View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12536_low_5 (Length: 454)

Name: NF12536_low_5
Description: NF12536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12536_low_5
NF12536_low_5
[»] chr3 (40 HSPs)
chr3 (15-412)||(31402953-31403343)
chr3 (228-335)||(14548692-14548799)
chr3 (230-335)||(36646355-36646460)
chr3 (228-336)||(40880919-40881027)
chr3 (133-192)||(36646387-36646446)
chr3 (235-340)||(10540471-10540575)
chr3 (240-332)||(2923473-2923565)
chr3 (13-77)||(46030911-46030975)
chr3 (226-322)||(49465634-49465730)
chr3 (228-335)||(21574483-21574589)
chr3 (133-192)||(22214664-22214723)
chr3 (18-81)||(34235164-34235227)
chr3 (242-320)||(30923883-30923961)
chr3 (133-191)||(30923903-30923961)
chr3 (226-263)||(2321242-2321279)
chr3 (136-181)||(27290909-27290954)
chr3 (226-335)||(43115048-43115157)
chr3 (242-334)||(1816576-1816668)
chr3 (232-288)||(36338596-36338652)
chr3 (240-335)||(41724203-41724299)
chr3 (224-264)||(42537103-42537142)
chr3 (133-192)||(237403-237462)
chr3 (228-335)||(29113454-29113561)
chr3 (133-184)||(36200110-36200161)
chr3 (296-335)||(42753598-42753637)
chr3 (226-333)||(48588651-48588758)
chr3 (29-103)||(23815950-23816024)
chr3 (133-171)||(48597595-48597633)
chr3 (241-334)||(9279310-9279403)
chr3 (134-191)||(13709829-13709886)
chr3 (17-78)||(32095278-32095338)
chr3 (266-331)||(40122762-40122827)
chr3 (130-191)||(44284082-44284143)
chr3 (239-299)||(482774-482834)
chr3 (228-264)||(2606281-2606317)
chr3 (230-334)||(19679301-19679405)
chr3 (228-332)||(20467157-20467261)
chr3 (291-335)||(21872305-21872349)
chr3 (143-191)||(24887298-24887346)
chr3 (228-264)||(37273197-37273233)
[»] chr5 (38 HSPs)
chr5 (228-335)||(37526170-37526277)
chr5 (228-335)||(37588331-37588438)
chr5 (237-335)||(2880527-2880625)
chr5 (228-335)||(18704008-18704114)
chr5 (230-334)||(10272404-10272508)
chr5 (228-335)||(37690607-37690715)
chr5 (240-334)||(7674641-7674735)
chr5 (17-103)||(9202835-9202921)
chr5 (17-77)||(7674571-7674631)
chr5 (226-321)||(37611184-37611279)
chr5 (226-321)||(37787914-37788009)
chr5 (240-334)||(2568651-2568745)
chr5 (226-288)||(10125687-10125749)
chr5 (293-335)||(10391333-10391375)
chr5 (17-103)||(19460473-19460559)
chr5 (229-335)||(32172645-32172751)
chr5 (305-339)||(34245712-34245746)
chr5 (17-103)||(39105361-39105447)
chr5 (17-74)||(465880-465937)
chr5 (17-78)||(3566405-3566466)
chr5 (267-327)||(3947566-3947626)
chr5 (238-334)||(37794679-37794774)
chr5 (236-331)||(16889731-16889826)
chr5 (233-328)||(17368675-17368770)
chr5 (247-334)||(36318767-36318854)
chr5 (133-192)||(40205079-40205138)
chr5 (17-103)||(1465106-1465192)
chr5 (137-191)||(36638754-36638808)
chr5 (302-335)||(36539738-36539771)
chr5 (137-198)||(37611224-37611285)
chr5 (137-198)||(37787954-37788015)
chr5 (133-189)||(2468440-2468496)
chr5 (228-288)||(11297167-11297227)
chr5 (236-284)||(18700427-18700475)
chr5 (139-191)||(28586777-28586829)
chr5 (275-327)||(29659351-29659403)
chr5 (275-335)||(32194097-32194157)
chr5 (228-264)||(38047850-38047886)
[»] chr7 (34 HSPs)
chr7 (229-327)||(47427275-47427373)
chr7 (228-336)||(46281111-46281219)
chr7 (233-332)||(33645937-33646035)
chr7 (228-339)||(48157091-48157202)
chr7 (226-288)||(36598325-36598387)
chr7 (133-192)||(24363606-24363665)
chr7 (226-284)||(36537951-36538009)
chr7 (273-335)||(39505948-39506010)
chr7 (21-79)||(42656436-42656494)
chr7 (238-318)||(12234870-12234950)
chr7 (235-331)||(20553099-20553195)
chr7 (228-335)||(38010706-38010813)
chr7 (235-335)||(46082026-46082128)
chr7 (240-334)||(3610723-3610817)
chr7 (229-327)||(6601367-6601465)
chr7 (17-103)||(20881723-20881809)
chr7 (228-270)||(25422383-25422425)
chr7 (135-181)||(33885546-33885592)
chr7 (135-184)||(1710744-1710793)
chr7 (261-334)||(2825235-2825308)
chr7 (227-288)||(21247965-21248026)
chr7 (133-170)||(27496412-27496449)
chr7 (133-170)||(27503070-27503107)
chr7 (230-339)||(28165079-28165188)
chr7 (228-264)||(7453368-7453404)
chr7 (241-325)||(9423578-9423662)
chr7 (133-181)||(12234894-12234942)
chr7 (299-335)||(25507341-25507377)
chr7 (291-335)||(28340878-28340922)
chr7 (226-270)||(30134106-30134150)
chr7 (140-192)||(39505962-39506014)
chr7 (224-288)||(39551515-39551579)
chr7 (226-334)||(46104536-46104644)
chr7 (139-179)||(47527945-47527985)
[»] chr8 (45 HSPs)
chr8 (228-335)||(6509274-6509381)
chr8 (226-335)||(11415146-11415255)
chr8 (136-191)||(30277253-30277308)
chr8 (235-325)||(26473730-26473820)
chr8 (144-189)||(11188171-11188216)
chr8 (228-288)||(5069736-5069796)
chr8 (131-191)||(8062336-8062396)
chr8 (228-327)||(8060669-8060768)
chr8 (228-334)||(30600320-30600426)
chr8 (228-278)||(30987962-30988012)
chr8 (137-191)||(31705092-31705146)
chr8 (137-194)||(2458575-2458632)
chr8 (282-335)||(44865589-44865642)
chr8 (133-189)||(14949875-14949931)
chr8 (230-318)||(26479794-26479882)
chr8 (229-325)||(27645906-27646002)
chr8 (230-334)||(28769312-28769416)
chr8 (236-327)||(10079049-10079140)
chr8 (228-327)||(11569428-11569527)
chr8 (228-335)||(30191112-30191219)
chr8 (228-335)||(30389091-30389198)
chr8 (228-331)||(39551180-39551283)
chr8 (254-320)||(8536039-8536105)
chr8 (133-191)||(11415161-11415219)
chr8 (137-191)||(20672757-20672811)
chr8 (236-310)||(24258083-24258157)
chr8 (17-79)||(26215417-26215479)
chr8 (133-191)||(28769344-28769402)
chr8 (291-333)||(29973075-29973117)
chr8 (226-256)||(29973223-29973253)
chr8 (228-334)||(31862486-31862591)
chr8 (137-191)||(31862500-31862554)
chr8 (294-332)||(34770887-34770925)
chr8 (228-270)||(40071806-40071848)
chr8 (234-335)||(11183537-11183638)
chr8 (124-192)||(29973087-29973156)
chr8 (267-335)||(8062516-8062584)
chr8 (133-189)||(25869271-25869327)
chr8 (275-327)||(30277263-30277315)
chr8 (275-335)||(31705077-31705137)
chr8 (228-264)||(31875566-31875602)
chr8 (231-335)||(31884586-31884688)
chr8 (235-327)||(34290869-34290961)
chr8 (160-192)||(34770898-34770930)
chr8 (247-331)||(43504747-43504831)
[»] chr6 (34 HSPs)
chr6 (228-335)||(281819-281926)
chr6 (17-101)||(264270-264354)
chr6 (237-335)||(2117395-2117493)
chr6 (228-317)||(2460122-2460211)
chr6 (133-184)||(281853-281904)
chr6 (236-335)||(4006706-4006805)
chr6 (228-314)||(29957893-29957979)
chr6 (17-78)||(9093643-9093704)
chr6 (224-257)||(34939583-34939616)
chr6 (295-335)||(2727894-2727934)
chr6 (235-335)||(30523652-30523751)
chr6 (228-288)||(33832244-33832304)
chr6 (18-69)||(103384-103435)
chr6 (226-321)||(2205560-2205654)
chr6 (230-288)||(2455298-2455357)
chr6 (236-335)||(7148658-7148757)
chr6 (230-317)||(34538191-34538278)
chr6 (133-184)||(34939758-34939809)
chr6 (232-278)||(740861-740907)
chr6 (226-264)||(32577955-32577993)
chr6 (305-334)||(415297-415326)
chr6 (244-313)||(2460930-2460999)
chr6 (230-335)||(4246402-4246507)
chr6 (17-102)||(9559628-9559713)
chr6 (230-319)||(10616514-10616603)
chr6 (235-288)||(22743520-22743573)
chr6 (224-257)||(24782261-24782294)
chr6 (235-335)||(8183137-8183237)
chr6 (228-288)||(9027617-9027677)
chr6 (17-69)||(24476533-24476585)
chr6 (230-278)||(27693412-27693460)
chr6 (239-335)||(28088205-28088300)
chr6 (228-264)||(32917260-32917296)
chr6 (236-288)||(33498658-33498710)
[»] chr4 (34 HSPs)
chr4 (240-334)||(6978945-6979039)
chr4 (228-335)||(2996565-2996672)
chr4 (247-334)||(6466036-6466123)
chr4 (133-179)||(29467629-29467675)
chr4 (228-317)||(27123323-27123412)
chr4 (111-182)||(32799723-32799794)
chr4 (21-83)||(6364066-6364128)
chr4 (240-331)||(24370934-24371027)
chr4 (135-192)||(18019978-18020035)
chr4 (226-335)||(45128279-45128388)
chr4 (136-184)||(19429723-19429771)
chr4 (226-318)||(23676706-23676797)
chr4 (17-84)||(3155519-3155586)
chr4 (133-192)||(6978967-6979026)
chr4 (259-334)||(7694012-7694087)
chr4 (133-192)||(11264307-11264366)
chr4 (17-64)||(56480284-56480331)
chr4 (237-327)||(1965941-1966031)
chr4 (137-191)||(7694019-7694073)
chr4 (230-288)||(19395044-19395102)
chr4 (241-331)||(24929489-24929579)
chr4 (233-335)||(30207547-30207649)
chr4 (228-270)||(52419589-52419631)
chr4 (18-83)||(2987106-2987171)
chr4 (133-182)||(5131255-5131304)
chr4 (244-313)||(27124131-27124200)
chr4 (139-192)||(30207582-30207635)
chr4 (235-288)||(50471223-50471276)
chr4 (228-328)||(6987712-6987812)
chr4 (291-335)||(8468940-8468984)
chr4 (136-192)||(11158365-11158421)
chr4 (17-101)||(26520316-26520400)
chr4 (228-264)||(27725277-27725313)
chr4 (291-335)||(42866060-42866104)
[»] chr2 (30 HSPs)
chr2 (240-334)||(40158711-40158805)
chr2 (228-321)||(15120189-15120282)
chr2 (131-184)||(3973549-3973602)
chr2 (228-332)||(33942145-33942251)
chr2 (228-278)||(4550796-4550846)
chr2 (230-335)||(1742005-1742110)
chr2 (135-192)||(3059281-3059338)
chr2 (259-335)||(39983334-39983410)
chr2 (17-69)||(42907290-42907342)
chr2 (111-182)||(5781685-5781756)
chr2 (111-158)||(6547942-6547989)
chr2 (228-335)||(6993695-6993802)
chr2 (228-335)||(22681156-22681263)
chr2 (228-299)||(41032926-41032997)
chr2 (17-80)||(42420381-42420444)
chr2 (133-191)||(1939337-1939395)
chr2 (137-191)||(10198489-10198543)
chr2 (133-191)||(32821816-32821874)
chr2 (228-334)||(35485910-35486016)
chr2 (17-79)||(39567824-39567886)
chr2 (275-339)||(7103500-7103565)
chr2 (60-105)||(12795677-12795722)
chr2 (235-288)||(14316123-14316176)
chr2 (292-333)||(33502703-33502744)
chr2 (236-317)||(41809224-41809305)
chr2 (228-264)||(9478362-9478398)
chr2 (17-69)||(23747235-23747287)
chr2 (228-335)||(30552614-30552722)
chr2 (133-189)||(34652041-34652097)
chr2 (228-288)||(35555166-35555226)
[»] chr1 (34 HSPs)
chr1 (231-324)||(15437966-15438059)
chr1 (226-335)||(15581246-15581355)
chr1 (228-335)||(25005766-25005875)
chr1 (224-325)||(27963337-27963438)
chr1 (230-334)||(3924617-3924721)
chr1 (228-288)||(4481969-4482029)
chr1 (236-319)||(43722137-43722220)
chr1 (230-332)||(1662568-1662670)
chr1 (237-335)||(25479573-25479671)
chr1 (230-335)||(3224415-3224520)
chr1 (230-327)||(27140478-27140575)
chr1 (133-189)||(6279408-6279464)
chr1 (228-300)||(6976952-6977023)
chr1 (226-326)||(7356507-7356606)
chr1 (267-335)||(42556641-42556709)
chr1 (226-270)||(49521774-49521818)
chr1 (232-327)||(23407431-23407526)
chr1 (228-327)||(33185929-33186027)
chr1 (17-56)||(33339507-33339546)
chr1 (235-318)||(43029380-43029463)
chr1 (133-192)||(45205074-45205133)
chr1 (17-103)||(9572195-9572281)
chr1 (228-335)||(28689423-28689532)
chr1 (230-335)||(6262731-6262835)
chr1 (236-313)||(11639395-11639472)
chr1 (135-192)||(47598428-47598485)
chr1 (275-335)||(6659506-6659566)
chr1 (133-189)||(12477292-12477348)
chr1 (291-335)||(15361705-15361749)
chr1 (144-192)||(25479587-25479635)
chr1 (262-334)||(27820342-27820414)
chr1 (228-288)||(29635386-29635446)
chr1 (137-193)||(35925695-35925751)
chr1 (230-270)||(37241624-37241664)
[»] scaffold0608 (1 HSPs)
scaffold0608 (228-288)||(9608-9668)
[»] scaffold0003 (2 HSPs)
scaffold0003 (239-324)||(306329-306414)
scaffold0003 (136-192)||(306332-306388)
[»] scaffold0159 (1 HSPs)
scaffold0159 (111-182)||(27017-27088)


Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 15 - 412
Target Start/End: Complemental strand, 31403343 - 31402953
Alignment:
Q  15 attttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaataa----------- 103  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||               
T  31403343 attttaacttcattttatcttttgatatggaaatagcttatatataagtgcttatgatgataagcacttgggctagaaactgcaaataacctgtttatcc 31403244  T
Q  104 --acagggtctgtttgagagagcttacgtcgtgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaaattgatgat 201  Q
      |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  31403243 aaacagggtctgtttgagagagcttatgtcatgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaaatcaatgat 31403144  T
Q  202 cagcttataatgaagcttttataaattgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctct 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  31403143 cagcttataatgaagcttttataaattgtttgagagagcttatggaaacaacttattacatgtctataaggtattttaagcttagttagataaactctct 31403044  T
Q  302 agaatagcttataaaaacaacttatagcttatattaaataagcctgagtttagttaaacttttattttagaaataactcataactaaacacttataaaag 401  Q
    |||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31403043 agaatagct--------------------tatattaaataagcctgagtttagttaaacttttattttagaaataactcataactaaacacttataaaag 31402964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 14548692 - 14548799
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||||||||||||||| ||||||| ||| |||| || ||| | | |||| |||||||||  |||| ||||| |||||| ||||| |||||||||||||    
T  14548692 tgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttata 14548791  T
Q  328 gcttatat 335  Q
    ||||||||    
T  14548792 gcttatat 14548799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 335
Target Start/End: Original strand, 36646355 - 36646460
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    |||| |||||||||||||||| ||||||  |||||  ||||| | |||| | |||||||  ||||||||||||| ||||||||| ||||||| ||||| |    
T  36646355 tttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagttataac 36646454  T
Q  330 ttatat 335  Q
    ||||||    
T  36646455 ttatat 36646460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 336
Target Start/End: Original strand, 40880919 - 40881027
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||||||||||||||| ||||||||||| |||||    |||| | |||||| |||||||  ||||  ||||||| |||| |||| ||||||| |||||    
T  40880919 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 40881018  T
Q  328 gcttatatt 336  Q
    |||||||||    
T  40881019 gcttatatt 40881027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 36646387 - 36646446
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    ||||||||||||||||||| |||||| | || |||||||||||||||||||| |||||||    
T  36646387 tgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaa 36646446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 340
Target Start/End: Original strand, 10540471 - 10540575
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    |||||||||||||||||| |||| ||||||||| ||  | |||| || ||||||  | || ||||||| |||||||||| |||||||||||||| |||||    
T  10540471 gagagcttatggaaacaatttatgacatgtttacaatttttttttaggttattttcacaacctctcta-aatagcttatgaaaacaacttatagtttata 10540569  T
Q  335 ttaaat 340  Q
    | ||||    
T  10540570 taaaat 10540575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 332
Target Start/End: Complemental strand, 2923565 - 2923473
Alignment:
Q  240 cttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagctta 332  Q
    ||||| ||||||||||| |||||||  ||||| |||||| |||||||||| |||| ||||  ||  |||||||| |||||| |||||||||||    
T  2923565 cttatagaaacaacttactacatgtccataagttatttttagcttatttatataatctcttcagtgtagcttatgaaaacagcttatagctta 2923473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 46030975 - 46030911
Alignment:
Q  13 caattttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataa 77  Q
    |||||||||||| ||||||||||||  ||| |||||||||||||| |||||| |||| |||||||    
T  46030975 caattttaactttattttatctttttctatcgaaatagcttatatataagtgtttatcatgataa 46030911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 49465634 - 49465730
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaac 322  Q
    |||||||  |||| |||||| ||||| ||||||||||||| || |||| ||||||||||||||  ||||  |||| || ||||||||| ||||||||    
T  49465634 attgtttcggagaacttatgaaaacagcttattacatgttcattaggttttttaagcttatttccataagttctccagtatagcttatgaaaacaac 49465730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 21574589 - 21574483
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||| ||||||||||| ||||||||||| ||||||| ||||| |  ||| |||||||||  |||| ||||| |   ||||||||||||| || |||||    
T  21574589 tgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaa-aagttata 21574491  T
Q  328 gcttatat 335  Q
    ||||||||    
T  21574490 gcttatat 21574483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 22214664 - 22214723
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||||||||||||||||||||||||| || | |  ||||||||||||||||| |||||||    
T  22214664 tgtccataagctgttttcagcttatttccgtaatgtctctaggatagcttatgaaaacaa 22214723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 34235164 - 34235227
Alignment:
Q  18 ttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcac 81  Q
    ||||||| ||||||| ||||| |||||||||||||| ||  ||||||||||| |||||||||||    
T  34235164 ttaactttattttatattttgctatggaaatagcttctacataagtgcttatcatgataagcac 34235227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 30923883 - 30923961
Alignment:
Q  242 tatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaaca 320  Q
    |||||||||| ||||| |||||| |||||| | |||| |||||||||  ||||||||||||| |||| |||| ||||||    
T  30923883 tatggaaacagcttatgacatgtctataagctgttttcagcttatttctataaactctctaggataggttatgaaaaca 30923961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 30923903 - 30923961
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||| ||||||||||||||||||||| | || ||||||||||||||| |||| ||||||    
T  30923903 tgtctataagctgttttcagcttatttctataaactctctaggataggttatgaaaaca 30923961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 2321279 - 2321242
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatg 263  Q
    |||||||||||||| |||||||||||||||||||||||    
T  2321279 attgtttgagagagtttatggaaacaacttattacatg 2321242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 27290909 - 27290954
Alignment:
Q  136 ccataagctgttttcagcttattaccatgaactctctaggatagct 181  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||    
T  27290909 ccataagctgttttcagcttatttccatgaactctgcaggatagct 27290954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 43115157 - 43115048
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    ||||||||  |||| ||||||||||||||||| ||||||  ||||  | |||| |||||||||  |||| ||||| |  |||| | || |||||||||||    
T  43115157 attgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagttcatgaaaacaactta 43115058  T
Q  326 tagcttatat 335  Q
    ||||||||||    
T  43115057 tagcttatat 43115048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 334
Target Start/End: Complemental strand, 1816668 - 1816576
Alignment:
Q  242 tatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    |||| ||| ||||||| |||| || ||| | | |||| ||||||||| ||||| ||||| || ||||||||| ||||||||||||| ||||||    
T  1816668 tatgaaaataacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttata 1816576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 36338652 - 36338596
Alignment:
Q  232 tgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    |||||||||||| | ||||| ||||| ||||||||||||| ||||||| ||||||||    
T  36338652 tgagagagcttacgaaaacagcttatgacatgtttataagatattttatgcttattt 36338596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 335
Target Start/End: Complemental strand, 41724299 - 41724203
Alignment:
Q  240 cttatggaaacaacttattacatgtttataaggtattttaagctta-tttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||||||||||||||||| ||||||  ||||| | |||| |||||| |||| |||| ||||| || |||||| || ||||||  |||||||||||||    
T  41724299 cttatggaaacaacttatgacatgtccataagttgttttcagcttattttatataagctctcaaggatagctgatgaaaacagtttatagcttatat 41724203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 42537142 - 42537103
Alignment:
Q  224 aaattgtttgagagagcttatggaaacaacttattacatgt 264  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  42537142 aaattgtttgag-gagcttatggaaacaacttattacatgt 42537103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 237462 - 237403
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||||||||||||||||||||||||| || | | |||| ||||||| ||||| |||||||    
T  237462 tgtccataagctgttttcagcttatttccgtaagctctataggataacttatgaaaacaa 237403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 29113561 - 29113454
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||||||||||||  |||||||||||| |||||  |||||| |||||| |  ||||||  |||| || ||||| | ||||||| || | || |||||    
T  29113561 tgtttgagagagcttacagaaacaacttataacatgcctataagctattttcattttattttcataagctttctaggacagcttatgaacaaaatttata 29113462  T
Q  328 gcttatat 335  Q
    ||||||||    
T  29113461 gcttatat 29113454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 36200161 - 36200110
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttat 184  Q
    |||||||||| ||||||||||||||| |||||| ||||  ||||||||||||    
T  36200161 tgtccataagttgttttcagcttatttccatgagctctacaggatagcttat 36200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 42753637 - 42753598
Alignment:
Q  296 ctctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  42753637 ctctctaggatagcttgtaaaaacaacttatagcttatat 42753598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 333
Target Start/End: Complemental strand, 48588758 - 48588651
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    |||| ||||||||||||||  ||||||||||| |||||||  ||| || |||| |||| ||||  | ||||||||    || |||||| |||||||||||    
T  48588758 attgcttgagagagcttatataaacaacttatgacatgttcttaaagtgttttcagctaatttccacaaactctccgttatggcttattaaaacaactta 48588659  T
Q  326 tagcttat 333  Q
    ||||||||    
T  48588658 tagcttat 48588651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 23816024 - 23815950
Alignment:
Q  29 ttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaataa 103  Q
    |||||||||  ||| |||||| ||||||  ||||||||||| ||||||||||||| ||||| ||  |||||||||    
T  23816024 ttatcttttattatagaaataacttatacataagtgcttatcatgataagcactttggctataagatgcaaataa 23815950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 48597595 - 48597633
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctc 171  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  48597595 tgtccatatgctgttttcagcttatttccatgaactctc 48597633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 9279310 - 9279403
Alignment:
Q  241 ttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    ||||||||||| ||||| |||||| |||||| | |||| |||||||||   ||||||||  |  |||| |||| |||||||| |||||||||||    
T  9279310 ttatggaaacagcttataacatgtatataagctgttttcagcttatttccttaaactcttcatgatagtttatgaaaacaacatatagcttata 9279403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 13709829 - 13709886
Alignment:
Q  134 gtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    ||||||||| ||||||||| ||||| | || ||||||| |||||||||||| ||||||    
T  13709829 gtccataagttgttttcagtttatttcaataaactctccaggatagcttatgaaaaca 13709886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 32095278 - 32095338
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataag 78  Q
    |||||||| ||||||||||||| ||| |||||| ||||||| | ||||||||| ||||||||    
T  32095278 tttaacttaattttatcttttgttatagaaataacttatatatgagtgcttat-atgataag 32095338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 40122762 - 40122827
Alignment:
Q  266 tataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagctt 331  Q
    |||||| | |||| |||||||||  || |||| | ||| |||||||||||||||||||||||||||    
T  40122762 tataagttgtttttagcttatttccattaactttttaggatagcttataaaaacaacttatagctt 40122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 44284082 - 44284143
Alignment:
Q  130 tcgtgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||| |||||||||| ||||||||||||| | || | ||||| |||||||||||| ||||||    
T  44284082 tcgtatccataagctattttcagcttatttctataagctctccaggatagcttatgaaaaca 44284143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 482774 - 482834
Alignment:
Q  239 gcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactct 299  Q
    ||||||||||||||||||| ||||| | ||| | |||||| |||||||||  |||||||||    
T  482774 gcttatggaaacaacttataacatgctcatatgatattttcagcttatttccataaactct 482834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 2606281 - 2606317
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgt 264  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  2606281 tgtttgagagatcttatggaaacaacttatgacatgt 2606317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 334
Target Start/End: Original strand, 19679301 - 19679405
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    ||||||||| |||| | ||||||||||| ||||| | | ||| | |||  |||||||||   | ||||||| |  |||| ||||||||||||||||||||    
T  19679301 tttgagagaacttacgaaaacaacttatgacatgctaaaaagctgtttgcagcttatttcttttaactctccaagatagtttataaaaacaacttatagc 19679400  T
Q  330 ttata 334  Q
    |||||    
T  19679401 ttata 19679405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 332
Target Start/End: Original strand, 20467157 - 20467261
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||||||||||| |||||||||  |||| ||||||| ||| | | ||||  ||| |||| || || ||| |||| ||| ||||| |||||| ||||||    
T  20467157 tgtttgagagagctaatggaaacagtttatgacatgttcatatgctgttttcggctaattttgacaagctcgctaggatatcttatgaaaacagcttata 20467256  T
Q  328 gctta 332  Q
    |||||    
T  20467257 gctta 20467261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 21872305 - 21872349
Alignment:
Q  291 ataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    ||||||| || || ||||||||| |||||||||||||||||||||    
T  21872305 ataaactttccaggatagcttatgaaaacaacttatagcttatat 21872349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 24887298 - 24887346
Alignment:
Q  143 ctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||||||||||||||| |||| | ||||| |||||||||||| ||||||    
T  24887298 ctgttttcagcttattcccataagctctccaggatagcttatgaaaaca 24887346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 37273233 - 37273197
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgt 264  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  37273233 tgtttgggagagcttatggaaacaacttatgacatgt 37273197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 37526170 - 37526277
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||||||||||||||| | ||||| ||| ||||||| ||||| | |||| |||||||||  |||| ||||| |||| | ||||| |||||||||||||    
T  37526170 tgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaacaacttata 37526269  T
Q  328 gcttatat 335  Q
    ||||||||    
T  37526270 gcttatat 37526277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 37588331 - 37588438
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||||||||||||||| | ||||| ||| | ||||| ||||| | |||| |||||||||  |||| ||||| |||||| ||||| |||||||||||||    
T  37588331 tgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttata 37588430  T
Q  328 gcttatat 335  Q
    ||||||||    
T  37588431 gcttatat 37588438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 335
Target Start/End: Original strand, 2880527 - 2880625
Alignment:
Q  237 gagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    ||||||||||||||| || || | ||||| ||||||| |||| |||||||||  |||||||||   |||||||||||||||||||||||||| ||||||    
T  2880527 gagcttatggaaacagctaatgatatgttcataaggtgttttcagcttatttccataaactcttctgaatagcttataaaaacaacttatagattatat 2880625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 18704008 - 18704114
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||| |||||||||||| ||||||||||| |||||| |||||| | |||| |||||||||  ||||  ||| |  |||||||||| |||||||||||||    
T  18704008 tgtttaagagagcttatg-aaacaacttataacatgtctataagttgttttcagcttatttccataagatctttgtaatagcttatgaaaacaacttata 18704106  T
Q  328 gcttatat 335  Q
    ||||||||    
T  18704107 gcttatat 18704114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 334
Target Start/End: Original strand, 10272404 - 10272508
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    |||| ||| |||||| |||||||||||| |||||| | |||| | |||| |||||||||  |||||||||| |  || |||||| |||||||||||||||    
T  10272404 tttgggagtgcttatagaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagc 10272503  T
Q  330 ttata 334  Q
    |||||    
T  10272504 ttata 10272508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 37690607 - 37690715
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagc-ttataaaaacaacttat 326  Q
    |||||||||||||||||| | ||||| ||| ||||||| ||||| | |||| |||||||||  |||| ||||| | |||| | |||| ||||||||||||    
T  37690607 tgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaaacaacttat 37690706  T
Q  327 agcttatat 335  Q
    |||||||||    
T  37690707 agcttatat 37690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 7674735 - 7674641
Alignment:
Q  240 cttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    |||||||||||||||||| ||||||||||||||| |||| |||||||||  | ||| |||| |  ||||||||| ||||||  |||| |||||||    
T  7674735 cttatggaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaacattttatggcttata 7674641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 9202835 - 9202921
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaataa 103  Q
    |||||||| ||||||||||||| ||  |||||||||||||| ||||  ||||| ||||||| |||||| |||| || ||||||||||    
T  9202835 tttaactttattttatcttttgctacagaaatagcttatatataagcacttatcatgataaacacttgtgctataagctgcaaataa 9202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 7674631 - 7674571
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataa 77  Q
    ||||| || ||||||||||||| ||| |||||||||||||| ||||||||||| |||||||    
T  7674631 tttaaatttattttatcttttggtatagaaatagcttatatataagtgcttatcatgataa 7674571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 321
Target Start/End: Original strand, 37611184 - 37611279
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaa 321  Q
    |||||||||||||||||||| ||||||||| | ||||||| ||||| | |||| || ||||||  |||| ||||| |  ||||||||| |||||||    
T  37611184 attgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaa 37611279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 321
Target Start/End: Original strand, 37787914 - 37788009
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaa 321  Q
    |||||||||||||||||||| ||||||||| | ||||||| ||||| | |||| || ||||||  |||| ||||| |  ||||||||| |||||||    
T  37787914 attgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaa 37788009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 2568745 - 2568651
Alignment:
Q  240 cttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    |||||| ||||| ||||| |||| || ||||| |||||| |||||||||  || | ||||| |  ||||||||| ||||||||||||||||||||    
T  2568745 cttatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttata 2568651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 10125687 - 10125749
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||| ||||||| |||||| ||||||||||| ||||||| ||||||| |||| |||||||||    
T  10125687 attgtctgagagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattt 10125749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 10391375 - 10391333
Alignment:
Q  293 aaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  10391375 aaactctctaggatagcttataaaaacaaattatagcttatat 10391333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 19460473 - 19460559
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaataa 103  Q
    |||||||| |||  || ||||||||| ||||||| |||||  ||||||||||| |||||||||| ||| |||| || ||||||||||    
T  19460473 tttaactttattcaatgttttgatatagaaatagtttatacataagtgcttatcatgataagcatttgtgctataagctgcaaataa 19460559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 32172751 - 32172645
Alignment:
Q  229 gtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatag 328  Q
    ||||| ||||||||||||||||||||||| ||||||  |||||  ||||| |||||||||  || |  |||  |  ||||||||| |||||| |||||||    
T  32172751 gtttgggagagcttatggaaacaacttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatgaaaacagcttatag 32172652  T
Q  329 cttatat 335  Q
    |||||||    
T  32172651 cttatat 32172645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 34245746 - 34245712
Alignment:
Q  305 atagcttataaaaacaacttatagcttatattaaa 339  Q
    |||||||||||||||||||||||||||||||||||    
T  34245746 atagcttataaaaacaacttatagcttatattaaa 34245712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 39105447 - 39105361
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaataa 103  Q
    ||||||||||||| || ||| | ||| |||||||||||||  |||| |||||| |||||||||||||  |||| || ||||||||||    
T  39105447 tttaacttcatttcatatttagctatagaaatagcttatacataagcgcttatcatgataagcacttatgctataagctgcaaataa 39105361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 465937 - 465880
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatga 74  Q
    |||||||| |||||||||||||  || |||||||||||||| ||||||||||| ||||    
T  465937 tttaactttattttatcttttgtcatagaaatagcttatatataagtgcttatcatga 465880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 3566405 - 3566466
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataag 78  Q
    |||||||| ||||| ||||| | ||| ||||||||||||| |||||||||||| ||||||||    
T  3566405 tttaactttattttctctttgggtatagaaatagcttataggtaagtgcttatcatgataag 3566466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 3947566 - 3947626
Alignment:
Q  267 ataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||| |||| |||||||||  |||| ||| ||||||||||||||||||||| ||||||    
T  3947566 ataaggtgtttttagcttattttcataatctcgctagaatagcttataaaaacagcttata 3947626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 334
Target Start/End: Original strand, 37794679 - 37794774
Alignment:
Q  238 agcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    |||||||| ||||||||||| ||||||| ||||| | |||| ||||||||| ||| |||||| ||| |||||| || |||| ||  |||||||||||    
T  37794679 agcttatgaaaacaacttatgacatgttcataagctgttttgagcttatttcgat-aactctataggatagctcatgaaaataatctatagcttata 37794774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 331
Target Start/End: Complemental strand, 16889826 - 16889731
Alignment:
Q  236 agagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagctt 331  Q
    |||| ||||| ||||| |||||   |||| |||||| | |||| || ||||||  ||||||||||||| ||||||||| |||||| ||||||||||    
T  16889826 agagattatgaaaacagcttatactatgtctataagttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttatagctt 16889731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 328
Target Start/End: Complemental strand, 17368770 - 17368675
Alignment:
Q  233 gagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatag 328  Q
    |||||| |||||| ||||||||||| ||||||| ||| |   |||| |||||||||  |||| ||||| |  ||||||||| ||||||||||||||    
T  17368770 gagagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatag 17368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 334
Target Start/End: Complemental strand, 36318854 - 36318767
Alignment:
Q  247 aaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    |||||||||||||||| ||  |||| | |||| |||||||||| ||||| |||| |  ||||||||| ||||||||||| | ||||||    
T  36318854 aaacaacttattacatcttgttaagctgttttcagcttatttacataaattctccaagatagcttatgaaaacaacttaaaacttata 36318767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 40205079 - 40205138
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    ||||||||| |||||||||||||||| | || | ||||| |||||||||||| |||||||    
T  40205079 tgtccataatctgttttcagcttatttctataagctctccaggatagcttatgaaaacaa 40205138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 1465106 - 1465192
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaataa 103  Q
    |||||||| |||||||| | || ||| |||||||||||||  |||| ||||||  ||||||||||||  |||| ||||||| |||||    
T  1465106 tttaactttattttatcctatgctatagaaatagcttatacataagcgcttatcttgataagcacttatgctataaactgcgaataa 1465192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 36638808 - 36638754
Alignment:
Q  137 cataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||||||| ||||||||||||| |||| | |||||||||||| ||||| ||||||    
T  36638808 cataagcttttttcagcttatttccataagctctctaggataacttatgaaaaca 36638754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 36539771 - 36539738
Alignment:
Q  302 agaatagcttataaaaacaacttatagcttatat 335  Q
    |||||| |||||||||||||||||||||||||||    
T  36539771 agaataacttataaaaacaacttatagcttatat 36539738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 37611224 - 37611285
Alignment:
Q  137 cataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaaattgat 198  Q
    |||||||||||||||| ||||| |||| | ||||| | |||||||||| ||||||| |||||    
T  37611224 cataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaatttgat 37611285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 37787954 - 37788015
Alignment:
Q  137 cataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaaattgat 198  Q
    |||||||||||||||| ||||| |||| | ||||| | |||||||||| ||||||| |||||    
T  37787954 cataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaatttgat 37788015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 2468496 - 2468440
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaa 189  Q
    ||||||||||||||||| |||||| | |||| ||||||  |||||||||||| ||||    
T  2468496 tgtccataagctgttttgagcttacttccataaactcttcaggatagcttataaaaa 2468440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 11297167 - 11297227
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||||| |||||||||||||||||||||  ||||||  || || |||||| |||||||||    
T  11297167 tgtttgaaagagcttatggaaacaacttaagacatgtcaattagctattttcagcttattt 11297227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 18700475 - 18700427
Alignment:
Q  236 agagcttatggaaacaacttattacatgtttataaggtattttaagctt 284  Q
    |||||||||||||||||||||| |||||| |||||| | |||| |||||    
T  18700475 agagcttatggaaacaacttatgacatgtctataagttgttttcagctt 18700427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 28586777 - 28586829
Alignment:
Q  139 taagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||||||||||||||||||| | || | |||||||||||||||  ||||||||    
T  28586777 taagctgttttcagcttatttcgataagctctctaggatagctcgtcaaaaca 28586829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 29659403 - 29659351
Alignment:
Q  275 ttttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||| |||||||||| ||||||||||||  ||| ||||| |||||||||||||    
T  29659403 ttttcagcttatttatataaactctctaagataacttatgaaaacaacttata 29659351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 32194097 - 32194157
Alignment:
Q  275 ttttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||| |||||||||| |||| ||||| |  |||||||| ||||||| ||||||||||||||    
T  32194097 ttttcagcttatttatataagctctcaaagatagcttaaaaaaacatcttatagcttatat 32194157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 38047850 - 38047886
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgt 264  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  38047850 tgtttgggagagcttatggaaacaacttatgacatgt 38047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 327
Target Start/End: Original strand, 47427275 - 47427373
Alignment:
Q  229 gtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||||||||||||||||||||||||| |||| | |||||| ||||| ||||||||||   ||||||||| ||||||| |||| |||| | ||||||    
T  47427275 gtttgagagagcttatggaaacaacttatgacatctctataagctatttcaagcttatttttttaaactctcaagaatagtttatgaaaatagcttata 47427373  T

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Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 336
Target Start/End: Original strand, 46281111 - 46281219
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||| |||| ||| |||||||||||||  ||||| |||||  | |||| |||||||||| |||| | ||| ||||||||||||||||||| ||||||    
T  46281111 tgtttgaaagagtttacggaaacaacttatgccatgtctataaattgttttcagcttatttatataagccctccagaatagcttataaaaacagcttata 46281210  T
Q  328 gcttatatt 336  Q
    || ||||||    
T  46281211 gcctatatt 46281219  T

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Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 332
Target Start/End: Original strand, 33645937 - 33646035
Alignment:
Q  233 gagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagctta 332  Q
    ||||||||||||||||||||||||| |||||| |||||| | |||| || ||||||  |||| ||||| || ||||||||| ||||||  ||||||||||    
T  33645937 gagagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctccag-atagcttatgaaaacagtttatagctta 33646035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 339
Target Start/End: Original strand, 48157091 - 48157202
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||| |||||||||| ||||||||||||  |||||  ||||| | |||| |||||||||  ||||  ||||  ||||||||| | ||||||| |||||    
T  48157091 tgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaacaaattata 48157190  T
Q  328 gcttatattaaa 339  Q
    ||||||||||||    
T  48157191 gcttatattaaa 48157202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 36598325 - 36598387
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||| | |||| |||||||||    
T  36598325 attgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttattt 36598387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 24363606 - 24363665
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||||||||| ||||||||||||||| |||| | ||||| |||||||||||| |||||||    
T  24363606 tgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaa 24363665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 36538009 - 36537951
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagctt 284  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||| | |||| |||||    
T  36538009 attgtttgagagaacttatggaaacaacttatgacatgttcataagttgtttttagctt 36537951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 335
Target Start/End: Complemental strand, 39506010 - 39505948
Alignment:
Q  273 tattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||||| |||||||||  |||||||||| |||||||||||| |||||||||||  ||||||||    
T  39506010 tattttcagcttatttccataaactctccagaatagcttatgaaaacaacttaatgcttatat 39505948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 42656494 - 42656436
Alignment:
Q  21 acttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagc 79  Q
    |||| ||||||||||||| ||| |||||||||||||| |||||||||||  ||||||||    
T  42656494 actttattttatcttttgttatagaaatagcttatatataagtgcttattttgataagc 42656436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 12234870 - 12234950
Alignment:
Q  238 agcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaa 318  Q
    ||||||| |||||||||||| |||||| |||||| | |||| |||||||||  |||| |||||||| | |||| |||||||    
T  12234870 agcttatagaaacaacttatgacatgtctataagctgttttcagcttatttccataagctctctaggaaagctcataaaaa 12234950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 20553195 - 20553099
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagctt 331  Q
    ||||||||||||||||| ||||  ||||||| ||||| | |||| || ||||||  |||| ||| |||| ||| ||| | |||||||||||||||||    
T  20553195 gagagcttatggaaacagcttacgacatgttcataagttgttttcagattatttccataagctcactaggataacttgtgaaaacaacttatagctt 20553099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 38010813 - 38010706
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||||||   ||||| |||||||  || ||||||| ||||| | |||| |||||||||  ||||  ||||||| |||| |||| |||||| ||||||    
T  38010813 tgtttgagagtttttatgaaaacaacaaataacatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttata 38010714  T
Q  328 gcttatat 335  Q
    ||||||||    
T  38010713 gcttatat 38010706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 46082128 - 46082026
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagc--ttataaaaacaacttatagctta 332  Q
    ||||||||||| ||||||||||| |||||   ||||| | |||| |||||||||  |||| ||||| ||||||||   ||| ||||||||||||| ||||    
T  46082128 gagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataactta 46082029  T
Q  333 tat 335  Q
    |||    
T  46082028 tat 46082026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 3610723 - 3610817
Alignment:
Q  240 cttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    |||||||||||| || || ||||||  |||||   |||| |||||||||  |||| |||||||| |||| |||  ||||||||||||||||||||    
T  3610723 cttatggaaacagctaatgacatgtccataagcctttttcagcttatttctataagctctctaggatagtttacgaaaacaacttatagcttata 3610817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 327
Target Start/End: Complemental strand, 6601465 - 6601367
Alignment:
Q  229 gtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||| ||| |||||| |||||| |||| | ||||  ||||| |||| | |||||||||  |||| | ||| ||||||||||||||||||| ||||||    
T  6601465 gtttgaaagaacttatgaaaacaaattataaaatgtccataagctattctcagcttattttcataagcactccagaatagcttataaaaacagcttata 6601367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 20881723 - 20881809
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaataa 103  Q
    ||||||||| |||||||||||| ||| || |||||| |||  |||| |||||| ||||||||  |||| |||| ||||| |||||||    
T  20881723 tttaacttcgttttatcttttgctatagatatagctcatacataagagcttatcatgataagtgcttgtgctataaactacaaataa 20881809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 25422425 - 25422383
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataa 270  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||    
T  25422425 tgtttgggagagcttatggaaacaccttatgacatgtttataa 25422383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 33885546 - 33885592
Alignment:
Q  135 tccataagctgttttcagcttattaccatgaactctctaggatagct 181  Q
    ||||||||||||||| ||||||||  |||||||||| ||||||||||    
T  33885546 tccataagctgtttttagcttattttcatgaactctttaggatagct 33885592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 1710793 - 1710744
Alignment:
Q  135 tccataagctgttttcagcttattaccatgaactctctaggatagcttat 184  Q
    ||||||| |||||||||||||||| |||| | |||||||| |||||||||    
T  1710793 tccataaactgttttcagcttatttccataacctctctagaatagcttat 1710744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 2825235 - 2825308
Alignment:
Q  261 atgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    ||||| ||||| |||||| |||||||||  ||||  ||||||| ||||||| | |||||||||||||| |||||    
T  2825235 atgttcataagttattttcagcttatttccataagttctctaggatagcttgtgaaaacaacttatagtttata 2825308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 21248026 - 21247965
Alignment:
Q  227 ttgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    |||||| | |||| ||||||||| ||||||| ||||||| ||||| | ||||||||||||||    
T  21248026 ttgttttaaagagtttatggaaataacttatgacatgttcataagttgttttaagcttattt 21247965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 27496412 - 27496449
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactct 170  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  27496412 tgtccataagctgttttcagcttatttccataaactct 27496449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 27503070 - 27503107
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactct 170  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  27503070 tgtccataagctgttttcagcttatttccataaactct 27503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 28165188 - 28165079
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    ||||||| |||||||||||||| || |  || |||| ||||| | |||| | |||||||  |||| ||||| |  |||||||||||| |||  |||||||    
T  28165188 tttgagatagcttatggaaacagctcaagacctgttcataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagc 28165089  T
Q  330 ttatattaaa 339  Q
    ||||||||||    
T  28165088 ttatattaaa 28165079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 7453368 - 7453404
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgt 264  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  7453368 tgtttgagagagcatatggaaacatcttattacatgt 7453404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 9423578 - 9423662
Alignment:
Q  241 ttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    |||||||||||| |||| ||||||| ||||| | |||| |||||||||  | || ||||| || ||||||||| |||||| ||||    
T  9423578 ttatggaaacaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaacagctta 9423662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 12234894 - 12234942
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagct 181  Q
    |||| ||||||||||||||||||||| |||| | |||||||||| ||||    
T  12234894 tgtctataagctgttttcagcttatttccataagctctctaggaaagct 12234942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 25507377 - 25507341
Alignment:
Q  299 tctagaatagcttataaaaacaacttatagcttatat 335  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  25507377 tctagaataacttatgaaaacaacttatagcttatat 25507341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 28340878 - 28340922
Alignment:
Q  291 ataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||| |||||||| ||||||||| |||||| ||||||||||||||    
T  28340878 ataagctctctaggatagcttatgaaaacagcttatagcttatat 28340922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 30134150 - 30134106
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataa 270  Q
    ||||||||||| |||||||||||||| ||||| |||||| |||||    
T  30134150 attgtttgagaaagcttatggaaacagcttatgacatgtctataa 30134106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 39506014 - 39505962
Alignment:
Q  140 aagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    ||||| ||||||||||||| |||| ||||||| || ||||||||| |||||||    
T  39506014 aagctattttcagcttatttccataaactctccagaatagcttatgaaaacaa 39505962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 39551515 - 39551579
Alignment:
Q  224 aaattgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||||| ||| |||| ||||||||||||||||| ||||||  ||||||| || | |||||||||    
T  39551515 aaattgtctgaaagaggttatggaaacaacttatgacatgtccataaggtgttgtcagcttattt 39551579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 334
Target Start/End: Original strand, 46104536 - 46104644
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    |||||||| || || ||||| |||||||| || ||||||  ||||  | |||  |||||||||  |||| ||||  || ||||||||| |||||||||||    
T  46104536 attgtttgggaaagattatgaaaacaactcatgacatgtcaataaaatgtttccagcttattttcataagctcttcagcatagcttatgaaaacaactta 46104635  T
Q  326 tagcttata 334  Q
    |||||||||    
T  46104636 tagcttata 46104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 47527945 - 47527985
Alignment:
Q  139 taagctgttttcagcttattaccatgaactctctaggatag 179  Q
    |||||||||||||||||||| ||||||| |||||| |||||    
T  47527945 taagctgttttcagcttattcccatgaaatctctatgatag 47527985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 6509274 - 6509381
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||||||||||||| |||||| ||||| |||||  |||||  |||||| | |||||||  |||| ||||| || ||||||||| |||||| ||||||    
T  6509274 tgtttgagagagcttatagaaacagcttatgacatgcctataaactattttcaccttatttcaataagctctccaggatagcttatgaaaacagcttata 6509373  T
Q  328 gcttatat 335  Q
    ||||||||    
T  6509374 gcttatat 6509381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 11415255 - 11415146
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    ||||||| |||||| ||||||||||| ||||| ||||||  ||||| |||| | |||||||||  | ||||||||||| ||||||||| |||||| | ||    
T  11415255 attgttttagagagtttatggaaacagcttataacatgtccataagctattctcagcttattttcacaaactctctaggatagcttatgaaaacagcgta 11415156  T
Q  326 tagcttatat 335  Q
    || |||||||    
T  11415155 taacttatat 11415146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 30277253 - 30277308
Alignment:
Q  136 ccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||    
T  30277253 ccataagttgttttcagcttatttccataaactctctaggatagcttatgaaaaca 30277308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 26473730 - 26473820
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    ||||||||||| ||||| ||||| |||||| |||||| || ||| | |||||||  |||| |||||||| ||||||||| |||||||||||    
T  26473730 gagagcttatgaaaacagcttatgacatgtctataagctagttttaacttattttcataagctctctaggatagcttatgaaaacaactta 26473820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 11188171 - 11188216
Alignment:
Q  144 tgttttcagcttattaccatgaactctctaggatagcttatcaaaa 189  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||    
T  11188171 tgttttcagtttattaccataaactctctaggatagcttatcaaaa 11188216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 5069796 - 5069736
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||  ||||| |||||||||    
T  5069796 tgtttgagagagcttatggaaacatcttataacatgttcataagtcattttcagcttattt 5069736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 8062396 - 8062336
Alignment:
Q  131 cgtgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||||||||||| ||||||||||||||| |||| | ||||||| |||||||||| ||||||    
T  8062396 cgtgtccataagatgttttcagcttatttccataatctctctaagatagcttatgaaaaca 8062336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 8060768 - 8060669
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||||||||||||||| |||||| ||||   | ||| ||||| |||||| |||||||||  |||| |||||||| || |||||| |||||| ||||||    
T  8060768 tgtttgagagagcttatgaaaacaaattatggaaagttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaacagcttata 8060669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 334
Target Start/End: Original strand, 30600320 - 30600426
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||||||||||||||||||||||| || ||||||| || || | |||| || || ||| |  ||  |||||| |||||| ||| |||||||||||||    
T  30600320 tgtttgagagagcttatggaaacaactcatgacatgttcatgagttgtttttagtttcttttggcaagttctctataatagcatatgaaaacaacttata 30600419  T
Q  328 gcttata 334  Q
     ||||||    
T  30600420 acttata 30600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 30987962 - 30988012
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtatttt 278  Q
    |||||||||||||||||||||||||||||| ||||||  ||||| ||||||    
T  30987962 tgtttgagagagcttatggaaacaacttatgacatgtccataagctatttt 30988012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 31705146 - 31705092
Alignment:
Q  137 cataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||||||||||||||||||||| |||| ||||||| |||| ||||||| ||||||    
T  31705146 cataagctgttttcagcttatttccataaactctcaaggacagcttatgaaaaca 31705092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 2458575 - 2458632
Alignment:
Q  137 cataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaaat 194  Q
    |||||||||||||||| ||||| |||| | ||||||||||||||||||  ||||||||    
T  2458575 cataagctgttttcagtttatttccataagctctctaggatagcttatgtaaacaaat 2458632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 44865589 - 44865642
Alignment:
Q  282 cttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||||||  ||||||||||||| ||||||||||||| || ||||||||||||||    
T  44865589 cttatttccataaactctctagtatagcttataaaaccagcttatagcttatat 44865642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 14949931 - 14949875
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaa 189  Q
    |||||||||||||||||||||||||| | || | |||| ||||||||||||| ||||    
T  14949931 tgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaaa 14949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 318
Target Start/End: Complemental strand, 26479882 - 26479794
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaa 318  Q
    |||| |||||||||||||||||||||||  ||||| |||||| | |||| ||| |||||  |||| ||||| ||||||| |||| ||||    
T  26479882 tttgcgagagcttatggaaacaacttatgtcatgtctataagtttttttcagcgtatttccataagctctccagaataggttatgaaaa 26479794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 325
Target Start/End: Complemental strand, 27646002 - 27645906
Alignment:
Q  229 gtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    ||||||||||||||||| | ||||||||| |||| | |||||| |||||| | |||||||  |||| |||||||| ||| || || |||| ||||||    
T  27646002 gtttgagagagcttatgcatacaacttatgacatatctataagctattttcaacttatttctataagctctctagtatatctaatgaaaataactta 27645906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 334
Target Start/End: Original strand, 28769312 - 28769416
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    ||||||||||||| || ||| | | ||| | ||||  ||||| | |||| |||||||||  |||||||||| | |||||||||| |||||| ||||||||    
T  28769312 tttgagagagcttgtgtaaatagcatatgatatgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagc 28769411  T
Q  330 ttata 334  Q
    |||||    
T  28769412 ttata 28769416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 10079049 - 10079140
Alignment:
Q  236 agagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||| ||||||||||||||| |||| ||  ||||| | |||||||||| |||  ||||||| || ||||||||| || |||||| ||||||    
T  10079049 agagcctatggaaacaacttaatacacgtccataagttgttttaagcttctttccataaactttccagaatagctcatgaaaacagcttata 10079140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 327
Target Start/End: Original strand, 11569428 - 11569527
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||| |||||||||||||||||| ||||| ||||||  ||||| | |||| |||||||||  | || ||||| |  ||||||||| |||||| ||||||    
T  11569428 tgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 30191112 - 30191219
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||| ||||||||||||||||||||||| ||||||| | ||  | |||| |||||||||  ||||||  |  || ||||||||| |||| | ||||||    
T  30191112 tgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagcttatcaaaatagcttata 30191211  T
Q  328 gcttatat 335  Q
    | ||||||    
T  30191212 gattatat 30191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 30389198 - 30389091
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||||||||| |||| ||| | || || ||||||| ||||| | |||| |||||||||  ||||  ||||||| | ||||||| |||||| | ||||    
T  30389198 tgtttgagagagcatatgaaaatagctaatgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtata 30389099  T
Q  328 gcttatat 335  Q
    ||||||||    
T  30389098 gcttatat 30389091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 331
Target Start/End: Original strand, 39551180 - 39551283
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||| ||||  ||||||||||||||||| ||||||  | ||| | |||| | |||||||  |||| ||||| || | ||||||| |||||||||||||    
T  39551180 tgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaacaacttata 39551279  T
Q  328 gctt 331  Q
    ||||    
T  39551280 gctt 39551283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 8536039 - 8536105
Alignment:
Q  254 ttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaaca 320  Q
    |||| |||||||| |||| |||||||||||||| |  ||||||||||||  ||||||||| ||||||    
T  8536039 ttatgacatgtttctaagctattttaagcttatctccataaactctctatgatagcttatgaaaaca 8536105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 11415219 - 11415161
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||||||||||| || ||||||||||  ||  |||||||||||||||||||| ||||||    
T  11415219 tgtccataagctattctcagcttattttcacaaactctctaggatagcttatgaaaaca 11415161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 20672811 - 20672757
Alignment:
Q  137 cataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    ||||||||||||||||||||||  ||| | ||||| |||||||||||| ||||||    
T  20672811 cataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 24258157 - 24258083
Alignment:
Q  236 agagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagct 310  Q
    ||||||| || |||||| |||| ||||||  ||| | ||||||||||||||||| ||||||||| ||| ||||||    
T  24258157 agagcttgtgaaaacaatttatgacatgtacataggttattttaagcttatttacataaactctttaggatagct 24258083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 26215479 - 26215417
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagc 79  Q
    |||||||| ||||||||||||| ||| |||||||||||||  |||| |||||| || ||||||    
T  26215479 tttaactttattttatcttttgttatagaaatagcttatacataagcgcttatcattataagc 26215417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 28769344 - 28769402
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||||||||| ||||||||||||||| |||| ||||||| |  ||||||||| ||||||    
T  28769344 tgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaaca 28769402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 333
Target Start/End: Complemental strand, 29973117 - 29973075
Alignment:
Q  291 ataaactctctagaatagcttataaaaacaacttatagcttat 333  Q
    |||||||||| || ||||||||| |||||||||||||||||||    
T  29973117 ataaactctcaaggatagcttatgaaaacaacttatagcttat 29973075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 256
Target Start/End: Complemental strand, 29973253 - 29973223
Alignment:
Q  226 attgtttgagagagcttatggaaacaactta 256  Q
    |||||||||||||||||||||||||||||||    
T  29973253 attgtttgagagagcttatggaaacaactta 29973223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 334
Target Start/End: Complemental strand, 31862591 - 31862486
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||||||||| ||| |||| |||||||| || | |  ||||| | |||| |||||||||  |||| |||||||| ||| ||||| |||||| ||||||    
T  31862591 tgtttgagagag-ttacggaagcaacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttata 31862493  T
Q  328 gcttata 334  Q
    |||||||    
T  31862492 gcttata 31862486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 31862554 - 31862500
Alignment:
Q  137 cataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    ||||||||||||||||||||||  ||| | |||||||||||| ||||| ||||||    
T  31862554 cataagctgttttcagcttattttcataagctctctaggataacttatgaaaaca 31862500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 332
Target Start/End: Complemental strand, 34770925 - 34770887
Alignment:
Q  294 aactctctagaatagcttataaaaacaacttatagctta 332  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  34770925 aactctctaggatagcttatgaaaacaacttatagctta 34770887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 40071848 - 40071806
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataa 270  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||    
T  40071848 tgtttgggagagcttatggaaacaacttatgacatgttcataa 40071806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 11183638 - 11183537
Alignment:
Q  234 agagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttat 333  Q
    |||||||||||  ||||||||||| | |||| |||||| | |||| |||||||||  |||| ||||| ||  |||||| | |||||| ||||||||| ||    
T  11183638 agagagcttataaaaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttatagctaat 11183539  T
Q  334 at 335  Q
    ||    
T  11183538 at 11183537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 29973156 - 29973087
Alignment:
Q  124 cttacgtcgtgtccataagctg-ttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||||| | |||||| |||||| ||||||| ||||| |||| ||||||| |||||||||||| |||||||    
T  29973156 cttacgacatgtccaaaagctggttttcagtttatttccataaactctcaaggatagcttatgaaaacaa 29973087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 8062584 - 8062516
Alignment:
Q  267 ataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    ||||| |||||  |||||||||  ||||||||||||  ||||||||| | |||| ||||||||||||||    
T  8062584 ataagctatttccagcttattttcataaactctctaagatagcttatgagaacatcttatagcttatat 8062516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 25869271 - 25869327
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaa 189  Q
    |||||||||| ||||||||||||||| |||| ||||||| | |||||| ||| ||||    
T  25869271 tgtccataagttgttttcagcttatttccataaactctccatgatagcctatgaaaa 25869327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 30277263 - 30277315
Alignment:
Q  275 ttttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||| |||||||||  ||||||||||||| ||||||||| |||||| ||||||    
T  30277263 ttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 31705137 - 31705077
Alignment:
Q  275 ttttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||| |||||||||  |||||||||| || | ||||||| |||||| ||||||||||||||    
T  31705137 ttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagcttatat 31705077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 31875566 - 31875602
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgt 264  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  31875566 tgtttgagaaagcttatggaaacaacttatgacatgt 31875602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 335
Target Start/End: Complemental strand, 31884688 - 31884586
Alignment:
Q  231 ttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagct 330  Q
    |||||| | ||||| |||||||||||| ||||| | ||||  | |||| ||||||||||  ||||||||| |  ||||||||| ||||||| ||||||||    
T  31884688 ttgagatatcttatcgaaacaacttataacatgatcataac-tgttttcagcttatttat-taaactctccatgatagcttatgaaaacaatttatagct 31884591  T
Q  331 tatat 335  Q
    |||||    
T  31884590 tatat 31884586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 34290961 - 34290869
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||| ||||||| ||| ||||||||||||  |||||   |||| |||||||||  || ||||||| || |||| ||| ||||||||||||||    
T  34290961 gagagtttatggagacagcttattacatgtccataagcctttttcagcttattttcattaactctccaggatagattagaaaaacaacttata 34290869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 34770930 - 34770898
Alignment:
Q  160 ccatgaactctctaggatagcttatcaaaacaa 192  Q
    ||||||||||||||||||||||||| |||||||    
T  34770930 ccatgaactctctaggatagcttatgaaaacaa 34770898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 43504831 - 43504747
Alignment:
Q  247 aaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagctt 331  Q
    ||||||||||  || |||||||||| | |||| |||||||||  ||||  |||| |  |||||||||||||||| ||||||||||    
T  43504831 aaacaacttacgacttgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttatagctt 43504747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 281819 - 281926
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||| ||||||| |||||| |||||||| |||||| |||||| | |||| |||||||||  || | |||||||| ||||||||| || ||| ||||||    
T  281819 tgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaacacagcttata 281918  T
Q  328 gcttatat 335  Q
    ||||||||    
T  281919 gcttatat 281926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 264354 - 264270
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaat 101  Q
    |||||||| ||||||||||||| | | |||||||||||||| ||||  ||||| |||||||||||||| |||| || ||||||||    
T  264354 tttaactttattttatcttttgctttagaaatagcttatatataagcacttatcatgataagcacttgtgctataagctgcaaat 264270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 335
Target Start/End: Complemental strand, 2117493 - 2117395
Alignment:
Q  237 gagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||||||| ||||||| ||||  ||||| |||||| | |||| |||||||||  |||| |||||||| ||| ||||| |||||||||||||| ||||||    
T  2117493 gagcttatagaaacaatttatggcatgtctataagctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatat 2117395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 2460122 - 2460211
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaa 317  Q
    |||||||||||||||||||||||||||||| |||||| | |||| | |||| | |||||||  |||| ||||| | ||||||||| ||||    
T  2460122 tgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctccataatagcttacaaaa 2460211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 281853 - 281904
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttat 184  Q
    |||| ||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  281853 tgtctataagttgttttcagcttatttccatgagctctctaggatagcttat 281904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 335
Target Start/End: Complemental strand, 4006805 - 4006706
Alignment:
Q  236 agagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    ||||||| || ||||||||||  | ||||  ||||| |||||| |||||||||  |||| |||||  | ||||||||| |||||||||||||||||||||    
T  4006805 agagcttgtgaaaacaacttacgatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagcttatat 4006706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 29957893 - 29957979
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttata 314  Q
    ||||||||||||||||||| ||  ||| || ||||||| || |  |||||| |||||||||  |||| |||||||||||||||||||    
T  29957893 tgtttgagagagcttatgggaaatactcatgacatgttcatgatctattttcagcttatttccataagctctctagaatagcttata 29957979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 9093643 - 9093704
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataag 78  Q
    |||||||| ||||||||||||||||| ||||||||||||   |||| |||||| ||||||||    
T  9093643 tttaactttattttatcttttgatatagaaatagcttatccataagcgcttatcatgataag 9093704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 34939616 - 34939583
Alignment:
Q  224 aaattgtttgagagagcttatggaaacaacttat 257  Q
    ||||||||||||||||||||||||||||||||||    
T  34939616 aaattgtttgagagagcttatggaaacaacttat 34939583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 2727894 - 2727934
Alignment:
Q  295 actctctagaatagcttataaaaacaacttatagcttatat 335  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  2727894 actctctaggatagcttatgaaaacaacttatagcttatat 2727934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 30523751 - 30523652
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    |||| ||||||||||||||||||  |||||| ||||| | |||| | || ||||  |||| ||||| || ||||||||| |||| |||||||||||||||    
T  30523751 gagatcttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaa-aacttatagcttata 30523653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 33832244 - 33832304
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||| ||||| |||||| ||||||||||| ||||||||||||| | |||| |||||||||    
T  33832244 tgtttaagagaacttatgaaaacaacttatgacatgtttataagttgtttttagcttattt 33832304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 103435 - 103384
Alignment:
Q  18 ttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttat 69  Q
    |||||||||| |||||||||| ||| ||||||||||||| ||||||| ||||    
T  103435 ttaacttcatattatcttttgctatagaaatagcttatacgtaagtgtttat 103384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 321
Target Start/End: Original strand, 2205560 - 2205654
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaa 321  Q
    ||||||| ||||||||||||||||||| |||  ||||||||||||  ||| || |||||||||  |||| ||||| |  ||||||||| |||||||    
T  2205560 attgttttagagagcttatggaaacaa-ttaggacatgtttataaactatattcagcttatttccataagctctccaagatagcttatgaaaacaa 2205654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 2455357 - 2455298
Alignment:
Q  230 tttgagagagcttatggaaacaacttattaca-tgtttataaggtattttaagcttattt 288  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| | |||| |||||||||    
T  2455357 tttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagcttattt 2455298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 335
Target Start/End: Complemental strand, 7148757 - 7148658
Alignment:
Q  236 agagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||||||| ||||||||||||| || |||  ||||| |||||| | |||||||  |||| ||||| ||  |||||||| |||| | ||||||||||||||    
T  7148757 agagcttacggaaacaacttatgacttgtccataagctattttcaacttattttcataagctctccagggtagcttattaaaataccttatagcttatat 7148658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 317
Target Start/End: Original strand, 34538191 - 34538278
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaa 317  Q
    ||||||||| |||||  ||||| ||||  ||||||  ||||  |||||| |||||||||| | ||||||||||| |||||||||||||    
T  34538191 tttgagagatcttataaaaacagcttacgacatgtccataaactattttcagcttatttatacaaactctctaggatagcttataaaa 34538278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 34939809 - 34939758
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttat 184  Q
    |||||||||  ||||||||||||||| |||| ||||||| ||||||||||||    
T  34939809 tgtccataaattgttttcagcttatttccataaactctccaggatagcttat 34939758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 740861 - 740907
Alignment:
Q  232 tgagagagcttatggaaacaacttattacatgtttataaggtatttt 278  Q
    ||||||||||| |||||||||||||| ||||||| ||||| ||||||    
T  740861 tgagagagcttgtggaaacaacttatgacatgttcataagttatttt 740907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 32577955 - 32577993
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgt 264  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  32577955 attgtttgagagagcttatgaaaacaacttatgacatgt 32577993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 334
Target Start/End: Complemental strand, 415326 - 415297
Alignment:
Q  305 atagcttataaaaacaacttatagcttata 334  Q
    ||||||||||||||||||||||||||||||    
T  415326 atagcttataaaaacaacttatagcttata 415297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 2460930 - 2460999
Alignment:
Q  244 tggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttat 313  Q
    ||||||||||||||||||||| |||||| |||||| |  ||||||  | ||||||||||| || ||||||    
T  2460930 tggaaacaacttattacatgtctataagctattttcaatttattttcacaaactctctagcatggcttat 2460999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 335
Target Start/End: Complemental strand, 4246507 - 4246402
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    |||||| |||||| ||||||||||| || ||||||  ||||| | |||| | |||||||  |||  ||||| | |||||||||| |||||| |||||||     
T  4246507 tttgagtgagcttttggaaacaactcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttataga 4246408  T
Q  330 ttatat 335  Q
    ||||||    
T  4246407 ttatat 4246402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 9559628 - 9559713
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaata 102  Q
    ||||| || ||||||||||||| ||| |||||| ||||||  |||| ||||||  |||||| | |||| |||| ||||||||||||    
T  9559628 tttaaatttattttatcttttgctatagaaataacttatacataagcgcttatcttgataaactcttgagctataaactgcaaata 9559713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 319
Target Start/End: Original strand, 10616514 - 10616603
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaac 319  Q
    |||| ||||||||||||||||||||||| ||||||   |||| | | || |||||||||  |||| ||||| | |||||||||| |||||    
T  10616514 tttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagcttattaaaac 10616603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 22743573 - 22743520
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||||| ||| ||||||||||||||||||| ||||| | |||| |||||||||    
T  22743573 gagagctcatgaaaacaacttattacatgttcataagctgttttcagcttattt 22743520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 24782294 - 24782261
Alignment:
Q  224 aaattgtttgagagagcttatggaaacaacttat 257  Q
    ||||||||||||||||||||| ||||||||||||    
T  24782294 aaattgtttgagagagcttatagaaacaacttat 24782261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 8183237 - 8183137
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    ||||||||||| ||||| ||||  | ||||| ||||| | |||| ||| | |||  |||| || ||||||||||||| | ||||||||||||| ||||||    
T  8183237 gagagcttatgaaaacagcttacgaaatgttcataagctgtttttagcctgttttcataagctttctagaatagcttgtgaaaacaacttataccttata 8183138  T
Q  335 t 335  Q
    |    
T  8183137 t 8183137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 9027677 - 9027617
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||||| |||||||||||||| ||||||| ||||||  ||||| | |||| |||||||||    
T  9027677 tgtttgaaagagcttatggaaataacttatgacatgtccataagttgttttcagcttattt 9027617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 24476585 - 24476533
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttat 69  Q
    ||||||| |||||||||||||| ||| |||||||||||||  |||||| ||||    
T  24476585 tttaactacattttatcttttgctatagaaatagcttatacataagtgtttat 24476533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 27693412 - 27693460
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtatttt 278  Q
    |||||||||  ||||||||||||||||| ||||||| ||||| ||||||    
T  27693412 tttgagagaatttatggaaacaacttatgacatgttcataagctatttt 27693460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 28088205 - 28088300
Alignment:
Q  239 gcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||||||||||||||||| ||||||| |||| | | |||| |||||||||  || | ||||| |  ||||||||| ||||||  |||||||||||||    
T  28088205 gcttatggaaacaactta-tacatgtctataggttgttttgagcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatat 28088300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 32917296 - 32917260
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgt 264  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  32917296 tgtttgggagagcttatggaaacaacttatgacatgt 32917260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 33498710 - 33498658
Alignment:
Q  236 agagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    |||||||||| ||||||||||| |||||| |||| | |||||| |||||||||    
T  33498710 agagcttatgaaaacaacttatgacatgtctataggttattttcagcttattt 33498658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 6978945 - 6979039
Alignment:
Q  240 cttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    ||||| |||| ||||||| |||||| |||||| | |||| |||||||||  ||||||||| ||| || |||||||||||||||||||||| ||||    
T  6978945 cttattgaaataacttatgacatgtctataagctgttttcagcttattttcataaactctttaggatggcttataaaaacaacttatagcatata 6979039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 2996672 - 2996565
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||||||||||||||| ||||||||||| ||||||  ||||| | |||| | |||||||  |||  ||||| |  ||||||||| |||||||||||||    
T  2996672 tgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttata 2996573  T
Q  328 gcttatat 335  Q
     |||||||    
T  2996572 acttatat 2996565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 6466036 - 6466123
Alignment:
Q  247 aaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    ||||||||||| | ||||| ||||| |||||| | |||||||  |||| ||||||||||||||||||  ||||||||||||| |||||    
T  6466036 aaacaacttatgagatgttcataagctattttcaacttatttccataatctctctagaatagcttatggaaacaacttatagattata 6466123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 29467629 - 29467675
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatag 179  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||    
T  29467629 tgtccataagctgttttcagcttatttccataaactctctaggatag 29467675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 27123323 - 27123412
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaa 317  Q
    |||||||||||||||||||||||||||||| |||||| | |||| | |||| | |||||||  |||| ||||| | ||||||||| ||||    
T  27123323 tgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctccataatagcttacaaaa 27123412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 32799723 - 32799794
Alignment:
Q  111 ctgtttgagagagcttacgtcgtgtccataagctgttttcagcttattaccatgaactctctaggatagctt 182  Q
    ||||||||||||||||| | |   |||||||||||||||||||||||| | || ||||||||| ||||||||    
T  32799723 ctgtttgagagagcttatgacacatccataagctgttttcagcttatttcgataaactctctatgatagctt 32799794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 6364128 - 6364066
Alignment:
Q  21 acttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcactt 83  Q
    |||| ||||||||||||| ||| |||||||||||||  |||||||||||  ||||||||||||    
T  6364128 actttattttatcttttgttatagaaatagcttatacataagtgcttatcttgataagcactt 6364066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 24370934 - 24371027
Alignment:
Q  240 cttatggaaacaacttattacatgttta--taaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagctt 331  Q
    |||||||||||||||||| |||||| ||  ||||   |||| |||||||||  ||||||| | ||| ||||||||| |||||||||||||||||    
T  24370934 cttatggaaacaacttatgacatgtatacataagccgttttcagcttatttctataaactatttaggatagcttatgaaaacaacttatagctt 24371027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 18020035 - 18019978
Alignment:
Q  135 tccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||| ||||||||||||| ||||| |||| |||||||||| ||||||||| |||||||    
T  18020035 tccacaagctgttttcagtttatttccataaactctctagcatagcttatgaaaacaa 18019978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 45128279 - 45128388
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    ||||||||||||||||||||||||||||| ||  |||||  || || | |||| |||||||||  |||| || | ||| | || |||| ||||||| |||    
T  45128279 attgtttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataagctttataggacagtttatgaaaacaattta 45128378  T
Q  326 tagcttatat 335  Q
    ||||||||||    
T  45128379 tagcttatat 45128388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 19429771 - 19429723
Alignment:
Q  136 ccataagctgttttcagcttattaccatgaactctctaggatagcttat 184  Q
    ||||||||||||||||||||||| |||| | ||||| ||||||||||||    
T  19429771 ccataagctgttttcagcttatttccataagctctccaggatagcttat 19429723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 23676797 - 23676706
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaa 318  Q
    ||||||||||| ||||||||||||||||||||  ||| | |||||  | ||||||||||||||  |||| || || || ||||||||||||||    
T  23676797 attgtttgagatagcttatggaaacaacttatggcatatctataa-ctgttttaagcttatttccataagctttcaagtatagcttataaaaa 23676706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 3155586 - 3155519
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttg 84  Q
    |||||||| ||||||||||||| ||| |||||||||||||  ||  ||||||| ||||||||| ||||    
T  3155586 tttaactttattttatcttttgctatagaaatagcttatacatacatgcttatcatgataagcgcttg 3155519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 6978967 - 6979026
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||| |||||||||||||||||||||  ||| |||||| |||||| |||||| |||||||    
T  6978967 tgtctataagctgttttcagcttattttcataaactctttaggatggcttataaaaacaa 6979026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 334
Target Start/End: Original strand, 7694012 - 7694087
Alignment:
Q  259 acatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    ||||||| ||||| | |||| |||||||||  |||||||||| || ||| ||||| |||||| |||||||||||||    
T  7694012 acatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttata 7694087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 11264366 - 11264307
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    ||||||||| ||||||||| |||||| |||| | ||||||||||| |||||| |||||||    
T  11264366 tgtccataaactgttttcaacttatttccataagctctctaggatggcttatgaaaacaa 11264307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 56480331 - 56480284
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtg 64  Q
    |||||||| ||||| ||||||| ||||||||||||||||| |||||||    
T  56480331 tttaactttattttgtcttttgttatggaaatagcttatacgtaagtg 56480284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 327
Target Start/End: Complemental strand, 1966031 - 1965941
Alignment:
Q  237 gagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||||| ||||||||||| ||||||| ||||| | |||| | |||||||  | ||  | ||||| |||||||||||||| ||||||||    
T  1966031 gagcttatgaaaacaacttatgacatgttcataagctgtttttaacttatttccagaagatttctaggatagcttataaaaataacttata 1965941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 7694019 - 7694073
Alignment:
Q  137 cataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||||| ||||||||||||||| |||| ||||||| |||||| ||||| ||||||    
T  7694019 cataagttgttttcagcttatttccataaactctccaggataacttatgaaaaca 7694073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 19395044 - 19395102
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||||||| |||||  ||||||||||  ||||||||||||| |||||| |||||||||    
T  19395044 tttgagagaacttataaaaacaacttacgacatgtttataagctattttcagcttattt 19395102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 24929579 - 24929489
Alignment:
Q  241 ttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagctt 331  Q
    ||||||||||| |||||  |||||| ||||  | |||| |||||||||  |||| |||||||| | || |||| |||||||||||||||||    
T  24929579 ttatggaaacagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagctt 24929489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 335
Target Start/End: Original strand, 30207547 - 30207649
Alignment:
Q  233 gagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagctta 332  Q
    ||||||||||||   |||| | ||| |||||| | |||| | |||| |||||||||  |||| |||||||   |||||||| ||||||||||||||||||    
T  30207547 gagagagcttataagaacagcatatgacatgtctgtaagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagctta 30207646  T
Q  333 tat 335  Q
    |||    
T  30207647 tat 30207649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 52419589 - 52419631
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataa 270  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||    
T  52419589 tgtttgagagaccttatgaaaacaacttattacatgttcataa 52419631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 2987171 - 2987106
Alignment:
Q  18 ttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcactt 83  Q
    ||||||| ||||||| ||||| | | |||||||||||||  ||||||||||| ||||||| |||||    
T  2987171 ttaactttattttattttttgttgtagaaatagcttataaataagtgcttatcatgataaacactt 2987106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 5131255 - 5131304
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagctt 182  Q
    |||||||||| ||||||||||||||| |||| | ||||| ||||||||||    
T  5131255 tgtccataagttgttttcagcttatttccataagctctccaggatagctt 5131304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 27124131 - 27124200
Alignment:
Q  244 tggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttat 313  Q
    ||||||||||||||||||||| |||||| |||||| |  ||||||  | ||||||||||| || ||||||    
T  27124131 tggaaacaacttattacatgtctataagctattttcaatttattttcacaaactctctagcatggcttat 27124200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 30207582 - 30207635
Alignment:
Q  139 taagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||||||||||||||||||| |||| | ||||||| | |||||||| |||||||    
T  30207582 taagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaa 30207635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 50471223 - 50471276
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||||||||| ||||||||||| ||||  ||||||| |||||| |||||||||    
T  50471223 gagagcttatgtaaacaacttatgacatagttataagctatttttagcttattt 50471276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 328
Target Start/End: Original strand, 6987712 - 6987812
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||| ||||||||||||| ||||||||| ||||||  ||||  |||||| | |||||||  |||| ||||| || ||||| || ||||| |||| |||    
T  6987712 tgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctctccaggatagcgtaaaaaaataactaata 6987811  T
Q  328 g 328  Q
    |    
T  6987812 g 6987812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 8468984 - 8468940
Alignment:
Q  291 ataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||| |||||||||||| ||||| ||||||||| |||||||||||    
T  8468984 ataagctctctagaataacttatgaaaacaactaatagcttatat 8468940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 11158365 - 11158421
Alignment:
Q  136 ccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||||| |||||||||||||||| |||  | ||||||| |||||||||| |||||||    
T  11158365 ccataaactgttttcagcttatttccacaagctctctaagatagcttatgaaaacaa 11158421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 26520316 - 26520400
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaat 101  Q
    |||||||| |||| |||||||| ||| |||| || |||||  ||||||||||| ||||||| |||||  ||||||| | ||||||    
T  26520316 tttaactttatttcatcttttgttatagaaacagtttatacataagtgcttatcatgataaacacttatgctagaagcagcaaat 26520400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 27725313 - 27725277
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgt 264  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  27725313 tgtttgagagagcttatggaaataacttatgacatgt 27725277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 42866104 - 42866060
Alignment:
Q  291 ataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||| ||||| || ||||||||| |||||||||||||||||||||    
T  42866104 ataagctctcaaggatagcttatgaaaacaacttatagcttatat 42866060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 40158805 - 40158711
Alignment:
Q  240 cttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    |||||| ||||| ||||| ||||||||||||| | |||| |||||| ||| |||| ||||| |||||| ||||| |||||||||||| |||||||    
T  40158805 cttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaacaacttattgcttata 40158711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 15120282 - 15120189
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaa 321  Q
    |||||| ||||||||||||||||||||||| ||||||| || || | |||||||||||||| ||||| ||||| |  ||||||||  |||||||    
T  15120282 tgtttgggagagcttatggaaacaacttatgacatgttcattagctgttttaagcttattttgataagctctccatgatagcttacgaaaacaa 15120189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 3973602 - 3973549
Alignment:
Q  131 cgtgtccataagctgttttcagcttattaccatgaactctctaggatagcttat 184  Q
    ||||||||||| |||||||||||||||| |||| ||||| ||||||||||||||    
T  3973602 cgtgtccataacctgttttcagcttatttccataaactccctaggatagcttat 3973549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 332
Target Start/End: Complemental strand, 33942251 - 33942145
Alignment:
Q  228 tgtttgagagagcttatggaaa--caacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    |||||||||||||||||||| |  |||||||| ||||||| ||||| | |||| |||| ||||  || | |||||||  || |||||| |||||||||||    
T  33942251 tgtttgagagagcttatggagagacaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaactta 33942152  T
Q  326 tagctta 332  Q
    |||||||    
T  33942151 tagctta 33942145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 4550846 - 4550796
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtatttt 278  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||| ||||||    
T  4550846 tgtttgggagagcttatggaaacaacttatgacatgttcataagctatttt 4550796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 230 - 335
Target Start/End: Original strand, 1742005 - 1742110
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    |||| ||||||||||||||||||||||| ||||||  ||||| ||| || | |||||||  |||||||||  |  |||| |||| |||||| |||||| |    
T  1742005 tttgggagagcttatggaaacaacttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattatgaaaacagcttatatc 1742104  T
Q  330 ttatat 335  Q
    ||||||    
T  1742105 ttatat 1742110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 3059281 - 3059338
Alignment:
Q  135 tccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||| ||||||||||||| ||||| |||| |||||||||| ||||||||| |||||||    
T  3059281 tccacaagctgttttcagtttatttccataaactctctagcatagcttatgaaaacaa 3059338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 335
Target Start/End: Complemental strand, 39983410 - 39983334
Alignment:
Q  259 acatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||||| |||||| |||||| || ||||||  || | ||||| || ||||||||| |||||||||||||||||||||    
T  39983410 acatgtctataagctattttcagtttattttcattagctctccaggatagcttatgaaaacaacttatagcttatat 39983334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 42907342 - 42907290
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttat 69  Q
    |||||||| ||||| |||| || ||| ||||||||||||||||||||||||||    
T  42907342 tttaactttattttttcttctgttatagaaatagcttatatgtaagtgcttat 42907290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 5781756 - 5781685
Alignment:
Q  111 ctgtttgagagagcttacgtcgtgtccataagctgttttcagcttattaccatgaactctctaggatagctt 182  Q
    ||||||| ||||||||| | | ||| ||||| |||||||||||||||| |||| | ||||||| ||||||||    
T  5781756 ctgtttgcgagagcttatgacatgtgcataaactgttttcagcttatttccataagctctctatgatagctt 5781685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 6547989 - 6547942
Alignment:
Q  111 ctgtttgagagagcttacgtcgtgtccataagctgttttcagcttatt 158  Q
    ||||||||| ||||||| | | ||||||||||||||||||||||||||    
T  6547989 ctgtttgagggagcttatgccatgtccataagctgttttcagcttatt 6547942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 6993695 - 6993802
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||| ||| |||||| ||| | |||||  |||||  |||||  ||||| |||||||||  |||| ||||| || ||||||||| |||||||| ||||    
T  6993695 tgtttgatagaacttatgtaaatagcttatggcatgtccataagtcatttttagcttattttcataagctctcaagcatagcttatgaaaacaacctata 6993794  T
Q  328 gcttatat 335  Q
    ||||||||    
T  6993795 gcttatat 6993802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 22681156 - 22681263
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||||||   ||||| |||||||  || ||||||| ||||| | |||| |||||||||  ||||  ||||||| |||| |||| |||||| ||||||    
T  22681156 tgtttgagagtttttatgaaaacaacaaataacatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttata 22681255  T
Q  328 gcttatat 335  Q
    ||||||||    
T  22681256 gcttatat 22681263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 41032926 - 41032997
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactct 299  Q
    ||||||||||| ||||| |||||||||| || ||||| |||||| | |||| |||||||||  |||||||||    
T  41032926 tgtttgagagaacttatagaaacaacttcttccatgtctataagttgttttcagcttatttccataaactct 41032997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 42420381 - 42420444
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagca 80  Q
    |||||| | ||||||||||||| |||  |||||||||||| ||||| |||||| ||||||||||    
T  42420381 tttaacgttattttatcttttgctataaaaatagcttatacgtaagcgcttatcatgataagca 42420444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 1939337 - 1939395
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    ||||||||||||||||||| |||||| |||| | ||||| || ||||||||| ||||||    
T  1939337 tgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaaca 1939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 10198489 - 10198543
Alignment:
Q  137 cataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    ||||||||||| |||||||||| |||| | ||||||||||||| |||| ||||||    
T  10198489 cataagctgttgtcagcttatttccataatctctctaggatagattataaaaaca 10198543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 32821874 - 32821816
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaaca 191  Q
    |||||||||||||||||||| ||||| | || | |||| ||||||||||||| ||||||    
T  32821874 tgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaaca 32821816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 334
Target Start/End: Complemental strand, 35486016 - 35485910
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||||||| ||||   || |||||||| | ||||| ||||| | |||| |||| ||||  |||  ||||  || |||||||||||||||||||||||    
T  35486016 tgtttgagagaacttactaaagcaacttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaacaacttata 35485917  T
Q  328 gcttata 334  Q
    |||||||    
T  35485916 gcttata 35485910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 39567886 - 39567824
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagc 79  Q
    |||||||| ||||||||||||| ||| |||||| ||||||   |||||||||| |||||||||    
T  39567886 tttaactttattttatcttttgttatagaaatatcttatacacaagtgcttatcatgataagc 39567824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 7103500 - 7103565
Alignment:
Q  275 ttttaagcttatttagataaactctctagaatagcttat-aaaaacaacttatagcttatattaaa 339  Q
    |||| |||||||||  | ||||||||||  ||||||||| ||||||| ||||||||||||||||||    
T  7103500 tttttagcttattttcacaaactctctaagatagcttatgaaaaacagcttatagcttatattaaa 7103565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 12795722 - 12795677
Alignment:
Q  60 aagtgcttatgatgataagcacttgggctagaaactgcaaataaac 105  Q
    |||||||||| |||||||||||||  |||| |||||||||||||||    
T  12795722 aagtgcttatcatgataagcacttatgctataaactgcaaataaac 12795677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 14316123 - 14316176
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||||||||||||||||||||| |||| | |||||| | |||| |||||||||    
T  14316123 gagagcttatggaaacaacttatgacatatgtataagctgttttcagcttattt 14316176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 33502744 - 33502703
Alignment:
Q  292 taaactctctagaatagcttataaaaacaacttatagcttat 333  Q
    |||||||||||| ||| |||||||||||| ||||||||||||    
T  33502744 taaactctctaggataacttataaaaacagcttatagcttat 33502703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 41809224 - 41809305
Alignment:
Q  236 agagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaa 317  Q
    ||||||| |||||||||||||| ||||||| ||||| | |||| |||||||||  |||| || ||||  ||||||| |||||    
T  41809224 agagcttgtggaaacaacttatgacatgttcataagttgtttttagcttatttccataagctttctaagatagcttgtaaaa 41809305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 9478398 - 9478362
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgt 264  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  9478398 tgtttgagagagtttatgcaaacaacttattacatgt 9478362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 23747287 - 23747235
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttat 69  Q
    ||||| ||||||||||||||||||||  ||||||||||||  |||||| ||||    
T  23747287 tttaaattcattttatcttttgatataaaaatagcttatacataagtgtttat 23747235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 30552614 - 30552722
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggt-attttaagcttatttagataaactctctagaatagcttataaaaacaacttat 326  Q
    ||||||||| || |||| |||||||||||| ||||||  ||||| |  |||| |||||||||  |||| |||||||| |||| |||| |||| || ||||    
T  30552614 tgtttgagataggttatcgaaacaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaataatttat 30552713  T
Q  327 agcttatat 335  Q
    |||| ||||    
T  30552714 agctgatat 30552722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 34652041 - 34652097
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaa 189  Q
    ||||||||||||||||||| |||||| |||| | ||||| | |||||||||| ||||    
T  34652041 tgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 35555226 - 35555166
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    |||||||||||||||||| |||||  |||||||||| | ||||  |||||| |||||||||    
T  35555226 tgtttgagagagcttatgaaaacagattattacatgatcataaactattttcagcttattt 35555166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 15438059 - 15437966
Alignment:
Q  231 ttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactt 324  Q
    ||||||||| ||||||||||||||||| ||||||| ||||| || ||| |||||||||   ||||||||| || ||||| ||| ||||||||||    
T  15438059 ttgagagaggttatggaaacaacttatgacatgttcataagttactttcagcttatttccgtaaactctcgaggatagcctatgaaaacaactt 15437966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 15581355 - 15581246
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    ||||||||  |||||| ||||||||||||||| |||||| |||||| | |||| ||| |||||  |||| | |||||| ||| |||||||||| | ||||    
T  15581355 attgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttcagcctatttctataagccctctagcataccttataaaaaaagctta 15581256  T
Q  326 tagcttatat 335  Q
    ||||||||||    
T  15581255 tagcttatat 15581246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 25005766 - 25005875
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtt-ta-taaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    |||||| ||||||||||| ||||||||||| || |  | || |||| |||||||||||| |||  |||| ||||| || ||||||||| |||||||||||    
T  25005766 tgtttgggagagcttatgaaaacaacttatgactttctatagtaagatattttaagcttgtttttataagctctccaggatagcttatgaaaacaactta 25005865  T
Q  326 tagcttatat 335  Q
    ||||||||||    
T  25005866 tagcttatat 25005875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 27963337 - 27963438
Alignment:
Q  224 aaattgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaact 323  Q
    ||||||||||||| |||||||   |||| ||||| ||||||  ||||| | |||| |||||||||| |||| ||||| | |||||||||| |||||||||    
T  27963337 aaattgtttgagaaagcttatattaacagcttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaact 27963436  T
Q  324 ta 325  Q
    ||    
T  27963437 ta 27963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 334
Target Start/End: Complemental strand, 3924721 - 3924617
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    ||||||| | |||||| |||||| |||| | ||||||||||| | ||||  ||||||||  |||||||||  || ||||||||||||||||||| ||||     
T  3924721 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaactaataga 3924622  T
Q  330 ttata 334  Q
    |||||    
T  3924621 ttata 3924617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 4482029 - 4481969
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||| | |||| |||||||||    
T  4482029 tgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattt 4481969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 43722137 - 43722220
Alignment:
Q  236 agagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaac 319  Q
    |||||||| ||||||||||||  ||||||||||||| | || | || ||||||  |||| |||||||||||||||||| |||||    
T  43722137 agagcttacggaaacaacttacgacatgtttataagcttttctcagtttattttaataagctctctagaatagcttatgaaaac 43722220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 332
Target Start/End: Complemental strand, 1662670 - 1662568
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    |||| ||||||||| ||||||||||||| ||||||  ||||  |||||| || ||||||  |||| ||||| ||||| ||||||||||||  || |||||    
T  1662670 tttgcgagagcttacggaaacaacttatgacatgtccataaaatatttttagtttattttcataagctctccagaattgcttataaaaaccgctaatagc 1662571  T
Q  330 tta 332  Q
    |||    
T  1662570 tta 1662568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 335
Target Start/End: Complemental strand, 25479671 - 25479573
Alignment:
Q  237 gagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    ||||||||| ||| |  |||| ||||||| || || | |||| |||||||||  |||| |||||||| ||||||||| ||||||||||||||| |||||    
T  25479671 gagcttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatat 25479573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 230 - 335
Target Start/End: Complemental strand, 3224520 - 3224415
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    |||||||||  ||||  |||| |||||| ||||||  ||||| | || | |||||||||  ||||  |||||||||||||||||||||||| | ||||||    
T  3224520 tttgagagaatttatacaaactacttatgacatgtccataagttgttctcagcttattttcataagttctctagaatagcttataaaaacaccctatagc 3224421  T
Q  330 ttatat 335  Q
    ||||||    
T  3224420 ttatat 3224415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 230 - 327
Target Start/End: Complemental strand, 27140575 - 27140478
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||||||| ||| ||||||| ||||| ||||||  ||||| | |||| |||||||||  |||| ||||| |  |||||||||||||||| ||||||    
T  27140575 tttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 6279464 - 6279408
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaa 189  Q
    |||||||||| |||||||||| |||| |||| | |||||||||||||||||| ||||    
T  6279464 tgtccataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaa 6279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 6977023 - 6976952
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctc 300  Q
    |||||| ||||||| ||||||||||||||| ||||||| ||||| | |||||| |||||||  ||||||||||    
T  6977023 tgtttgcgagagctaatggaaacaacttatgacatgttcataagctgttttaa-cttatttccataaactctc 6976952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 326
Target Start/End: Original strand, 7356507 - 7356606
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactta 325  Q
    |||||||||||||| ||||  ||||||||||| ||||||||||||| ||  || | |||||||| |||||||||||  ||    ||||||||||||||||    
T  7356507 attgtttgagagagtttataaaaacaacttatgacatgtttataagatagattcaacttattta-ataaactctcttaaacgcgttataaaaacaactta 7356605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 42556641 - 42556709
Alignment:
Q  267 ataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    ||||| |||||| || ||||| | |||||||||| |  ||||||||| |||||||||||||||||||||    
T  42556641 ataagttattttcagtttattgatataaactctccatgatagcttatgaaaacaacttatagcttatat 42556709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 49521774 - 49521818
Alignment:
Q  226 attgtttgagagagcttatggaaacaacttattacatgtttataa 270  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||    
T  49521774 attgtttgagagagcttgtggaaacaacttatgacatgttcataa 49521818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 327
Target Start/End: Complemental strand, 23407526 - 23407431
Alignment:
Q  232 tgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    ||||||||||||| |||| | ||||| ||||||  ||| | ||| || | |||| || |||||||||||||||||| ||||| |||||| ||||||    
T  23407526 tgagagagcttattgaaatagcttatgacatgtccataggctatgttcaacttaatttgataaactctctagaataacttatgaaaacagcttata 23407431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 327
Target Start/End: Original strand, 33185929 - 33186027
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttata 327  Q
    |||||||||||| ||||| |||||| |||| |||| |  ||||  | |||| | |||||||| ||| | ||||||| |||||||||||||||||||||||    
T  33185929 tgtttgagagagtttatgaaaacaaattatgacatttccataacctgttttcaacttatttacatata-tctctaggatagcttataaaaacaacttata 33186027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 33339507 - 33339546
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttata 56  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  33339507 tttaacttcattttatcttttggtatagaaatagcttata 33339546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 43029380 - 43029463
Alignment:
Q  235 gagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaa 318  Q
    ||||||||||| |||||  ||||||||||| |||||| |||||| |||||||||  |||| || |  |||||||||||| ||||    
T  43029380 gagagcttatgaaaacagtttattacatgtctataagctattttcagcttatttccataagctttaaagaatagcttatgaaaa 43029463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 45205133 - 45205074
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    ||||| |||| ||||||||||||||| |||||||||||  | |||||||||| |||||||    
T  45205133 tgtccctaagttgttttcagcttatttccatgaactctacatgatagcttatgaaaacaa 45205074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 9572195 - 9572281
Alignment:
Q  17 tttaacttcattttatcttttgatatggaaatagcttatatgtaagtgcttatgatgataagcacttgggctagaaactgcaaataa 103  Q
    |||||||| ||||||||||||| ||| ||||||||| |||  | || ||| || |||||| ||||||| |||| || ||||||||||    
T  9572195 tttaactttattttatcttttgctatagaaatagctaatacattagcgctgatcatgataggcacttgtgctataagctgcaaataa 9572281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 28689423 - 28689532
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttata--aaaacaactta 325  Q
    ||||| ||||| |||| ||||||| ||||| ||||||  ||||| | |||| |||||||||  |||| || || |  ||||||||||  |||||||||||    
T  28689423 tgttttagagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaactta 28689522  T
Q  326 tagcttatat 335  Q
    ||||||||||    
T  28689523 tagcttatat 28689532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 335
Target Start/End: Complemental strand, 6262835 - 6262731
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagc 329  Q
    |||| ||||||||||| ||| ||||||| | ||||  ||||| | ||||||||||||||  || |||||||||  | |||| ||||||| | ||||||||    
T  6262835 tttgggagagcttatgaaaataacttatgatatgtccataagttgttttaagcttatttctatgaactctctattacagctgataaaaa-agcttatagc 6262737  T
Q  330 ttatat 335  Q
    ||||||    
T  6262736 ttatat 6262731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 11639395 - 11639472
Alignment:
Q  236 agagcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttat 313  Q
    |||||||||| ||||| ||||| ||||||  ||||| | |||| |||||||||  |||| |||||||||||| |||||    
T  11639395 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctctagaataacttat 11639472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 47598428 - 47598485
Alignment:
Q  135 tccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||||||| |||||||||||| || |||| | ||||| |||||||||||| |||||||    
T  47598428 tccataagttgttttcagcttgttgccataagctctccaggatagcttatgaaaacaa 47598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 6659566 - 6659506
Alignment:
Q  275 ttttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||| ||||||||| ||||| |||||| |  |||||||| |||||| ||||||||||||||    
T  6659566 ttttcagcttatttcgataagctctcttggttagcttatgaaaacatcttatagcttatat 6659506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 12477292 - 12477348
Alignment:
Q  133 tgtccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaa 189  Q
    |||||||||| ||||||||||||||| ||||  |||||| | |||||||||| ||||    
T  12477292 tgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaa 12477348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 15361749 - 15361705
Alignment:
Q  291 ataaactctctagaatagcttataaaaacaacttatagcttatat 335  Q
    |||||||||| |||||| ||||| |||||| ||||||||||||||    
T  15361749 ataaactctcaagaatatcttatgaaaacagcttatagcttatat 15361705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 25479635 - 25479587
Alignment:
Q  144 tgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    |||||||||||||||  ||| | |||||||||||||||||| |||||||    
T  25479635 tgttttcagcttattttcataagctctctaggatagcttatgaaaacaa 25479587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 27820342 - 27820414
Alignment:
Q  262 tgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaacttatagcttata 334  Q
    |||| ||||| |||||| |||||||||  ||||| |||| |  |||||||||||||||| | |||||||||||    
T  27820342 tgttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttata 27820414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 29635446 - 29635386
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    |||||||||||  ||||| |||||| |||| ||||||||||||| | |||| |||||||||    
T  29635446 tgtttgagagaatttatgaaaacaagttatgacatgtttataagttgttttcagcttattt 29635386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 35925751 - 35925695
Alignment:
Q  137 cataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaaa 193  Q
    ||||||||||||||| |||||| |||| ||||||| | ||||||||||  |||||||    
T  35925751 cataagctgttttcaacttatttccataaactctccatgatagcttatggaaacaaa 35925695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 37241624 - 37241664
Alignment:
Q  230 tttgagagagcttatggaaacaacttattacatgtttataa 270  Q
    |||| ||||||||||||||||||||||| ||||||| ||||    
T  37241624 tttgggagagcttatggaaacaacttataacatgttcataa 37241664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 9608 - 9668
Alignment:
Q  228 tgtttgagagagcttatggaaacaacttattacatgtttataaggtattttaagcttattt 288  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||| | |||| |||||||||    
T  9608 tgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattt 9668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 306414 - 306329
Alignment:
Q  239 gcttatggaaacaacttattacatgtttataaggtattttaagcttatttagataaactctctagaatagcttataaaaacaactt 324  Q
    ||||||||||||| ||||| |||||   ||||| | |||| |||||| ||| |||| |||||||| ||||||||| ||||||||||    
T  306414 gcttatggaaacagcttatgacatgcccataagctgttttcagcttacttacataagctctctaggatagcttatgaaaacaactt 306329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 306388 - 306332
Alignment:
Q  136 ccataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 192  Q
    ||||||||||||||||||||| |  ||| | |||||||||||||||||| |||||||    
T  306388 ccataagctgttttcagcttacttacataagctctctaggatagcttatgaaaacaa 306332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 27088 - 27017
Alignment:
Q  111 ctgtttgagagagcttacgtcgtgtccataagctgttttcagcttattaccatgaactctctaggatagctt 182  Q
    ||||||| ||||||||| | | ||| ||||| |||||||||||||||| |||| | ||||||| ||||||||    
T  27088 ctgtttgcgagagcttatgacatgtgcataaactgttttcagcttatttccataagctctctatgatagctt 27017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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