View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12534_high_7 (Length: 353)
Name: NF12534_high_7
Description: NF12534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12534_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 17 - 340
Target Start/End: Original strand, 7354813 - 7355136
Alignment:
| Q |
17 |
acaaggaacatttcagggttcactctatagttgtctagtgaaattaaatgtgtacactgcaaccgggaaaatcggaaatctttcaatattacgcaataag |
116 |
Q |
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| T |
7354813 |
acaaggaacatttcagggttcactctatagttgtctagtgaaattaaatgtgtacactgcaaccgggaaaatcggaaatctttcaatattacgcaataag |
7354912 |
T |
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| Q |
117 |
gatggatcatagatgtatctgttacaaaggtaaatgcaatatgaatctcagtcaacgcctaaattgctcaatttagttacagaatcagaatgtttaatta |
216 |
Q |
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| T |
7354913 |
gatggatcatagatgtatctgttacaaaggtaaatgcaatatgaatctcagtcaacgcctaaattgctcaatttagttacagaatcagaatgtttaatta |
7355012 |
T |
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| Q |
217 |
aggtcaaacgccacaatattcaagtggtatatttgtcagttttggataacacgttctcgttcttcacctcttcaaacatgcacattcttactagttaagc |
316 |
Q |
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| T |
7355013 |
acgtcaaacgccacaatattcaagtggtatatttgtcagttttggattacacgttctcgttcttcacctcttcaaacatgcacattcttactagttaagc |
7355112 |
T |
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| Q |
317 |
ttaggcttcttctaattcgcattc |
340 |
Q |
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|||||||||||||||||||||||| |
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| T |
7355113 |
ttaggcttcttctaattcgcattc |
7355136 |
T |
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