View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12535_high_14 (Length: 265)
Name: NF12535_high_14
Description: NF12535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12535_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 36202462 - 36202696
Alignment:
| Q |
13 |
gagaggttaaatgtttgtttacatatgtgacaacacttcttaagattaagacgcttagaaacaacaaatcttttcaaaatttgaattatcccttttcact |
112 |
Q |
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| T |
36202462 |
gagaggttaaatgtttgtttacatatgtgacaacacttcttaagattaaaacgcttagaaacaacaaatcttttcaaaatttgaattatcccttttcact |
36202561 |
T |
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| Q |
113 |
attttgcaacatagtaatatttatttgtttgtttccttaaccaaagcactaaaggcactcaactataattgtgcattcatgaattacctcattttgcaag |
212 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
36202562 |
attttgcaacatagtagtatttatttgtttgtttccttaaccaaagcactaaagacactcaactataattgtgcactcatgaattacctcattttgcaag |
36202661 |
T |
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| Q |
213 |
cgactagctgcagatttgtcatcagaagctcttaa |
247 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
36202662 |
cgactagctgcagatttgtcatcagaagctcttaa |
36202696 |
T |
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