View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12535_high_19 (Length: 239)
Name: NF12535_high_19
Description: NF12535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12535_high_19 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 5002851 - 5002628
Alignment:
| Q |
1 |
tttattttttagatggtttatcttctcttcttccttttttacctaagaaccctagttaccgtagttttcctagtagtagtaaaagagcctaacagacttc |
100 |
Q |
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| T |
5002851 |
tttattttttagatagtttatcttctcttcttccttttttacctaagaaccctagttaccatagttttcctagtagtagtaaaagagcctaacagacttc |
5002752 |
T |
|
| Q |
101 |
gatatccttaaattgcacttacaaaagattcaattacttgtaacacaagtttgatgtaattattaacaattaaattcaattacttgtactataagttagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5002751 |
gatatccttaaattgcacttacaaaagattcaattacttgtaacacaagtttgatgtaattattaacaattaaattcaattacttgtactataagttagt |
5002652 |
T |
|
| Q |
201 |
ttagttagctttctaagaccatct |
224 |
Q |
| |
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|||||||||||| ||||||||||| |
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| T |
5002651 |
ttagttagctttttaagaccatct |
5002628 |
T |
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