View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12533_low_10 (Length: 240)
Name: NF12533_low_10
Description: NF12533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12533_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 43410430 - 43410650
Alignment:
| Q |
4 |
tttatgcgaagcaaattaaacatcctaaaataactaagaaaaactatcacggcgtagtccttcaaactgcaaatataattatcatcatcataggttagtt |
103 |
Q |
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| T |
43410430 |
tttatgcgaagcaaattaaacatcctaaaataactaagaaaaactatcacggcgtagtccttcaaactgcaaatataattatcatcatcataggttagtt |
43410529 |
T |
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| Q |
104 |
ggcaaggtagaaagcaaatcttccaagaaaccatcagaaccaaacctcatagcaaatacaagctagctgcttaagtgcatataatgcacatgtgcataac |
203 |
Q |
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| T |
43410530 |
ggcaaggtagaaagcaaatcttccaagaaaccatcagaaccaaacctcatagcaaatacaagctagctgcataagtgcatataatgcacatgtgcataac |
43410629 |
T |
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| Q |
204 |
tggcatgctttgtatgtgatg |
224 |
Q |
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||||||||||||||||||||| |
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| T |
43410630 |
tggcatgctttgtatgtgatg |
43410650 |
T |
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