View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12534_low_10 (Length: 299)
Name: NF12534_low_10
Description: NF12534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12534_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 16 - 280
Target Start/End: Original strand, 13112840 - 13113104
Alignment:
| Q |
16 |
agagagagacacaagtgatgttgaatttcacggcgaagatccaaaggtaaggaaagcattatgccctcctcatctactcctcttgttgctagccatttat |
115 |
Q |
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| T |
13112840 |
agagagagacacaagtgatgctgaatttcacggcgaagatccaaaggtaaggaaagcattatgccctcctcatctactcctcttgttgctagccatttat |
13112939 |
T |
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| Q |
116 |
attgaacaaagcgacggacacgctcctgcaaatctggaggtaactgtcgatgcctcatccactcctctgtatctcttttccgaatcctccattcatctag |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
13112940 |
attgaacaaagcgacggacacgctcctgcaaatctggaggtaactgtcgatgcctcatccactcttctgtatctcttttccgaatcctccattcatctag |
13113039 |
T |
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| Q |
216 |
tctaaccgtcatcgattgcaggtatgtcttccacaagggaaatgtagtaaaaataaattcaaaat |
280 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13113040 |
tctaaccgtcatcgattgcaagtatgtcttccacaagggaaatgtagtaaaaataaattcaaaat |
13113104 |
T |
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