View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12534_high_6 (Length: 355)

Name: NF12534_high_6
Description: NF12534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12534_high_6
NF12534_high_6
[»] chr4 (24 HSPs)
chr4 (1-221)||(6209404-6209619)
chr4 (247-339)||(6209731-6209823)
chr4 (5-74)||(4098725-4098794)
chr4 (10-73)||(43793802-43793865)
chr4 (10-73)||(4433354-4433417)
chr4 (10-73)||(13397846-13397909)
chr4 (10-73)||(15058989-15059052)
chr4 (10-73)||(41877197-41877260)
chr4 (5-59)||(51291336-51291390)
chr4 (91-139)||(1521548-1521596)
chr4 (17-73)||(25011805-25011861)
chr4 (10-73)||(19232515-19232578)
chr4 (10-73)||(27018285-27018347)
chr4 (10-132)||(9195835-9195956)
chr4 (2-59)||(48158680-48158737)
chr4 (10-58)||(35475374-35475422)
chr4 (84-139)||(2931565-2931620)
chr4 (10-73)||(5304518-5304580)
chr4 (10-73)||(13826590-13826652)
chr4 (10-72)||(1588584-1588645)
chr4 (10-72)||(2931392-2931454)
chr4 (89-150)||(14857274-14857335)
chr4 (84-132)||(19881771-19881819)
chr4 (94-146)||(52838485-52838537)
[»] chr1 (22 HSPs)
chr1 (5-132)||(18606850-18606977)
chr1 (5-74)||(21148047-21148116)
chr1 (10-73)||(46432387-46432450)
chr1 (10-73)||(24196331-24196394)
chr1 (10-73)||(24962023-24962086)
chr1 (5-74)||(29182167-29182235)
chr1 (5-73)||(16551810-16551878)
chr1 (8-74)||(2260548-2260612)
chr1 (10-73)||(19078096-19078158)
chr1 (10-73)||(19125986-19126048)
chr1 (10-73)||(24749868-24749931)
chr1 (10-73)||(51719292-51719355)
chr1 (8-74)||(4455212-4455278)
chr1 (84-144)||(21148193-21148253)
chr1 (10-73)||(4059693-4059756)
chr1 (10-73)||(43706825-43706887)
chr1 (10-73)||(48472034-48472097)
chr1 (9-59)||(16971934-16971984)
chr1 (5-73)||(9387763-9387831)
chr1 (20-73)||(28920832-28920885)
chr1 (5-73)||(22786100-22786167)
chr1 (17-73)||(28750347-28750403)
[»] chr3 (32 HSPs)
chr3 (6-73)||(20001779-20001846)
chr3 (10-73)||(23428790-23428853)
chr3 (10-73)||(4522024-4522087)
chr3 (10-73)||(8542680-8542743)
chr3 (10-118)||(22500766-22500874)
chr3 (10-73)||(26628196-26628259)
chr3 (10-73)||(27852922-27852985)
chr3 (10-73)||(48907463-48907526)
chr3 (7-73)||(4775921-4775986)
chr3 (10-148)||(22447915-22448054)
chr3 (10-58)||(28173900-28173948)
chr3 (10-73)||(8339111-8339174)
chr3 (10-73)||(25022834-25022897)
chr3 (10-73)||(30155316-30155379)
chr3 (10-73)||(46673218-46673281)
chr3 (10-72)||(3328984-3329046)
chr3 (9-139)||(25336361-25336489)
chr3 (10-64)||(28155053-28155107)
chr3 (10-73)||(3780951-3781011)
chr3 (10-62)||(9496388-9496440)
chr3 (5-57)||(33279751-33279803)
chr3 (10-73)||(40836350-40836411)
chr3 (9-73)||(46387744-46387807)
chr3 (10-132)||(48860714-48860835)
chr3 (10-130)||(10743421-10743540)
chr3 (10-73)||(13080964-13081027)
chr3 (10-73)||(25179648-25179711)
chr3 (10-56)||(34878700-34878746)
chr3 (5-74)||(18388866-18388934)
chr3 (10-73)||(26127077-26127138)
chr3 (10-73)||(26177127-26177188)
chr3 (11-59)||(32315003-32315051)
[»] chr6 (25 HSPs)
chr6 (8-144)||(2058991-2059126)
chr6 (5-139)||(4013833-4013966)
chr6 (10-73)||(18791427-18791490)
chr6 (10-73)||(22968325-22968388)
chr6 (10-73)||(23820005-23820068)
chr6 (5-74)||(26240024-26240094)
chr6 (10-73)||(3118749-3118812)
chr6 (10-73)||(24603431-24603494)
chr6 (10-73)||(34833995-34834058)
chr6 (10-132)||(14572349-14572470)
chr6 (10-74)||(31210863-31210927)
chr6 (10-73)||(4370968-4371030)
chr6 (10-73)||(4597576-4597639)
chr6 (10-73)||(8412828-8412891)
chr6 (10-73)||(15298555-15298618)
chr6 (10-73)||(18749299-18749362)
chr6 (10-73)||(25819755-25819817)
chr6 (11-73)||(24051078-24051140)
chr6 (8-76)||(16415500-16415567)
chr6 (10-58)||(35102662-35102710)
chr6 (10-73)||(26710478-26710541)
chr6 (10-73)||(32451796-32451859)
chr6 (5-35)||(12291584-12291614)
chr6 (10-131)||(19282382-19282503)
chr6 (84-144)||(34834170-34834230)
[»] chr7 (28 HSPs)
chr7 (5-74)||(3403218-3403287)
chr7 (5-74)||(15681666-15681735)
chr7 (10-73)||(2331083-2331146)
chr7 (10-73)||(20636689-20636752)
chr7 (10-73)||(20638561-20638624)
chr7 (10-73)||(21224523-21224586)
chr7 (10-73)||(27869366-27869429)
chr7 (10-73)||(35337693-35337756)
chr7 (10-73)||(41452420-41452483)
chr7 (10-73)||(42271402-42271465)
chr7 (5-59)||(24464659-24464713)
chr7 (5-59)||(26126338-26126391)
chr7 (10-58)||(18754437-18754485)
chr7 (10-73)||(3562604-3562666)
chr7 (8-59)||(6798083-6798134)
chr7 (10-73)||(19195384-19195447)
chr7 (10-73)||(24597686-24597749)
chr7 (1-51)||(24448206-24448256)
chr7 (5-58)||(4571510-4571563)
chr7 (8-73)||(26385331-26385395)
chr7 (10-73)||(17305835-17305897)
chr7 (10-73)||(31493981-31494043)
chr7 (10-59)||(44078042-44078091)
chr7 (10-58)||(21225719-21225766)
chr7 (95-139)||(21810097-21810141)
chr7 (10-58)||(36746674-36746722)
chr7 (84-144)||(39182179-39182239)
chr7 (10-58)||(48176134-48176181)
[»] chr8 (20 HSPs)
chr8 (10-131)||(32400493-32400613)
chr8 (10-73)||(21666445-21666508)
chr8 (10-73)||(17648313-17648376)
chr8 (10-73)||(19391558-19391621)
chr8 (10-73)||(19924335-19924398)
chr8 (10-73)||(30784435-30784498)
chr8 (10-73)||(4519038-4519101)
chr8 (10-73)||(21929974-21930036)
chr8 (10-73)||(22452344-22452407)
chr8 (10-73)||(33895444-33895507)
chr8 (10-73)||(44147042-44147104)
chr8 (10-72)||(38630126-38630188)
chr8 (5-73)||(1824677-1824742)
chr8 (5-73)||(1859122-1859187)
chr8 (12-73)||(8802572-8802633)
chr8 (10-73)||(5192442-5192505)
chr8 (10-73)||(12723432-12723495)
chr8 (95-146)||(22452169-22452220)
chr8 (8-72)||(18253056-18253117)
chr8 (10-73)||(4807771-4807835)
[»] chr5 (24 HSPs)
chr5 (10-131)||(25557046-25557167)
chr5 (10-73)||(26639208-26639271)
chr5 (8-76)||(41663693-41663759)
chr5 (10-143)||(245595-245727)
chr5 (10-73)||(31055485-31055548)
chr5 (5-72)||(38476636-38476703)
chr5 (8-73)||(8645867-8645932)
chr5 (7-72)||(34125130-34125195)
chr5 (5-73)||(35302081-35302148)
chr5 (5-73)||(37961415-37961483)
chr5 (92-144)||(41663522-41663574)
chr5 (10-73)||(16901168-16901230)
chr5 (10-73)||(18695074-18695136)
chr5 (5-74)||(23040115-23040183)
chr5 (10-72)||(23765561-23765622)
chr5 (10-72)||(23815409-23815470)
chr5 (24-73)||(31648125-31648174)
chr5 (10-73)||(16307647-16307711)
chr5 (10-73)||(10293258-10293321)
chr5 (84-139)||(20654040-20654095)
chr5 (9-74)||(23040209-23040273)
chr5 (10-73)||(36641213-36641276)
chr5 (5-74)||(17825664-17825732)
chr5 (9-74)||(20653889-20653953)
[»] scaffold1202 (1 HSPs)
scaffold1202 (10-73)||(1945-2008)
[»] chr2 (18 HSPs)
chr2 (10-73)||(4587931-4587994)
chr2 (10-74)||(2986755-2986819)
chr2 (10-73)||(11175977-11176040)
chr2 (10-73)||(38716263-38716326)
chr2 (5-73)||(36464344-36464410)
chr2 (10-70)||(15700820-15700880)
chr2 (10-73)||(6763888-6763951)
chr2 (10-73)||(9051198-9051261)
chr2 (10-73)||(18537999-18538062)
chr2 (10-73)||(22191116-22191179)
chr2 (10-73)||(30714445-30714508)
chr2 (10-129)||(9787573-9787692)
chr2 (5-74)||(43301724-43301792)
chr2 (10-73)||(331782-331845)
chr2 (10-73)||(15735134-15735197)
chr2 (10-73)||(25298972-25299035)
chr2 (84-133)||(12350256-12350305)
chr2 (8-73)||(25884347-25884411)
[»] scaffold0087 (1 HSPs)
scaffold0087 (10-72)||(25135-25197)
[»] scaffold0002 (2 HSPs)
scaffold0002 (5-74)||(454999-455068)
scaffold0002 (5-67)||(455102-455164)
[»] scaffold0267 (1 HSPs)
scaffold0267 (10-73)||(3739-3800)
[»] scaffold0179 (1 HSPs)
scaffold0179 (10-73)||(5820-5883)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-76)||(112193-112264)
[»] scaffold0062 (2 HSPs)
scaffold0062 (10-70)||(49732-49792)
scaffold0062 (10-70)||(62271-62331)
[»] scaffold0607 (1 HSPs)
scaffold0607 (10-73)||(2220-2283)
[»] scaffold0419 (1 HSPs)
scaffold0419 (10-73)||(3131-3194)
[»] scaffold0025 (2 HSPs)
scaffold0025 (10-73)||(61884-61947)
scaffold0025 (10-73)||(19354-19415)
[»] scaffold0001 (1 HSPs)
scaffold0001 (10-73)||(142118-142180)
[»] scaffold0291 (1 HSPs)
scaffold0291 (5-74)||(9991-10058)
[»] scaffold0150 (1 HSPs)
scaffold0150 (10-58)||(5916-5965)
[»] scaffold1875 (1 HSPs)
scaffold1875 (5-73)||(923-990)
[»] scaffold0174 (1 HSPs)
scaffold0174 (5-72)||(29789-29853)
[»] scaffold0060 (1 HSPs)
scaffold0060 (10-58)||(66259-66307)


Alignment Details
Target: chr4 (Bit Score: 109; Significance: 9e-55; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6209404 - 6209619
Alignment:
Q  1 tcataagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnn-aataggaggtcaaaat 99  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||        |||||| |  ||||||    
T  6209404 tcataagatcatttttcccttatgttagggg-tcaaaaatgcataattccctaaacatgtggggtcacttttgtaattttttttaataggggaccaaaat 6209502  T
Q  100 tacaatattttaaaatttaggggtcgaaaagtgcaatttaaccttaatattataaacagtgtggtatctatcaacgcatcattacaatttaagtgacgaa 199  Q
      ||| ||||||||| ||||||||| |||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||| ||     
T  6209503 cgcaacattttaaaacttaggggtctaaaagtgcaatttaaccttaatattat-----gtgtggtatctatcaacgcatcattacaatttaagtgaggag 6209597  T
Q  200 aatgtcacgtgctttgaaataa 221  Q
    |||||| |||||||||||||||    
T  6209598 aatgtcgcgtgctttgaaataa 6209619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 6209731 - 6209823
Alignment:
Q  247 aaagtttggacgttacatgataattgttttaggatggtctctaaaattgggaggaagcagtatgtattgtctttagcaaaaattcacacttct 339  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6209731 aaagtttgatcgttacatgatgattgttttaggatggtctctaaaattgggaggaagcagtatgtattgtcttcagcaaaaattcacacttct 6209823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 4098794 - 4098725
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||| ||||||  ||||||||||||||    
T  4098794 aagatcatatttcccttatgttagggggtcaaaagagcatatttcccaaaacatagggggtcacttttgt 4098725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 43793802 - 43793865
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||||||||||    
T  43793802 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttg 43793865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 4433354 - 4433417
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| |||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  4433354 catattttccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 4433417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 13397846 - 13397909
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  13397846 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 13397909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 15058989 - 15059052
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  15058989 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 15059052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 41877197 - 41877260
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  41877197 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 41877260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 51291336 - 51291390
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatg 59  Q
    ||||||||||||||||||||||||||||||| ||   ||||||||||||||||||    
T  51291336 aagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacatg 51291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 1521596 - 1521548
Alignment:
Q  91 ggtcaaaattacaatattttaaaatttaggggtcgaaaagtgcaattta 139  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  1521596 ggtcaaaattacaatattttgaaacttaggggtcgaaaagtgcatttta 1521548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 25011861 - 25011805
Alignment:
Q  17 cccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  25011861 cccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 25011805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 19232515 - 19232578
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| ||||||||||||| |||| ||  |||||||||||||||||| |||| |||||||||    
T  19232515 catattttccttatgttagggagtcaaaagagcatatttccctaaacatatgggatcacttttg 19232578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 27018347 - 27018285
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||| ||||||||||||| ||  |||||||||||||||||| | ||||||||||||    
T  27018347 catatttcccttttgttagggggtcaaaagagcatatttccctaaacatat-gggtcacttttg 27018285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 9195835 - 9195956
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatattt 109  Q
    |||||||||||||||||| ||| ||| ||  ||||||||||||||||||  |||||||||||||| |       |||||| |  ||||||  ||| ||||    
T  9195835 catatttcccttatgttatggg-tcaaaagagcatatttccctaaacatagggggtcacttttgtcatttttttaataggggaccaaaatcgcaacattt 9195933  T
Q  110 taaaatttaggggtcgaaaagtg 132  Q
    | ||||||||||| |||||||||    
T  9195934 tgaaatttagggggcgaaaagtg 9195956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 48158737 - 48158680
Alignment:
Q  2 cataagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatg 59  Q
    ||||||| ||||||||||||||||||| |||||| ||   ||||||||||||||||||    
T  48158737 cataagagcatatttcccttatgttagagggtcaaaagatcatatttccctaaacatg 48158680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 35475422 - 35475374
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacat 58  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||    
T  35475422 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 35475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 2931565 - 2931620
Alignment:
Q  84 aataggaggtcaaaattacaatattttaaaatttaggggtcgaaaagtgcaattta 139  Q
    |||||||||| |||||||||| |||||||||  |||||| ||||||||||| ||||    
T  2931565 aataggaggttaaaattacaacattttaaaacatagggggcgaaaagtgcagttta 2931620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 5304518 - 5304580
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| |||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  5304518 catattttccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttg 5304580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 13826590 - 13826652
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||| ||||||  |||||||||||||    
T  13826590 catatttcccttatgttaggaggtcaaaagagcatatttcccgaaacat-aggggtcacttttg 13826652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 1588584 - 1588645
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||||||  | ||||||||||    
T  1588584 catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacataggaggtcactttt 1588645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 2931454 - 2931392
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    ||||||||| |||||||| | ||||| ||  ||||||||||||||||||  ||||||||||||    
T  2931454 catatttcctttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcactttt 2931392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 14857335 - 14857274
Alignment:
Q  89 gaggtcaaaattacaatattttaaaatttaggggtcgaaaagtgcaatttaaccttaatatt 150  Q
    |||||||||||| ||  ||||||||||||||| | | ||||||||| |||||||||| ||||    
T  14857335 gaggtcaaaattgcagcattttaaaatttaggaggccaaaagtgcagtttaaccttattatt 14857274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 19881771 - 19881819
Alignment:
Q  84 aataggaggtcaaaattacaatattttaaaatttaggggtcgaaaagtg 132  Q
    ||||| ||||||||||| ||| ||||||||||||||||  |||||||||    
T  19881771 aatagaaggtcaaaattgcaacattttaaaatttagggaacgaaaagtg 19881819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 52838485 - 52838537
Alignment:
Q  94 caaaattacaatattttaaaatttaggggtcgaaaagtgcaatttaaccttaa 146  Q
    ||||| ||||| |||||||||  |||||| ||||||||||||| |||||||||    
T  52838485 caaaactacaacattttaaaacataggggacgaaaagtgcaatctaaccttaa 52838537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 18606850 - 18606977
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaa 104  Q
    |||||| ||||| |||||||||| ||||||| ||  ||||||||||||||||||| ||||||||||||   |       |||||| ||||||||| ||||    
T  18606850 aagatcgtattttccttatgttatggggtcaaaagagcatatttccctaaacatgaggggtcactttttccagttttttaatagggggtcaaaatcacaa 18606949  T
Q  105 tattttaaaatttaggggtcgaaaagtg 132  Q
     ||||||||| |||||||||||||||||    
T  18606950 cattttaaaacttaggggtcgaaaagtg 18606977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 21148116 - 21148047
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||  ||||||||||||||    
T  21148116 aagatcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgt 21148047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 46432387 - 46432450
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  46432387 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 46432450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 24196394 - 24196331
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||| |||||||| ||||||||||||||    
T  24196394 catatttcccttatgttaggaggtcaaaagagcatatttctctaaacatatggggtcacttttg 24196331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 24962086 - 24962023
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  24962086 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 24962023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 29182167 - 29182235
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||| ||||||||  ||||||||||||||    
T  29182167 aagatcatatttcccttatgtta-ggggtcaaaagagcatatttctctaaacataaggggtcacttttgt 29182235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 16551810 - 16551878
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||||  || |||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  16551810 aagatcatatttgtctgatgttagggggtcaaaagagcatatttccctaaacattgggggtcacttttg 16551878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 2260548 - 2260612
Alignment:
Q  8 atcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    |||||||||||||||| ||| ||||||| ||| ||||||||| |||||||  |||||||||||||||    
T  2260548 atcatatttcccttatattatggggtcaaaaaagcatatttcactaaaca--tggggtcacttttgt 2260612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 19078096 - 19078158
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  19078096 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttg 19078158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 19125986 - 19126048
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  19125986 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttg 19126048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 24749931 - 24749868
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| | ||||| ||  ||||||||||||||||||  |||||||||||||    
T  24749931 catatttcccttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcacttttg 24749868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 51719292 - 51719355
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| |||||||||||||| ||| ||  ||||||||||||||||||  |||||||||||||    
T  51719292 catattttccttatgttaggggatcaaaagagcatatttccctaaacataaggggtcacttttg 51719355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 4455212 - 4455278
Alignment:
Q  8 atcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    |||||||||||||||||||| ||||||| ||  |||||||| |||||||||  ||| ||||||||||    
T  4455212 atcatatttcccttatgttacggggtcaaaagagcatattttcctaaacattggggatcacttttgt 4455278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 21148193 - 21148253
Alignment:
Q  84 aataggaggtcaaaattacaatattttaaaatttaggggtcgaaaagtgcaatttaacctt 144  Q
    |||||| || ||||||  ||| ||||||||||||||||||||||||||||| |||| ||||    
T  21148193 aatagggggccaaaatcgcaacattttaaaatttaggggtcgaaaagtgcagtttatcctt 21148253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 4059693 - 4059756
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| |||||||||||| ||||| ||  ||||||||||||||||||   ||||||||||||    
T  4059693 catattttccttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttg 4059756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 43706825 - 43706887
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| ||| ||| ||  ||||||||||||||||||  |||||||||||||    
T  43706825 catatttcccttatgttatggg-tcaaaagagcatatttccctaaacatagggggtcacttttg 43706887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 48472034 - 48472097
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||| ||||||||||| ||||| ||  ||||||||||||||||||  ||||||| |||||    
T  48472034 catatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcaattttg 48472097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 16971984 - 16971934
Alignment:
Q  9 tcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatg 59  Q
    ||||||||||||||||||||||||||  ||  |||||| ||||||||||||    
T  16971984 tcatatttcccttatgttagggggtctaaagagcatatatccctaaacatg 16971934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 9387831 - 9387763
Alignment:
Q  5 aagatcatatttcccttatgttag-ggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||| |||||||||||||||||| ||||||| ||  |||||||||| |||||||| ||||| |||||||    
T  9387831 aagattatatttcccttatgttaggggggtcaaaagagcatatttccttaaacatg-ggggttacttttg 9387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 28920832 - 28920885
Alignment:
Q  20 ttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  28920832 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 28920885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 22786167 - 22786100
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||||| ||||||||||  | ||| ||  ||||||||||||||||||| ||| |||||||||    
T  22786167 aagatcatatttcacttatgttagatg-tcaaaagagcatatttccctaaacatgggggctcacttttg 22786100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 28750403 - 28750347
Alignment:
Q  17 cccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||| |||||| ||  ||||||||  ||||||||| |||||||||||||    
T  28750403 cccttatgttagagggtcaaaagagcatatttttctaaacatgaggggtcacttttg 28750347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 20001846 - 20001779
Alignment:
Q  6 agatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  20001846 agatcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 20001779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 23428790 - 23428853
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  23428790 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 23428853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 4522087 - 4522024
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| | ||||| ||  |||||||||||||||||| ||||||||||||||    
T  4522087 catatttcccttatgttaagaggtcaaaagagcatatttccctaaacatatggggtcacttttg 4522024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 8542743 - 8542680
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  8542743 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 8542680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 22500766 - 22500874
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatattt 109  Q
    |||||||||||||||||||| ||||| ||  |||||||| |||||||||  |||||||||||||  |       |||||| |||||||||| ||| ||||    
T  22500766 catatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcacttttgccatttttttaatagggggtcaaaattgcaacattt 22500865  T
Q  110 taaaattta 118  Q
    |||||||||    
T  22500866 taaaattta 22500874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 26628196 - 26628259
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  26628196 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 26628259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 27852922 - 27852985
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  27852922 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 27852985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 48907463 - 48907526
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  48907463 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 48907526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 4775986 - 4775921
Alignment:
Q  7 gatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||||| ||||| ||||||||| ||  ||||||||||||||||||| |||||||||||||    
T  4775986 gatcatatttcccgtatgtgagggggtcaaaatagcatatttccctaaacatg-ggggtcacttttg 4775921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 22447915 - 22448054
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg-taannnnnnnaataggaggtcaaaattacaatatt 108  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  | |||||||||||  |        |||||| || ||||||| ||| |||    
T  22447915 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgccatattttttaatagggggccaaaattgcaacatt 22448014  T
Q  109 ttaaaatttaggggtcgaaaagtgcaatttaaccttaata 148  Q
    |||||| |||| || ||||||||||| |||||||| ||||    
T  22448015 ttaaaacttagagggcgaaaagtgcagtttaacctaaata 22448054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 28173900 - 28173948
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacat 58  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  28173900 catatttcccttatgttagggggtcaaaagagcatatttccctaaacat 28173948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 8339111 - 8339174
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||  |||||||||| ||||| ||| ||||||||||||||||||  |||||||||||||    
T  8339111 catatttctattatgttaggaggtcaaaaaagcatatttccctaaacataaggggtcacttttg 8339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 25022834 - 25022897
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||| |||||||||||| ||||||| ||  ||||||||||||||||||  |||||||||||||    
T  25022834 catatatcccttatgttatggggtcaaaagagcatatttccctaaacatagggggtcacttttg 25022897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 30155316 - 30155379
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  ||| |||||||||    
T  30155316 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcacttttg 30155379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 46673218 - 46673281
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||||||||||||| |||| ||  ||||||||||||||||||  ||| |||||||||    
T  46673218 catatttcccttatgttagggagtcaaaagagcatatttccctaaacataggggatcacttttg 46673281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 3328984 - 3329046
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    |||||||||||||||||||| ||||| ||  |||||||||||||||| |  ||||||||||||    
T  3328984 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacttagggggtcactttt 3329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 25336489 - 25336361
Alignment:
Q  9 tcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatatt 108  Q
    ||||||||||||||||||||||||||| ||  ||||| ||||||||  || | || |||||||||| |       |||| |||| ||||||| ||| |||    
T  25336489 tcatatttcccttatgttagggggtcaaaagagcataattccctaa--atataggttcacttttgtcatttttttaataagaggccaaaattgcaacatt 25336392  T
Q  109 ttaaaatttaggggtcgaaaagtgcaattta 139  Q
    || ||||||| ||| ||||||||||| ||||    
T  25336391 ttgaaatttaaggggcgaaaagtgcagttta 25336361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 28155053 - 28155107
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtgggg 64  Q
    |||||||||||||||||||| ||||| ||  |||||||||||||||||| |||||    
T  28155053 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatgggg 28155107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 3781011 - 3780951
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| ||||||| ||  |||||||||||||||||  ||||||||||||||    
T  3781011 catatttcccttatgtta-ggggtcaaaagagcatatttccctaaaca--tggggtcacttttg 3780951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 9496388 - 9496440
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtgg 62  Q
    ||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||    
T  9496388 catatttcctttatgttagagggtcaaaagagcatatttccctaaacatgtgg 9496440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 33279751 - 33279803
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaaca 57  Q
    |||| |||||||||||||||||||||||||| ||  |||||||| ||||||||    
T  33279751 aagagcatatttcccttatgttagggggtcaaaagagcatattttcctaaaca 33279803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 40836350 - 40836411
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||| ||||||||||| ||   ||||||||||||||||  ||||||||||||||    
T  40836350 catatttcccttatattagggggtcaaaagaacatatttccctaaaca--tggggtcacttttg 40836411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 46387744 - 46387807
Alignment:
Q  9 tcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||||||||||||||| ||| ||  |||| ||||| |||||||| |||||||||||||    
T  46387744 tcatatttcccttatgttaggggatcaaaagagcatgtttccttaaacatg-ggggtcacttttg 46387807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 48860835 - 48860714
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatattt 109  Q
    |||||||||||||||||||  ||||| ||  ||||||||||||||||||  ||||||| |||| | |       |||| | |||||||||||||| ||||    
T  48860835 catatttcccttatgttagaaggtcaaaatagcatatttccctaaacataaggggtcatttttatca-ttttttaataaggggtcaaaattacaacattt 48860737  T
Q  110 taaaatttaggggtcgaaaagtg 132  Q
    ||||| ||||||| || ||||||    
T  48860736 taaaacttagggggcgcaaagtg 48860714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 10743540 - 10743421
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatattt 109  Q
    |||||||||||||||||||||| | | | | ||||||||||||||||||  || ||||||||||| |       |||||| || ||||||  ||| ||||    
T  10743540 catatttcccttatgttaggggttaaaaga-gcatatttccctaaacatagggagtcacttttgtcatttttttaatagggggccaaaatcgcaacattt 10743442  T
Q  110 taaaatttaggggtcgaaaag 130  Q
    ||||| ||||||| |||||||    
T  10743441 taaaacttagggggcgaaaag 10743421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 13081027 - 13080964
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| | ||||| ||  ||||||||||||||| ||  |||||||||||||    
T  13081027 catatttcccttatgttatgaggtcaaaagagcatatttccctaaatatagggggtcacttttg 13080964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 25179711 - 25179648
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||| |||| |||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  25179711 catatttctcttacgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 25179648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 34878700 - 34878746
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaac 56  Q
    |||||||||||||| ||||||||||| ||  ||||||||||||||||    
T  34878700 catatttcccttatattagggggtcaaaagagcatatttccctaaac 34878746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 18388866 - 18388934
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    |||| |||||||  |||||| |||||||||| ||  |||||||||||| |||||| ||||||||||||||    
T  18388866 aagaacatatttatcttatggtagggggtcaaaagagcatatttcccttaacatg-ggggtcacttttgt 18388934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 26127077 - 26127138
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||| |||||||| |||||| ||   ||||||||||||||||  ||||||||||||||    
T  26127077 catatttcccctatgttagagggtcaaaataacatatttccctaaaca--tggggtcacttttg 26127138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 26177127 - 26177188
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||| |||||||| |||||| ||  |||||||||||| ||||  ||||||||||||||    
T  26177127 catatttcccctatgttagagggtcaaaatagcatatttccctgaaca--tggggtcacttttg 26177188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 32315051 - 32315003
Alignment:
Q  11 atatttcccttatgttagggggtcagaaatgcatatttccctaaacatg 59  Q
    |||||||||| |||||||||||||| ||   ||||||||||||||||||    
T  32315051 atatttccctcatgttagggggtcaaaagaacatatttccctaaacatg 32315003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 9e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 2058991 - 2059126
Alignment:
Q  8 atcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatat 107  Q
    ||||||||||||||||||||||| |||| ||  |||||||||||||||||||  ||||||||||||  |       |||||| |||||||||  ||| ||    
T  2058991 atcatatttcccttatgttagggtgtcaaaatagcatatttccctaaacatgaagggtcacttttgcca-ttttttaatagggggtcaaaatcgcaacat 2059089  T
Q  108 tttaaaatttaggggtcgaaaagtgcaatttaacctt 144  Q
    ||||||||||||||  |||||| ||||||||| ||||    
T  2059090 tttaaaatttagggagcgaaaaatgcaatttagcctt 2059126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 4013833 - 4013966
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaa 104  Q
    ||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||| |||||||||||||  |       |||||| || ||||||  |||    
T  4013833 aagatcatatttcccttatattagggggtcaaaagagcatatttccctaaacatg-ggggtcacttttgacatttttttaatagggggccaaaatcgcaa 4013931  T
Q  105 tattttaaaatttaggggtcgaaaagtgcaattta 139  Q
     ||||| ||| ||||||| ||||||||||| ||||    
T  4013932 cattttgaaacttaggggacgaaaagtgcagttta 4013966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 18791490 - 18791427
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  18791490 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 18791427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 22968325 - 22968388
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  22968325 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 22968388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 23820068 - 23820005
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  23820068 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 23820005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 26240094 - 26240024
Alignment:
Q  5 aagatcatatttcccttatgtta-gggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    ||||||||||||||||||||||| |||||||| ||  |||||||||| |||||||| ||||||||||||||    
T  26240094 aagatcatatttcccttatgttaagggggtcaaaagagcatatttccgtaaacatgaggggtcacttttgt 26240024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 3118812 - 3118749
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||   ||||||||||||    
T  3118812 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagagggtcacttttg 3118749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 24603494 - 24603431
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  24603494 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 24603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 34834058 - 34833995
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  34834058 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 34833995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 14572349 - 14572470
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatattt 109  Q
    ||||||||||||||||||||  |||| ||  ||||||||||||||||||  |||||||||||||  |       |||||| || ||||||| ||||||||    
T  14572349 catatttcccttatgttaggatgtcaaaagagcatatttccctaaacat-aggggtcacttttgccatttttttaatagggggccaaaattgcaatattt 14572447  T
Q  110 taaaatttaggggtcgaaaagtg 132  Q
    ||||| |||| || |||||||||    
T  14572448 taaaacttagagggcgaaaagtg 14572470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 31210927 - 31210863
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    |||||||||||||||||||| ||||| ||  |||||||| |||||||||  ||||||||||||||    
T  31210927 catatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcacttttgt 31210863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 4371030 - 4370968
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||| ||| ||  |||||||||||||||||||  ||||||||||||    
T  4371030 catatttcccttatgttagggg-tcaaaagagcatatttccctaaacatggagggtcacttttg 4370968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 4597576 - 4597639
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  ||||||| |||||    
T  4597576 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcatttttg 4597639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 8412891 - 8412828
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||| ||  ||||||||| ||||||||  |||||| ||||||    
T  8412891 catatttcccttatgttagggggtcaaaagagcatatttctctaaacatagggggtcgcttttg 8412828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 15298618 - 15298555
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| |||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  15298618 catattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 15298555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 18749299 - 18749362
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| | ||||| ||  ||||||||||||||||||  |||||||||||||    
T  18749299 catatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttg 18749362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 25819817 - 25819755
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||||||  | ||||||||||||||||  |||||||||||||    
T  25819817 catatttcccttatgttaggaggtcagaagagtatatttccctaaacat-aggggtcacttttg 25819755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 24051140 - 24051078
Alignment:
Q  11 atatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| ||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  24051140 atatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 24051078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 16415500 - 16415567
Alignment:
Q  8 atcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaa 76  Q
    |||||||||||||||||||||| ||||| ||    ||||||||||||||||  ||||||||||||||||    
T  16415500 atcatatttcccttatgttaggcggtcaaaagaatatatttccctaaacat-aggggtcacttttgtaa 16415567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 35102662 - 35102710
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacat 58  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||    
T  35102662 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 35102710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 26710478 - 26710541
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| |||||||||||| ||||| ||  ||||||||||||||||||  |||||| ||||||    
T  26710478 catattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcgcttttg 26710541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 32451859 - 32451796
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  |||||||||  |||||||  |||||||||||||    
T  32451859 catatttcccttatgttaggaggtcaaaagagcatatttctataaacatagggggtcacttttg 32451796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 12291584 - 12291614
Alignment:
Q  5 aagatcatatttcccttatgttagggggtca 35  Q
    |||||||||||||||||||||||||||||||    
T  12291584 aagatcatatttcccttatgttagggggtca 12291614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 19282382 - 19282503
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt-aannnnnnnaataggaggtcaaaattacaatatt 108  Q
    |||||||||||||||||||| | ||| ||  |||||||| | |||||||  |||||||||||||| |        |||||| |||||||||| |||||||    
T  19282382 catatttcccttatgttaggagttcaaaatagcatatttacttaaacataaggggtcacttttgtcattttttttaatagg-ggtcaaaattgcaatatt 19282480  T
Q  109 ttaaaatttaggggtcgaaaagt 131  Q
    |||||| ||| ||| ||||||||    
T  19282481 ttaaaacttacgggacgaaaagt 19282503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 34834170 - 34834230
Alignment:
Q  84 aataggaggtcaaaattacaatattttaaaatttaggggtcgaaaagtgcaatttaacctt 144  Q
    ||||||||||||||||  |||||||||||||  || ||| ||||||||||| |||| ||||    
T  34834170 aataggaggtcaaaatcgcaatattttaaaacataaggggcgaaaagtgcactttagcctt 34834230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 3403218 - 3403287
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    ||||||||||||||||||||||||||||||| ||  |||||||| |||| ||||| ||||||||||||||    
T  3403218 aagatcatatttcccttatgttagggggtcaaaagagcatattttcctatacatgaggggtcacttttgt 3403287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 15681735 - 15681666
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    ||||||||| ||||||||||||||||||||| ||  ||||||||||||||||||| || ||||| |||||    
T  15681735 aagatcatagttcccttatgttagggggtcaaaagagcatatttccctaaacatgaggtgtcacatttgt 15681666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 2331146 - 2331083
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  2331146 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 2331083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 20636752 - 20636689
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  20636752 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 20636689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 20638624 - 20638561
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  20638624 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 20638561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 21224523 - 21224586
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  21224523 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 21224586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 27869366 - 27869429
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  27869366 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 27869429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 35337693 - 35337756
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  35337693 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 35337756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 41452420 - 41452483
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||||||  | ||||||||||||||||  |||||||||||||    
T  41452420 catatttcccttatgttaggaggtcagaagagtatatttccctaaacataaggggtcacttttg 41452483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 42271465 - 42271402
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  42271465 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 42271402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 24464713 - 24464659
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatg 59  Q
    ||||||||||||||||||||||||||||||| ||   ||||||||||||||||||    
T  24464713 aagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacatg 24464659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 26126391 - 26126338
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatg 59  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  26126391 aagatcatatttcccttatgtta-ggggtcaaaaaagcatatttccctaaacatg 26126338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 18754437 - 18754485
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacat 58  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  18754437 catatttcccttatgttagggggtcaaaagagcatatttccctaaacat 18754485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 3562604 - 3562666
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  3562604 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttg 3562666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 6798083 - 6798134
Alignment:
Q  8 atcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatg 59  Q
    ||||||||||||||||||||| |||||| ||  |||||||||||||||||||    
T  6798083 atcatatttcccttatgttagagggtcaaaagagcatatttccctaaacatg 6798134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 19195384 - 19195447
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  || |||||||||||||||  |||||||||||||    
T  19195384 catatttcccttatgttaggaggtcaaaagagcgtatttccctaaacatagggggtcacttttg 19195447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 24597686 - 24597749
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  ||||| |||||||    
T  24597686 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggttacttttg 24597749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24448206 - 24448256
Alignment:
Q  1 tcataagatcatatttcccttatgttagggggtcagaaatgcatatttccc 51  Q
    |||||| | |||||||||||||||||||||||||| ||| |||||||||||    
T  24448206 tcataaaaacatatttcccttatgttagggggtcaaaaaagcatatttccc 24448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 4571510 - 4571563
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacat 58  Q
    ||||||||||||||||||||||| ||||| | ||  ||||||||||||||||||    
T  4571510 aagatcatatttcccttatgttatggggtaaaaagagcatatttccctaaacat 4571563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 26385395 - 26385331
Alignment:
Q  8 atcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||| ||||||||||||| ||| ||  |||||||||||||||||||  ||||||||||||    
T  26385395 atcatatttctcttatgttagggg-tcaaaatagcatatttccctaaacatgatgggtcacttttg 26385331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 17305897 - 17305835
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  |||||||| |||||||||  |||||||||||||    
T  17305897 catatttcccttatgttaggaggtcaaaagagcatattttcctaaacat-aggggtcacttttg 17305835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 31494043 - 31493981
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| ||||||||||| |||||| ||  ||||||||||||||||||  |||||||||||||    
T  31494043 catattttccttatgttagagggtcaaaagagcatatttccctaaacat-aggggtcacttttg 31493981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 44078042 - 44078091
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatg 59  Q
    |||||||| ||||||||||| ||||| ||  |||||||||||||||||||    
T  44078042 catatttctcttatgttaggaggtcaaaagagcatatttccctaaacatg 44078091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 21225719 - 21225766
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacat 58  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||||||    
T  21225719 catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat 21225766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 21810097 - 21810141
Alignment:
Q  95 aaaattacaatattttaaaatttaggggtcgaaaagtgcaattta 139  Q
    ||||| |||||||||||||| ||||||| ||||||||||| ||||    
T  21810097 aaaatcacaatattttaaaacttagggggcgaaaagtgcacttta 21810141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 36746674 - 36746722
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacat 58  Q
    |||||||| ||||||||||| ||||| ||  ||||||||||||||||||    
T  36746674 catatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 36746722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 39182179 - 39182239
Alignment:
Q  84 aataggaggtcaaaattacaatattttaaaatttaggggtcgaaaagtgcaatttaacctt 144  Q
    |||||| |||||||||| ||| ||||| ||| ||||||| ||||||||||| |||| ||||    
T  39182179 aatagggggtcaaaattgcaacatttttaaacttagggggcgaaaagtgcagtttagcctt 39182239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 48176134 - 48176181
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacat 58  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||||||    
T  48176134 catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat 48176181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 32400493 - 32400613
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatattt 109  Q
    |||||||||||||||||||||||||| ||  ||||||||| ||||||||  |||||||||||||  |       |||| ||||||||||||  || ||||    
T  32400493 catatttcccttatgttagggggtcaaaagcgcatatttcactaaacatagggggtcacttttgccatttttttaata-gaggtcaaaattgtaacattt 32400591  T
Q  110 taaaatttaggggtcgaaaagt 131  Q
    ||||||||||||| ||||||||    
T  32400592 taaaatttagggggcgaaaagt 32400613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 21666445 - 21666508
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||||| |||||||||||||    
T  21666445 catatttcccttatgttagggggtcaagagagcatatttccctaaacatggggggtcacttttg 21666508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 17648376 - 17648313
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  17648376 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 17648313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 19391558 - 19391621
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  19391558 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 19391621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 19924398 - 19924335
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||||||  | ||||||||||||||||  |||||||||||||    
T  19924398 catatttcccttatgttaggaggtcagaagagtatatttccctaaacatagggggtcacttttg 19924335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 30784435 - 30784498
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  30784435 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatacggggtcacttttg 30784498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 4519038 - 4519101
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| | ||| ||  ||||||||||||||||||  |||||||||||||    
T  4519038 catatttcccttatgttaggagatcaaaagagcatatttccctaaacatagggggtcacttttg 4519101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 21929974 - 21930036
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  21929974 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttg 21930036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 22452344 - 22452407
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||| || || |||||||||||    
T  22452344 catatttcccttatgttaggaggtcaaaagagcatatttccctaaatatatgaggtcacttttg 22452407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 33895507 - 33895444
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  ||| |||||||||    
T  33895507 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcacttttg 33895444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 44147104 - 44147042
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  44147104 catatttcccttatgttaggaggtcaaaatagcatatttccctaaacat-aggggtcacttttg 44147042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 38630188 - 38630126
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  || |||||||||    
T  38630188 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggagtcactttt 38630126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 1824742 - 1824677
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||| |||||||||| ||||||| ||  |||||||||||||||||  ||||||||||||||    
T  1824742 aagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaaca--tggggtcacttttg 1824677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 1859187 - 1859122
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||| |||||||||| ||||||| ||  |||||||||||||||||  ||||||||||||||    
T  1859187 aagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaaca--tggggtcacttttg 1859122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 8802572 - 8802633
Alignment:
Q  12 tatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| ||||| ||  ||||||||||||||||||   ||||||||||||    
T  8802572 tatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttg 8802633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 5192442 - 5192505
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| | ||||| ||  ||||||||||||||||||  | |||||||||||    
T  5192442 catatttcccttatgttaagaggtcaaaagagcatatttccctaaacataggaggtcacttttg 5192505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 12723432 - 12723495
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||| ||||||||  ||||||| |||||    
T  12723432 catatttcccttatgttaggaggtcaaaagagcatatttctctaaacatagggggtcatttttg 12723495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 22452220 - 22452169
Alignment:
Q  95 aaaattacaatattttaaaatttaggggtcgaaaagtgcaatttaaccttaa 146  Q
    |||||| ||| |||||||||| |||||| ||||||||||| |||||||||||    
T  22452220 aaaattgcaacattttaaaatatagggggcgaaaagtgcagtttaaccttaa 22452169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 18253056 - 18253117
Alignment:
Q  8 atcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    ||||||||||||||||||||  |||||| |||  ||||||||||||||||  |||||||||||||    
T  18253056 atcatatttcccttatgtta-tgggtcaaaaaaacatatttccctaaaca--tggggtcactttt 18253117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 4807771 - 4807835
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacat-gtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||   ||||||||| ||||||| | |||||||||||||    
T  4807771 catatttcccttatgttaggaggtcaaaagaacatatttccttaaacatagaggggtcacttttg 4807835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 25557046 - 25557167
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatattt 109  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||  |       |||||| |||||||||  ||| ||||    
T  25557046 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattt 25557145  T
Q  110 taaaatttaggggtcgaaaagt 131  Q
    | ||| ||||||| ||||||||    
T  25557146 tgaaacttagggggcgaaaagt 25557167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 26639208 - 26639271
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||||||||||    
T  26639208 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttg 26639271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 41663693 - 41663759
Alignment:
Q  8 atcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaa 76  Q
    |||||||||||||||||||| ||||||| ||  |||||||||||||||||  |||||||||||||||||    
T  41663693 atcatatttcccttatgttatggggtcaaaagagcatatttccctaaaca--tggggtcacttttgtaa 41663759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 245727 - 245595
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatattt 109  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||  |       |||||| || ||||||| ||||||||    
T  245727 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttgccatttttttaatagggggccaaaattgcaatattt 245629  T
Q  110 taaaatttaggggtcgaaaagtgcaatttaacct 143  Q
    | ||| |||| || ||||||||| | ||||||||    
T  245628 tgaaacttagagggcgaaaagtgaagtttaacct 245595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 31055485 - 31055548
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||||||  |||||||||||||    
T  31055485 catatttcccttatgttaaggggtcaaaagagcatatttccctaaacatagggggtcacttttg 31055548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 38476636 - 38476703
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||| ||  ||||||||||||    
T  38476636 aagatcatatttcccttatgttatggggtcaaaagagcatatttccctaaatatagggggtcactttt 38476703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 8645932 - 8645867
Alignment:
Q  8 atcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||| ||||| ||  ||||||||||||||||||  ||||||| |||||    
T  8645932 atcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacattgggggtcaattttg 8645867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 34125195 - 34125130
Alignment:
Q  7 gatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    |||||||||| |||||||||||||| ||| ||  |||||||||||||||||||  |||||||||||    
T  34125195 gatcatattttccttatgttaggggatcaaaagagcatatttccctaaacatgaagggtcactttt 34125130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 35302081 - 35302148
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||| | |||||||||||||||| ||  ||||||||||||||| ||| |||||||||||||    
T  35302081 aagatcatatttacattatgttagggggtcaaaagagcatatttccctaaatatg-ggggtcacttttg 35302148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 37961415 - 37961483
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||| |||||||||||||||| ||||| ||  || |||||||||||||||| ||| |||||||||    
T  37961415 aagatcatttttcccttatgttaggcggtcaaaagagcgtatttccctaaacatgggggatcacttttg 37961483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 41663574 - 41663522
Alignment:
Q  92 gtcaaaattacaatattttaaaatttaggggtcgaaaagtgcaatttaacctt 144  Q
    ||||||||| |||||||||||||||||||||||||||| || | |||||||||    
T  41663574 gtcaaaattgcaatattttaaaatttaggggtcgaaaaatgtagtttaacctt 41663522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 16901168 - 16901230
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  16901168 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttg 16901230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 18695136 - 18695074
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  18695136 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttg 18695074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 23040115 - 23040183
Alignment:
Q  5 aagatcatatttcccttatgttaggg--ggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||||||||||||||||   |||||||||||||    
T  23040115 aagatcatatttcccttatgttaggggaggtcaaaagagcatatttccctaaacat---gggtcacttttgt 23040183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 23765561 - 23765622
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  ||||||||||||    
T  23765561 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactttt 23765622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 23815409 - 23815470
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  ||||||||||||    
T  23815409 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactttt 23815470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 31648174 - 31648125
Alignment:
Q  24 gttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||| ||| ||||||||||||||||||  |||||||||||||    
T  31648174 gttagggggtcaaaaaagcatatttccctaaacataaggggtcacttttg 31648125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 16307647 - 16307711
Alignment:
Q  10 catatttcccttatgttaggggg-tcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| ||||||||||||||| ||| ||  ||||||||||||||||||  |||||||||||||    
T  16307647 catattttccttatgttaggggggtcaaaagagcatatttccctaaacatagggggtcacttttg 16307711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 10293258 - 10293321
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||| ||||||  ||||||| |||||    
T  10293258 catatttcccttatgttaggaggtcaaaagagcatatttcccaaaacatagggggtcatttttg 10293321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 20654040 - 20654095
Alignment:
Q  84 aataggaggtcaaaattacaatattttaaaatttaggggtcgaaaagtgcaattta 139  Q
    ||||||||| |||||| |||| ||||| ||| ||||||||||||||||||| ||||    
T  20654040 aataggaggccaaaatcacaacattttgaaacttaggggtcgaaaagtgcagttta 20654095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 23040209 - 23040273
Alignment:
Q  9 tcatatttcccttatgtta-gggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    ||||||||||||||||||| |||||||| ||  ||||||||||||||  || |||||||||||||||    
T  23040209 tcatatttcccttatgttaggggggtcaaaagagcatatttccctaa--atatggggtcacttttgt 23040273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 36641276 - 36641213
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||| ||||||||  ||| |||||||||    
T  36641276 catatttcccttatgttaggaggtcaaaagagcatatttctctaaacataggggctcacttttg 36641213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 17825664 - 17825732
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    |||| |||||||| ||||||||||||| ||| ||  ||||||||||||||||||| || ||||| |||||    
T  17825664 aagaacatatttctcttatgttagggg-tcaaaagagcatatttccctaaacatgaggtgtcacatttgt 17825732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 20653953 - 20653889
Alignment:
Q  9 tcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    ||||||||| ||||||||||||| ||| ||  |||||||||||||||||||   ||||||||||||    
T  20653953 tcatatttcacttatgttagggg-tcaaaagagcatatttccctaaacatgaaaggtcacttttgt 20653889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 1945 - 2008
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  1945 catatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggtcacttttg 2008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 4587994 - 4587931
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||||    
T  4587994 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 4587931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 2986819 - 2986755
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  ||||||||||||||    
T  2986819 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgt 2986755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 11176040 - 11175977
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  11176040 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 11175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 38716326 - 38716263
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||| ||||||||||| ||||| ||  |||||||||||||||||| ||||||||||||||    
T  38716326 catatttctcttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttg 38716263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 36464410 - 36464344
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||| ||||||||||||||||||||||||| ||   ||||||||||||||||  ||||||||||||||    
T  36464410 aagattatatttcccttatgttagggggtcaaaagatcatatttccctaaaca--tggggtcacttttg 36464344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 15700880 - 15700820
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactt 70  Q
    |||||||||||||||||||||||||| ||  ||||||||||| ||||||  ||||||||||    
T  15700880 catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 15700820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 6763888 - 6763951
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||| |||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  6763888 catattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 6763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 9051198 - 9051261
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  || ||||||||||    
T  9051198 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggagtcacttttg 9051261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 18537999 - 18538062
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||| |||||| | ||||| ||| ||||||||||||||||||  |||||||||||||    
T  18537999 catatttccctaatgttatgaggtcaaaaaagcatatttccctaaacatagggggtcacttttg 18538062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 22191179 - 22191116
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||||||||||||  |||| ||  ||||||||||||||||||  |||||||||||||    
T  22191179 catatttcccttatgttaggaagtcaaaagagcatatttccctaaacatagggggtcacttttg 22191116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 30714445 - 30714508
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||| ||||||  |||||||||||||    
T  30714445 catatttcccttatgttaggaggtcaaaagagcatatttcccgaaacatagggggtcacttttg 30714508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 9787692 - 9787573
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaannnnnnnaataggaggtcaaaattacaatattt 109  Q
    |||||||||||||||||||  ||||| ||  ||||||||||||||||||   ||||||||||||  |       |||||| |||||||||| ||| ||||    
T  9787692 catatttcccttatgttagcaggtcaaaagagcatatttccctaaacatagtgggtcacttttgccatttttttaatagggggtcaaaattgcaacattt 9787593  T
Q  110 taaaatttaggggtcgaaaa 129  Q
    |||||  |||||| ||||||    
T  9787592 taaaacatagggggcgaaaa 9787573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 43301792 - 43301724
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    |||||||||||||||||| |||||||| ||| ||   |||| |||||||||||| |||||||||||||||    
T  43301792 aagatcatatttcccttaagttagggg-tcaaaagaacatacttccctaaacatatggggtcacttttgt 43301724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 331845 - 331782
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||||| ||||| |||||| ||  |||||||||||||||||||   |||||||||||    
T  331845 catatttcccttaagttagagggtcaaaagagcatatttccctaaacatggaaggtcacttttg 331782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 15735197 - 15735134
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| | ||||| ||  ||||||||||| ||||||  |||||||||||||    
T  15735197 catatttcccttatgttacgaggtcaaaagagcatatttcccaaaacatagggggtcacttttg 15735134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 25298972 - 25299035
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||| |||||||| | ||||| ||  ||||||||||||||||||  |||||||||||||    
T  25298972 catatttcctttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttg 25299035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 12350256 - 12350305
Alignment:
Q  84 aataggaggtcaaaattacaatattttaaaatttaggggtcgaaaagtgc 133  Q
    ||||||||| ||||||  ||| ||||||||||||| ||||||||||||||    
T  12350256 aataggaggccaaaatcgcaacattttaaaatttacgggtcgaaaagtgc 12350305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 25884347 - 25884411
Alignment:
Q  8 atcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||| | | ||   |||||||| ||||||||| |||||||||||||    
T  25884347 atcatatttcccttatgttaggggattaaaataacatatttctctaaacatg-ggggtcacttttg 25884411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 25135 - 25197
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||  ||||||||||||    
T  25135 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 25197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 455068 - 454999
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    |||||| ||||||| |||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||    
T  455068 aagatcgtatttcctttatgttagggggttaaaagagcatatttccctaaacatggggggtcacttttgt 454999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 455164 - 455102
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtca 67  Q
    ||||||||||||||||||||||||||||| | ||   ||||||| |||||||||| |||||||    
T  455164 aagatcatatttcccttatgttagggggttaaaagaacatattttcctaaacatggggggtca 455102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 3739 - 3800
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||  ||||||||||||||    
T  3739 catatttcccttatgttagggggtcaaaagagcatatttccctaaaca--tggggtcacttttg 3800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 5820 - 5883
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  5820 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 5883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 112264 - 112193
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgtaa 76  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||||||  || | || |||||||||||    
T  112264 aagatcatatttcccttatgttaggaggtcaaaaaggcatatttccctaaatctgggaggacacttttgtaa 112193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 49792 - 49732
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactt 70  Q
    |||||||||||||||||||||||||| ||  ||||||||||| ||||||  ||||||||||    
T  49792 catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 49732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 62331 - 62271
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactt 70  Q
    |||||||||||||||||||||||||| ||  ||||||||||| ||||||  ||||||||||    
T  62331 catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 62271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 2220 - 2283
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||| ||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  2220 catattgcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 2283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 3131 - 3194
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  | |||||||||||    
T  3131 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttg 3194  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 61947 - 61884
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    ||||||||||||||||||||  |||| ||  ||||||||||||||||||  |||||||||||||    
T  61947 catatttcccttatgttaggatgtcaaaagagcatatttccctaaacatagggggtcacttttg 61884  T

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Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 19415 - 19354
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||||||  |||||||||||||    
T  19415 catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat-aggggtcacttttg 19354  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 142118 - 142180
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||||||    
T  142118 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttg 142180  T

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Target: scaffold0291 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 10058 - 9991
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttgt 74  Q
    |||||||||||| |||||||||| ||| ||| ||  |||||||||||||||||||  |||||||||||||    
T  10058 aagatcatattttccttatgttatggg-tcaaaagagcatatttccctaaacatg-agggtcacttttgt 9991  T

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Target: scaffold0150 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 5965 - 5916
Alignment:
Q  10 catatttcccttatgttag-ggggtcagaaatgcatatttccctaaacat 58  Q
    ||||||||||||||||||| ||||||| ||  ||||||||||||||||||    
T  5965 catatttcccttatgttaggggggtcaaaatagcatatttccctaaacat 5916  T

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Target: scaffold1875 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 923 - 990
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcacttttg 73  Q
    |||| ||||||| |||||||||||  ||||| ||  |||||| ||||||||||| ||||||||||||||    
T  923 aagagcatatttaccttatgttagaaggtcaaaatagcatatatccctaaacat-tggggtcacttttg 990  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 29853 - 29789
Alignment:
Q  5 aagatcatatttcccttatgttagggggtcagaaatgcatatttccctaaacatgtggggtcactttt 72  Q
    ||||||||||||||||||||||| ||||||  ||  ||||||||||| |||||  |||||||||||||    
T  29853 aagatcatatttcccttatgtta-ggggtccaaagagcatatttccccaaaca--tggggtcactttt 29789  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 66307 - 66259
Alignment:
Q  10 catatttcccttatgttagggggtcagaaatgcatatttccctaaacat 58  Q
    |||| ||||||||||||||| ||||| ||  ||||||||||||||||||    
T  66307 catagttcccttatgttaggaggtcaaaatagcatatttccctaaacat 66259  T

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