||||||||||||||| | | |||| ||||| |||||    
T  30215033 ataatatcaaaattatccttttatataaattttcttaaaatcttgatttcattcattgtca 30215093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 50469920 - 50469864
Alignment:
Q  123 taccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||| ||||||| |||||||||||||||| | | |||| ||||| |||||    
T  50469920 taccaaaattgtccttttacataaattttcttaaaatcttgatttcattcattgtca 50469864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 51323415 - 51323355
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||| |||||||| | |||||||||||||||||||||| | | |||| ||||| |||||    
T  51323415 ataatatcaaaattgtcattttatataaattttcttaaaatcttgatttcattcattgtca 51323355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 2e-60; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 33711948 - 33712113
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||| |||||||||||||||||||  ||||||||||||        |||||||||||||||||||||||||||||| |||||||    
T  33711948 agagtttttctatttacaccctatgtttttctggttacacccaaattttcttaaatttttttataataccaaaattgcccttttatataaatattcttaa 33712047  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33712048 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagtgatcgatcaaac 33712113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 37970938 - 37971103
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  37970938 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttaa 37971037  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37971038 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 37971103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 4515271 - 4515435
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||        ||||||||||||||||||||| ||||||||||||||||    
T  4515271 agagtttttctatttacaccccatgtttttctggttacacctaaattttcttaattttttttataataccaaaattgcccttt-atataaattttcttaa 4515369  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  4515370 aaccctaattttattcattgtcagtgagtttcaccctcttttaccccacaaagcgattgatcaaac 4515435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 22781074 - 22781239
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||| |||||||||||||||||||||    
T  22781074 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaattttttttataataccaaaattgctcttttatataaattttcttaa 22781173  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22781174 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 22781239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 33967741 - 33967576
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  33967741 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaaaattataataccaaaattgcccttttatataaattttcttaa 33967642  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33967641 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgattgatcaaac 33967576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 56 - 222
Target Start/End: Original strand, 10840657 - 10840824
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||  |||||||| |||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  10840657 aagagtttttctatttacaccccatgtttttttggttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttctt 10840756  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10840757 aaaaccctaattttattcattgtcagtgaatttcaccctctttcaccccacaaagcgatcgatcaaac 10840824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 41070707 - 41070541
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  |||||||| |||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  41070707 agagtttttctatttacaccccatgtttttttggttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttctta 41070608  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41070607 aaaccctaattttattcattgtcagtgaatttcaccctctttcaccccacaaagcgatcgatcaaac 41070541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 20834776 - 20834941
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||| |||   ||        |||||| |||||||||||||||||||||||||||||||    
T  20834776 agagtttttctatttacaccccatgtttttctggttacacccaaacttttaaaaaaaaaattataatatcaaaattgcccttttatataaattttcttaa 20834875  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20834876 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 20834941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 36431138 - 36430973
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||| |||||||||  ||||||||||||         ||||||||||||||| ||||||||||||||||||||||    
T  36431138 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaaattttttttataataccaaaattgtccttttatataaattttcttaa 36431039  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36431038 aaccctaattttattcattgtcagtgaatttcaccctctttcaccccacaaagcgatcgatcaaac 36430973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 25711753 - 25711585
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||| ||||||||||  || |||||||||||||||  ||||||||||||         |||||||||||||| || |||||||||||||||||    
T  25711753 taagagtttttttatttacaccccatatttttctggttacacccaaattttcttaaaatttttttataataccaaaattacctttttatataaattttct 25711654  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25711653 taaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 25711585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 32237122 - 32236957
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||| |||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  32237122 gagtttttctatttacaccccatgtttgtctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaa 32237023  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  32237022 aaccctacttttattcattgtcagtgagtttcaccctctttcacccctcaaaacgatcgatcaaac 32236957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 38871947 - 38871782
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  || ||||| ||||||||   ||||||||||||         |||||| |||||||||||||||||||||||||||||||    
T  38871947 gagtttttctatttacaccccatatttttttggttacatccaaattttcttaaaaaatttttataatatcaaaattgcccttttatataaattttcttaa 38871848  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38871847 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 38871782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 7149232 - 7149399
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  7149232 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaa 7149331  T
Q  157 aaccctaattttattcactgtcagtgagtttcacc--ctctttca-ccccacaaagcgatcgatcaaa 221  Q
    ||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||| ||||||||||    
T  7149332 aaccctaattttattcattgtcagtgagtttcaccctctctttcacccccacaaagccatcgatcaaa 7149399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 4044042 - 4044207
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||| |||| ||||    
T  4044042 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataattttttttaa 4044141  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||| || ||  |||||||||||||||||||||||||||||| |||||||||||||    
T  4044142 aaccctaattttatccattggtagtgagtttcaccctctttcaccccacaaaacgatcgatcaaac 4044207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 20656519 - 20656684
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||| |||||||| ||||||||||||||||||||||    
T  20656519 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataatatcaaaattgtccttttatataaattttcttaa 20656618  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||  |||||||||||    
T  20656619 aaccctacttttattcattgtcagtgagtttcaccctctttcacccctcaaagaaatcgatcaaac 20656684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 24396025 - 24395856
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctg-gttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttc 152  Q
    ||||||||||||||||||||||  |||||||| |  |||||||  ||||||||||||         |||||||||||||||||||| |||||||||||||    
T  24396025 taagagtttttctatttacaccccatgtttttttttgttacacccaaattttcttaaaagttttttataataccaaaattgcccttatatataaattttc 24395926  T
Q  153 ttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  24395925 ttaaaaccctaattttattcattgacagtgagtttcaccctctttcaccccacaaagtgatcgatcaaac 24395856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 20049133 - 20048981
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||  || |||||||||||||||  ||||||||||||         |||||||||||||||  |||||||||||||||||||    
T  20049133 aagagtttttctatttacaccccatatttttctggttacacccaaattttcttaaaagttttttataataccaaaattgttcttttatataaattttctt 20049034  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  20049033 aaaaccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 20048981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 207
Target Start/End: Complemental strand, 672883 - 672740
Alignment:
Q  61 tttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaaaac 159  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  672883 tttttctatttacaccccatgtttttctggttacacctaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaac 672784  T
Q  160 cctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    |||||||||||||| |    ||||||||||||||||||||||||||||    
T  672783 cctaattttattcatt----gtgagtttcaccctctttcaccccacaa 672740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 53975092 - 53974959
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||||||  |||||||||||||||||   ||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  53975092 gagtttttctatttacaccccatgtttttctggttacatccaaattttcttaattttttt-ataataccaaaattgcccttttatataaattttcttaaa 53974994  T
Q  158 accctaattttattcactgtcagtgagtttcaccc 192  Q
    |||||||||||||||| ||||||||||||||||||    
T  53974993 accctaattttattcattgtcagtgagtttcaccc 53974959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 10999013 - 10999166
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn---ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||| |||||| |||  ||||||||||||||||||  ||||||||||||           |||||||||||||||||||||||| ||||||||||    
T  10999013 agagtttttttatttataccccatgtttttctggttacacccaaattttcttaaaagttttttttataataccaaaattgcccttttatgtaaattttct 10999112  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  10999113 taaaaccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 10999166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 58 - 207
Target Start/End: Original strand, 40585389 - 40585538
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||| ||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||| | ||||||||||||||||||||    
T  40585389 gagtttttttatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgtc-ttttatataaattttcttaa 40585487  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  40585488 aaccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 40585538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 207
Target Start/End: Complemental strand, 26091165 - 26091022
Alignment:
Q  61 tttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaaaac 159  Q
    ||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||| |||||||||||||||||||||||||    
T  26091165 tttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgtccttttatataaattttcttaaaac 26091066  T
Q  160 cctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    | |||||||||||| |    ||||||||||||||||||||||||||||    
T  26091065 cttaattttattcatt----gtgagtttcaccctctttcaccccacaa 26091022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 85457 - 85339
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    ||||||||||||||| |||||  ||||||||||||||||||  ||||||||||||         |||||| |||||||||||||||||||||||||||||    
T  85457 aagagtttttctattcacaccccatgtttttctggttacacccaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttctt 85358  T
Q  155 aaaaccctaattttattca 173  Q
    |||||||||||||||||||    
T  85357 aaaaccctaattttattca 85339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 6267630 - 6267703
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccc 192  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6267630 ataatactaaaattgccattttatataaattttcttaaaaccctaattttattcattgtcagtgagtttcaccc 6267703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 7678653 - 7678769
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||| |||||  |||||||| |||||||||  ||||||||||||         |||||| |||||||||||||||||||||||||||||||    
T  7678653 gagtttttctattcacaccccatgtttttttggttacacccaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttcttaa 7678752  T
Q  157 aaccctaattttattca 173  Q
    |||||||||||||||||    
T  7678753 aaccctaattttattca 7678769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 54557007 - 54556924
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccc 202  Q
    |||||| |||||||| |||||||||||||||||||||||| | | |||||||| | ||||| ||||||| ||||||||||||||    
T  54557007 ataatatcaaaattgtccttttatataaattttcttaaaatcttgattttatttattgtcactgagttttaccctctttcaccc 54556924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 8947127 - 8947199
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcacc 191  Q
    ||||||||| ||||||| ||||||||||||||| |||||||| | |||||||||| ||||| |||||||||||    
T  8947127 ataataccacaattgcctttttatataaatttttttaaaaccttgattttattcattgtcactgagtttcacc 8947199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 24200374 - 24200320
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattca 173  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||| |||||    
T  24200374 ataataccaaaattgtccttttatataaattttcttaaaatcttaatttcattca 24200320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 38144404 - 38144443
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  38144404 ataataccaaaattgtccttttatataaattttcttaaaa 38144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 48585550 - 48585511
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  48585550 ataataccaaaattgtccttttatataaattttcttaaaa 48585511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 49779027 - 49779066
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  49779027 ataataccaaaattgtccttttatataaattttcttaaaa 49779066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 39626156 - 39626246
Alignment:
Q  119 ataataccaaaattgccctttt-atataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaa 208  Q
    |||||||||||||| || |||| ||||||| ||| |||||||  |||| ||||||| ||||| |||| |||||||||||||| | ||||||    
T  39626156 ataataccaaaattaccttttttatataaaattttttaaaactttaatcttattcattgtcattgagcttcaccctctttcatcacacaaa 39626246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 52343696 - 52343639
Alignment:
Q  122 ataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  52343696 ataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 52343639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 4595711 - 4595771
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||  |||||||||||||||||||||||| | | |||| ||||| |||||    
T  4595711 ataataccaaaattttccttttatataaattttcttaaaatcttgatttcattcattgtca 4595771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 41589605 - 41589573
Alignment:
Q  119 ataataccaaaattgcccttttatataaatttt 151  Q
    |||||||||||||||||||||||||||||||||    
T  41589605 ataataccaaaattgcccttttatataaatttt 41589573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 47097559 - 47097599
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaac 159  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  47097559 ataatatcaaaattgtccttttatataaattttcttaaaac 47097599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 52813853 - 52813814
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  52813853 ataataccaaaactgtccttttatataaattttcttaaaa 52813814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 11124545 - 11124513
Alignment:
Q  119 ataataccaaaattgcccttttatataaatttt 151  Q
    ||||||||||||||| |||||||||||||||||    
T  11124545 ataataccaaaattgtccttttatataaatttt 11124513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 23483340 - 23483288
Alignment:
Q  127 aaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||||  ||||||||||||||||||||||||| | |||| ||||| |||||    
T  23483340 aaaattgttcttttatataaattttcttaaaaccttgatttcattcattgtca 23483288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 28412172 - 28412112
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||| |||||| |||| | | |||| ||||| |||||    
T  28412172 ataataccaaaattgtccttttatataacttttctgaaaatcttgatttaattcattgtca 28412112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 6167246 - 6167413
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttctt 154  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||        ||||||| ||||||||||||||||||||||||||||    
T  6167246 taagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaattttttttataatacaaaaattgcccttttatataaattttctt 6167345  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6167346 aaaaccctagttttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 6167413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 13889307 - 13889472
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||||||  |||||||||| |||||||  ||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  13889307 gagtttttctatttacaccccatgtttttctagttacacccaaattttcttaaatttttttataataccaaaattgcccttttatataaattttcttaaa 13889406  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttca-ccccacaaagcgatcgatcaaac 222  Q
    | |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13889407 atcctaattttattcattgtcagtgagtttcaccctctttcacccccacaaagcgatcgatcaaac 13889472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 18894567 - 18894401
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  18894567 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaattttataatatcaaaattgcccttttatataaattttctta 18894468  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  18894467 aaatcctaattttattcattgtcagtgagtttcaccctctttcaccccataaagcgatcgatcaaac 18894401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 56 - 222
Target Start/End: Complemental strand, 7142037 - 7141870
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||| ||||||| |||||||||||| ||||||||    
T  7142037 aagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaaaatttataatatcaaaattacccttttatatatattttctt 7141938  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  7141937 aaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccataaagcgatcgatcaaac 7141870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 25332149 - 25332315
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||  |||||||||||||||||||||||||||||    
T  25332149 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaaaatatttataataaaaaaattgcccttttatataaattttctta 25332248  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  25332249 aaaccctaattttattcattgtcagtgagtttcaccctcttttaccccacaaagcgatctatcaaac 25332315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 55 - 220
Target Start/End: Original strand, 29121627 - 29121791
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttctt 154  Q
    ||||||||||||||||||||||  ||||||| ||||||||||  ||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  29121627 taagagtttttctatttacaccccatgtttt-ctggttacacccaaatttttttaattttttttataataccaaaattgcccttttatataaattttctt 29121725  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaa 220  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||    
T  29121726 aaaaccctaattttattcattgtcagtgagtttcatcatctttcatcccacaaagcgatcgatcaa 29121791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 6626156 - 6625990
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    |||||||||||||||||| |  ||||||||||||||||||  ||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  6626156 agagtttttctatttacaacccatgtttttctggttacacccaaattttcttaaattttttttataatatcaaaattgcccttttatataaattttctta 6626057  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6626056 aaaccttaattttattcattgtcagtgagtttcaccctctttcactccataaagcgatcgatcaaac 6625990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 25331773 - 25331634
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||||||||||||   ||||||||||||         |||||| |||||||||||||||||||||||||||||||    
T  25331773 gagtttttctatttacaccc-atgtttttctggttacatccaaattttcttaaaaaaaatttataatatcaaaattgcccttttatataaattttcttaa 25331675  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctcttt 197  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  25331674 aaccctaattttattcattgtcagtgagtttcaccctcttt 25331634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 3095368 - 3095219
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||| ||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||| ||||| ||||||||||||||||    
T  3095368 gagtttttttatttacaccccatgtttttctggttacacccaaattttcttaaaatttttttataataccaaaattgtccttt-atataaattttcttaa 3095270  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    || |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  3095269 aatcctaattttattcattgtcactgagtttcaccctctttcaccccacaa 3095219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 207
Target Start/End: Original strand, 29629824 - 29629912
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  29629824 ataataccaaaattgacattttatataaattttcttaaaaccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 29629912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 29623920 - 29623980
Alignment:
Q  50 aaatgtaagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaa 110  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||  ||||||||||||    
T  29623920 aaatgtatgagtttttctatttacaccccatgtttttctggttacacccaaattttcttaa 29623980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 8526071 - 8526011
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| ||||||||||||||||||||||||   |||||| ||||| |||||    
T  8526071 ataataccaaaattgtccttttatataaattttcttaaaatattaatttcattcattgtca 8526011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 18024954 - 18024894
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||||||||||||||||||||||||| |||| |||||| | | |||| |||||||||||    
T  18024954 ataataccaaaattgcccttttatataagtttttttaaaatcttgatttcattcactgtca 18024894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 31090506 - 31090566
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  31090506 ataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 31090566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 29880686 - 29880725
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  29880686 ataataccaaaattgtccttttatataaattttcttaaaa 29880725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 5715704 - 5715644
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| | |||||||||||||||||||||| | | |||| ||||| |||||    
T  5715704 ataataccaaaattgtctttttatataaattttcttaaaatcttgatttcattcattgtca 5715644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 29622635 - 29622695
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||| |||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  29622635 ataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 29622695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 11368094 - 11368133
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  11368094 ataatatcaaaattgtccttttatataaattttcttaaaa 11368133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 12602293 - 12602333
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaac 159  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  12602293 ataataccaaaattacccattcatataaattttcttaaaac 12602333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 21658744 - 21658577
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttctt 154  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||        |||||||||||||||||||||||||||| |||||||    
T  21658744 taagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaatttttttataataccaaaattgcccttttatataatttttctt 21658645  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21658644 aaaaccctaattttattcattgtcagtgagtttcaccctctttcaccacacaaagcgatcgatcaaac 21658577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 35896578 - 35896412
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  35896578 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctta 35896479  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35896478 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 35896412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 2389931 - 2390096
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||        |||||||||||||||||||||||||||| |||||||||    
T  2389931 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaatttttttataataccaaaattgcccttttatataatttttcttaa 2390030  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2390031 aaccctaattttattcattgtcagtgagtttcaccctctttcaccacacaaagcgatcgatcaaac 2390096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 25852647 - 25852815
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||    
T  25852647 taagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttct 25852746  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  25852747 taaaaccctaattttattcattgtcagtgagtttcactctctttcaccccacaaagcgatcgatcaaac 25852815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 42343782 - 42343618
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||| |||||||||||||||||||  ||||||||||||        |||||||||||||||||||||||||| | |||||||||    
T  42343782 agagtttttctatttacaccttatgtttttctggttacacccaaattttcttaattttttt-ataataccaaaattgcccttttatatcatttttcttaa 42343684  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42343683 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 42343618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 44144235 - 44144066
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn--ataataccaaaattgcccttttatataaattttc 152  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||          ||||||||||||||||||||||||||||||||||    
T  44144235 taagagtttttctatttacaccccatgtttttctggttacacctaaattttcttaaatttttttttataataccaaaattgcccttttatataaattttc 44144136  T
Q  153 ttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  44144135 ttaaaaccctaattttattcattgtcaatgagtttcaccctctttcaccccacaaggcgatcgatcaaac 44144066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 13195451 - 13195616
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||| ||||||||||  |||||||||||||||||| |||||||||||||         |||||||||||||| |||||||||||||||||||||||    
T  13195451 gagtttttttatttacaccccatgtttttctggttacacctaaattttcttaatttttttttataataccaaaatttcccttttatataaattttcttaa 13195550  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13195551 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 13195616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 34203126 - 34202961
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||        ||||||| |||||| |||||||||||||||||||||||    
T  34203126 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaattttttttataatactaaaatttcccttttatataaattttcttaa 34203027  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34203026 aaccctaattttattcattgtcagtgagtttcaccctctttcatcccacaaagcgatcgatcaaac 34202961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 43577754 - 43577589
Alignment:
Q  58 gagtttttctatttacaccatatgtttttct-ggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  || ||||||| ||||||||  ||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  43577754 gagtttttctatttacaccccatatttttcttggttacacccaaattttcttaattttttttataataccaaaattgcccttttatataaattttcttaa 43577655  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43577654 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 43577589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 927819 - 927655
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  927819 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaattttttttataataccaaaattgcccttttatataaattttcttaaa 927720  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  927719 accctaattttattcattgtcaatgagtttcaccctcttttaccccacaaagcgatctatcaaac 927655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 32550872 - 32551040
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  || |||||||||||||||  ||||||||||||         ||||||||||||||||| |||||||||||||||||    
T  32550872 taagagtttttctatttacaccccatatttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcctttttatataaattttct 32550971  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32550972 taaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 32551040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 37094886 - 37094720
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    |||||||||||||||| |||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  37094886 agagtttttctatttataccccatgtttttctggttacacccaaattttcttaaatttgttttataataccaaaattgcccttttatataaattttctta 37094787  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37094786 aaaccttaattttattcattgtcagtgagtttcaccctcttttaccccacaaagcgatcgatcaaac 37094720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 3179062 - 3178897
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||||||||||||   ||||||| ||||         ||||||||||||||||||||||||||||||||||||||    
T  3179062 gagtttttctatttacaccccatgtttttctggttacatccaaattttattaatttttttttataataccaaaattgcccttttatataaattttcttaa 3178963  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  3178962 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaaacgatcgatcaaac 3178897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 40810987 - 40811151
Alignment:
Q  59 agtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||| |  |||||||||||||||||   ||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  40810987 agtttttctatttacaacccatgtttttctggttacatccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttaaa 40811086  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40811087 accataattttatttattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 40811151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 56 - 222
Target Start/End: Complemental strand, 1482690 - 1482523
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||  || ||||| | |||||||  ||||||||||||         |||||| ||||||| |||||||||||||||||||||    
T  1482690 aagagtttttctatttacaccccatatttttttagttacacccaaattttcttaatttttttttataatatcaaaattacccttttatataaattttctt 1482591  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1482590 aaaaccctaattttattcattgtcagtgaatttcaccctctttcaccccacaaagcgatcgatcaaac 1482523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 1521028 - 1520878
Alignment:
Q  70 ttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaaaaccctaatttt 168  Q
    |||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1521028 ttacaccccatgtttttctggttacacccaaattttcttaaattttttttataataccaaaattgtccttttatataaattttcttaaaaccctaatttt 1520929  T
Q  169 attcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatca 219  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  1520928 attcattgttagtgagtttcaccctctttcaccccacaaagcgatcgatca 1520878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 39697075 - 39697241
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  || ||||||||||||||   ||||||||||||         ||||||||||||||| | |||||||||||||||||||    
T  39697075 agagtttttctatttacacctcatatttttctggttacatccaaattttcttaaattttttttataataccaaaattgtcattttatataaattttctta 39697174  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| |||||||    
T  39697175 aaaccctaattttattcattgtcggtgagttttaccctctttcaccccacaaagcgatcaatcaaac 39697241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 10639558 - 10639409
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||   |||||||||||||||||  |||||||||||||         ||||||||||||||| ||||||||||||||||||||||    
T  10639558 gagtttttctatttacactccatgtttttctggttacatctaaattttcttaaaagttttttataataccaaaattgtccttttatataaattttcttaa 10639459  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  10639458 aaccctaattttattcattgtcactgagtttcaccctc-ttcaccccacaa 10639409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 15012613 - 15012492
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||        ||||||| |||||||||||||||||||||||||||||||    
T  15012613 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaattttttttataatacgaaaattgcccttttatataaattttcttaaa 15012514  T
Q  158 accctaattttattcactgtca 179  Q
    |||||||||||||||| |||||    
T  15012513 accctaattttattcattgtca 15012492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 31639767 - 31639827
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||| ||||| |||||    
T  31639767 ataataccaaaattgcccttttatataaattttcttaaaatcttgatttcattcattgtca 31639827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 27980312 - 27980367
Alignment:
Q  167 ttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  27980312 ttattcattctcagtgagtttcaccctctttcatcccacaaagcgatggatcaaac 27980367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 28066842 - 28066897
Alignment:
Q  167 ttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  28066842 ttattcattctcagtgagtttcaccctctttcatcccacaaagcgatggatcaaac 28066897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 44799567 - 44799465
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataa-taccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  || | |||||||||||||  ||||||||||||        | || ||||||||||||||||||||||||||| |||    
T  44799567 taagagtttttctatttacaccccatatatttctggttacacccaaattttcttaaaagtttttaaaaataccaaaattgcccttttatataaattatct 44799468  T
Q  154 taa 156  Q
    |||    
T  44799467 taa 44799465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 4072626 - 4072665
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  4072626 ataataccaaaattgtccttttatataaattttcttaaaa 4072665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 4330766 - 4330805
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  4330766 ataataccaaaattgtccttttatataaattttcttaaaa 4330805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 38628301 - 38628340
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  38628301 ataataccaaaattgtccttttatataaattttcttaaaa 38628340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 44456078 - 44456117
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  44456078 ataataccaaaattgtccttttatataaattttcttaaaa 44456117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 8033997 - 8034057
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| | ||||||| |||||||||||||| | | |||| |||||||||||    
T  8033997 ataataccaaaattgtcattttatagaaattttcttaaaatcttgatttcattcactgtca 8034057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 13479702 - 13479762
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||  |||||||||||||||||||||||| | | |||| ||||| |||||    
T  13479702 ataataccaaaattatccttttatataaattttcttaaaatcttgatttcattcattgtca 13479762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 7721774 - 7721813
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  7721774 ataataccaaaattgtcattttatataaattttcttaaaa 7721813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 10554204 - 10554239
Alignment:
Q  121 aataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||||||||||| ||||||    
T  10554204 aataccaaaattgcccttttatataaattatcttaa 10554239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 40658543 - 40658582
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  40658543 ataatatcaaaattgcccttttatataaattttcgtaaaa 40658582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 45442895 - 45442930
Alignment:
Q  121 aataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||||||||||| ||||||    
T  45442895 aataccaaaattgcccttttatataaattatcttaa 45442930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 932107 - 932148
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaacc 160  Q
    ||||||||||||||| ||||||||||||||||| || |||||    
T  932107 ataataccaaaattgtccttttatataaatttttttgaaacc 932148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 38628236 - 38628277
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacac 96  Q
    |||||||||||||||| ||||||||| | |||||||||||||    
T  38628236 taagagtttttctattcacaccatatatatttctggttacac 38628277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 10522470 - 10522410
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||  ||||||| |||||||||||||||| | | |||| ||||| |||||    
T  10522470 ataataccaaaattatccttttaaataaattttcttaaaatcttgatttcattcattgtca 10522410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 16312857 - 16312917
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||| |||||||  ||||||||||||||||||||||| | | |||| ||||| |||||    
T  16312857 ataatactaaaattgttcttttatataaattttcttaaaatcttgatttcattcattgtca 16312917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 1e-58; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 11588924 - 11588758
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  11588924 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctta 11588825  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11588824 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 11588758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 61 - 218
Target Start/End: Original strand, 23356557 - 23356714
Alignment:
Q  61 tttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaaacc 160  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  23356557 tttttctatttacaccccatgtttttctggttacactcaaattttcttaattttttttataataccaaaattgcccttttatataaattttcttaaaacc 23356656  T
Q  161 ctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatc 218  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23356657 ttaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatc 23356714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 26290026 - 26290195
Alignment:
Q  54 gtaagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttc 152  Q
    |||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||    
T  26290026 gtaagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttc 26290125  T
Q  153 ttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26290126 ttaaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagagatcgatcaaac 26290195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 26303283 - 26303452
Alignment:
Q  54 gtaagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttc 152  Q
    |||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||    
T  26303283 gtaagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttc 26303382  T
Q  153 ttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26303383 ttaaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagagatcgatcaaac 26303452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 26315277 - 26315446
Alignment:
Q  54 gtaagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttc 152  Q
    |||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||    
T  26315277 gtaagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttc 26315376  T
Q  153 ttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26315377 ttaaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagagatcgatcaaac 26315446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 56 - 222
Target Start/End: Complemental strand, 37579048 - 37578881
Alignment:
Q  56 aagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctt 154  Q
    |||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  37579048 aagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctt 37578949  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37578948 aaaactctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 37578881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 34918259 - 34918094
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||| ||||||||||||||||||||||    
T  34918259 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaatttttttataataccaaaattgtccttttatataaattttcttaa 34918160  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34918159 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 34918094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 15840619 - 15840451
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||  |||||||||||||||||    
T  15840619 taagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcttttttatataaattttct 15840520  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15840519 taaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 15840451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 5599145 - 5599309
Alignment:
Q  59 agtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaaa 157  Q
    ||||||||||||||||||  ||||||||||||||| ||| ||||||||||||         ||||||||||||||  |||||||||||||||||||||||    
T  5599145 agtttttctatttacaccccatgtttttctggttatactcaaattttcttaaaagttttttataataccaaaattatccttttatataaattttcttaaa 5599244  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5599245 accctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 5599309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 59 - 222
Target Start/End: Complemental strand, 5636130 - 5635966
Alignment:
Q  59 agtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaaa 157  Q
    ||||||||||||||||||  ||||||||||||||| ||| ||||||||||||         ||||||||||||||  |||||||||||||||||||||||    
T  5636130 agtttttctatttacaccccatgtttttctggttatactcaaattttcttaaaagttttttataataccaaaattatccttttatataaattttcttaaa 5636031  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5636030 accctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 5635966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 17602471 - 17602304
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||| |||||||||||||||||||||||||||||    
T  17602471 agagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataatactaaaattgcccttttatataaattttctta 17602372  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttca-ccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17602371 aaaccctaattttattcattgtcagtgagtttcaccctctttcacccccacaaagcgatcgatcaaac 17602304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 222
Target Start/End: Original strand, 3032194 - 3032360
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||||  ||||||||||||||| ||  ||||||||||||         |||||||||||| ||||||||||||||||||||||||    
T  3032194 agagtttttctatttacaccccatgtttttctggttatacccaaattttcttaatttttttttataataccaaaactgcccttttatataaattttctta 3032293  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3032294 aaactctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 3032360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 39366106 - 39365940
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||||||||||||    ||||||||||||||||||  ||||||||||||         ||||||| |||||||||||||||||||||||||||||    
T  39366106 agagtttttctatttacattccatgtttttctggttacacccaaattttcttaaaatttttttataatactaaaattgcccttttatataaattttctta 39366007  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39366006 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 39365940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 43663602 - 43663767
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||| ||||||||| |||||||||||||||||||||    
T  43663602 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaatttttttataatatcaaaattgctcttttatataaattttcttaa 43663701  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  43663702 aaccctaattttattcattgtcggtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 43663767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 24821982 - 24822150
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    ||||||||||||||||||||||  || |||||||||||||||  ||||||||||||         |||||| ||||||||||||||||||||||||||||    
T  24821982 taagagtttttctatttacaccccatatttttctggttacacccaaattttcttaaaaaaaatttataatatcaaaattgcccttttatataaattttct 24822081  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  24822082 taaaaccctaattttattcattgtcggtgagtttcaccctctttcgccccacaaagcgatcgatcaaac 24822150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 8377042 - 8376877
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttctt-aannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  || |||| || ||        |||||| |||||||||||||||||||||||||||||||    
T  8377042 gagtttttctatttacaccccatgtttttctggttacacccaatttttttttaaaattttttataatatcaaaattgcccttttatataaattttcttaa 8376943  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  8376942 aaccctaattttattcattgtcagcgagtttcaccctctttcaccccacaaagcgatcgatcaaac 8376877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 61 - 222
Target Start/End: Complemental strand, 35606158 - 35605997
Alignment:
Q  61 tttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaaacc 160  Q
    |||||||||||||| |  ||||||||||| |||||| |||||||||||||        |||||||||||||| |||||||||||||||||||||||||||    
T  35606158 tttttctatttacatcccatgtttttctgattacacctaaattttcttaattttttttataataccaaaattccccttttatataaattttcttaaaacc 35606059  T
Q  161 ctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
     |||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  35606058 ttaattttattcattgtcagtgaatttcaccctctttcaccccataaagcgatcgatcaaac 35605997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 42513007 - 42512841
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttctt-aannnnnnnnataataccaaaattgcccttttatataaattttctta 155  Q
    |||||||||||||||||| |  ||| |||| |||||||||||||||||| || ||        |||||| |||||||| |||||||||||||||||||||    
T  42513007 agagtttttctatttacatcccatgcttttttggttacacttaaattttttttaaaaaaaattataatatcaaaattgtccttttatataaattttctta 42512908  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42512907 aaactctaattttattcattgtcagtgagtttcaccctatttcaccccacaaagcgatcgatcaaac 42512841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 34564316 - 34564480
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||||||  |||||||| ||||||||   ||||||| ||||          |||||||||||||||||||||||||||||||||||||    
T  34564316 gagtttttctatttacaccccatgtttttttggttacatccaaattttattaaattttttttaaataccaaaattgcccttttatataaattttcttaaa 34564415  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  34564416 accctaattttattcattgtcaatgagtttcaccctctttcaccccataaagggatcgatcaaac 34564480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 203
Target Start/End: Original strand, 12713389 - 12713535
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         |||||| |||||||| ||||||||||||||||||||||    
T  12713389 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataatatcaaaattgtccttttatataaattttcttaa 12713488  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcacccc 203  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  12713489 aaccctaattttattcattgtcactgagtttcaccctctttcacccc 12713535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 26294410 - 26294550
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  26294410 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaa 26294509  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctcttt 197  Q
    ||||||||||||||||| ||||| ||||||||||| |||||    
T  26294510 aaccctaattttattcattgtcactgagtttcaccatcttt 26294550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 26307667 - 26307807
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  26307667 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaa 26307766  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctcttt 197  Q
    ||||||||||||||||| ||||| ||||||||||| |||||    
T  26307767 aaccctaattttattcattgtcactgagtttcaccatcttt 26307807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 119 - 207
Target Start/End: Original strand, 3136556 - 3136644
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  3136556 ataatatcaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 3136644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 16633858 - 16633961
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttctt-aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgat 217  Q
    ||||||||||||||||||||| |||||| |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16633858 ataataccaaaattgcccttt-atataatttttttttaaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgat 16633956  T
Q  218 caaac 222  Q
    |||||    
T  16633957 caaac 16633961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 26121950 - 26122027
Alignment:
Q  145 aaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26121950 aaattttcttaaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 26122027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 28884675 - 28884794
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    |||||||||||||||| |||||  |||||||||||||||||| |||||||||||||         |||||| ||||||||||||||||||||||||||||    
T  28884675 taagagtttttctattcacaccccatgtttttctggttacacctaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttct 28884774  T
Q  154 taaaaccctaattttattca 173  Q
    ||||||||||||||||||||    
T  28884775 taaaaccctaattttattca 28884794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 28910778 - 28910662
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||| |||||  |||||||||||||||||| |||||||||||||         |||||| |||||||||||||||||||||||||||||||    
T  28910778 gagtttttctattcacaccccatgtttttctggttacacctaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttcttaa 28910679  T
Q  157 aaccctaattttattca 173  Q
    |||||||||||||||||    
T  28910678 aaccctaattttattca 28910662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 5988885 - 5988823
Alignment:
Q  145 aaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  5988885 aaattttcttaaaaccctaattttattcattgtcattgagtttcaccctctttcaccccacaa 5988823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 28152312 - 28152213
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    ||||||||||||| ||||| ||| | |||||||||||||  || |||| ||||        ||||||||||||||| |||||||||||||||||||||||    
T  28152312 gagtttttctattcacaccctatatatttctggttacacccaattttt-ttaattttttttataataccaaaattgtccttttatataaattttcttaaa 28152214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 38946664 - 38946604
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  38946664 ataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 38946604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 44025569 - 44025509
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  44025569 ataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 44025509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 7969256 - 7969331
Alignment:
Q  127 aaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccc 202  Q
    ||||||| | |||||||||||||||||||||||| |||| |||||||  || | |||| |||||| ||||||||||    
T  7969256 aaaattgtctttttatataaattttcttaaaaccttaatcttattcatcgttactgagcttcaccttctttcaccc 7969331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 33772154 - 33772115
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  33772154 ataataccaaaattgtccttttatataaattttcttaaaa 33772115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 35329002 - 35329041
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  35329002 ataataccaaaattgtccttttatataaattttcttaaaa 35329041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 39713451 - 39713412
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  39713451 ataataccaaaattgcctttttatataaattttcttaaaa 39713412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 1848309 - 1848355
Alignment:
Q  127 aaaattgcccttttatataaattttcttaaaaccctaattttattca 173  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||    
T  1848309 aaaattgcccttttatataaattttcttaaaactttaatttcattca 1848355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 179
Target Start/End: Original strand, 5346738 - 5346868
Alignment:
Q  50 aaatgtaagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataa-taccaaaattgcccttttatataaat 148  Q
    ||||||| |||||||||||||||||||  || | ||| |||||| || |||||||||||||        | || || |||||||||||||||||||||||    
T  5346738 aaatgtatgagtttttctatttacaccccatatatttttggttatacctaaattttcttaaaagtttttaaaaatatcaaaattgcccttttatataaat 5346837  T
Q  149 tttcttaaaaccctaattttattcactgtca 179  Q
    | |||||| | | | |||| |||||||||||    
T  5346838 tatcttaatatcttgatttcattcactgtca 5346868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 43576086 - 43576140
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattca 173  Q
    |||||||||||||||  ||||||||||||||||||||||||| | |||| |||||    
T  43576086 ataataccaaaattgttcttttatataaattttcttaaaaccttgatttcattca 43576140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 31792969 - 31793029
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||| ||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  31792969 ataatgccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 31793029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 38459270 - 38459330
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||| ||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  38459270 ataatactaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 38459330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 44696427 - 44696387
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaac 159  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  44696427 ataatacccaaattacccttttatataaattttcttaaaac 44696387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 6448 - 6409
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  6448 ataataccaaaattgtcattttatataaattttcttaaaa 6409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 4006633 - 4006594
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  4006633 ataataccaaaattgtccttttatataaattttctgaaaa 4006594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 26121910 - 26121961
Alignment:
Q  59 agtttttctatttacaccatatgtttttctggttacacttaaattttcttaa 110  Q
    ||||||||||||||||||  |||||||||||||||||   ||||||||||||    
T  26121910 agtttttctatttacacctcatgtttttctggttacatccaaattttcttaa 26121961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 38167742 - 38167781
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  38167742 ataataccaaaattgtcctttaatataaattttcttaaaa 38167781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 40184775 - 40184721
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattca 173  Q
    |||||||| |||||||| ||||||||||||| |||||||||| | |||| |||||    
T  40184775 ataataccgaaattgccattttatataaattatcttaaaacctttatttcattca 40184721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 2827588 - 2827624
Alignment:
Q  122 ataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  2827588 ataccaaaattgtccttttatataaattctcttaaaa 2827624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 5988926 - 5988874
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaa 110  Q
    |||||||||||||||||||  |||||||| ||||||||   ||||||||||||    
T  5988926 gagtttttctatttacaccccatgtttttttggttacatccaaattttcttaa 5988874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 41941295 - 41941327
Alignment:
Q  119 ataataccaaaattgcccttttatataaatttt 151  Q
    ||||||||||||||| |||||||||||||||||    
T  41941295 ataataccaaaattgtccttttatataaatttt 41941327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 42687113 - 42687173
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| ||||||| ||||||||| |||||| | | |||| ||||| |||||    
T  42687113 ataataccaaaattgtccttttacataaattttattaaaatcttgatttcattcattgtca 42687173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 44026458 - 44026398
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||  | |||||||||||||||||||||| | | |||| ||||| |||||    
T  44026458 ataataccaaaattttctttttatataaattttcttaaaatcttgatttcattcattgtca 44026398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 1363 - 1532
Alignment:
Q  54 gtaagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttc 152  Q
    |||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||    
T  1363 gtaagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttc 1462  T
Q  153 ttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1463 ttaaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagagatcgatcaaac 1532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 6e-58; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 6468966 - 6469131
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  6468966 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaa 6469065  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6469066 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 6469131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 4155405 - 4155572
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttctt 154  Q
    ||||||||||||||||||||||  ||||||||||| |||||   ||||||||||||        ||||||||||||||| ||||||||||||||||||||    
T  4155405 taagagtttttctatttacaccccatgtttttctgattacatccaaattttcttaaatttttttataataccaaaattgtccttttatataaattttctt 4155504  T
Q  155 aaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4155505 aaaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 4155572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 38759657 - 38759822
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||| |||||| |||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  38759657 gagtttttctatttacaccccatgtttttctgattacacctaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaa 38759756  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38759757 aaccctaattttattcattgtcaatgagtttcaccctctttcaccccacaaagcgatcgatcaaac 38759822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 31510707 - 31510871
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||||||||||| ||  ||||||||||||||||||  ||||||||||||        |||||| ||||||||||||||||||||||||||||||||    
T  31510707 gagtttttctatttacgccccatgtttttctggttacacccaaattttcttaaatttttttataatatcaaaattgcccttttatataaattttcttaaa 31510806  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    || ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  31510807 actctaattttattcattgtcagtgagtttcaccctctttcaccccataaagcgatcgatcaaac 31510871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 62 - 221
Target Start/End: Complemental strand, 9066500 - 9066341
Alignment:
Q  62 ttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaaaccc 161  Q
    |||||||||||||||  ||||||||||||||||||  ||||||||||||        ||||||| ||||||||||||||||||||||||||||| |||||    
T  9066500 ttttctatttacaccccatgtttttctggttacacccaaattttcttaaatttttttataatacaaaaattgcccttttatataaattttcttagaaccc 9066401  T
Q  162 taattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaa 221  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  9066400 taattttattcattgtcagtgagtttcaccctcttttaccccacaaagcgatcgatcaaa 9066341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 33281674 - 33281509
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||||||         |||||| |||||||||||||||||||||||||||||||    
T  33281674 gagtttttctatttacaccctatgtttttctggttacacccaaattttcttaaaaaaaaattataatatcaaaattgcccttttatataaattttcttaa 33281575  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  33281574 aaccctaattttattcattgtcagtgagtttcaccctctttcatcccataaagcgatagatcaaac 33281509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 37866697 - 37866532
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||||||||||||   ||||||||||||         |||||| ||||||||||||||||||||| |||| ||||    
T  37866697 gagtttttctatttacaccccatgtttttctggttacatccaaattttcttaatttttttttataatatcaaaattgcccttttatataattttttttaa 37866598  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  37866597 aaccctaattttattcattgtcagtgagtttcactctctttcaccccacaaagcgatcgatcaaac 37866532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 43292946 - 43293111
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||||| |||||||  ||||||||||||         |||||| |||||||||||||||||||||||||||||||    
T  43292946 gagtttttctatttacaccccatgtttttctagttacacccaaattttcttaaaaaaaatttataatatcaaaattgcccttttatataaattttcttaa 43293045  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  43293046 aaccctaattttattcattgtcagtgagtttcaccttctttccccccataaagcgatcgatcaaac 43293111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 29921202 - 29921099
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatc 218  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  29921202 ataataccaaaattgtccttttatataaattttcttaaaaccctaattttattcattgccagtgagtttcaccctctttcaccccacaaagcgatcgatc 29921103  T
Q  219 aaac 222  Q
    ||||    
T  29921102 aaac 29921099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 25143794 - 25143631
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaaa 157  Q
    |||||||| |||||||||| ||||||||| || ||||||  ||||||| ||||        ||||| |||||||||||||||||||||| |||| |||||    
T  25143794 gagtttttgtatttacaccctatgtttttttg-ttacacccaaatttttttaaaagtttttataattccaaaattgcccttttatataattttttttaaa 25143696  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25143695 accctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgattaaac 25143631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 61 - 222
Target Start/End: Original strand, 13145154 - 13145318
Alignment:
Q  61 tttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn---ataataccaaaattgcccttttatataaattttcttaaa 157  Q
    ||||||||||||||||  ||||||||||||||||||  || |||||||||           |||||| ||||||||| ||||||||||||||||| ||||    
T  13145154 tttttctatttacaccccatgtttttctggttacacccaagttttcttaatttttttttttataatatcaaaattgctcttttatataaattttcctaaa 13145253  T
Q  158 accctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13145254 gccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 13145318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 25085824 - 25085659
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||| |||||||||| ||||||||| | |||||||  ||||||| ||||         ||||| |||||||||||||||||||||| |||| ||||    
T  25085824 gagtttttgtatttacaccctatgttttttttgttacacccaaatttttttaaaagttttttataattccaaaattgcccttttatataattttttttaa 25085725  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25085724 aaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgattaaac 25085659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 207
Target Start/End: Original strand, 43517552 - 43517705
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttct 153  Q
    |||||||||||||||||||||   || |||||||||||||||  ||||||||||||         ||||||||||||||| |||||||||||||||||||    
T  43517552 taagagtttttctatttacacttcatatttttctggttacacccaaattttcttaaaagttttttataataccaaaattgtccttttatataaattttct 43517651  T
Q  154 taaaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  43517652 taaaaccctaattttattcattgtcactgagtttcaccctctttcaccccacaa 43517705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 58 - 207
Target Start/End: Original strand, 19616875 - 19617021
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  19616875 gagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaa 19616974  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaa 207  Q
    ||||||||||||||||| |    ||||||||||||||||||||||||||||    
T  19616975 aaccctaattttattcatt----gtgagtttcaccctctttcaccccacaa 19617021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 19033978 - 19034149
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||| |  |||||||| | ||||||| |||||||| ||||         |||||||||||||||| |||||||||||||||| ||||    
T  19033978 gagtttttctatttacatcccatgtttttttagttacacctaaatttttttaaattttttttataataccaaaattgctcttttatataaatttttttaa 19034077  T
Q  157 aaccctaattttattcactgtc------agtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||      ||||||||||||||||||||||||||||||||||||||||||||    
T  19034078 aaccctaattttattcattgtcattgttagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 19034149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 57 - 192
Target Start/End: Complemental strand, 24559907 - 24559771
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    ||||||||| |||||||||| ||||||||||| |||||||  ||||||||||||         ||||||||||||||| ||| |||||||||||||||||    
T  24559907 agagtttttatatttacaccctatgtttttctagttacacccaaattttcttaaattttttttataataccaaaattgtcctattatataaattttctta 24559808  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccc 192  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  24559807 aaaccctaattttattcattgtaagtgagtttcaccc 24559771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 192
Target Start/End: Complemental strand, 24600938 - 24600804
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnnataataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||| |||||||||| |||||||| || |||||||  ||||||||||||        ||||||||||||||| ||| ||||||||||||||||||    
T  24600938 agagtttttatatttacaccctatgtttt-ctagttacacccaaattttcttaaatttttttataataccaaaattgtcctattatataaattttcttaa 24600840  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccc 192  Q
    ||||||||||||||||| ||| ||||||||||||||    
T  24600839 aaccctaattttattcattgtaagtgagtttcaccc 24600804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 41881065 - 41881125
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  41881065 ataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 41881125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 31499713 - 31499674
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  31499713 ataataccaaaattgtccttttatataaattttcttaaaa 31499674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 36294767 - 36294728
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  36294767 ataataccaaaattgtccttttatataaattttcttaaaa 36294728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 38769194 - 38769155
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  38769194 ataataccaaaattgtccttttatataaattttcttaaaa 38769155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 43149270 - 43149357
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttctt-aannnnnnnnataataccaaaattgcccttttata 143  Q
    ||||||||||||||||||||  || |||||||||||||||  |||||||||| ||        |||||||||||||||||||||||||    
T  43149270 agagtttttctatttacaccccatatttttctggttacacccaaattttcttaaattttttttataataccaaaattgcccttttata 43149357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 35318725 - 35318766
Alignment:
Q  130 attgcccttttatataaattttcttaaaaccctaattttatt 171  Q
    |||||||||||||||||||||| |||||||| ||||||||||    
T  35318725 attgcccttttatataaatttttttaaaaccttaattttatt 35318766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 7339712 - 7339652
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||| ||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  7339712 ataatacaaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 7339652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 10665348 - 10665408
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||||||||||||  ||||||||||||||||||||||| | || ||| ||||| |||||    
T  10665348 ataataccaaaattgttcttttatataaattttcttaaaatcttattttcattcattgtca 10665408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 18522903 - 18522843
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| ||||||||||| |||||||||||| | | |||| ||||| |||||    
T  18522903 ataataccaaaattgtccttttatatatattttcttaaaatcttgatttcattcattgtca 18522843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 4622085 - 4622046
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  4622085 ataataccaaaattgtccttttatataaatttttttaaaa 4622046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 6246152 - 6246113
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  6246152 ataataccaaaattgttcttttatataaattttcttaaaa 6246113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 15021257 - 15021218
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  15021257 ataatatcaaaattgtccttttatataaattttcttaaaa 15021218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 27309819 - 27309784
Alignment:
Q  121 aataccaaaattgcccttttatataaattttcttaa 156  Q
    ||||||||||||||||||||||||||||| ||||||    
T  27309819 aataccaaaattgcccttttatataaattatcttaa 27309784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 29385574 - 29385644
Alignment:
Q  119 ataataccaaaattgcccttttatat-aaattttcttaaaaccctaattttattcactgtcagtgagtttca 189  Q
    |||||| |||||||| |||||||||| |||||||||||||| ||| |||||||||| ||||| | |||||||    
T  29385574 ataataacaaaattgtccttttatataaaattttcttaaaa-cctgattttattcattgtcactaagtttca 29385644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 37106917 - 37106878
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  37106917 ataataccaaaattgtctttttatataaattttcttaaaa 37106878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 40740061 - 40740022
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaa 158  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  40740061 ataataccaaaattgtcctttaatataaattttcttaaaa 40740022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 10553087 - 10553027
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||| |||||||| ||||||||||||||||| |||||| | | |||| ||||| |||||    
T  10553087 ataatatcaaaattgtccttttatataaatttttttaaaatcttgatttcattcattgtca 10553027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 13210232 - 13210292
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||| ||||||| | |||||||||||||||||||||| | | |||| ||||| |||||    
T  13210232 ataatactaaaattgtcattttatataaattttcttaaaatcttgatttcattcattgtca 13210292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 15271890 - 15271950
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| ||||||||||||| ||| |||||| | | |||| ||||| |||||    
T  15271890 ataataccaaaattgtccttttatataaaattttttaaaatcttgatttcattcattgtca 15271950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 24478321 - 24478261
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||| ||||||  |||||||||||||||||||||||| | | |||| ||||| |||||    
T  24478321 ataatactaaaattatccttttatataaattttcttaaaatcttgatttcattcattgtca 24478261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 4835 - 4669
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn--ataataccaaaattgcccttttatataaattttctta 155  Q
    |||||||||||||||||||  || |||||||||||||||  ||||||||||||          |||||| |||||||| |||||||||||||||||||||    
T  4835 gagtttttctatttacaccccatatttttctggttacacccaaattttcttaaatttttttttataatatcaaaattgtccttttatataaattttctta 4736  T
Q  156 aaaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4735 aaaccctaattttattcattgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 4669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 14685 - 14520
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||| |||||||||  ||||||||||||         |||||||||||||||||||||||||||||||||||| |    
T  14685 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttta 14586  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  14585 aatcctaattttattcattgtcagtgagtttcaccctctttcaccccacaaaacgatcgatcaaac 14520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 41349 - 41184
Alignment:
Q  58 gagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttcttaa 156  Q
    |||||||||||||||||||  |||||||| |||||||||  ||||||||||||         |||||| |||||||||||||||||||||||||||||||    
T  41349 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaatttttttttataatatcaaaattgcccttttatataaattttcttaa 41250  T
Q  157 aaccctaattttattcactgtcagtgagtttcaccctctttcaccccacaaagcgatcgatcaaac 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  41249 aaccctaattttattcattgtcagtgagtttcaccctctttcatcccataaagcgatcgatcaaac 41184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 156353 - 156492
Alignment:
Q  55 taagagtttttctatttacaccatatgtttttctggttacacttaaattttctt--aannnnnnnnataataccaaaattgcccttttatataaattttc 152  Q
    |||||||||||||||||||||   ||||||||||||||||||  || |||| ||  ||        |||||| |||||||||  ||||||||||||||||    
T  156353 taagagtttttctatttacactccatgtttttctggttacacccaattttttttttaaaattttttataatatcaaaattgcttttttatataaattttc 156452  T
Q  153 ttaaaaccctaattttattcactgtcagtgagtttcaccc 192  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  156453 ttaaaaccctaattttattcattgtcagtgagtttcaccc 156492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 200752 - 200692
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||| ||||||| | ||||||||||||||||||||||   | |||||||||| |||||    
T  200752 ataatactaaaattgtcattttatataaattttcttaaaattttgattttattcattgtca 200692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 37354 - 37471
Alignment:
Q  57 agagtttttctatttacaccatatgtttttctggttacacttaaattttcttaannnnnnnn-ataataccaaaattgcccttttatataaattttctta 155  Q
    |||||||||||||| |||||  |||||||| |||||||||  ||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  37354 agagtttttctattcacaccccatgtttttttggttacacccaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttctta 37453  T
Q  156 aaaccctaattttattca 173  Q
    ||||||||||||||||||    
T  37454 aaaccctaattttattca 37471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 6850 - 6910
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    ||||||||||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  6850 ataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 6910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 164 - 104
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||| |||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  164 ataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 329 - 269
Alignment:
Q  119 ataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcactgtca 179  Q
    |||||| |||||||| |||||||||||||||||||||||| | | |||| ||||| |||||    
T  329 ataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtca 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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