View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12538_low_5 (Length: 569)

Name: NF12538_low_5
Description: NF12538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12538_low_5
NF12538_low_5
[»] chr1 (57 HSPs)
chr1 (222-476)||(52439143-52439404)
chr1 (222-550)||(49619601-49619938)
chr1 (222-476)||(49618428-49618689)
chr1 (241-476)||(40778388-40778630)
chr1 (222-331)||(38451549-38451658)
chr1 (222-456)||(40779528-40779762)
chr1 (222-390)||(38451659-38451827)
chr1 (222-352)||(52437905-52438035)
chr1 (222-301)||(25787204-25787283)
chr1 (222-300)||(25785965-25786043)
chr1 (230-301)||(48467266-48467337)
chr1 (222-300)||(13929292-13929370)
chr1 (222-300)||(47411489-47411567)
chr1 (498-550)||(40779422-40779474)
chr1 (225-300)||(13930716-13930791)
chr1 (222-281)||(16218538-16218597)
chr1 (362-456)||(45042746-45042840)
chr1 (222-297)||(47560136-47560211)
chr1 (222-300)||(14071244-14071322)
chr1 (238-300)||(21246516-21246578)
chr1 (238-300)||(43808562-43808624)
chr1 (238-306)||(34531676-34531744)
chr1 (225-281)||(34653435-34653491)
chr1 (222-281)||(44977218-44977277)
chr1 (238-300)||(2236826-2236888)
chr1 (238-300)||(9822665-9822726)
chr1 (238-300)||(30743100-30743162)
chr1 (238-300)||(35683068-35683130)
chr1 (234-300)||(48934250-48934316)
chr1 (238-300)||(48935151-48935213)
chr1 (223-301)||(49139799-49139877)
chr1 (239-300)||(13641271-13641332)
chr1 (505-550)||(40778666-40778711)
chr1 (222-299)||(47136729-47136806)
chr1 (224-277)||(48467595-48467648)
chr1 (401-469)||(51694372-51694440)
chr1 (222-281)||(21276991-21277050)
chr1 (222-277)||(33793776-33793831)
chr1 (362-456)||(40721921-40722016)
chr1 (222-281)||(44979432-44979491)
chr1 (222-301)||(47410981-47411060)
chr1 (222-281)||(52181365-52181424)
chr1 (222-281)||(52741485-52741544)
chr1 (222-281)||(52743036-52743095)
chr1 (238-300)||(2238019-2238081)
chr1 (238-300)||(9119815-9119877)
chr1 (238-300)||(10579653-10579715)
chr1 (238-300)||(26056188-26056250)
chr1 (222-300)||(37624611-37624689)
chr1 (234-296)||(40135382-40135444)
chr1 (491-541)||(40187891-40187941)
chr1 (400-442)||(49801877-49801919)
chr1 (238-300)||(50679862-50679924)
chr1 (238-279)||(38458099-38458140)
chr1 (238-298)||(9123442-9123502)
chr1 (223-299)||(9633773-9633849)
chr1 (401-469)||(47533725-47533791)
[»] chr7 (77 HSPs)
chr7 (222-476)||(4973913-4974168)
chr7 (222-469)||(22794195-22794440)
chr7 (238-476)||(29657002-29657248)
chr7 (222-414)||(4973510-4973702)
chr7 (230-416)||(32894721-32894908)
chr7 (222-474)||(29658475-29658732)
chr7 (239-413)||(32893470-32893645)
chr7 (370-468)||(46203526-46203625)
chr7 (222-300)||(22061836-22061914)
chr7 (222-300)||(43006382-43006460)
chr7 (222-300)||(43930316-43930394)
chr7 (222-300)||(4858385-4858463)
chr7 (222-300)||(25153655-25153733)
chr7 (222-300)||(40926560-40926638)
chr7 (362-476)||(29409098-29409217)
chr7 (369-476)||(36395957-36396071)
chr7 (222-300)||(22744743-22744821)
chr7 (244-300)||(7146799-7146855)
chr7 (265-309)||(23153662-23153706)
chr7 (258-349)||(47535692-47535783)
chr7 (222-309)||(16955689-16955776)
chr7 (234-300)||(17287083-17287149)
chr7 (222-309)||(43704484-43704571)
chr7 (222-445)||(47536747-47536969)
chr7 (238-300)||(7148099-7148161)
chr7 (222-300)||(19279653-19279731)
chr7 (222-300)||(33459584-33459662)
chr7 (238-300)||(41126252-41126314)
chr7 (222-276)||(44114720-44114774)
chr7 (238-300)||(47537081-47537143)
chr7 (224-300)||(4857200-4857276)
chr7 (491-550)||(4973829-4973889)
chr7 (362-469)||(19218853-19218960)
chr7 (222-281)||(18802449-18802508)
chr7 (222-309)||(36584937-36585024)
chr7 (362-476)||(45398665-45398783)
chr7 (223-281)||(25154996-25155054)
chr7 (238-300)||(30224017-30224079)
chr7 (265-303)||(33070645-33070683)
chr7 (222-272)||(35128231-35128281)
chr7 (238-300)||(36673877-36673939)
chr7 (238-300)||(40881104-40881166)
chr7 (238-300)||(41616637-41616699)
chr7 (222-300)||(43931907-43931985)
chr7 (241-299)||(45721808-45721866)
chr7 (239-300)||(14206687-14206748)
chr7 (239-300)||(14215377-14215438)
chr7 (222-299)||(22060460-22060537)
chr7 (223-300)||(22746361-22746438)
chr7 (231-300)||(23350926-23350995)
chr7 (498-550)||(22794117-22794169)
chr7 (491-550)||(29657270-29657330)
chr7 (230-281)||(14109129-14109180)
chr7 (230-281)||(14419086-14419137)
chr7 (238-281)||(34558361-34558404)
chr7 (242-309)||(38002546-38002613)
chr7 (239-306)||(41127206-41127273)
chr7 (266-309)||(46196897-46196940)
chr7 (270-309)||(46203686-46203725)
chr7 (222-281)||(46674994-46675053)
chr7 (238-296)||(2904092-2904150)
chr7 (238-300)||(17288261-17288323)
chr7 (238-300)||(19069930-19069992)
chr7 (222-300)||(19278350-19278428)
chr7 (238-300)||(21171527-21171589)
chr7 (238-300)||(29344177-29344239)
chr7 (238-300)||(38001517-38001579)
chr7 (222-300)||(40930415-40930493)
chr7 (223-281)||(41516404-41516462)
chr7 (222-300)||(43007690-43007768)
chr7 (222-300)||(46457067-46457145)
chr7 (505-550)||(32893724-32893769)
chr7 (247-300)||(46673512-46673565)
chr7 (274-306)||(16957441-16957473)
chr7 (238-290)||(19105587-19105639)
chr7 (370-418)||(29408391-29408439)
chr7 (229-293)||(42520227-42520290)
[»] chr5 (59 HSPs)
chr5 (223-476)||(14357740-14358000)
chr5 (222-476)||(30915976-30916237)
chr5 (223-456)||(33362451-33362685)
chr5 (241-456)||(14356448-14356662)
chr5 (222-337)||(30912311-30912426)
chr5 (222-445)||(42962020-42962242)
chr5 (222-300)||(12936143-12936221)
chr5 (266-337)||(9038502-9038573)
chr5 (222-301)||(19523980-19524059)
chr5 (222-281)||(19525348-19525407)
chr5 (222-300)||(12950301-12950379)
chr5 (238-299)||(39134680-39134741)
chr5 (222-306)||(19825871-19825955)
chr5 (222-281)||(12933748-12933807)
chr5 (222-301)||(27894063-27894142)
chr5 (222-281)||(41905172-41905231)
chr5 (258-309)||(42963247-42963298)
chr5 (223-301)||(224630-224708)
chr5 (222-300)||(8762441-8762519)
chr5 (238-300)||(11907202-11907264)
chr5 (222-300)||(18677973-18678051)
chr5 (222-300)||(19827181-19827259)
chr5 (498-550)||(14357660-14357712)
chr5 (370-441)||(30915642-30915714)
chr5 (222-281)||(328214-328273)
chr5 (222-281)||(6629728-6629787)
chr5 (222-281)||(12947909-12947968)
chr5 (222-300)||(1273086-1273164)
chr5 (238-300)||(4568015-4568077)
chr5 (222-300)||(5382939-5383017)
chr5 (238-296)||(23679160-23679218)
chr5 (238-296)||(23855594-23855652)
chr5 (362-476)||(30673457-30673578)
chr5 (222-284)||(40059385-40059447)
chr5 (239-300)||(20991690-20991751)
chr5 (498-550)||(30915765-30915817)
chr5 (223-281)||(223223-223282)
chr5 (238-300)||(19050762-19050824)
chr5 (238-305)||(20841827-20841894)
chr5 (222-281)||(26403304-26403363)
chr5 (362-456)||(30674714-30674809)
chr5 (491-549)||(33362363-33362422)
chr5 (238-305)||(36442238-36442305)
chr5 (238-300)||(1155982-1156044)
chr5 (222-300)||(5384387-5384465)
chr5 (238-300)||(10570361-10570423)
chr5 (238-300)||(15509208-15509270)
chr5 (238-300)||(15510304-15510366)
chr5 (238-300)||(21387650-21387712)
chr5 (238-300)||(24070418-24070480)
chr5 (222-300)||(39135689-39135767)
chr5 (238-300)||(42382151-42382213)
chr5 (243-300)||(22650669-22650726)
chr5 (239-300)||(24071484-24071545)
chr5 (245-300)||(641921-641976)
chr5 (222-298)||(1273383-1273459)
chr5 (222-254)||(1663184-1663216)
chr5 (401-456)||(4032002-4032058)
chr5 (238-306)||(20988703-20988771)
[»] chr8 (59 HSPs)
chr8 (222-476)||(11080890-11081151)
chr8 (242-441)||(42307513-42307712)
chr8 (223-348)||(42314809-42314934)
chr8 (222-300)||(31623903-31623981)
chr8 (237-300)||(16346111-16346174)
chr8 (222-300)||(36756061-36756139)
chr8 (231-301)||(37324728-37324798)
chr8 (222-300)||(38591048-38591126)
chr8 (222-300)||(41867957-41868035)
chr8 (222-300)||(43386743-43386821)
chr8 (222-299)||(36940075-36940152)
chr8 (362-441)||(35462888-35462968)
chr8 (222-298)||(38790296-38790372)
chr8 (234-300)||(39244-39310)
chr8 (222-281)||(10053804-10053863)
chr8 (222-297)||(37323345-37323420)
chr8 (238-300)||(12818767-12818829)
chr8 (363-456)||(20066216-20066310)
chr8 (222-300)||(43277962-43278040)
chr8 (494-550)||(42307759-42307815)
chr8 (419-463)||(42314696-42314740)
chr8 (222-297)||(117045-117120)
chr8 (238-301)||(162640-162703)
chr8 (238-297)||(22914234-22914293)
chr8 (222-281)||(36070175-36070234)
chr8 (222-281)||(36071438-36071497)
chr8 (222-281)||(38589818-38589876)
chr8 (222-281)||(43275747-43275806)
chr8 (222-340)||(43414378-43414496)
chr8 (222-309)||(43416000-43416087)
chr8 (238-300)||(9189407-9189469)
chr8 (238-300)||(24068343-24068405)
chr8 (222-300)||(29739684-29739762)
chr8 (222-300)||(37472400-37472478)
chr8 (222-300)||(37474077-37474155)
chr8 (223-300)||(19913490-19913567)
chr8 (491-550)||(11080808-11080868)
chr8 (222-301)||(37982-38061)
chr8 (237-300)||(4534046-4534109)
chr8 (241-300)||(9190483-9190542)
chr8 (222-281)||(16363872-16363931)
chr8 (515-550)||(16497115-16497150)
chr8 (241-300)||(31625425-31625484)
chr8 (225-300)||(39325875-39325950)
chr8 (222-281)||(39544927-39544986)
chr8 (445-476)||(42307703-42307734)
chr8 (364-456)||(12818892-12818986)
chr8 (238-300)||(12820139-12820201)
chr8 (238-300)||(21524635-21524697)
chr8 (222-300)||(35945478-35945556)
chr8 (222-300)||(39546718-39546796)
chr8 (222-300)||(41866891-41866969)
chr8 (222-279)||(3237702-3237759)
chr8 (239-300)||(6843769-6843830)
chr8 (231-300)||(10398676-10398745)
chr8 (224-281)||(14820192-14820249)
chr8 (266-306)||(20066118-20066158)
chr8 (265-301)||(36757270-36757306)
chr8 (222-306)||(39323784-39323868)
[»] chr3 (76 HSPs)
chr3 (222-476)||(14206639-14206899)
chr3 (222-476)||(14214387-14214647)
chr3 (222-476)||(48337986-48338236)
chr3 (222-413)||(48336344-48336535)
chr3 (266-456)||(8895197-8895388)
chr3 (238-352)||(14213145-14213259)
chr3 (222-300)||(25583111-25583189)
chr3 (222-300)||(41387474-41387552)
chr3 (222-301)||(53809533-53809612)
chr3 (266-350)||(50719696-50719781)
chr3 (266-350)||(50793067-50793152)
chr3 (222-300)||(17350143-17350221)
chr3 (238-300)||(19579233-19579295)
chr3 (222-299)||(8371217-8371294)
chr3 (222-299)||(41386127-41386204)
chr3 (238-298)||(45730650-45730710)
chr3 (222-281)||(42632703-42632762)
chr3 (222-281)||(42633946-42634005)
chr3 (222-281)||(53808315-53808374)
chr3 (238-300)||(5416211-5416273)
chr3 (222-300)||(8372657-8372735)
chr3 (222-300)||(10987694-10987772)
chr3 (222-300)||(26798947-26799025)
chr3 (222-300)||(32980493-32980571)
chr3 (222-300)||(51825662-51825740)
chr3 (222-300)||(54752613-54752691)
chr3 (223-300)||(39133015-39133092)
chr3 (238-306)||(52293558-52293626)
chr3 (362-456)||(2763970-2764065)
chr3 (222-293)||(21247233-21247304)
chr3 (222-301)||(25585873-25585952)
chr3 (238-300)||(1031829-1031891)
chr3 (238-300)||(32973152-32973214)
chr3 (238-300)||(32974264-32974326)
chr3 (238-300)||(33000841-33000903)
chr3 (222-300)||(36626728-36626806)
chr3 (238-300)||(48035365-48035427)
chr3 (238-300)||(50150734-50150796)
chr3 (238-300)||(51401392-51401454)
chr3 (238-300)||(53047910-53047972)
chr3 (222-300)||(54654007-54654085)
chr3 (238-301)||(2225064-2225127)
chr3 (231-291)||(18024576-18024636)
chr3 (231-291)||(30385192-30385252)
chr3 (231-291)||(42592411-42592471)
chr3 (364-456)||(50002552-50002643)
chr3 (222-306)||(50003258-50003342)
chr3 (238-281)||(5417108-5417151)
chr3 (238-281)||(11483047-11483090)
chr3 (238-297)||(39530808-39530867)
chr3 (222-301)||(47808146-47808225)
chr3 (222-301)||(49122042-49122121)
chr3 (238-281)||(52292607-52292650)
chr3 (241-300)||(53342732-53342791)
chr3 (223-301)||(11219428-11219506)
chr3 (238-300)||(12062425-12062487)
chr3 (222-280)||(17345308-17345366)
chr3 (238-300)||(19579335-19579397)
chr3 (223-281)||(19622003-19622061)
chr3 (498-540)||(36627198-36627240)
chr3 (238-300)||(39287483-39287545)
chr3 (242-300)||(39288480-39288538)
chr3 (230-300)||(43101899-43101969)
chr3 (387-456)||(46688567-46688637)
chr3 (238-300)||(48867471-48867533)
chr3 (238-300)||(53049078-53049140)
chr3 (491-541)||(54353312-54353362)
chr3 (239-281)||(55442608-55442650)
chr3 (238-300)||(55443591-55443653)
chr3 (231-300)||(17934060-17934129)
chr3 (244-297)||(19253046-19253099)
chr3 (240-297)||(32999812-32999869)
chr3 (239-300)||(52705349-52705410)
chr3 (238-349)||(2088855-2088965)
chr3 (238-306)||(7583483-7583551)
chr3 (239-303)||(53901583-53901647)
[»] chr4 (85 HSPs)
chr4 (233-456)||(49923649-49923873)
chr4 (222-413)||(54372743-54372934)
chr4 (222-476)||(37642395-37642660)
chr4 (222-413)||(54373880-54374071)
chr4 (243-476)||(49922525-49922765)
chr4 (248-477)||(5546940-5547172)
chr4 (275-446)||(20945371-20945543)
chr4 (222-445)||(21570320-21570542)
chr4 (222-281)||(11115040-11115099)
chr4 (365-446)||(20944416-20944498)
chr4 (222-300)||(27408760-27408838)
chr4 (222-300)||(37558995-37559073)
chr4 (222-300)||(37560340-37560418)
chr4 (222-300)||(43894102-43894180)
chr4 (222-279)||(49923858-49923915)
chr4 (222-281)||(6616271-6616330)
chr4 (222-300)||(33377405-33377483)
chr4 (498-550)||(54373785-54373837)
chr4 (238-297)||(5417317-5417376)
chr4 (239-290)||(5548674-5548725)
chr4 (266-309)||(21569291-21569334)
chr4 (222-281)||(29686253-29686312)
chr4 (222-281)||(39590938-39590997)
chr4 (222-281)||(47668657-47668716)
chr4 (222-300)||(86800-86878)
chr4 (238-300)||(11482809-11482871)
chr4 (222-300)||(55953893-55953971)
chr4 (223-300)||(1273474-1273550)
chr4 (238-303)||(43709912-43709977)
chr4 (369-476)||(46425862-46425973)
chr4 (238-299)||(52658924-52658985)
chr4 (222-302)||(30682717-30682797)
chr4 (498-550)||(49923543-49923595)
chr4 (238-300)||(306590-306652)
chr4 (222-301)||(11113739-11113818)
chr4 (222-301)||(21104350-21104429)
chr4 (222-281)||(35789650-35789709)
chr4 (222-281)||(39592349-39592408)
chr4 (238-300)||(46794853-46794915)
chr4 (238-300)||(2310823-2310885)
chr4 (369-476)||(5548514-5548627)
chr4 (238-300)||(12396915-12396977)
chr4 (222-300)||(15786949-15787027)
chr4 (238-300)||(23752029-23752091)
chr4 (238-296)||(26045145-26045203)
chr4 (238-300)||(26376342-26376404)
chr4 (238-300)||(29833385-29833447)
chr4 (231-305)||(32617227-32617301)
chr4 (222-300)||(46796067-46796145)
chr4 (238-300)||(47573685-47573747)
chr4 (224-309)||(42713462-42713547)
chr4 (498-550)||(5547181-5547233)
chr4 (266-349)||(31204595-31204678)
chr4 (233-309)||(31205741-31205817)
chr4 (244-300)||(35787815-35787871)
chr4 (491-550)||(37642315-37642375)
chr4 (238-281)||(96741-96784)
chr4 (222-281)||(10403277-10403335)
chr4 (222-301)||(31711089-31711168)
chr4 (234-305)||(36611056-36611127)
chr4 (222-293)||(38371853-38371924)
chr4 (238-281)||(38555336-38555379)
chr4 (222-281)||(44128394-44128453)
chr4 (222-300)||(15787543-15787621)
chr4 (230-300)||(28103527-28103597)
chr4 (223-285)||(28589782-28589844)
chr4 (222-276)||(29688039-29688093)
chr4 (222-300)||(33376215-33376293)
chr4 (223-301)||(38553927-38554005)
chr4 (279-340)||(44217627-44217688)
chr4 (222-300)||(44305020-44305098)
chr4 (363-456)||(48499507-48499598)
chr4 (238-300)||(50498013-50498075)
chr4 (231-300)||(32617575-32617644)
chr4 (238-303)||(47242965-47243030)
chr4 (239-300)||(47244031-47244092)
chr4 (239-300)||(47572600-47572661)
chr4 (239-300)||(48413592-48413653)
chr4 (251-299)||(5688679-5688727)
chr4 (238-306)||(15445449-15445517)
chr4 (233-281)||(40143662-40143710)
chr4 (491-550)||(49922786-49922846)
chr4 (239-306)||(52880827-52880895)
chr4 (241-281)||(52981210-52981250)
chr4 (240-300)||(53400200-53400260)
[»] chr6 (46 HSPs)
chr6 (223-456)||(682263-682497)
chr6 (222-456)||(683426-683659)
chr6 (1-83)||(9665829-9665908)
chr6 (165-213)||(9665466-9665514)
chr6 (222-300)||(31738360-31738438)
chr6 (222-302)||(8411083-8411163)
chr6 (238-300)||(1757535-1757597)
chr6 (222-300)||(5311276-5311354)
chr6 (222-281)||(33802077-33802136)
chr6 (222-300)||(8412357-8412435)
chr6 (234-300)||(8447230-8447296)
chr6 (234-300)||(8456034-8456100)
chr6 (222-298)||(27108217-27108293)
chr6 (222-298)||(27150014-27150090)
chr6 (222-281)||(18139547-18139606)
chr6 (237-303)||(1692086-1692152)
chr6 (243-300)||(1693022-1693079)
chr6 (368-465)||(1948861-1948958)
chr6 (239-300)||(11724337-11724398)
chr6 (239-300)||(22299944-22300005)
chr6 (404-456)||(23644263-23644316)
chr6 (231-291)||(9899571-9899631)
chr6 (238-306)||(13173050-13173118)
chr6 (238-306)||(19368553-19368621)
chr6 (266-349)||(25439099-25439182)
chr6 (231-291)||(30860319-30860379)
chr6 (223-306)||(13176368-13176451)
chr6 (258-309)||(13562328-13562379)
chr6 (266-309)||(18230363-18230406)
chr6 (371-453)||(23638574-23638657)
chr6 (222-309)||(24318096-24318183)
chr6 (238-300)||(9927619-9927681)
chr6 (243-297)||(14174121-14174175)
chr6 (243-297)||(14178657-14178711)
chr6 (498-548)||(18498261-18498311)
chr6 (238-300)||(19048262-19048324)
chr6 (238-300)||(19367730-19367792)
chr6 (275-309)||(24317099-24317133)
chr6 (238-300)||(28225437-28225499)
chr6 (238-300)||(31740313-31740375)
chr6 (505-550)||(682550-682595)
chr6 (239-300)||(18773668-18773729)
chr6 (238-299)||(26584079-26584140)
chr6 (231-300)||(30859931-30860000)
chr6 (266-306)||(10673650-10673690)
chr6 (275-303)||(25437833-25437861)
[»] chr2 (38 HSPs)
chr2 (259-456)||(20921544-20921742)
chr2 (241-455)||(12364206-12364420)
chr2 (291-469)||(12365891-12366066)
chr2 (222-300)||(20921478-20921556)
chr2 (222-300)||(42596557-42596635)
chr2 (222-300)||(37867753-37867831)
chr2 (368-445)||(370910-370986)
chr2 (239-300)||(33553406-33553467)
chr2 (238-306)||(3255913-3255981)
chr2 (238-306)||(4630119-4630187)
chr2 (230-281)||(23178942-23178993)
chr2 (230-281)||(23590199-23590250)
chr2 (222-301)||(35799509-35799588)
chr2 (243-349)||(1257507-1257613)
chr2 (238-300)||(3665237-3665299)
chr2 (222-296)||(11575500-11575574)
chr2 (222-300)||(41795993-41796071)
chr2 (258-349)||(371959-372050)
chr2 (222-300)||(7038373-7038451)
chr2 (241-306)||(33836785-33836850)
chr2 (231-300)||(39110083-39110152)
chr2 (225-300)||(2581803-2581878)
chr2 (233-300)||(3666309-3666376)
chr2 (222-281)||(32614382-32614441)
chr2 (238-281)||(33837815-33837858)
chr2 (222-285)||(35061271-35061334)
chr2 (222-300)||(7036963-7037041)
chr2 (223-281)||(10368445-10368503)
chr2 (243-297)||(11386642-11386696)
chr2 (238-300)||(12854145-12854207)
chr2 (238-300)||(20630712-20630774)
chr2 (238-300)||(29424653-29424715)
chr2 (242-300)||(39272251-39272309)
chr2 (222-300)||(42027190-42027268)
chr2 (238-299)||(6706939-6707000)
chr2 (222-271)||(28109939-28109988)
chr2 (238-279)||(30202945-30202986)
chr2 (231-291)||(36099304-36099364)
[»] scaffold0065 (3 HSPs)
scaffold0065 (222-476)||(35360-35611)
scaffold0065 (242-352)||(36735-36845)
scaffold0065 (368-476)||(36584-36685)
[»] scaffold0034 (4 HSPs)
scaffold0034 (238-388)||(98634-98784)
scaffold0034 (222-350)||(98046-98174)
scaffold0034 (490-550)||(98318-98379)
scaffold0034 (445-476)||(98264-98295)
[»] scaffold0041 (3 HSPs)
scaffold0041 (258-476)||(982-1207)
scaffold0041 (266-456)||(608-799)
scaffold0041 (238-300)||(85117-85179)
[»] scaffold0045 (1 HSPs)
scaffold0045 (225-300)||(77222-77297)
[»] scaffold0046 (2 HSPs)
scaffold0046 (222-300)||(23403-23481)
scaffold0046 (222-300)||(24856-24934)
[»] scaffold0024 (1 HSPs)
scaffold0024 (222-278)||(73049-73105)
[»] scaffold0013 (2 HSPs)
scaffold0013 (222-281)||(96157-96216)
scaffold0013 (222-300)||(96856-96934)
[»] scaffold0009 (1 HSPs)
scaffold0009 (238-300)||(205593-205655)
[»] scaffold1337 (1 HSPs)
scaffold1337 (275-420)||(282-428)
[»] scaffold0136 (1 HSPs)
scaffold0136 (363-443)||(23869-23950)
[»] scaffold1974 (1 HSPs)
scaffold1974 (222-281)||(688-747)
[»] scaffold1878 (1 HSPs)
scaffold1878 (222-281)||(527-586)
[»] scaffold0290 (2 HSPs)
scaffold0290 (222-281)||(9538-9597)
scaffold0290 (230-281)||(8384-8435)
[»] scaffold0178 (1 HSPs)
scaffold0178 (238-300)||(2306-2368)
[»] scaffold0025 (1 HSPs)
scaffold0025 (222-300)||(56741-56819)
[»] scaffold2127 (1 HSPs)
scaffold2127 (222-299)||(557-634)
[»] scaffold0084 (2 HSPs)
scaffold0084 (239-296)||(13249-13306)
scaffold0084 (224-300)||(11705-11781)
[»] scaffold0141 (1 HSPs)
scaffold0141 (401-456)||(35167-35222)
[»] scaffold0049 (1 HSPs)
scaffold0049 (401-456)||(79590-79645)
[»] scaffold0177 (1 HSPs)
scaffold0177 (238-300)||(1768-1830)
[»] scaffold0171 (1 HSPs)
scaffold0171 (498-548)||(29032-29082)
[»] scaffold0038 (1 HSPs)
scaffold0038 (238-300)||(25935-25997)


Alignment Details
Target: chr1 (Bit Score: 134; Significance: 2e-69; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 222 - 476
Target Start/End: Complemental strand, 52439404 - 52439143
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||    
T  52439404 cttaatacatcatttggtcccttaacttattttctgttttcaatttggtcctctaactattaaacgtttcaaattgatcctttatcttctttccatcatt 52439305  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-tt 420  Q
    ||||||||| | ||||||| ||||||||||| |       ||||||||||||||||||||  ||||||| |||||||| ||||||||||||| |||| ||    
T  52439304 caatttggttctattttattcattttaacacccataaaaaggagatcgttggataaatgaagtctatcagatctaactgtgtatcaccaacacctaattt 52439205  T
Q  421 attttaattttcttcatcttcttcc------ttcatcttcatacaaccttcatcaatcttca 476  Q
    | |||| ||||||||||| ||||||      |||||||||||||||||||||||||||||||    
T  52439204 actttacttttcttcatcatcttccatcactttcatcttcatacaaccttcatcaatcttca 52439143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 222 - 550
Target Start/End: Complemental strand, 49619938 - 49619601
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  49619938 cttaatacatcatttggtcccttaatttattttcagttttcaatttggtcccctaactattaaacgttccaaattggtcctttatcttctttccatcatt 49619839  T
Q  322 caatttggtcc-aattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aat 419  Q
    |||||||||||   |||||| ||||||||| ||        ||||| | || |||||||||| ||||||| || ||||| ||||||||||||| || | |    
T  49619838 caatttggtcctttttttattcattttaaccctaaaaaaaaggagaccattagataaatgaggtctatcagatttaactgtgtatcaccaacacctgatt 49619739  T
Q  420 tattttaattttcttcatcttcttccttcatcttcatacaaccttcatcaatcttca-ca-----accnnnnnnnnattctttc-aaaatttatcttttc 512  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||| ||     | |         ||||||| |||||| ||| ||||    
T  49619738 tattttacttttcttcatcttcttctctcatcttcatacaaccttcatcaatcttcatcatcttcaacttttttttgttctttcaaaaattcatcatttc 49619639  T
Q  513 aacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    |||||||||||||| |||||||||||||||||||||||    
T  49619638 aacttcaacaaaaaccacaaaatcaaacatttaaattt 49619601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 222 - 476
Target Start/End: Original strand, 49618428 - 49618689
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| |||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  49618428 cttaataaatcattcagtctcttaacttattttcagttttcattttggtcccctaactattaaacgttttaaattggtgttttatcttctttccatcatt 49618527  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca-tctaatt 420  Q
    ||||||||||  ||||||| ||||||||| | |       ||||| ||||||||||||||| ||||||| ||||||||  |||||||||||| |  | ||    
T  49618528 caatttggtcatattttattcattttaacccccaaaaaaaggagaccgttggataaatgaggtctatcagatctaactgagtatcaccaacacttgattt 49618627  T
Q  421 attttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 476  Q
    |||||| |||| |||||||| |||      ||||| ||||||||||||||||||||||||||    
T  49618628 attttactttttttcatctttttccctcatcttcaccttcatacaaccttcatcaatcttca 49618689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 241 - 476
Target Start/End: Original strand, 40778388 - 40778630
Alignment:
Q  241 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttat 340  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||  || |||||  |||||||||||||| |||||||||||||||| |||||||    
T  40778388 ccttaacttattttcagtttttaatttggtcccttaactattaaacgttctaaattggttctttatcttctttccttcattcaatttggtcctattttat 40778487  T
Q  341 ccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaattttcttcatct 439  Q
      |||||||| |||       ||||| ||||||||||||||| ||||| | |||||||| |||||||||  || || | |||||||| ||||||||||||    
T  40778488 ttattttaaccctcaagaaaaggagaccgttggataaatgaggtctattagatctaactgtgtatcaccggcacctgatttattttacttttcttcatct 40778587  T
Q  440 tcttcc------ttcatcttcatacaaccttcatcaatcttca 476  Q
    ||||||      ||||||||||||||||||| |||||||||||    
T  40778588 tcttccctcattttcatcttcatacaacctttatcaatcttca 40778630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 331
Target Start/End: Original strand, 38451549 - 38451658
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||||    
T  38451549 cttaatacatcatttggtcccttaacttattttatgttttcaatttggtcccctaactattaaacgttccaaattggtactttatcttctttccatcatt 38451648  T
Q  322 caatttggtc 331  Q
    ||||||||||    
T  38451649 caatttggtc 38451658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 222 - 456
Target Start/End: Complemental strand, 40779762 - 40779528
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||| ||| ||||||||| |||||||||||||||||||| |||  |||| |||||||||||| || |||||| |||||||| ||| ||| |||    
T  40779762 cttaatacatcgtttggtcccttaatttattttcagttttcaatttagtcatctaattattaaacgttttaaattggtcatttatcttattttcattatt 40779663  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aatt 420  Q
    ||| ||||||| ||||||| ||||||||| | |       ||||| |||||||||| |||| ||||||| ||| |  | ||||||||||||| || | ||    
T  40779662 caagttggtcctattttattcattttaacccccaaaaaaaggagaccgttggataagtgaggtctatcatatcaatttgtgtatcaccaacacctgattt 40779563  T
Q  421 attttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||||  ||| ||||||||||| | ||||||||||    
T  40779562 attttacattt-ttcatcttctttcctcatcttcat 40779528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 390
Target Start/End: Complemental strand, 38451827 - 38451659
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||||| |||  ||||||||||||  ||||||||||||||  |||||||||||||||||  || |||||| || ||||||||| |||||||    
T  38451827 cttaatacatcatttggtcatttaacttattttttgttttcaatttggtatcctaactattaaacgttctaaattggtccttcatcttcttttcatcatt 38451728  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatca 390  Q
    ||||||||||  ||||||| ||||||||||  |       ||||||||||||||||||||  |||||||    
T  38451727 caatttggtcatattttattcattttaacatcctaaaaaaggagatcgttggataaatgaagtctatca 38451659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 222 - 352
Target Start/End: Original strand, 52437905 - 52438035
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||| | |||  ||||||||||||| ||||||||||||||| | ||||||||||| |||| || |||||| |||||||||||| |||||||    
T  52437905 cttaatacatcatatggtcttttaacttattttctgttttcaatttggtctcttaactattaaatgttttaaattggtcatttatcttctttacatcatt 52438004  T
Q  322 caatttggtccaattttatccattttaacac 352  Q
     |||||||||| |||||||  ||||||||||    
T  52438005 taatttggtcctattttatttattttaacac 52438035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 25787283 - 25787204
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  || ||||||||||||    
T  25787283 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtct 25787204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 25785965 - 25786043
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  || |||||||||||    
T  25785965 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtc 25786043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 48467266 - 48467337
Alignment:
Q  230 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| |||||||||||||||||  |||||||||||||| |||||||||| ||  |||||||||||||||    
T  48467266 atcatttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtct 48467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 13929292 - 13929370
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||| ||||||| ||  || |||||||||||    
T  13929292 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtc 13929370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 47411567 - 47411489
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||| |||||| ||||||| |||||||||| ||  || |||||||||||    
T  47411567 cttaatacatcatttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtc 47411489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 550
Target Start/End: Complemental strand, 40779474 - 40779422
Alignment:
Q  498 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||||||||||    
T  40779474 aaaattcatcatttcaacttcaacaaaaaccacaaaatcaaacatttaaattt 40779422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 13930791 - 13930716
Alignment:
Q  225 aatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||| ||||||| |||||||||||||||||  |||||||||||||||| |||||||| ||  || |||||||||||    
T  13930791 aatacatcatttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtc 13930716  T

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Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 16218597 - 16218538
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||||||||||||||||||||| ||||||| ||||||| || || ||||||||||||    
T  16218597 cttaatagatcatttagtcccttaatttatttttagttttctatctgatcccctaactat 16218538  T

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Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 45042746 - 45042840
Alignment:
Q  362 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||| ||||||||||||||| | ||||| |||||||  ||||||| |||||||||| |||||||| | || ||||||||||||| ||||||||||    
T  45042746 ggagaccgttggataaatgaggtatatcagatctaaccgtgtatcatcaacatctaatttattttactattattcatcttcttcc-tcatcttcat 45042840  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 47560136 - 47560211
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    ||||||| ||||||| |||||||| |||||||||  |||||| ||||||||||||||||| ||  |||||||||||    
T  47560136 cttaatacatcatttggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttg 47560211  T

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Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 14071322 - 14071244
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||||||||| |||||||  |||||||||||||||| |||||||| ||  || |||||||||||    
T  14071322 cttaatacatcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtc 14071244  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 21246578 - 21246516
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||||||||||||| ||||    
T  21246578 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaattcggtc 21246516  T

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Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 43808624 - 43808562
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| | ||||||| ||||||||||||||||||||||||||    
T  43808624 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtc 43808562  T

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Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 34531676 - 34531744
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||||||||||||||| | ||||| |||||||| |||||||| ||| || |||||||||||| ||||    
T  34531676 gtcccttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatttggtctcttat 34531744  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 34653435 - 34653491
Alignment:
Q  225 aatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||| ||||||| |||||||||||||||||| ||||||| ||||||||| |||||||    
T  34653435 aatacatcatttggtcccttaacttattttcggttttcactttggtcccttaactat 34653491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 44977218 - 44977277
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| || |||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  44977218 cttaatacattatttggtcccttaacttatttttggttttcactttggtcccctaactat 44977277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 2236826 - 2236888
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  2236826 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 2236888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 9822665 - 9822726
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||| || || ||| ||||||| | ||||||||||||||||||||||||||    
T  9822665 gtcccttaacttattt-caattgtcagtttggtcacttaactattaaacgtttcaatttggtc 9822726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 30743100 - 30743162
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||| |||||||||||| | || ||||| ||||||| ||||||||||| ||||||||||||||    
T  30743100 gtcctttaacttattttaatttctcaatgtggtcccttaactattaaatgtttcaatttggtc 30743162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 35683068 - 35683130
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  35683068 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 35683130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 48934250 - 48934316
Alignment:
Q  234 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||| ||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  48934250 tttaatcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48934316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 48935213 - 48935151
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  48935213 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48935151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 49139799 - 49139877
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    |||||| ||||||| |||||||||||||||||  ||||||  ||||||||| ||||||| ||  || ||||||||||||    
T  49139799 ttaatacatcatttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtct 49139877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 13641271 - 13641332
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  13641271 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtc 13641332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 40778666 - 40778711
Alignment:
Q  505 atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    ||| ||||||||||| |||||| |||||||||||||||||||||||    
T  40778666 atcatttcaacttcagcaaaaaccacaaaatcaaacatttaaattt 40778711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 47136806 - 47136729
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    ||||||| |||||||  ||| ||||||||||||  |||||||||| |||||||||||||| ||  || ||||||||||    
T  47136806 cttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggt 47136729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 48467648 - 48467595
Alignment:
Q  224 taatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaa 277  Q
    ||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||||    
T  48467648 taatacatcgtttggtcccttaacttattttctattttcaatttggtcccctaa 48467595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 401 - 469
Target Start/End: Complemental strand, 51694440 - 51694372
Alignment:
Q  401 tgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcatacaaccttcatca 469  Q
    ||||||||||||| |||||| |||||| | |||||||||||| || |||||||||||||||| |||||||    
T  51694440 tgtatcaccaacacctaatttattttattcttcttcatcttcatc-ttcatcttcatacaacattcatca 51694372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 21276991 - 21277050
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| || |||| |||||||||||||||||  ||||||||||||||  |||||||||    
T  21276991 cttaatacattatttggtcccttaacttatttttggttttcaatttggttgcctaactat 21277050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 33793776 - 33793831
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaa 277  Q
    ||||||| |||||||  ||||||||||||||||  ||||||| |||||||||||||    
T  33793776 cttaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaa 33793831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 40721921 - 40722016
Alignment:
Q  362 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||||||||||||||| ||| || || | || ||||  ||||||| ||||| |||||| ||| || ||||||||||||||||||  |||||||||    
T  40721921 ggagatcgttggataaaggaggtccattagatttaacggtgtatcatcaacacctaatttattctacttttcttcatcttcttcccacatcttcat 40722016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 44979432 - 44979491
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| |||||||| ||||||||||||||||  ||||||| ||||||| | |||||||    
T  44979432 cttaatacatcatttaatcccttaacttattttttgttttcactttggtctcttaactat 44979491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 47410981 - 47411060
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| || |||| ||||||||| |||||||   ||||||||||| |||||||||||| ||  || ||||||||||||    
T  47410981 cttaatacataatttggtcccttaaattatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtct 47411060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 52181424 - 52181365
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||||||| |||| |||| ||||||||||||   ||||||||||||||| ||||||||    
T  52181424 cttaatagataatttggtcctttaacttattttttattttcaatttggtcctctaactat 52181365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 52741485 - 52741544
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  ||||| | |||||||| ||||||||    
T  52741485 cttaatatatcatttggtcccttaacttatttttcgtttttattttggtcctctaactat 52741544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 52743095 - 52743036
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||| ||||||||   |||||| |||||||||||||||||    
T  52743095 cttaatacatcatttggtcccttagcttatttttcattttcactttggtcccctaactat 52743036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 2238081 - 2238019
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  2238081 gtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtc 2238019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 9119815 - 9119877
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||| |||||||||| |||||||| ||  || |||||||||||    
T  9119815 gtcccttaacttattttcggattttaatttggtcctctaactataaagtgtctcaatttggtc 9119877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 10579715 - 10579653
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  | |||| |||||||||| ||||||||||| |||||  |||||||    
T  10579715 gtcccttaacttattttttggtttcgatttggtcccttaactattaaaagtttcgttttggtc 10579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 26056250 - 26056188
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  | ||||| ||||||||||||||||| ||  || |||||||||||    
T  26056250 gtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtc 26056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 37624689 - 37624611
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||||||||||||| ||| ||    |||||||  ||||||| ||||||  ||||||||||||||||||    
T  37624689 cttaatacatcatttagtcccttaatttaattatttttttcaaaatggtcccttaactaaaaaacgtttcaatttggtc 37624611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 40135444 - 40135382
Alignment:
Q  234 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 296  Q
    ||||||||||||||||||||| || ||||| |||||||| |||||| | ||| || |||||||    
T  40135444 tttagtcccttaacttatttttagatttcattttggtcctctaactttaaaatgtctcaattt 40135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 541
Target Start/End: Original strand, 40187891 - 40187941
Alignment:
Q  491 ttctttcaaaatttatcttttcaacttcaacaaaaagcacaaaatcaaaca 541  Q
    ||||||||||| ||||| |||||||||||||||||| |||| ||| |||||    
T  40187891 ttctttcaaaaattatcatttcaacttcaacaaaaaccacataattaaaca 40187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 442
Target Start/End: Original strand, 49801877 - 49801919
Alignment:
Q  400 atgtatcaccaacatctaattattttaattttcttcatcttct 442  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||    
T  49801877 atgtaccaccaacatctaatttttttcattttcttcatcttct 49801919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 50679924 - 50679862
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| |||||| | ||||||||| ||||||| ||  || |||||||||||    
T  50679924 gtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtc 50679862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 38458099 - 38458140
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaact 279  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  38458099 gtcccttaacttatttttggatttcaatttggtcccctaact 38458140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 9123502 - 9123442
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 298  Q
    |||||||||||||||||| | ||| | ||||||||| ||||||| ||  ||||||||||||    
T  9123502 gtcccttaacttattttcggattttattttggtcccttaactataaagtgtttcaatttgg 9123442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 9633773 - 9633849
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    |||||| || |||| |||| ||||||||||||  ||||||| ||||||||| ||||||| ||  || ||||||||||    
T  9633773 ttaatacataatttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggt 9633849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 469
Target Start/End: Complemental strand, 47533791 - 47533725
Alignment:
Q  401 tgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcatacaaccttcatca 469  Q
    ||||||||||||| ||||||  |||| ||| |||||||||||||| |||||||||| || |||||||||    
T  47533791 tgtatcaccaacacctaatttatttacttt-cttcatcttcttccatcatcttcat-catccttcatca 47533725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 1e-67; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 222 - 476
Target Start/End: Complemental strand, 4974168 - 4973913
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| || | |||||||||||||||| || |||||  ||||||||||||||||| ||    
T  4974168 cttaatagatcatttagtcccttaatttattttcaattttcaatttgatctcttaactattaaacgttttaaattggttctttatcttctttccatcgtt 4974069  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aatt 420  Q
    ||||||||||||||||||| ||||||||| | |       ||||| ||||||||| ||||||||||||| |||||||| ||||||||| |||  | | ||    
T  4974068 caatttggtccaattttattcattttaacccccaagaaaaggagaccgttggatagatgagatctatcagatctaactgtgtatcaccgacacatgattt 4973969  T
Q  421 attttaattttcttcatcttcttccttcatcttcatacaaccttcatcaatcttca 476  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||    
T  4973968 attttacttttcttcatcttctttcctcatcttcatacaaccttcatcaatcttca 4973913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 222 - 469
Target Start/End: Complemental strand, 22794440 - 22794195
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| ||| || ||||||||| ||||||| ||    
T  22794440 cttaatacatcgtttggtcccttaacttattt-ctgttttcaatttggtcccctaactattaaacgttccaaattgttcctttatcttccttccatcctt 22794342  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatta 421  Q
    ||||||||||| ||||||| ||||||||| | |       ||||||||||||||||||||| ||||||| |||||| | |||||||||||||||| |||     
T  22794341 caatttggtcctattttattcattttaacccccaaaaaaaggagatcgttggataaatgaggtctatcagatctaattgtgtatcaccaacatctgattt 22794242  T
Q  422 ttttaattttcttcatcttcttccttcatcttcatacaaccttcatca 469  Q
     |||  |||||||||||||||||| |||||||||| ||| ||||||||    
T  22794241 attttcttttcttcatcttcttccctcatcttcat-caatcttcatca 22794195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 238 - 476
Target Start/End: Original strand, 29657002 - 29657248
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattt 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||| |||||| ||| |||||||||||||||| ||| ||||    
T  29657002 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgttcaaaattggtcctttatcatctctccatcattcaatttgatcctattt 29657101  T
Q  338 tatccattttaacactc-nnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaattttcttc 435  Q
    |||  |||||||| | |         |||| |||||||||||||||| |||||| |||||||| ||||||||||||| || |||||||||| ||||||||    
T  29657102 tattaattttaacccccaaaaacaacgagaccgttggataaatgagaactatcagatctaactgtgtatcaccaacacctgaattattttacttttcttc 29657201  T
Q  436 atcttcttc------cttcatcttcatacaaccttcatcaatcttca 476  Q
    |||||||||      |||||| |||||||||||||||||||||||||    
T  29657202 atcttcttctctcatcttcatattcatacaaccttcatcaatcttca 29657248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 222 - 414
Target Start/End: Original strand, 4973510 - 4973702
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||  || |||||  |||||||||||| |||| ||    
T  4973510 cttaatacattatttagtcccttaacttattttcagttttcaatttggtcctttaactattaaacgttctaaattggttctttatcttcttttcatcgtt 4973609  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacat 414  Q
    ||||||||||| ||||||| ||||| ||| |||        |||| ||||||||| ||||| ||||||| |||||||| ||||||||||||||    
T  4973610 caatttggtcctattttattcatttgaaccctcaagaaaatgagaccgttggatagatgaggtctatcatatctaactgtgtatcaccaacat 4973702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 230 - 416
Target Start/End: Complemental strand, 32894908 - 32894721
Alignment:
Q  230 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttgg 329  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||| |||||||||||| |||| || |||||| ||||||||||| |||||||| |||||||    
T  32894908 atcatttggtcccttaacttattttcaattttcaatttgatcctctaactattaaaagttttaaattggtcatttatcttcttcccatcattaaatttgg 32894809  T
Q  330 tccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatct-aactatgtatcaccaacatct 416  Q
    ||| ||||||| ||||| ||| |||       | ||| ||||||||||||||||||||||| || | || | ||||||||||||||||    
T  32894808 tcctattttattcatttaaaccctcaagaaaagaagaccgttggataaatgagatctatcagatttaaagtgtgtatcaccaacatct 32894721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 222 - 474
Target Start/End: Complemental strand, 29658732 - 29658475
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||||| |||  |||||||||||| |||||||||||| |||| |||||||||||||| || || |||||| |||||||||||| |||||||    
T  29658732 cttaatacatcatttggtcatttaacttatttttagttttcaatttagtcctctaactattaaacggtttaaattggtcctttatcttcttttcatcatt 29658633  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatta 421  Q
    | ||||| ||| ||||||| ||||||||| | |       ||||| | |||||||||| || ||||||| |||||| | |||| |||||||  || |||     
T  29658632 ctatttgatcctattttattcattttaac-ccccaaaaaaggagaccattggataaataaggtctatcagatctaattgtgtaccaccaacgcctgattt 29658534  T
Q  422 ttttaattttcttcatcttctt------ccttcatcttcatacaaccttcatcaatctt 474  Q
     ||| | |||||||||||||||       |||||||||||||||||||||| |||||||    
T  29658533 attttactttcttcatcttctttcctcgtcttcatcttcatacaaccttcaccaatctt 29658475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 413
Target Start/End: Original strand, 32893470 - 32893645
Alignment:
Q  239 tcccttaacttatttt-cagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattt 337  Q
    |||||||||||||||| ||||||| ||||||||| | |||||| ||||||||  || ||| || ||||||||||||||||||||||||||||||  ||||    
T  32893470 tcccttaacttatttttcagtttttaatttggtctcttaactagtaaacgttctaaattgatcctttatcttctttccatcattcaatttggtcttattt 32893569  T
Q  338 tatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca 413  Q
    ||| ||||||||| | |       ||||| |||||||||| || | ||||||| |||||||| |||||||||||||    
T  32893570 tattcattttaacccccaagaaaaggagaccgttggataagtgtggtctatcagatctaactgtgtatcaccaaca 32893645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 370 - 468
Target Start/End: Complemental strand, 46203625 - 46203526
Alignment:
Q  370 ttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatta-ttttaattttcttcatcttcttccttcatcttcatacaaccttcatc 468  Q
    ||||||||| ||||||||| |||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||||    
T  46203625 ttggataaaagagatctataaaatctaacggtgtatcaccaacatctaattaattttaattttattcatcttcttccttcatcttcatctaaccttcatc 46203526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 22061914 - 22061836
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||| |||||||||||    
T  22061914 cttaatacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtc 22061836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 43006382 - 43006460
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||||||  || |||||||||||    
T  43006382 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtc 43006460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 43930316 - 43930394
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||   |||||| |||||||||||||||||||||||| |||||||||||    
T  43930316 cttaatatatcatttggtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtc 43930394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 4858463 - 4858385
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||||||||||||||||| |||||||| |||| |||||||||||| ||| || |||||||||||    
T  4858463 cttaatacatcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtc 4858385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 25153655 - 25153733
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||  || |||||||||||    
T  25153655 cttaatacatcatttggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtc 25153733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 40926638 - 40926560
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  40926638 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtc 40926560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 362 - 476
Target Start/End: Complemental strand, 29409217 - 29409098
Alignment:
Q  362 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttc-----cttcatcttcat 456  Q
    ||||| ||||||||||||||||||||||| |||||||  ||||| ||||||| ||||||  |||| | || ||||||||||||     ||||||||||||    
T  29409217 ggagaccgttggataaatgagatctatcagatctaacagtgtataaccaacacctaatttatttactattattcatcttcttcctcatcttcatcttcat 29409118  T
Q  457 acaaccttcatcaatcttca 476  Q
    | |||  |||||||||||||    
T  29409117 aaaactatcatcaatcttca 29409098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 369 - 476
Target Start/End: Original strand, 36395957 - 36396071
Alignment:
Q  369 gttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttc------cttcatcttcatacaac 461  Q
    |||||||||| |||||| |||| || ||||  |||||||||||||||||| ||||| || |||||||||||||||||      |||||||| ||||||||    
T  36395957 gttggataaaggagatccatcagatttaacagtgtatcaccaacatctaatttattatacttttcttcatcttcttcccacatcttcatctacatacaac 36396056  T
Q  462 cttcatcaatcttca 476  Q
     ||||||||||||||    
T  36396057 attcatcaatcttca 36396071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 22744743 - 22744821
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||   |||||||||| ||||||||||||| ||  ||||||||||||||    
T  22744743 cttaatacatcatttggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtc 22744821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 7146799 - 7146855
Alignment:
Q  244 taacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||| ||||||||||||||||||||||||| ||  ||||||||||||||    
T  7146799 taacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtc 7146855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 23153706 - 23153662
Alignment:
Q  265 tttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  23153706 tttggtcccctaactattaaacgtttcaatttggtcatttatctt 23153662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 47535692 - 47535783
Alignment:
Q  258 ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaattttatccattttaa 349  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||| || |||  |||| |||||||||||| |||||||  |||||||    
T  47535692 ttttcaaattagtcccctaactattaaacgtttcaatttggtcctttatctttgtttttatca-tcaatttggtcctattttattaattttaa 47535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 309
Target Start/End: Original strand, 16955689 - 16955776
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    |||||| |||||| | ||||||||||||| ||    ||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||    
T  16955689 cttaattgatcatctggtcccttaacttaattctttttttcaaattggttccctagctattaaacgtttcaatttggtcatttatctt 16955776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 17287083 - 17287149
Alignment:
Q  234 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 300  Q
    ||||||||||||||||||| | || ||||||||||||||||||||| |||||| ||||||||||||||    
T  17287083 tttagtcccttaacttattattagatttcaatttggtcccctaact-ttaaactgtttcaatttggtc 17287149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 309
Target Start/End: Complemental strand, 43704571 - 43704484
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    |||||| |||||||| ||||||||||||| ||    ||||| | ||||||||||||||||||||||||||||  ||||| ||||||||    
T  43704571 cttaattgatcatttggtcccttaacttaattatttttttcgaattggtcccctaactattaaacgtttcaaaatggtcctttatctt 43704484  T

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Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 445
Target Start/End: Complemental strand, 47536969 - 47536747
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttc-tttccatcat 320  Q
    ||||||| ||| ||| ||||||||||||| ||    ||||| | |||||||||||||||||||||  || || |||||| ||||||||  |||  |||||    
T  47536969 cttaatacatcgtttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacactttaaattggtcctttatctttgtttttatcat 47536870  T
Q  321 tcaatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt 420  Q
     ||||||||||| |||||||  |||||||   ||       | ||| ||||||||||| ||| ||||||| ||||||   ||||||||||||| ||||||    
T  47536869 -caatttggtcctattttattgattttaaacttctcaaaaagaagaccgttggataaaagaggtctatcagatctaatggtgtatcaccaacacctaatt 47536771  T
Q  421 attttaattttcttcatcttcttcc 445  Q
    || || | |||||||||||||||||    
T  47536770 atatt-actttcttcatcttcttcc 47536747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 7148161 - 7148099
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| |||||||||||||||  |||||||| ||  ||||||||||||||    
T  7148161 gtcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtc 7148099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 19279731 - 19279653
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||| ||| |||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  19279731 cttaatacatcgtttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtc 19279653  T

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Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 33459662 - 33459584
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||||||||| |||||||||||  ||||||| |||||||| |||||||| ||  || |||||||||||    
T  33459662 cttaatacatcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtc 33459584  T

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Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 41126252 - 41126314
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||  || |||||||||||    
T  41126252 gtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtc 41126314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 44114774 - 44114720
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtccccta 276  Q
    ||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  44114774 cttaatacatcatttggtcccttaacttatttttagttttcattttggtccccta 44114720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 47537143 - 47537081
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||| ||||||||||||||    
T  47537143 gtcccttaacttattttaacttctcagtttggtcccttaactattaaatgtttcaatttggtc 47537081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 4857200 - 4857276
Alignment:
Q  224 taatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||| |||||||  ||||||||||||||||  ||||||| ||||||||||||||||| ||| || || ||||||||    
T  4857200 taatacatcatttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtc 4857276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 550
Target Start/End: Complemental strand, 4973889 - 4973829
Alignment:
Q  491 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    ||||||||||| || ||| ||||||||| |||||||| |||||||||||||||||||||||    
T  4973889 ttctttcaaaaattcatcatttcaacttgaacaaaaaccacaaaatcaaacatttaaattt 4973829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 469
Target Start/End: Complemental strand, 19218960 - 19218853
Alignment:
Q  362 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcatacaa 460  Q
    ||||| ||||||||||| ||| || || | || ||||  ||||||||||||| |||||| |||||| | |||||||||||| || |||||||||||||||    
T  19218960 ggagaccgttggataaaagaggtccatgagatttaacagtgtatcaccaacacctaatttattttattcttcttcatcttcatc-ttcatcttcatacaa 19218862  T
Q  461 ccttcatca 469  Q
    | |||||||    
T  19218861 cattcatca 19218853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 18802508 - 18802449
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||| ||||||||||||    
T  18802508 cttaatacatcatttggtcccttaacttattttttgttttcattttgatcccctaactat 18802449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 309
Target Start/End: Complemental strand, 36585024 - 36584937
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    |||||| |||||||| ||||||||||||| ||    ||||| | ||||||||||||||||||||| ||||||  ||||| ||||||||    
T  36585024 cttaattgatcatttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacatttcaaaatggtcctttatctt 36584937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 476
Target Start/End: Original strand, 45398665 - 45398783
Alignment:
Q  362 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttcct-----tcatcttcat 456  Q
    ||||||| ||||||||  ||| | |||||||||| |   ||||||||||||||||||||  |||| ||| |||||||||||||||     ||||||||||    
T  45398665 ggagatcattggataagggaggtttatcaaatcttatagtgtatcaccaacatctaatttatttacttt-cttcatcttcttcctcatcttcatcttcat 45398763  T
Q  457 acaaccttcatcaatcttca 476  Q
      ||||||||||||||||||    
T  45398764 ttaaccttcatcaatcttca 45398783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 25155054 - 25154996
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||| ||||||| |||||||||||||||||  |||||||||||| |||| |||||||    
T  25155054 ttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccttaactat 25154996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 30224079 - 30224017
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  30224079 gtcccttaacttattttcggatttcattttggtcccctaactataaattgtctcaatttggtc 30224017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 303
Target Start/End: Original strand, 33070645 - 33070683
Alignment:
Q  265 tttggtcccctaactattaaacgtttcaatttggtcttt 303  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  33070645 tttggtcccttaactattaaacgtttcaatttggtcttt 33070683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 35128281 - 35128231
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcc 272  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||    
T  35128281 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcc 35128231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 36673939 - 36673877
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||| | ||||||||||||||||| ||| || |||||||||||    
T  36673939 gtcccttaacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtc 36673877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 40881104 - 40881166
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| | ||||||| |||||||||| |||||||||||||||    
T  40881104 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtc 40881166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 41616637 - 41616699
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  41616637 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 41616699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 43931985 - 43931907
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| || |||||| |||||||   |||||| | |||||| ||||||||||||||| |||||||||||    
T  43931985 cttaatacatcatttggttccttaatttattttttattttcactctggtcctctaactattaaacgtatcaatttggtc 43931907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 45721866 - 45721808
Alignment:
Q  241 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||  || ||||||||||    
T  45721866 ccttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatttggt 45721808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 14206687 - 14206748
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||| |||||||  ||||||| ||||||| ||||||||| ||| ||||||||||||||    
T  14206687 tcccttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtc 14206748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 14215377 - 14215438
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||| |||||||  ||||||| ||||||| ||||||||| ||| ||||||||||||||    
T  14215377 tcccttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtc 14215438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 22060460 - 22060537
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    ||||||| ||||||| ||| |||||||||||||  ||||| |||||||||| |||||||| ||  || ||||||||||    
T  22060460 cttaatatatcatttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggt 22060537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 300
Target Start/End: Complemental strand, 22746438 - 22746361
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||| || |||| |||| ||||||||||||  ||||||||||| ||||||||||||| ||  || |||||||||||    
T  22746438 ttaatacattatttggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtc 22746361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 23350926 - 23350995
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||  |||||||    
T  23350926 tcatttagtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcgttttggtc 23350995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 550
Target Start/End: Complemental strand, 22794169 - 22794117
Alignment:
Q  498 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    |||||| ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  22794169 aaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 22794117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 29657270 - 29657330
Alignment:
Q  491 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    ||||||||||| || ||| |||||||||||||||||  || ||||||||||||||||||||    
T  29657270 ttctttcaaaaattcatcatttcaacttcaacaaaatccaaaaaatcaaacatttaaattt 29657330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 14109180 - 14109129
Alignment:
Q  230 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||||||||||||| | |||||| ||||||||| |||||||    
T  14109180 atcatttggtcccttaacttatttttaattttcactttggtcccttaactat 14109129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 14419137 - 14419086
Alignment:
Q  230 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||||||||||||| | |||||| ||||||||| |||||||    
T  14419137 atcatttggtcccttaacttatttttaattttcactttggtcccttaactat 14419086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 34558404 - 34558361
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||||||||||||||| | ||||| |||||||||||||||||    
T  34558404 gtcccttaacttattttcggatttcattttggtcccctaactat 34558361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 38002613 - 38002546
Alignment:
Q  242 cttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    |||||||||||||||| ||||| ||||||||| ||||||| ||  || |||||||||||  |||||||    
T  38002613 cttaacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtcccttatctt 38002546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 41127273 - 41127206
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    ||||||||||||||||| | ||||| ||||||||||||||||| ||   | ||||||||||| |||||    
T  41127273 tcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtcctttat 41127206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 46196897 - 46196940
Alignment:
Q  266 ttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||    
T  46196897 ttggtcccctaactattaaatgttttaatttggtcgtttatctt 46196940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 46203725 - 46203686
Alignment:
Q  270 tcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  46203725 tcccctaactattaaacgttttaatttagtcttttatctt 46203686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 46675053 - 46674994
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| |||||||  ||||||||||||||||  |||||||||||| |||| |||||||    
T  46675053 cttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccttaactat 46674994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 2904150 - 2904092
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 296  Q
    ||||||||| |||||||||  ||||| ||||||||||||||||| ||| || |||||||    
T  2904150 gtcccttaatttattttcaaatttcattttggtcccctaactataaaatgtctcaattt 2904092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 17288323 - 17288261
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  ||||| | ||||||||||||||||| ||  || |||||||||||    
T  17288323 gtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtc 17288261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 19069992 - 19069930
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  | ||||| ||||||||| |||||||| || |||||| |||||||    
T  19069992 gtcccttaacttattttttggtttcattttggtcccttaactattgaaagtttcattttggtc 19069930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 19278350 - 19278428
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||| ||| ||| ||  || |||||||||||    
T  19278350 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtc 19278428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 21171589 - 21171527
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  | ||||||||||||||||||||| | ||  || |||||||||||    
T  21171589 gtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttggtc 21171527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 29344177 - 29344239
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| ||||  ||| |||||||||||||||| |||||||||    
T  29344177 gtcccttaacttattttaatttctcagtttgaccccttaactattaaacgttttaatttggtc 29344239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 38001517 - 38001579
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||||   ||||| |||||||| |||||||| ||  ||||||||||||||    
T  38001517 gtcccttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtc 38001579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 40930415 - 40930493
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||| |||  |||||| | |||||||  ||||||| ||||||||||||||||| ||  ||||||||||||||    
T  40930415 cttaatacatcgtttgatcccttgatttatttttggttttcactttggtcccctaactataaagtgtttcaatttggtc 40930493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 41516462 - 41516404
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||| ||||||| ||| |||||||||||||  ||||| | |||||||||||||||||    
T  41516462 ttaatatatcatttggtctcttaacttattttttgttttaattttggtcccctaactat 41516404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 43007768 - 43007690
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||| | ||||||||||   ||||||||||||||| |||||||| ||  || |||||||||||    
T  43007768 cttaatatatcatttggtccttcaacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtc 43007690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 46457067 - 46457145
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||| ||| || ||||||||||||||  |||||||||||| |||| ||||||| ||  || |||||||||||    
T  46457067 cttaatacatcgtttggttccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtc 46457145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 32893724 - 32893769
Alignment:
Q  505 atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    ||| |||||||||||||||||| ||||||||| || ||||||||||    
T  32893724 atcatttcaacttcaacaaaaaccacaaaatcgaaaatttaaattt 32893769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 46673512 - 46673565
Alignment:
Q  247 cttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||  |||||||||||||||||||||| || ||  ||||||||||||||    
T  46673512 cttatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtc 46673565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 16957473 - 16957441
Alignment:
Q  274 ctaactattaaacgtttcaatttggtcttttat 306  Q
    ||||||||||||||||||||||||||| |||||    
T  16957473 ctaactattaaacgtttcaatttggtcctttat 16957441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 19105639 - 19105587
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgttt 290  Q
    |||||||||||||||||  | ||||| ||||||||| ||||||||||| ||||    
T  19105639 gtcccttaacttattttttgatttcattttggtcccttaactattaaaagttt 19105587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 29408391 - 29408439
Alignment:
Q  370 ttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa 418  Q
    ||||||||||||| ||||||| |||||||  ||||||||||||| ||||    
T  29408391 ttggataaatgaggtctatcagatctaacggtgtatcaccaacacctaa 29408439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 42520227 - 42520290
Alignment:
Q  229 gatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaa 293  Q
    |||||||| ||||||||||||| |||   ||||| | |||||||||||| |||||||||||||||    
T  42520227 gatcatttggtcccttaacttaattttt-ttttcgaattggtcccctaaatattaaacgtttcaa 42520290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 4e-64; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 223 - 476
Target Start/End: Complemental strand, 14358000 - 14357740
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattc 322  Q
    |||||| || |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||| | |||| |||||||||||||||||||||    
T  14358000 ttaatatattatttggtcctttaacttattttcagtttttaatttggtcccctaactattaaacgctccaaatcggtcatttatcttctttccatcattc 14357901  T
Q  323 aatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aatta 421  Q
    |||||||||| |||||||  |||||||| | |       ||||| ||||||||||||||||||||||| |||||||| ||||||||||||| || |||||    
T  14357900 aatttggtcctattttattaattttaacccccaaaaaaaggagaccgttggataaatgagatctatcatatctaactgtgtatcaccaacacctgaatta 14357801  T
Q  422 ttttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 476  Q
    ||||| |||||||||||||||||      |||||| |||||||||||||||||||||||||    
T  14357800 ttttacttttcttcatcttcttccctcatcttcatattcatacaaccttcatcaatcttca 14357740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 222 - 476
Target Start/End: Complemental strand, 30916237 - 30915976
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||||  ||  ||||||||||||||||||||||||||    
T  30916237 cttaatacatcatttggtcccttaacttattttatgttttcaatttagtcccctaactattaaacgttctaaagtggtcttttatcttctttccatcatt 30916138  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aatt 420  Q
    ||||||||||  |||| || |||||||||   |       ||||| | |||||||||| || ||||||| |||||||| ||||| ||||||| || | ||    
T  30916137 caatttggtcatatttcattcattttaacctccaaaaaaaggagaccattggataaattaggtctatcagatctaactgtgtattaccaacacctgattt 30916038  T
Q  421 attttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 476  Q
    |||||| |||||||||||||||||      |||||||||||||| |||||||||||||||||    
T  30916037 attttacttttcttcatcttcttccctcatcttcatcttcatactaccttcatcaatcttca 30915976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 223 - 456
Target Start/End: Complemental strand, 33362685 - 33362451
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattc 322  Q
    |||||| ||||||| |||||||||||||||||  ||||| |||||||||| ||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  33362685 ttaatatatcatttggtcccttaacttattttttgtttttaatttggtcctctaactattaaac-tttcaaattggtcctttatcttctttccatcattc 33362587  T
Q  323 aatttggtccaattttatccattttaacactc--nnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatc-taat 419  Q
    |||||||||| |||| || ||||||||| |||         ||||| | ||||||||||||| ||||||| |||||||| ||||||||||| | | || |    
T  33362586 aatttggtcctatttcattcattttaac-ctcaaaaaaaaaggagaccattggataaatgaggtctatcagatctaactgtgtatcaccaataccttatt 33362488  T
Q  420 tattttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  33362487 tattttacttttcttcatcttcttccctcatcttcat 33362451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 241 - 456
Target Start/End: Original strand, 14356448 - 14356662
Alignment:
Q  241 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttat 340  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||  || |||||| ||||||||||||||||||||||||||| ||| |||||||    
T  14356448 ccttaacttattttcagttttcaatttggtcctctaactattaaatgttctaaattggtcgtttatcttctttccatcattcaatttgatcctattttat 14356547  T
Q  341 ccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatctt 440  Q
     ||||||||| |          |||| | |||||| |||||| ||||||| |||||| | ||||||||||||| || |||  ||| | ||||||||||||    
T  14356548 tcattttaactc-aaaaaaaaagagaccattggatgaatgaggtctatcacatctaattgtgtatcaccaacacctgatttattttactttcttcatctt 14356646  T
Q  441 cttccttcatcttcat 456  Q
    ||| | ||||||||||    
T  14356647 ctttcctcatcttcat 14356662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 337
Target Start/End: Original strand, 30912311 - 30912426
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||||| || ||||||||||||||| ||||||||||| |||| |||||||||||||||| |||  | ||| |||||||||||| |||||||    
T  30912311 cttaatacatcatttggttccttaacttattttctgttttcaatttagtcctctaactattaaacgttccaaagtagtcctttatcttctttacatcatt 30912410  T
Q  322 caatttggtccaattt 337  Q
    ||||||||||| ||||    
T  30912411 caatttggtcctattt 30912426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 222 - 445
Target Start/End: Original strand, 42962020 - 42962242
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcat 320  Q
    ||||||| ||| ||| ||||||||||||| ||    ||||| | |||||||||||||||||||||| || || |||||| |||||| || ||| |||||     
T  42962020 cttaatacatcgttttgtcccttaacttaattctttttttcgaattggtcccctaactattaaacgctttaaattggtcctttatctttgttttcatca- 42962118  T
Q  321 tcaatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt 420  Q
    |||||||||||| |||||||  |||||||  |||       | ||| ||||||||||| ||| ||||| | ||||||   ||||||||||||| ||||||    
T  42962119 tcaatttggtcctattttattaattttaaacctctcaaaaagaagaccgttggataaaggaggtctataagatctaatggtgtatcaccaacacctaatt 42962218  T
Q  421 attttaattttcttcatcttcttcc 445  Q
    || || | |||||||||||||||||    
T  42962219 atatt-actttcttcatcttcttcc 42962242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 12936221 - 12936143
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  12936221 cttaatacatcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtc 12936143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 9038502 - 9038573
Alignment:
Q  266 ttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattt 337  Q
    |||||||| ||| |||||||| ||||||||| |||||||||||| ||||||| |||||||||||||| ||||    
T  9038502 ttggtcccttaattattaaacatttcaatttagtcttttatcttgtttccataattcaatttggtcctattt 9038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 19523980 - 19524059
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||| ||||||| ||  || ||||||||||||    
T  19523980 cttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtct 19524059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 19525407 - 19525348
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  19525407 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 19525348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 12950379 - 12950301
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||||||||||||||||||||   ||||||| ||||||||||||||||| ||  || |||||||||||    
T  12950379 cttaatacatcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtc 12950301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 39134680 - 39134741
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    ||||||||||||||||| | || ||| ||||||||| |||||||||||||||||||||||||    
T  39134680 gtcccttaacttattttaaattctcagtttggtcccttaactattaaacgtttcaatttggt 39134741  T

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Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 19825871 - 19825955
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||  |||||| ||||  ||||| |||||    
T  19825871 cttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactaaaaaacgtctcaaactggtcctttat 19825955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 12933748 - 12933807
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| |||||||||||||||||||||||||  ||||||| |||| ||||||||||||    
T  12933748 cttaatatatcatttagtcccttaacttatttttggttttcattttgatcccctaactat 12933807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 27894142 - 27894063
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| ||| ||| ||| |||||||||||||  ||||||| ||||||||||||||||| ||  |||||||||||||||    
T  27894142 cttaatacatcgtttggtcgcttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtct 27894063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 41905172 - 41905231
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  41905172 cttaatacatcatttggtcccttaacttatttttggttttcattttggtcccctaactat 41905231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 42963298 - 42963247
Alignment:
Q  258 ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  42963298 ttttcaaattggtcctctaactattaaacgtttcaatttggtcatttatctt 42963247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 224708 - 224630
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    |||||| ||||| | |||||||||||||||||  ||||||| ||||||||||||||||| ||  || ||||||||||||    
T  224708 ttaatacatcatctggtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtct 224630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 8762519 - 8762441
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||| ||| ||||||||||||||||| | |||||||||||||||| | ||||| ||| || |||||||||||    
T  8762519 cttaatatatcgtttggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtc 8762441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 11907264 - 11907202
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||| ||||||||||||||    
T  11907264 gtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtc 11907202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 18677973 - 18678051
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||| |||||||||||| ||  || |||||||||||    
T  18677973 cttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtc 18678051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 19827259 - 19827181
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||||||| |||||||||||||  ||||||||||||||||| ||| ||| ||  || |||||||||||    
T  19827259 cttaatacatcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtc 19827181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 550
Target Start/End: Complemental strand, 14357712 - 14357660
Alignment:
Q  498 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    |||||| ||| |||||||||||||||||  |||||||||||||||||||||||    
T  14357712 aaaattcatcatttcaacttcaacaaaattcacaaaatcaaacatttaaattt 14357660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 30915642 - 30915714
Alignment:
Q  370 ttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaattttcttcatcttc 441  Q
    ||||||| ||||| ||||||| |||||||| ||||||||||||| || | |||||||| ||||||||||||||    
T  30915642 ttggatatatgaggtctatcagatctaactgtgtatcaccaacacctgatttattttacttttcttcatcttc 30915714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 328273 - 328214
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| |||||||  || |||||||||||||  |||||||||||||||||||||||||    
T  328273 cttaatacatcatttgatcacttaacttattttttgttttcaatttggtcccctaactat 328214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 6629728 - 6629787
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| ||||||||||||||||   ||||||| |||||||||||||||||    
T  6629728 cttaatacatcatttggtcccttaacttatttgtggttttcactttggtcccctaactat 6629787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 12947909 - 12947968
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| |||||||||||||||||||||||||   |||||| |||| ||||||||||||    
T  12947909 cttaatatatcatttagtcccttaacttatttttgattttcattttgatcccctaactat 12947968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 1273086 - 1273164
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||||||||| |||||||  ||||||| ||||||||  ||||||| ||| || |||||||||||    
T  1273086 cttaatacatcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtc 1273164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 4568077 - 4568015
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  4568077 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 4568015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 5382939 - 5383017
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  |||||| |||||||| ||||| ||| ||  || |||||||||||    
T  5382939 cttaatacatcatttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtc 5383017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 23679160 - 23679218
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 296  Q
    |||||| || ||||||| | |||||| ||||||||| ||||||||||||||||||||||    
T  23679160 gtccctaaatttattttaatttttcagtttggtcccttaactattaaacgtttcaattt 23679218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 23855652 - 23855594
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 296  Q
    |||||| || ||||||| | |||||| ||||||||| ||||||||||||||||||||||    
T  23855652 gtccctaaatttattttaatttttcagtttggtcccttaactattaaacgtttcaattt 23855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 476
Target Start/End: Original strand, 30673457 - 30673578
Alignment:
Q  362 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttc------cttcatcttc 454  Q
    ||||| ||||||||||| ||| | | | | || |||| |||||||||||||| |||||| |||| | ||||| |||||||||||      ||||||||||    
T  30673457 ggagaccgttggataaaggaggtttgtgagatttaaccatgtatcaccaacacctaatttatttcacttttcatcatcttcttccctcatcttcatcttc 30673556  T
Q  455 atacaaccttcatcaatcttca 476  Q
    |||||| |||||||||||||||    
T  30673557 atacaagcttcatcaatcttca 30673578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 40059447 - 40059385
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaa 284  Q
    ||||||| || |||| |||||||||||||||||  ||||||| |||| |||||||||||||||    
T  40059447 cttaatatataatttggtcccttaacttatttttggttttcattttgatcccctaactattaa 40059385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 20991751 - 20991690
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | ||||| ||||| ||||||||||| ||| || |||||||||||    
T  20991751 tcccttaacttattttcggatttcattttggccccctaactataaaatgtctcaatttggtc 20991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 550
Target Start/End: Original strand, 30915765 - 30915817
Alignment:
Q  498 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    |||||| ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  30915765 aaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 30915817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 223223 - 223282
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagtttt-caatttggtcccctaactat 281  Q
    |||||| ||| ||| ||||||||||||||||| |||||| || |||||||||||||||||    
T  223223 ttaatatatcgttttgtcccttaacttatttttagttttccactttggtcccctaactat 223282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 19050762 - 19050824
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 300  Q
    |||||||||||||||||  | ||||||||||||||||||||| |||||| || |||||||||||    
T  19050762 gtcccttaacttatttttggatttcaatttggtcccctaact-ttaaactgtctcaatttggtc 19050824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 305
Target Start/End: Complemental strand, 20841894 - 20841827
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctttta 305  Q
    |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||  ||||||| ||||    
T  20841894 gtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtccttta 20841827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 26403304 - 26403363
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||| |||||| ||||||||||||   |||||||||||||||| |||||||    
T  26403304 cttaatacatcatatagtcctttaacttatttttgattttcaatttggtcccttaactat 26403363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 456
Target Start/End: Complemental strand, 30674809 - 30674714
Alignment:
Q  362 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||| ||||| ||||| ||| ||| | | ||||||| |||||||||||||| |||| |||||| | ||| |||| ||||||||| ||||||||||    
T  30674809 ggagaccgttgaataaaggaggtctgtaagatctaaccatgtatcaccaacacctaatttatttcactttccttcctcttcttccctcatcttcat 30674714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 549
Target Start/End: Complemental strand, 33362422 - 33362363
Alignment:
Q  491 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaatt 549  Q
    ||||||||||| || ||| |||||||||||||||||| |||| |||||||| ||||||||    
T  33362422 ttctttcaaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaatt 33362363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 305
Target Start/End: Original strand, 36442238 - 36442305
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctttta 305  Q
    |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||| ||||||| ||||    
T  36442238 gtcccttaacttattttttgctttcgttttggtcccttaactattaaaagtttcattttggtccttta 36442305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 1155982 - 1156044
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||| |||||||    
T  1155982 gtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcattttggtc 1156044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 5384465 - 5384387
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| || |||||| |||||||   ||||||||||| |||||||||||| ||  || |||||||||||    
T  5384465 cttaatacatcatttggttccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtc 5384387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 10570423 - 10570361
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||  |||||||    
T  10570423 gtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtc 10570361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 15509208 - 15509270
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||| | ||||||||||||||||| ||  || |||||||||||    
T  15509208 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtc 15509270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 15510366 - 15510304
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| |||| |||||||||||| ||  || |||||||||||    
T  15510366 gtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtc 15510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 21387650 - 21387712
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||    ||||| ||||||||||||||||| ||| || |||||||||||    
T  21387650 gtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtc 21387712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 24070418 - 24070480
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||| ||||||| | || ||| | || |||| ||||||||||||||||||||||||||    
T  24070418 gtcccttaatttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttggtc 24070480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 39135767 - 39135689
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||| |   |||| |||||||||||| | || ||| |||| |||| ||||||||||| ||||||||||||||    
T  39135767 cttaatagatcctccggtcctttaacttattttaatttctcagtttgctcccttaactattaaatgtttcaatttggtc 39135689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 42382213 - 42382151
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  | |||| |||||||||| ||||||||||| |||||  |||||||    
T  42382213 gtcccttaacttattttttggtttcgatttggtcccttaactattaaaagtttcgttttggtc 42382151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 22650726 - 22650669
Alignment:
Q  243 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  22650726 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 22650669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 24071545 - 24071484
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||| | |||||| ||| || || ||| ||||||| ||||||||||||||    
T  24071545 tcccttaacttattttaatttttcagtttagttccttaattattaaatgtttcaatttggtc 24071484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 641976 - 641921
Alignment:
Q  245 aacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 300  Q
    |||||||||| || ||||||||||||||||||||| |||||| || |||||||||||    
T  641976 aacttatttttagatttcaatttggtcccctaact-ttaaactgtctcaatttggtc 641921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 1273459 - 1273383
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 298  Q
    ||||||| ||| ||| |||||||||||||||||  ||||||| ||||||||| ||| ||| ||  || |||||||||    
T  1273459 cttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatttgg 1273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 1663184 - 1663216
Alignment:
Q  222 cttaatagatcatttagtcccttaacttatttt 254  Q
    ||||||| |||||||||||||||||||||||||    
T  1663184 cttaatacatcatttagtcccttaacttatttt 1663216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 456
Target Start/End: Original strand, 4032002 - 4032058
Alignment:
Q  401 tgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||||||||||| |||||| || || | ||||||| ||||||||||||||||||||    
T  4032002 tgtatcaccaacacctaatttatatttactttcttcttcttcttccttcatcttcat 4032058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 20988703 - 20988771
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||  || ||||||| |||| ||||    
T  20988703 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttagtctcttat 20988771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 222 - 476
Target Start/End: Complemental strand, 11081151 - 11080890
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| |||||||  ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  11081151 cttaatacatcatttgatcccttaacttattttctgttttcaatttggtcctctaactattaaacgttccaaattggtcctttatcttctttccatcatt 11081052  T
Q  322 caatttggtccaattttatccattttaacactc-nnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aat 419  Q
    ||||||||||| |||| || ||||||||| |||        ||||| | ||||||||||||| ||||||| |||||||| ||||||||||||| || | |    
T  11081051 caatttggtcctatttcattcattttaac-ctcaaaaaaaaggagacctttggataaatgaggtctatcagatctaactgtgtatcaccaacacctgatt 11080953  T
Q  420 tattttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 476  Q
    ||||||| |||||||||||||||||      ||||||||||||||||||||||||||||||||    
T  11080952 tattttacttttcttcatcttcttccctcatcttcatcttcatacaaccttcatcaatcttca 11080890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 242 - 441
Target Start/End: Original strand, 42307513 - 42307712
Alignment:
Q  242 cttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatc 341  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||| || ||| |||||||||||||||||||| ||||| | || |||||||     
T  42307513 cttaacttattttctgttttcaatttggtcccctaactattaaatatttcaaattagtcatttatcttctttccatcatttaatttagacctattttatt 42307612  T
Q  342 cattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaattttcttcatctt 440  Q
    ||||||||  | |        |||||| |||||||||| || ||||||| |||||| | |||||||| ||||||| | ||||||||  ||||||||||||    
T  42307613 cattttaatccacaaaaaat-gagatcattggataaataaggtctatcatatctaattgtgtatcactaacatctgatttattttacctttcttcatctt 42307711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 223 - 348
Target Start/End: Complemental strand, 42314934 - 42314809
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattc 322  Q
    |||||| |||||||  | |||||| ||||||||  ||||||||||| | |||||||||||||||||||||| |||||  |||||||||||||| ||||||    
T  42314934 ttaatacatcatttgattccttaatttattttctattttcaatttgattccctaactattaaacgtttcaaattggttctttatcttctttccttcattc 42314835  T
Q  323 aatttggtccaattttatccatttta 348  Q
    |||||||||  ||||||| |||||||    
T  42314834 aatttggtctcattttattcatttta 42314809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 31623903 - 31623981
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  ||||||||||||||    
T  31623903 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtc 31623981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 237 - 300
Target Start/End: Original strand, 16346111 - 16346174
Alignment:
Q  237 agtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | || ||| ||||||||| ||||||||||||||||||||||||||    
T  16346111 agtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtc 16346174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 36756061 - 36756139
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||||||||||||||||| |||||| ||||||||||| ||||||| ||  |||||||| |||||    
T  36756061 cttaatacatcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtc 36756139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 37324798 - 37324728
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||| || ||||||||||||    
T  37324798 tcatttaatcccttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtct 37324728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 38591126 - 38591048
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||   |||||||||||||||||||||||| ||  || |||||||||||    
T  38591126 cttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtc 38591048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 41868035 - 41867957
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||||||||| ||||||| |||||||| ||||||||||||||||| ||  || |||||||||||    
T  41868035 cttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtc 41867957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 43386821 - 43386743
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||| | |||||||||||||||||  ||||||| ||||||||||||||||| ||| || |||||||||||    
T  43386821 cttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtc 43386743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 36940152 - 36940075
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||| |||||||||||| ||  |||||||||||||    
T  36940152 cttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggt 36940075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 362 - 441
Target Start/End: Complemental strand, 35462968 - 35462888
Alignment:
Q  362 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttc 441  Q
    ||||||||||||||||||||| ||||||  |||||||  ||||||||||||| |||| |||||||| |||| |||||||||    
T  35462968 ggagatcgttggataaatgaggtctatctgatctaacagtgtatcaccaacacctaatttattttacttttattcatcttc 35462888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 38790372 - 38790296
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 298  Q
    ||||||| |||| ||  |||||||||||||||||  |||||| |||||| ||||||||||||||||| |||||||||    
T  38790372 cttaatacatcagttgatcccttaacttattttcgtttttcattttggttccctaactattaaacgtctcaatttgg 38790296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 39310 - 39244
Alignment:
Q  234 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 300  Q
    ||||||||||||||||||| | || ||||||||||||||||||||| |||||| ||||||||||||||    
T  39310 tttagtcccttaacttattattagatttcaatttggtcccctaact-ttaaactgtttcaatttggtc 39244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 10053863 - 10053804
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||| |||||||    
T  10053863 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactat 10053804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 37323345 - 37323420
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    ||||||| ||||||| ||||||||| |||||||  |||||||||||||| |||||||||| ||| || ||||||||    
T  37323345 cttaatacatcatttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttg 37323420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 12818767 - 12818829
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| ||||||||| |||||||||||| |||||||||||||    
T  12818767 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacatttcaatttggtc 12818829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 363 - 456
Target Start/End: Original strand, 20066216 - 20066310
Alignment:
Q  363 gagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 456  Q
    |||| ||||||||||| |||||| |||| || ||||  ||||||||||||| |||| ||||| || ||||||||||||||||||  |||||||||    
T  20066216 gagaccgttggataaaagagatccatcagatttaacagtgtatcaccaacacctaatttattctacttttcttcatcttcttcccacatcttcat 20066310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 43278040 - 43277962
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||  ||||||||||||||||   |||| ||||||||||||||||||| ||| || |||||||||||    
T  43278040 cttaatatatcatttgatcccttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtc 43277962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 494 - 550
Target Start/End: Original strand, 42307759 - 42307815
Alignment:
Q  494 tttcaaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    ||| |||||| ||| |||||||||||||||||| |||| ||||||||||||||||||    
T  42307759 tttaaaaattcatcatttcaacttcaacaaaaaccacataatcaaacatttaaattt 42307815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 463
Target Start/End: Complemental strand, 42314740 - 42314696
Alignment:
Q  419 ttattttaattttcttcatcttcttccttcatcttcatacaacct 463  Q
    |||||||| |||||||||||||||||| |||||||||||||||||    
T  42314740 ttattttacttttcttcatcttcttccctcatcttcatacaacct 42314696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 117045 - 117120
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    ||||||| ||| |||  ||||||||||||||||  ||||||| ||||||||||||| ||| ||| |||||||||||    
T  117045 cttaatacatcgtttgatcccttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttg 117120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 162703 - 162640
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||||||||||||| || ||||  ||||||||| ||||||||||| |||||| ||||||||    
T  162703 gtcccttaacttatttttaggtttcgttttggtcccttaactattaaaagtttcattttggtct 162640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 22914293 - 22914234
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    ||||||||||||||||| | |||||| |||| |||  |||||||||||||||||||||||    
T  22914293 gtcccttaacttattttaatttttcagtttgatccattaactattaaacgtttcaatttg 22914234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 36070175 - 36070234
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| |||||||  |||||||| |||||||  |||||||||||||||||||||||||    
T  36070175 cttaatacatcatttgatcccttaatttatttttggttttcaatttggtcccctaactat 36070234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 36071497 - 36071438
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||||||| |||||||||| ||  ||||||||||||||||| |||||||    
T  36071497 cttaatacatcatttagtctcttaacttatattttgttttcaatttggtcccttaactat 36071438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 38589818 - 38589876
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||||||| ||||||||    
T  38589818 cttaatacatcatttggtcccttaacttatttt-tgttttcaatttggtcctctaactat 38589876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 43275747 - 43275806
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| ||| |||||||||||||  |||||||||||||| ||||||||||    
T  43275747 cttaatacatcatttggtctcttaacttattttttgttttcaatttggttccctaactat 43275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 340
Target Start/End: Original strand, 43414378 - 43414496
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatct-tctttccatcat 320  Q
    |||||| |||||||| ||||||||||||  ||    ||||| | ||||||||||||||||||||||||||||  ||||| ||||||| | ||| |||||     
T  43414378 cttaattgatcatttggtcccttaactttattctttttttcgaattggtcccctaactattaaacgtttcaaaatggtcctttatctatgttttcatca- 43414476  T
Q  321 tcaatttggtccaattttat 340  Q
    |||||||||| | |||||||    
T  43414477 tcaatttggtactattttat 43414496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 309
Target Start/End: Complemental strand, 43416087 - 43416000
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    |||||| ||||| || ||||||||||||| ||    ||||| | |||||||| |||||||||||||||||||  ||||||||||||||    
T  43416087 cttaattgatcaattggtcccttaacttaattctttttttcgaattggtcccttaactattaaacgtttcaaaatggtcttttatctt 43416000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 9189407 - 9189469
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||| ||||||| | || ||| | ||||||| ||||||||||||||||||||||||||    
T  9189407 gtcccttaatttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtc 9189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 24068343 - 24068405
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  24068343 gtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtc 24068405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 29739762 - 29739684
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||| ||||| |||||||  |||||||||||| |||||||||||| ||  || |||||||||||    
T  29739762 cttaatacatcatttggtctcttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtc 29739684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 37472400 - 37472478
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||| ||||||||||||  ||||| |||||||||| |||||||| ||  || |||||||||||    
T  37472400 cttaatacatcatttcgtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtc 37472478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 37474155 - 37474077
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||  |||||||||||||||   ||||||||||||||||| ||||||| ||  || |||||||||||    
T  37474155 cttaatacatcatttcatcccttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatttggtc 37474077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 19913490 - 19913567
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||| ||| ||| |||||||||||||||||    |||||||||||||| |||||||| ||  ||||||||||||||    
T  19913490 ttaatacatcctttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtc 19913567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 491 - 550
Target Start/End: Complemental strand, 11080868 - 11080808
Alignment:
Q  491 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    ||||||||||| || ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  11080868 ttctttcaaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 11080808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 37982 - 38061
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| ||| ||| |||||||||||||||||  ||||| | ||| ||||||||||||| ||  |||| ||||||||||    
T  37982 cttaatacatcgtttggtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtct 38061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 300
Target Start/End: Original strand, 4534046 - 4534109
Alignment:
Q  237 agtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | || ||| ||||||||  ||| ||||||| ||||||||||||||    
T  4534046 agtcccttaacttattttaatttctcagtttggtcctttaaatattaaatgtttcaatttggtc 4534109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 9190542 - 9190483
Alignment:
Q  241 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||| | || ||| ||| ||||| ||||||||||| ||||||||||||||    
T  9190542 ccttaacttattttaatttctcagtttagtcccttaactattaaatgtttcaatttggtc 9190483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 16363931 - 16363872
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| || |||| |||||||||||||||||  ||||||| |||||||| ||||||||    
T  16363931 cttaatatataatttggtcccttaacttatttttggttttcactttggtcctctaactat 16363872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 550
Target Start/End: Original strand, 16497115 - 16497150
Alignment:
Q  515 cttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    |||||||||||| |||||||||||||||||||||||    
T  16497115 cttcaacaaaaaccacaaaatcaaacatttaaattt 16497150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 31625484 - 31625425
Alignment:
Q  241 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||  ||||||||||||||||||||| ||| ||  || |||||||||||    
T  31625484 ccttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtc 31625425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 39325950 - 39325875
Alignment:
Q  225 aatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||| ||| ||| |||||||||||||||||| ||| ||| ||| ||||||||||||  |||||||| || ||||||    
T  39325950 aatatatcgtttggtcccttaacttattttctgttctcattttagtcccctaactaaaaaacgttttaaattggtc 39325875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 39544927 - 39544986
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||| ||||||| | ||||| | |||||||    
T  39544927 cttaatacatcatttggtcccttaacttattttctgttttcactctggtcgcttaactat 39544986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 476
Target Start/End: Original strand, 42307703 - 42307734
Alignment:
Q  445 cttcatcttcatacaaccttcatcaatcttca 476  Q
    ||||||||||||||||||||||||||||||||    
T  42307703 cttcatcttcatacaaccttcatcaatcttca 42307734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 456
Target Start/End: Original strand, 12818892 - 12818986
Alignment:
Q  364 agatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaatt-ttcttcatcttcttccttcatcttcat 456  Q
    ||| ||||||||||| ||| |  |||| |||||||| ||||||||||||| |||| |||||||| || | | |||||||||||||||||| ||||    
T  12818892 agaccgttggataaaggaggttcatcatatctaactctgtatcaccaacacctaatttattttacttatccatcatcttcttccttcatcatcat 12818986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 12820201 - 12820139
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||| |||||||||| | || ||| || |||||| |||||||||||||||| |||||||||    
T  12820201 gtccctaaacttattttaatttctcagttcggtcccttaactattaaacgttttaatttggtc 12820139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 21524697 - 21524635
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||| |||||||    
T  21524697 gtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcattttggtc 21524635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 35945556 - 35945478
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| || |||| |||||||||||||||||  ||||||| ||| ||||| ||||||| ||| || ||| |||||||    
T  35945556 cttaatacattatttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtc 35945478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 39546796 - 39546718
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||| ||| || ||||||||||||||| ||||||| |||||| |||||||| | ||  || |||||||||||    
T  39546796 cttaatacatccttttgttccttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtc 39546718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 41866891 - 41866969
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| | ||||| |||||||||||||||||   |||||| |||| |||| ||||||| ||  ||||||||||||||    
T  41866891 cttaatacaccatttggtcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtc 41866969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 3237759 - 3237702
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaact 279  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||| |||||||||||    
T  3237759 cttaatacatcatttggtcccttaacttatttttggatttcattttagtcccctaact 3237702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 6843769 - 6843830
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | ||| | ||||||||||||||||| ||  || |||||||||||    
T  6843769 tcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtc 6843830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 10398745 - 10398676
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||| |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||| | |||||||    
T  10398745 tcatttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagttttattttggtc 10398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 14820192 - 14820249
Alignment:
Q  224 taatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||| |||| || |||||||||||||||||  | ||| |||||||||||||||||||    
T  14820192 taatacatcaattggtcccttaacttatttttggattttaatttggtcccctaactat 14820249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 20066118 - 20066158
Alignment:
Q  266 ttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||||  ||||| ||||||||||||||||||||||||||    
T  20066118 ttggtcctataacttttaaacgtttcaatttggtcttttat 20066158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 36757306 - 36757270
Alignment:
Q  265 tttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  36757306 tttggtcccctaactataaaacgtctcaatttggtct 36757270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 39323784 - 39323868
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    ||||||| |||||||| |||||||||||||||||  || ||| ||| ||| ||||||||  |||||| |||| ||| ||| ||||    
T  39323784 cttaatatatcatttaatcccttaacttattttctattctcattttagtctcctaactaaaaaacgtctcaaattgatctcttat 39323868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 2e-57; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 222 - 476
Target Start/End: Complemental strand, 14206899 - 14206639
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| || |||| ||||||||| |||||||| ||||| |||||||||| ||||||||||||||||| || |||||| ||||||||||||||||||||    
T  14206899 cttaatacattatttggtcccttaatttattttctgtttttaatttggtcctctaactattaaacgttttaaattggtcatttatcttctttccatcatt 14206800  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-tt 420  Q
    ||||||||||| ||||||| ||||||||||  |        |||| ||||||||||||||| ||||||| |||||||| ||||||||||| |||||| ||    
T  14206799 caatttggtcctattttattcattttaacatccataaaaatgaga-cgttggataaatgaggtctatcagatctaactgtgtatcaccaatatctaattt 14206701  T
Q  421 attttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 476  Q
    |||||| ||||||||||| |||||      |||||| |||||||||||||||||||||||||    
T  14206700 attttacttttcttcatcatcttccatcatcttcatgttcatacaaccttcatcaatcttca 14206639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 222 - 476
Target Start/End: Complemental strand, 14214647 - 14214387
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| || |||| ||||||||| |||||||| ||||| |||||||||| ||||||||||||||||| || |||||| ||||||||||||||||||||    
T  14214647 cttaatacattatttggtcccttaatttattttctgtttttaatttggtcctctaactattaaacgttttaaattggtcatttatcttctttccatcatt 14214548  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-tt 420  Q
    ||||||||||| ||||||| ||||||||||  |        |||| ||||||||||||||| ||||||| |||||||| ||||||||||| |||||| ||    
T  14214547 caatttggtcctattttattcattttaacatccataaaaatgaga-cgttggataaatgaggtctatcagatctaactgtgtatcaccaatatctaattt 14214449  T
Q  421 attttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 476  Q
    |||||| ||||||||||| |||||      |||||| |||||||||||||||||||||||||    
T  14214448 attttacttttcttcatcatcttccatcatcttcatgttcatacaaccttcatcaatcttca 14214387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 222 - 476
Target Start/End: Complemental strand, 48338236 - 48337986
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  || |||||| ||||||||||||||||||||    
T  48338236 cttaatacatcatttggtcccttaacttattttcagttttcaatttggttccctgactattaaacgttctaaattggtcctttatcttctttccatcatt 48338137  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatta 421  Q
    ||||||||||| ||||||| |||||||||   |       ||||| || |||||| ||||| ||||||| |||||||| ||||||||||||| || |||     
T  48338136 caatttggtcctattttattcattttaaccaccaagaaaaggagaccgctggatatatgaggtctatcagatctaactgtgtatcaccaacacctgatt- 48338038  T
Q  422 ttttaattttcttcatcttcttccttcatcttcatacaaccttcatcaatcttca 476  Q
    | || |||||||||  | || | ||||||||||||||||||||||||||||||||    
T  48338037 tattcattttcttc--cctcat-cttcatcttcatacaaccttcatcaatcttca 48337986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 222 - 413
Target Start/End: Original strand, 48336344 - 48336535
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| || ||||||||||||||||||||    
T  48336344 cttaatacatcatttgctcccttaacttattttcagttttcaatttggtcctctaactattaaacgttccaaattgatcatttatcttctttccatcatt 48336443  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca 413  Q
    ||||||||||| ||||||| ||||||||| | |       ||||| ||||||||||||||| | ||| | |||||||| |||||||||||||    
T  48336444 caatttggtcctattttattcattttaacccccaagaaaaggagaccgttggataaatgaggtttattagatctaactgtgtatcaccaaca 48336535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 266 - 456
Target Start/End: Original strand, 8895197 - 8895388
Alignment:
Q  266 ttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacactcnnnnnnnggag 365  Q
    ||||||| ||||||| ||||||||||||||||||| ||| | || ||||| |||||||||||||||| |||| ||  |||||||| | |       ||||    
T  8895197 ttggtccactaactactaaacgtttcaatttggtcatttttattgtttccttcattcaatttggtcctatttcattaattttaaccccctaaaaaaggag 8895296  T
Q  366 atcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcat 456  Q
    ||| | |||||||| || ||||||| |||||||  |||||||||||||  ||||| |||||| ||||||||||||||||| |||||||||||    
T  8895297 atcatcggataaattaggtctatcagatctaaccgtgtatcaccaacacgtaatttattttacttttcttcatcttcttctttcatcttcat 8895388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 238 - 352
Target Start/End: Original strand, 14213145 - 14213259
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattt 337  Q
    ||||||||| |||||||| ||||||||||||||||||||||||| |||||||| || |||||| ||||||||| ||||||||||||||||| | | ||||    
T  14213145 gtcccttaatttattttctgttttcaatttggtcccctaactatcaaacgttttaaattggtcctttatcttccttccatcattcaatttgattctattt 14213244  T
Q  338 tatccattttaacac 352  Q
    |||  ||||||||||    
T  14213245 tatttattttaacac 14213259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 25583111 - 25583189
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||||||||||||||||||||   |||||| |||||||||||||||||||||||| |||||||||||    
T  25583111 cttaatacatcatttagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtc 25583189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 41387552 - 41387474
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||| || |||||||||||    
T  41387552 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtc 41387474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 53809612 - 53809533
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||| ||||    
T  53809612 cttaatacatcatttagtcccttaacttattttttgttttcattttggtcccctaactttaaaacgtctcaattttgtct 53809533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 266 - 350
Target Start/End: Original strand, 50719696 - 50719781
Alignment:
Q  266 ttggtcccctaactattaaac-gtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaac 350  Q
    |||||||  |||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||| | |||||||| ||||||||    
T  50719696 ttggtccattaactattaaaccgtttcaatttggtcctttgtcttgtttccatcattcaatttggttctattttatcaattttaac 50719781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 266 - 350
Target Start/End: Complemental strand, 50793152 - 50793067
Alignment:
Q  266 ttggtcccctaactattaaac-gtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaac 350  Q
    |||||||  |||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||| | |||||||| ||||||||    
T  50793152 ttggtccattaactattaaaccgtttcaatttggtcctttgtcttgtttccatcattcaatttggttctattttatcaattttaac 50793067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 17350221 - 17350143
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||| ||  || |||||||||||    
T  17350221 cttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtc 17350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 19579233 - 19579295
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||| || |||||||||||    
T  19579233 gtcccttaacttattttcagatttcattttggtcccctaactataaaatgtctcaatttggtc 19579295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 8371217 - 8371294
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    ||||||| |||||||  ||||||||||||||||  ||||||| ||||||||||||||||| ||| || ||||||||||    
T  8371217 cttaatacatcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggt 8371294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 41386127 - 41386204
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    ||||||| ||| ||| |||||||||||||||||  ||||||||||||||||||||||||| ||  || ||||||||||    
T  41386127 cttaatacatcgtttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggt 41386204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 45730650 - 45730710
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 298  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||||||||||||||||    
T  45730650 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttgg 45730710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 42632703 - 42632762
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| ||||||||||||| |||  |||||||||||||||||||||||||    
T  42632703 cttaatacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactat 42632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 42634005 - 42633946
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||   ||||||||||||||||||||||||    
T  42634005 cttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactat 42633946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 53808315 - 53808374
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||| ||||| ||||||||| |||||||||    
T  53808315 cttaatacatcatttggtcccttaacttattttcggttttgaatttggtctcctaactat 53808374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 5416211 - 5416273
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||| || |||||||||||    
T  5416211 gtcccttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtc 5416273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 8372735 - 8372657
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||| ||| |||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  8372735 cttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtc 8372657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 10987772 - 10987694
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||  ||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  10987772 cttaatacatcatttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtc 10987694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 26799025 - 26798947
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||| |||||||||||||  ||||| | ||||||||||||||||| ||| || |||||||||||    
T  26799025 cttaatacatcatttggtctcttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtc 26798947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 32980571 - 32980493
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||  ||| ||||||||||||| ||||||||||||||||||||||||  ||  || |||||||||||    
T  32980571 cttaatatatcatttgatccattaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtc 32980493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 51825740 - 51825662
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||| ||||||| ||  ||||||||||||||    
T  51825740 cttaatatatcatttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtc 51825662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 54752613 - 54752691
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||   |||||||||| ||||||||||||| ||  || |||||||||||    
T  54752613 cttaatacatcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtc 54752691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 39133015 - 39133092
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||| |||||||  || |||||||||||||  ||||||||||||||||||||||||| ||  || |||||||||||    
T  39133015 ttaatacatcatttgatctcttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtc 39133092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 52293626 - 52293558
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || ||||||||||| |||||    
T  52293626 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcctttat 52293558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 456
Target Start/End: Complemental strand, 2764065 - 2763970
Alignment:
Q  362 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||| ||||||||||| ||||||| | | ||||||| ||||||||||||||  ||| |||||  | ||| |||||||||||||| ||||||||||    
T  2764065 ggagaccgttggataaaggagatctgtgagatctaaccatgtatcaccaacacttaatttattccactttccttcatcttcttccctcatcttcat 2763970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 21247233 - 21247304
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaa 293  Q
    |||||| |||||||| ||||||||||||| ||     |||||| ||||||||||||||||||||||||||||    
T  21247233 cttaattgatcatttggtcccttaacttaattctttatttcaaattggtcccctaactattaaacgtttcaa 21247304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 25585952 - 25585873
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| || |||| ||||||||| |||||||   |||||| | |||||| ||||||||||||||| ||||||||||||    
T  25585952 cttaatatattatttggtcccttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtct 25585873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 1031829 - 1031891
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| | ||||||| ||||||||||| ||||||||||||||    
T  1031829 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaatgtttcaatttggtc 1031891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 32973152 - 32973214
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  32973152 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 32973214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 32974326 - 32974264
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  32974326 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 32974264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 33000903 - 33000841
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||| ||||||||||| | || ||| |||| |||| ||||||||||||||||||||||||||    
T  33000903 gtcccctaacttattttaatttctcagtttgatcccttaactattaaacgtttcaatttggtc 33000841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 36626728 - 36626806
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||| |||||||||||||  ||| |||||||||  ||||||||| ||  ||||||||||||||    
T  36626728 cttaatatatcatttggtcctttaacttattttctatttacaatttggtttcctaactatgaagtgtttcaatttggtc 36626806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 48035427 - 48035365
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  48035427 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48035365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 50150734 - 50150796
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| ||||||| | ||||||||||| ||||||||||||||    
T  50150734 gtcccttaacttattttaatttctcagtttggtcacttaactattaaatgtttcaatttggtc 50150796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 51401454 - 51401392
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  51401454 gtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtc 51401392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 53047910 - 53047972
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  53047910 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 53047972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 54654085 - 54654007
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  54654085 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtc 54654007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 2225127 - 2225064
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtct 301  Q
    |||||||||||||||||  | ||||||||||||||||||||| |||||| || ||||||||||||    
T  2225127 gtcccttaacttatttttggatttcaatttggtcccctaact-ttaaactgtctcaatttggtct 2225064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 18024576 - 18024636
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 291  Q
    |||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||    
T  18024576 tcatttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 18024636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 30385192 - 30385252
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 291  Q
    |||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||    
T  30385192 tcatttggtcccttaacttattttttggtttcattttggtcccgtaactattaaaagtttc 30385252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 42592411 - 42592471
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 291  Q
    |||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||    
T  42592411 tcatttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 42592471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 456
Target Start/End: Original strand, 50002552 - 50002643
Alignment:
Q  364 agatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||||||||||||| |||||| |||| |||||||  |||||||||||||  |||||  | |  |||||||| ||||||| ||||||||||||    
T  50002552 agatcgttggataaaggagatccatcagatctaacggtgtatcaccaacacataatttatattgttttcttcctcttctt-cttcatcttcat 50002643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 50003342 - 50003258
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||| |||||||| ||||||||||||| ||     |||| | ||||||||||||||||||||||||||||  ||||| |||||    
T  50003342 cttaattgatcatttggtcccttaacttaattctttatttcgaattggtcccctaactattaaacgtttcaaaatggtcctttat 50003258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 5417151 - 5417108
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||||||||||||||| | ||||| |||||||||||||||||    
T  5417151 gtcccttaacttattttcggatttcattttggtcccctaactat 5417108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 11483090 - 11483047
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||    
T  11483090 gtcccttaacttattttcagatttcattttggtcccttaactat 11483047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 39530808 - 39530867
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    ||||||||||||||||| | || ||| | || |||| |||||||||||||||||||||||    
T  39530808 gtcccttaacttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttg 39530867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 47808225 - 47808146
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| |||| ||||||||||||||||||||  | ||||| |||||| || ||||||| ||  || ||||||||||||    
T  47808225 cttaatacatcacttagtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtct 47808146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 49122121 - 49122042
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| ||||||| |||| ||||||||||||  ||||||| ||||||| | ||||||| ||  || ||||||||||||    
T  49122121 cttaatatatcatttggtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtct 49122042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 52292607 - 52292650
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||||||||||||||| | ||||| |||||||||||||||||    
T  52292607 gtcccttaacttattttcggatttcattttggtcccctaactat 52292650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 53342732 - 53342791
Alignment:
Q  241 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  53342732 ccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 53342791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 11219428 - 11219506
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    |||||||||  ||| |||| ||||||||||||  | ||||| ||||||||||||||||| ||  || ||||||||||||    
T  11219428 ttaatagatgctttggtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtct 11219506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 12062487 - 12062425
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||   |||||| ||||||||| ||||||||||  || |||||||||||    
T  12062487 gtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtc 12062425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 17345308 - 17345366
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaacta 280  Q
    ||||||| || |||| |||||||||||||||||  |||||||  |||||||||||||||    
T  17345308 cttaatacattatttggtcccttaacttatttttggttttcaggttggtcccctaacta 17345366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 19579397 - 19579335
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  19579397 gtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtc 19579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 19622003 - 19622061
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||| ||||||| |||| |||| |||||||  ||||||| |||||||||||||||||    
T  19622003 ttaatacatcatttggtcctttaagttatttttggttttcactttggtcccctaactat 19622061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 540
Target Start/End: Original strand, 36627198 - 36627240
Alignment:
Q  498 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaac 540  Q
    |||||||||| |||||||||||||||||| |||| ||||||||    
T  36627198 aaaatttatcatttcaacttcaacaaaaatcacataatcaaac 36627240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 39287483 - 39287545
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| |||||||| |||||||| ||  || |||||||||||    
T  39287483 gtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtc 39287545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 39288538 - 39288480
Alignment:
Q  242 cttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  39288538 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 39288480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 43101899 - 43101969
Alignment:
Q  230 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||||||||||||  ||||||| |||||||| |||| ||| ||  || |||||||||||    
T  43101899 atcatttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtc 43101969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 456
Target Start/End: Original strand, 46688567 - 46688637
Alignment:
Q  387 atcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 456  Q
    |||| |||||||| ||||||||||||| |||| ||||||||  | || |||||||||||||||||| ||||    
T  46688567 atcatatctaactgtgtatcaccaacacctaatttattttacctatcatcatcttcttccttcatcatcat 46688637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 48867533 - 48867471
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||   || ||||||||||||| ||||||||||  || |||||||||||    
T  48867533 gtcccttaacttattttattttctcaatttggtcccttaactattaagtgtgtcaatttggtc 48867471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 53049140 - 53049078
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||| | ||||||||||||||||| ||  || |||||||||||    
T  53049140 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtc 53049078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 541
Target Start/End: Original strand, 54353312 - 54353362
Alignment:
Q  491 ttctttcaaaatttatcttttcaacttcaacaaaaagcacaaaatcaaaca 541  Q
    ||||||||||| ||||| |||||||||||||||||| |||| ||| |||||    
T  54353312 ttctttcaaaaattatcatttcaacttcaacaaaaaccacataattaaaca 54353362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 55442608 - 55442650
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||||||||||||||  ||||| |||||||||||||||||    
T  55442608 tcccttaacttattttcaaatttcattttggtcccctaactat 55442650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 55443653 - 55443591
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||  || |||||||||||    
T  55443653 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 55443591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 17934129 - 17934060
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||||||||||  | |||   ||||||||| ||||||||||| |||||  |||||||    
T  17934129 tcatttagtcccttaacttattttttggttttgttttggtcccttaactattaaaagtttcgttttggtc 17934060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 19253099 - 19253046
Alignment:
Q  244 taacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    |||||||||||  ||||||||||||||||||||| ||| ||| || ||||||||    
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaatttg 19253046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 32999812 - 32999869
Alignment:
Q  240 cccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    ||||||||||||||| | || ||| ||||||||| ||||||||||| |||| ||||||    
T  32999812 cccttaacttattttaatttctcagtttggtcccttaactattaaatgttttaatttg 32999869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 52705410 - 52705349
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||| ||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  52705410 tccctcaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 52705349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 2088855 - 2088965
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaatt 336  Q
    ||||||||| ||||||| | || ||| || |||||| ||| ||||||| ||||||||||||||  ||||| || ||| ||||| |||||||||||| |||    
T  2088855 gtcccttaatttattttaatttctcagttaggtcccttaattattaaatgtttcaatttggtc-cttatctttgttttcatca-tcaatttggtcctatt 2088952  T
Q  337 ttatccattttaa 349  Q
    ||||  |||||||    
T  2088953 ttattaattttaa 2088965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 7583483 - 7583551
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||| ||||||||||||| | ||||| |||||||| |||||||| ||  || |||||||||||| ||||    
T  7583483 gtccattaacttattttcggatttcattttggtccactaactataaagtgtctcaatttggtctcttat 7583551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 303
Target Start/End: Original strand, 53901583 - 53901647
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttt 303  Q
    |||||||| ||||||| | || ||| ||| ||||| ||||||||||| |||| ||||||||||||    
T  53901583 tcccttaatttattttaatttctcagtttagtcccttaactattaaatgttttaatttggtcttt 53901647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 233 - 456
Target Start/End: Complemental strand, 49923873 - 49923649
Alignment:
Q  233 atttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtcc 332  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||    
T  49923873 atttggtcccttaacttattttcagtttttaatttggtcccttaactattaaacgtttcaaattggtcctttatcttcttttcatcattcaatttggccc 49923774  T
Q  333 aattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaatttt 431  Q
     |||||||  |||||||| |||       ||||| ||||||||| ||||| ||||||| |||||||| |||||||||||||  | | |||||||| ||||    
T  49923773 tattttatttattttaaccctcaagaaaaggagaccgttggatagatgaggtctatcagatctaactgtgtatcaccaacacgtgatttattttactttt 49923674  T
Q  432 cttcatcttcttccttcatcttcat 456  Q
    |||||||||||||| ||||||||||    
T  49923673 cttcatcttcttccctcatcttcat 49923649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 222 - 413
Target Start/End: Original strand, 54372743 - 54372934
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  54372743 cttaatacatcatttggtcccttaacttattttccgttttcaatttggtcctctaactattaaacgttccaaattggtcctttatcttctttccatcatt 54372842  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca 413  Q
    ||||||||||| ||||||| ||||||||| | |       ||||| ||||||||||||||| ||||| | |||||||| |||||||||||||    
T  54372843 caatttggtcctattttattcattttaacccccaagaaaaggagaccgttggataaatgaggtctattagatctaactgtgtatcaccaaca 54372934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 222 - 476
Target Start/End: Complemental strand, 37642660 - 37642395
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| || |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  | ||| ||||||||||||||||||||    
T  37642660 cttaatacattatttggtcccttaacttattttctgttttcaatttagtcccctaactattaaacgtttcaaaatagtcctttatcttctttccatcatt 37642561  T
Q  322 caatttggtccaattttatccattttaacactc--nnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatc---- 415  Q
    ||||||||||| |||| || ||||||||| |||         ||||| | ||||||||||||| | ||||| |||||| | ||||||||||||| |        
T  37642560 caatttggtcctatttcattcattttaac-ctccaaaaaaaaggagaccattggataaatgaggtttatcagatctaattgtgtatcaccaacacctgat 37642462  T
Q  416 taattattttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 476  Q
    | ||||||||| |||||||||||||||||      ||||||||||||||||||||||||||||||||    
T  37642461 ttattattttacttttcttcatcttcttccctcatcttcatcttcatacaaccttcatcaatcttca 37642395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 222 - 413
Target Start/End: Complemental strand, 54374071 - 54373880
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||    
T  54374071 cttaatacatcatttgatcccttaacttattttcagttttcaatttggtcccctaactattaaacgttctaaattggtcctttatcttctttccatcatt 54373972  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca 413  Q
    ||||||||||| ||||||| ||||||||| | |       ||||| |  |||||||||||| ||||| | |||||||| |||||||||||||    
T  54373971 caatttggtcctattttattcattttaacccccaagaaaaggagaccactggataaatgaggtctataagatctaactgtgtatcaccaaca 54373880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 243 - 476
Target Start/End: Original strand, 49922525 - 49922765
Alignment:
Q  243 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatcc 342  Q
    |||| ||||||| |||||| |||||||||   ||| |||||||| |||||| ||||||||||||||||||||  ||||||||||||  || ||||||| |    
T  49922525 ttaatttatttttagtttttaatttggtcttttaattattaaacatttcaaattggtcttttatcttctttctgtcattcaatttgaccctattttattc 49922624  T
Q  343 attttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaattttcttcatcttc 441  Q
    |||||||| |||        |||| ||||||||| ||||| ||||||| |||||||| |||| ||||||||  | | |||||||| ||||| ||||||||    
T  49922625 attttaaccctcaagaaaatgagaccgttggatagatgaggtctatcagatctaactgtgtagcaccaacacatgatttattttacttttcgtcatcttc 49922724  T
Q  442 tt------ccttcatcttcatacaaccttcatcaatcttca 476  Q
    ||       ||||||||||||||||||||||||||||||||    
T  49922725 tttcctcaacttcatcttcatacaaccttcatcaatcttca 49922765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 248 - 477
Target Start/End: Original strand, 5546940 - 5547172
Alignment:
Q  248 ttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccatttt 347  Q
    |||||||  ||||||||||||| |||||||||||||||||| |||| |||||| |||||||||||| ||||||| |||||  |   ||||||| ||||||    
T  5546940 ttattttatgttttcaatttgg-cccctaactattaaacgtatcaaattggtcctttatcttcttttcatcatttaatttaat---attttattcatttt 5547035  T
Q  348 aacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatc-taattattttaattttcttcatcttcttc-- 444  Q
    ||||| |       ||||| ||||||||||||||  ||||||| |||||| | || |||||||||| |  | |||||||| |||| |||||| |||||      
T  5547036 aacacccaaaaaaaggagaccgttggataaatgacgtctatcagatctaagtgtgaatcaccaacaccagatttattttactttttttcatcatcttcct 5547135  T
Q  445 ----cttcatcttcatacaaccttcatcaatcttcac 477  Q
        |||||||||||||||||||||||||||||||||    
T  5547136 ccatcttcatcttcatacaaccttcatcaatcttcac 5547172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 275 - 446
Target Start/End: Complemental strand, 20945543 - 20945371
Alignment:
Q  275 taactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacactcnnnnnnnggag-atcgttgg 373  Q
    |||||||||||||||||| ||||||  ||| |||| |||||||||||||| ||||||| |||| ||  |||||||| |||        ||| | ||||||    
T  20945543 taactattaaacgtttcattttggttctttctcttatttccatcattcaacttggtcctatttcattaattttaac-ctcctaaaaaagaggaccgttgg 20945445  T
Q  374 ataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttcct 446  Q
    ||||||||| ||||| | |||||||| ||||||||||||| |||| |||||||| ||| |||||||||||||||    
T  20945444 ataaatgagttctattagatctaactgtgtatcaccaacacctaatttattttagtttgcttcatcttcttcct 20945371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 445
Target Start/End: Complemental strand, 21570542 - 21570320
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcat 320  Q
    ||||||| ||| ||| ||||||||||||| ||    ||||| | ||||||||||||||||||||||||||||||||||| |||||| || ||| |||||     
T  21570542 cttaatacatcgtttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacgtttcaatttggtcatttatctttgttttcatca- 21570444  T
Q  321 tcaatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt 420  Q
    |||||||| ||| |||||||  |||||||  |||       | ||| ||||||||||| ||| ||||||| ||||||   |||||||||| |  ||||||    
T  21570443 tcaatttgatcctattttattaattttaaacctctcaaaaagaagaccgttggataaaggaggtctatcagatctaatcgtgtatcaccagcgcctaatt 21570344  T
Q  421 attttaattttcttcatcttcttcc 445  Q
    || || | |||||||||||||||||    
T  21570343 atatt-actttcttcatcttcttcc 21570320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 11115099 - 11115040
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  11115099 cttaatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactat 11115040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 365 - 446
Target Start/End: Original strand, 20944416 - 20944498
Alignment:
Q  365 gatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttcct 446  Q
    |||||||||||||||||||||||| | |||||||  ||||||||||||| |||| |||||||| ||| |||||||||||||||    
T  20944416 gatcgttggataaatgagatctattagatctaaccgtgtatcaccaacacctaatttattttagtttgcttcatcttcttcct 20944498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 27408760 - 27408838
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||  || |||||||||||    
T  27408760 cttaatacatcatttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtc 27408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 37558995 - 37559073
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| || ||||||||||||||  ||||||||||||||||||||||||| ||| || |||||||||||    
T  37558995 cttaatacatcatttggttccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtc 37559073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 37560418 - 37560340
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  || |||||||||||    
T  37560418 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtc 37560340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 43894102 - 43894180
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||| |||||||||||||||||||  ||||||| ||||||||||||||||| ||| || |||||||||||    
T  43894102 cttaatacatcatatagtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtc 43894180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 49923915 - 49923858
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaact 279  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  49923915 cttaatatatcatttggtcccttaacttattttcagttttcaatttggtcccttaact 49923858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 6616330 - 6616271
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  6616330 cttaatacatcatttggtcccttaacttattttccgttttcactttggtcccctaactat 6616271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 33377483 - 33377405
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||   |||||||||||||||||||||||| ||  || |||||||||||    
T  33377483 cttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtc 33377405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 498 - 550
Target Start/End: Complemental strand, 54373837 - 54373785
Alignment:
Q  498 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||||||||||    
T  54373837 aaaattcatcatttcaacttcaacaaaaaccacaaaatcaaacatttaaattt 54373785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 5417317 - 5417376
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    ||||||||||||||||| | |||||| ||||||||| ||||||||||| |||||||||||    
T  5417317 gtcccttaacttattttaatttttcagtttggtcccttaactattaaatgtttcaatttg 5417376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 5548725 - 5548674
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgttt 290  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  5548725 tcccttaacttattttccgttttcaatttaatcccctaactattaaacgttt 5548674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 21569291 - 21569334
Alignment:
Q  266 ttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  21569291 ttggtcccctaactattaaacgtttcaatttggtcatttatctt 21569334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 29686253 - 29686312
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||| |||||||    
T  29686253 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactat 29686312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 39590938 - 39590997
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  39590938 cttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactat 39590997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 47668716 - 47668657
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||| ||||||||||||| ||||||| |||||||||||||||||    
T  47668716 cttaatacatcatttggtcctttaacttattttctgttttcactttggtcccctaactat 47668657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 86800 - 86878
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||||||| ||||| ||||||| |||||||| |||||| |||||||||| || | | |||||||||||    
T  86800 cttaatacatcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtc 86878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 11482809 - 11482871
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||| ||||||||||||||    
T  11482809 gtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtc 11482871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 55953971 - 55953893
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||  ||||||||||||||||   |||||||||||||||| ||||||| ||| || |||||||||||    
T  55953971 cttaatatatcatttgatcccttaacttatttttgattttcaatttggtcccataactataaaatgtctcaatttggtc 55953893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 300
Target Start/End: Complemental strand, 1273550 - 1273474
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||| ||||||| |||||||||||||||||  ||||| ||||||||||||||||||| ||  || |||||||||||    
T  1273550 ttaatatatcatttggtcccttaacttatttttggtttt-aatttggtcccctaactataaagtgtctcaatttggtc 1273474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 43709977 - 43709912
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttt 303  Q
    ||||||||||||||||| | || ||| | | ||||| |||||||||||||||||||||||||||||    
T  43709977 gtcccttaacttattttaatttctcagtgtagtcccttaactattaaacgtttcaatttggtcttt 43709912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 476
Target Start/End: Complemental strand, 46425973 - 46425862
Alignment:
Q  369 gttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcat---acaacctt 464  Q
    |||||||||| ||| || |||| || ||||  ||||| |||||||||||||| ||| || |||||||||||||||| | ||||||||||   ||||| ||    
T  46425973 gttggataaaggaggtccatcagatttaacggtgtataaccaacatctaatttattctatttttcttcatcttcttacctcatcttcatcacacaacatt 46425874  T
Q  465 catcaatcttca 476  Q
    ||||||||||||    
T  46425873 catcaatcttca 46425862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 52658924 - 52658985
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    |||||||||||||||||   |||||| ||||||||||||||||| ||| |||||||||||||    
T  52658924 gtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggt 52658985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 30682717 - 30682797
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctt 302  Q
    ||||||| || |||| ||||||||||||||||| |||||||| ||||||||| ||||||| ||  || | |||||||||||    
T  30682717 cttaatacataatttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtctt 30682797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 550
Target Start/End: Complemental strand, 49923595 - 49923543
Alignment:
Q  498 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    |||||| ||| |||| ||||||||||||| |||||||||||||||||||||||    
T  49923595 aaaattcatcatttctacttcaacaaaaaccacaaaatcaaacatttaaattt 49923543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 306590 - 306652
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 300  Q
    |||||||||||||||||  | ||||||||||||||||||||| |||||| ||||||||||||||    
T  306590 gtcccttaacttatttttggatttcaatttggtcccctaact-ttaaactgtttcaatttggtc 306652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 11113739 - 11113818
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| ||||||| ||| |||||||||||||| ||||||| ||| ||||| ||||||| ||  || ||||||||||||    
T  11113739 cttaatacatcatttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtct 11113818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 21104429 - 21104350
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| ||||||| || |||||| |||||||  ||||||| ||||||||||||||||| ||  || ||||||||||||    
T  21104429 cttaatatatcatttggttccttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtct 21104350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 35789709 - 35789650
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||||||| |||||||||||||  ||||||| ||||||||| |||||||    
T  35789709 cttaatacatcatttagtctcttaacttatttttggttttcactttggtcccgtaactat 35789650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 39592408 - 39592349
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| ||| |||||||||||||    
T  39592408 cttaatatatcatttggtcccttaacttattttatgttttcactttagtcccctaactat 39592349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 46794853 - 46794915
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 300  Q
    |||||||||||||||||  | ||||||||||||||||||||| |||||| ||||||||||||||    
T  46794853 gtcccttaacttatttttggatttcaatttggtcccctaact-ttaaactgtttcaatttggtc 46794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 2310885 - 2310823
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||| || |||||||||||    
T  2310885 gtcccttaacttattttcgaatttcattttggtcccctaactataaaatgtctcaatttggtc 2310823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 476
Target Start/End: Complemental strand, 5548627 - 5548514
Alignment:
Q  369 gttggataaatgagatctatcaaatctaactatgtatcaccaacatctaat-tattttaattttcttcatct-tcttc-----cttcatcttcatacaac 461  Q
    ||||||| |||||| ||||||||||||||||||| || ||||||| ||||| |||||||  ||| ||||||| | |||     |||||||||||||||||    
T  5548627 gttggattaatgaggtctatcaaatctaactatgaattaccaacacctaatatattttacattt-ttcatctcttttcctcatcttcatcttcatacaac 5548529  T
Q  462 cttcatcaatcttca 476  Q
    ||| |||||||||||    
T  5548528 cttaatcaatcttca 5548514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 12396977 - 12396915
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  12396977 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 12396915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 15786949 - 15787027
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||| ||||||||||||  ||||||| |||| |||||||||||| ||  || |||||||||||    
T  15786949 cttaatacatcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtc 15787027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 23752029 - 23752091
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| || ||||||||||||||||||||| | ||  || |||||||||||    
T  23752029 gtcccttaacttatttttagatttcaatttggtcccctaactttaaattgtctcaatttggtc 23752091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 26045145 - 26045203
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 296  Q
    ||||||||||||||||| | || ||| | ||||||| ||||||||||||||||||||||    
T  26045145 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaattt 26045203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 26376342 - 26376404
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||| |||||||  ||||||| |||| |||||||||||| |||||| |||||||||||    
T  26376342 gtcccttaaattatttttggttttcattttgatcccctaactataaaacgtctcaatttggtc 26376404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 29833385 - 29833447
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||| ||| ||| || |||||||||||    
T  29833385 gtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtc 29833447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 32617227 - 32617301
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctttta 305  Q
    ||||||||||||||||||||||||  | ||| | ||||||||| ||||||||||| |||||  ||||||| ||||    
T  32617227 tcatttagtcccttaacttattttttggttttattttggtcccttaactattaaaagtttcgttttggtccttta 32617301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 46796145 - 46796067
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||| ||| |||||||||||||||||  ||||| | ||||||||||||||||| ||  || |||||||||||    
T  46796145 cttaatacatcgtttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtc 46796067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 47573747 - 47573685
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| | ||||||| |||||||||||||||| |||||||||    
T  47573747 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgttttaatttggtc 47573685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 42713462 - 42713547
Alignment:
Q  224 taatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    ||||| ||||||| |||| |||||||| ||    ||||| ||||| |||| |||||||||| |||||||||||||| |||||||||    
T  42713462 taatatatcatttggtcctttaacttaattctttttttcgatttgatcccttaactattaagcgtttcaatttggttttttatctt 42713547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 550
Target Start/End: Original strand, 5547181 - 5547233
Alignment:
Q  498 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    |||||| ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  5547181 aaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 5547233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 31204595 - 31204678
Alignment:
Q  266 ttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaattttatccattttaa 349  Q
    ||||||||||||||||||||||||||||  ||||| |||||| || |||  |||| |||||||||||| |||||||  |||||||    
T  31204595 ttggtcccctaactattaaacgtttcaaaatggtcatttatctttattttaatca-tcaatttggtcctattttattaattttaa 31204678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 309
Target Start/End: Complemental strand, 31205817 - 31205741
Alignment:
Q  233 atttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    |||| ||||||||||||| ||    ||||| | ||||||||||||||||||||||||||||  ||||| ||||||||    
T  31205817 atttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacgtttcaaaatggtcctttatctt 31205741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 35787815 - 35787871
Alignment:
Q  244 taacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||  ||||||| |||||||| |||||||| ||| ||||||||||||||    
T  35787815 taacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtc 35787871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 491 - 550
Target Start/End: Complemental strand, 37642375 - 37642315
Alignment:
Q  491 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    ||||||||||| || ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  37642375 ttctttcaaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 37642315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 96784 - 96741
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||||||||||||||  ||||||| |||||||||||||||||    
T  96784 gtcccttaacttattttatgttttcactttggtcccctaactat 96741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 10403277 - 10403335
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| |||||||||||||| ||||||||||  ||||| | |||||||||||||||||    
T  10403277 cttaatacatcatttagtccct-aacttatttttggtttttactttggtcccctaactat 10403335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 31711089 - 31711168
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||  ||||||| ||  || ||||||||||||    
T  31711089 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtct 31711168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 305
Target Start/End: Original strand, 36611056 - 36611127
Alignment:
Q  234 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctttta 305  Q
    |||||||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||  ||||||| ||||    
T  36611056 tttagtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcgttttggtccttta 36611127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 38371924 - 38371853
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaa 293  Q
    ||||||| ||||||  ||| |||||||||||||| ||||||| |||| |||||||||||  |||||| ||||    
T  38371924 cttaatacatcattcggtctcttaacttattttctgttttcagtttgatcccctaactaaaaaacgtctcaa 38371853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 38555379 - 38555336
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||||||||||||| |||||| | |||||||||||||||||    
T  38555379 gtcccttaacttatttttagtttttactttggtcccctaactat 38555336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 44128453 - 44128394
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||| ||| |||| ||||||||||||   ||||||||||||||||||||||||    
T  44128453 cttaatacatcgtttggtcctttaacttatttttcattttcaatttggtcccctaactat 44128394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 15787621 - 15787543
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||  | |||||| |||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  15787621 cttaatatatcatttttttccttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtc 15787543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 28103597 - 28103527
Alignment:
Q  230 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||||||||||||  | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  28103597 atcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtc 28103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 28589782 - 28589844
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaa 285  Q
    ||||||| ||||||  |||||||| | |||||||||||||| ||||||||| ||| |||||||    
T  28589782 ttaataggtcatttgatcccttaaataattttcagttttcattttggtcccataagtattaaa 28589844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 29688093 - 29688039
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtccccta 276  Q
    ||||||| || |||| |||||||||||||||||  ||||||| ||||||||||||    
T  29688093 cttaatacattatttggtcccttaacttatttttggttttcactttggtccccta 29688039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 33376215 - 33376293
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||| |||||||||||||  ||||||||||| || |||||| ||| ||  || |||||||||||    
T  33376215 cttaatacatcatttggtctcttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtc 33376293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 38553927 - 38554005
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    |||||| ||||||| ||||||||| |||||||| ||||| | |||||||  |||||||| ||  || ||||||||||||    
T  38553927 ttaatacatcatttggtcccttaatttattttctgtttttattttggtcttctaactataaagtgtctcaatttggtct 38554005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 44217627 - 44217688
Alignment:
Q  279 tattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaattttat 340  Q
    |||||||||||| |||||||||||||||| || ||| ||||| |||||||||||| |||||||    
T  44217627 tattaaacgttttaatttggtcttttatctttgttttcatca-tcaatttggtcctattttat 44217688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 44305098 - 44305020
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||  | | ||||||||||||  ||||||||||||||||||||||||  ||  || |||||||||||    
T  44305098 cttaatatatcatttgattcattaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtc 44305020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 456
Target Start/End: Original strand, 48499507 - 48499598
Alignment:
Q  363 gagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||||||||||| |  ||| ||||||| || | ||  |||||||||||||||||||  |||| | ||| |||||||||||||| |||||||||    
T  48499507 gagatcgttggattacagaggtctatcagattttacggtgtatcaccaacatctaat--tttttactttattcatcttcttcctccatcttcat 48499598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 50498075 - 50498013
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||||| | || ||| | ||||||| ||| ||||||||||||||||||||||    
T  50498075 gtcccttcacttattttaatttctcagtgtggtcccttaattattaaacgtttcaatttggtc 50498013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 32617644 - 32617575
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||| |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||  |||||||    
T  32617644 tcatttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcgttttggtc 32617575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 303
Target Start/End: Original strand, 47242965 - 47243030
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttt 303  Q
    ||||||||||||||||| | || ||| |||  |||| ||||||||||| |||| ||||||||||||    
T  47242965 gtcccttaacttattttaatttctcagtttaatcccttaactattaaatgttttaatttggtcttt 47243030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 47244092 - 47244031
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||| ||||||| | || ||| | ||||||| |||||||||||| |||||||||||||    
T  47244092 tcccttaatttattttaatttctcagtgtggtcccttaactattaaacatttcaatttggtc 47244031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 47572600 - 47572661
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||| | || |||  || ||||| ||||||||||| ||||||||||||||    
T  47572600 tcccttaacttattttaatttctcagcttagtcccttaactattaaatgtttcaatttggtc 47572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 48413653 - 48413592
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||| | ||  || | |||| || ||||||||||||||||||||||||||    
T  48413653 tcccttaacttattttaatttcccagtgtggttccttaactattaaacgtttcaatttggtc 48413592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 5688727 - 5688679
Alignment:
Q  251 ttttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    |||| |||||||||||||||||||||||||| ||  || ||||||||||    
T  5688727 tttttagttttcaatttggtcccctaactataaagtgtctcaatttggt 5688679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 15445449 - 15445517
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||||||||||||||  | ||||| ||||||||||||| ||| ||  || |||||||||||| ||||    
T  15445449 gtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtctcttat 15445517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 40143662 - 40143710
Alignment:
Q  233 atttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||| ||| ||||||||||||| |||||||| ||| |||||||||||||    
T  40143662 atttggtctcttaacttatttttagttttcattttagtcccctaactat 40143710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 49922786 - 49922846
Alignment:
Q  491 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    ||||||||||| || ||| ||| || |||||||||||  ||||||||||||||||||||||    
T  49922786 ttctttcaaaaattcatcattttaatttcaacaaaaactacaaaatcaaacatttaaattt 49922846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 52880827 - 52880895
Alignment:
Q  239 tcccttaacttattttcag-ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    ||||||||||||||||| | |||| | ||||||||||||||||| ||  || ||||||||||| |||||    
T  52880827 tcccttaacttattttcggatttttattttggtcccctaactataaagtgtctcaatttggtcctttat 52880895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 52981250 - 52981210
Alignment:
Q  241 ccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||||||||||| |||||||| |||||||||| ||||||    
T  52981250 ccttaacttatttttagttttcattttggtccccaaactat 52981210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 53400200 - 53400260
Alignment:
Q  240 cccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||| || ||||| ||||||||| ||||||| ||  || |||||||||||    
T  53400200 cccttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtc 53400260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 9e-53; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 223 - 456
Target Start/End: Original strand, 682263 - 682497
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattc 322  Q
    |||||| ||| ||| || ||||||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  682263 ttaatacatcgtttggttccttaacttattttctgttttcaatttggtcctctaactattaaacgttccaaattggtcatttatcttctttccatcattc 682362  T
Q  323 aatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca-tctaatta 421  Q
    |||||||||  ||||||| ||||||||  | |       ||||| ||||||||||||||| ||||||| ||||| || ||||||||||||| |  | |||    
T  682363 aatttggtcttattttattcattttaatccacaaaaaaaggagaccgttggataaatgaggtctatcagatctagctgtgtatcaccaacacttgattta 682462  T
Q  422 ttttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||| |||||||||||||||||| ||||||||||    
T  682463 ttttacttttcttcatcttcttccctcatcttcat 682497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 222 - 456
Target Start/End: Complemental strand, 683659 - 683426
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  683659 cttaatatatcatttggtcctttaacttattttctgttttcaatttggtcccctacctattaaacgtttcaaattggtcttttatcttctttccttcatt 683560  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aatt 420  Q
    ||||||||||| ||||||| |||||||  |  |        |||| ||||| ||||||||| ||||||| |||||||| | |||| |||||| || | ||    
T  683559 caatttggtcccattttattcatttta--atccaaaaaaaagagaccgttgaataaatgaggtctatcagatctaactgtatatctccaacacctgattt 683462  T
Q  421 attttaattttcttcatcttcttccttcatcttcat 456  Q
    |||||| ||||||||||||| || | ||||||||||    
T  683461 attttacttttcttcatcttatttcctcatcttcat 683426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9665908 - 9665829
Alignment:
Q  1 ttgcgtgttgaacaagaaatgatgttgatgatgaagagtttgaatcaccattgctactacccgattttctgggaatcttcatc 83  Q
    ||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9665908 ttgcgtgttgaacaagaaatgatg---acgatgaagagtttgaatcaccattgctactactcgattttctgggaatcttcatc 9665829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 9665514 - 9665466
Alignment:
Q  165 tagaaaaataaaattgtataaccgtcgttttgtgttgtcaaaatagtta 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9665514 tagaaaaataaaattgtataaccgtcgttttgtgttgtcaaaatagtta 9665466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 31738360 - 31738438
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||| ||| |||||||||||||||||  ||||||||||||||||||||||||| ||  ||||||||||||||    
T  31738360 cttaatacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtc 31738438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 8411083 - 8411163
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctt 302  Q
    ||||||| |||||||||| ||||||||||||||  ||||||||||| ||||||||||||| ||  || |||||||||||||    
T  8411083 cttaatacatcatttagttccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctt 8411163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 1757597 - 1757535
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||||||||||||||||||    
T  1757597 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtc 1757535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 5311276 - 5311354
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||| ||||||||||||| ||  || |||||||||||    
T  5311276 cttaatacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtc 5311354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 33802136 - 33802077
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  33802136 cttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactat 33802077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 8412435 - 8412357
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| || |||| |||||||||||||||||  ||||||||||| ||||||||||||| ||  || |||||||||||    
T  8412435 cttaatacattatttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtc 8412357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 8447230 - 8447296
Alignment:
Q  234 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  8447230 tttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 8447296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 8456034 - 8456100
Alignment:
Q  234 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  8456034 tttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 8456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 27108293 - 27108217
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 298  Q
    |||||||||||  |  ||||||||||||||||| | || ||| ||||||||| |||||||||||||||| |||||||    
T  27108293 cttaatagatctctcggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgttttaatttgg 27108217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 27150090 - 27150014
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 298  Q
    |||||||||||  |  ||||||||||||||||| | || ||| ||||||||| |||||||||||||||| |||||||    
T  27150090 cttaatagatctctcggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgttttaatttgg 27150014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 18139606 - 18139547
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||| ||||||| |||| ||| ||||||||    
T  18139606 cttaatacatcatttggtcccttaacttattttccgttttcactttgatcctctaactat 18139547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 1692086 - 1692152
Alignment:
Q  237 agtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttt 303  Q
    |||||||||| ||||||| | |||||| ||||||| | ||||||||||| |||||||||| ||||||    
T  1692086 agtcccttaatttattttaatttttcagtttggtctcttaactattaaatgtttcaatttagtcttt 1692152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 1693079 - 1693022
Alignment:
Q  243 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||| | |||||| ||||||||| |||||||||||| ||| |||||||||    
T  1693079 ttaacttattttaatttttcagtttggtcccttaactattaaacattttaatttggtc 1693022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 368 - 465
Target Start/End: Original strand, 1948861 - 1948958
Alignment:
Q  368 cgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcatacaaccttc 465  Q
    ||||||||||| |||||  || | || |||| ||||||||||||||  |||||| ||| | |||| | |||||||||||||||||||||  |||||||    
T  1948861 cgttggataaaagagattcataagatgtaacgatgtatcaccaacacataattaattttaatttcattatcttcttccttcatcttcatctaaccttc 1948958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 11724398 - 11724337
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||| | |||||  | ||||| | ||||||||||||||||||||||||||    
T  11724398 tcccttaacttattttaatttttcggtgtggtcacttaactattaaacgtttcaatttggtc 11724337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 22300005 - 22299944
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  22300005 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtc 22299944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 23644316 - 23644263
Alignment:
Q  404 atcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcat 456  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||| |||||||    
T  23644316 atcaccaacacctaatttattttacttttcttcatcttcttccttcctcttcat 23644263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 9899571 - 9899631
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 291  Q
    |||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||    
T  9899571 tcatttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 9899631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 13173050 - 13173118
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||||||||||||||| | ||| | ||||||||||||||||| ||  || |||||||||||| ||||    
T  13173050 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtctcttat 13173118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 19368621 - 19368553
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||||||||||||||| | ||||| |||||||| |||||||| ||  || |||||||||||| ||||    
T  19368621 gtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtctcttat 19368553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 25439182 - 25439099
Alignment:
Q  266 ttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaattttatccattttaa 349  Q
    |||||||  ||| ||| ||||||||||||||||||||||||| || ||| ||| | ||||||||||||||||||||  |||||||    
T  25439182 ttggtcctttaattataaaacgtttcaatttggtcttttatctttgttttcatta-tcaatttggtccaattttattaattttaa 25439099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 30860379 - 30860319
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 291  Q
    ||||| ||||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||    
T  30860379 tcattcagtcccttaacttattttttgatttcattttggtcccttaactattaaaagtttc 30860319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 13176451 - 13176368
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||| || |||| ||||||||| | |||||| | ||| | ||| ||||||||||||| ||| || |||||||||||||||||    
T  13176451 ttaatacatgatttggtcccttaattcattttcggattttattttagtcccctaactataaaatgtctcaatttggtcttttat 13176368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 13562379 - 13562328
Alignment:
Q  258 ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    ||||||| |||||||| |||||||||||||||||||  ||||| ||||||||    
T  13562379 ttttcaaattggtcccttaactattaaacgtttcaaaatggtcctttatctt 13562328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 18230363 - 18230406
Alignment:
Q  266 ttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  18230363 ttggtcccctaaccattaaacgttttaatttggtcctttatctt 18230406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 453
Target Start/End: Original strand, 23638574 - 23638657
Alignment:
Q  371 tggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatctt 453  Q
    ||||||||  ||||||||||||| |||| ||||||||| || |  ||||| |||||| || |||||||||||| ||||||||||    
T  23638574 tggataaaatagatctatcaaatttaacgatgtatcacaaatacttaatttattttacttgtcttcatcttctcccttcatctt 23638657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 309
Target Start/End: Complemental strand, 24318183 - 24318096
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 309  Q
    |||||| |||||||| ||||||||||||| ||    ||||| | |||||||| ||| |||||||| ||| ||||||||| ||||||||    
T  24318183 cttaattgatcatttggtcccttaacttaattctttttttcgaattggtcccttaattattaaactttttaatttggtcctttatctt 24318096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 9927619 - 9927681
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  ||||| | ||||||||||||||||| ||  || |||||||||||    
T  9927619 gtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtc 9927681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 14174121 - 14174175
Alignment:
Q  243 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    |||||||||||| | || ||| |||||||| ||||||||||||| ||||||||||    
T  14174121 ttaacttattttaatttctcagtttggtccactaactattaaacttttcaatttg 14174175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 14178657 - 14178711
Alignment:
Q  243 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    |||||||||||| | || ||| |||||||| ||||||||||||| ||||||||||    
T  14178657 ttaacttattttaatttctcagtttggtccactaactattaaacttttcaatttg 14178711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 548
Target Start/End: Original strand, 18498261 - 18498311
Alignment:
Q  498 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaat 548  Q
    |||||| ||| |||||||||||||||||| |||| |||||||| |||||||    
T  18498261 aaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaat 18498311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 19048262 - 19048324
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||  |||||||    
T  19048262 gtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtc 19048324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 19367730 - 19367792
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||  || |||||||||||    
T  19367730 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 19367792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 24317099 - 24317133
Alignment:
Q  275 taactattaaacgtttcaatttggtcttttatctt 309  Q
    |||||||||||||||||||||||||| ||||||||    
T  24317099 taactattaaacgtttcaatttggtcatttatctt 24317133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 28225437 - 28225499
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||  || |||||||||||    
T  28225437 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 28225499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 31740375 - 31740313
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||| ||||||||||||  ||||||||||||||||| ||||||| ||  || |||||||||||    
T  31740375 gtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtc 31740313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 682550 - 682595
Alignment:
Q  505 atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  682550 atcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 682595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 18773668 - 18773729
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||  | ||||| ||||||||||||| ||| ||| || |||||||||||    
T  18773668 tcccttaacttatttttggatttcattttggtcccctaattataaaatgtctcaatttggtc 18773729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 26584140 - 26584079
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    |||||||||||||||||| | ||| | ||||||||||||||||| ||  || ||||||||||    
T  26584140 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggt 26584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 30859931 - 30860000
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||| |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||  |||||||    
T  30859931 tcatttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcgttttggtc 30860000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 10673650 - 10673690
Alignment:
Q  266 ttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||||| |||||| ||||||||||||||||||| |||||    
T  10673650 ttggtcccttaactaataaacgtttcaatttggtcctttat 10673690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 303
Target Start/End: Original strand, 25437833 - 25437861
Alignment:
Q  275 taactattaaacgtttcaatttggtcttt 303  Q
    |||||||||||||||||||||||||||||    
T  25437833 taactattaaacgtttcaatttggtcttt 25437861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 5e-48; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 259 - 456
Target Start/End: Original strand, 20921544 - 20921742
Alignment:
Q  259 tttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacact-cnnn 357  Q
    |||||| |||||||||||| ||||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||||| ||||||||| ||         
T  20921544 tttcaaattggtcccctaaatattaaacgtttcaaattggtccttgatcttctttccatcattcaatttggtcctattttattcattttaaccctaaaaa 20921643  T
Q  358 nnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcat 456  Q
        |||||  |||||||||||||| ||||||| |||||||| | ||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  20921644 aaaaggagactgttggataaatgaggtctatcatatctaactgtatatcaccaacacctaattattttctttttcttcatcttcttccttcatcttcat 20921742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 455
Target Start/End: Original strand, 12364206 - 12364420
Alignment:
Q  241 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttat 340  Q
    |||||| |||||||| ||||| |||||| ||  ||||||||||||||||| || |||||| |||||||||||||  || ||||||||||||| |||| ||    
T  12364206 ccttaatttattttctgtttttaatttgatcatctaactattaaacgttttaaattggtcatttatcttctttcagtccttcaatttggtcctatttaat 12364305  T
Q  341 ccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatctt 440  Q
      |||||||| | |       || || | ||||||||||||| ||||||| |||||||| |||||||||||||  |||||  |||  |||||||||||||    
T  12364306 ttattttaacccccaaaaaaaggggaccattggataaatgaggtctatcagatctaactgtgtatcaccaacacataatttattttcttttcttcatctt 12364405  T
Q  441 cttccttcatcttca 455  Q
    ||||| |||||||||    
T  12364406 cttccctcatcttca 12364420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 291 - 469
Target Start/End: Complemental strand, 12366066 - 12365891
Alignment:
Q  291 caatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatca 390  Q
    |||| ||||| ||||| ||||||||||||||||||||||||| ||||||| ||||||||| | |       ||||| |||||||||||||||||||||||    
T  12366066 caatctggtcctttatattctttccatcattcaatttggtcctattttattcattttaacccccaaaat--ggagaccgttggataaatgagatctatca 12365969  T
Q  391 aatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcatacaaccttcatca 469  Q
     || ||||| ||||||||||||| || |||  |||  |||||||||||||||||| |||||||||| ||| ||||||||    
T  12365968 gatataactgtgtatcaccaacacctgatttattttcttttcttcatcttcttccctcatcttcat-caatcttcatca 12365891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 20921478 - 20921556
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||    
T  20921478 cttaatatatcatttggtcctttaatttattttcaattttcaatttggtcccctaaatattaaacgtttcaaattggtc 20921556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 42596557 - 42596635
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| ||||||||||||||||||  |||| | |||||||||||||||||||||||| |||||||||||    
T  42596557 cttaatacatcatttggtcccttaacttattttcgttttttattttggtcccctaactattaaacgtctcaatttggtc 42596635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 37867753 - 37867831
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||| ||  || |||||||||||    
T  37867753 cttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtc 37867831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 370910 - 370986
Alignment:
Q  368 cgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttcc 445  Q
    ||||||||||||||| ||||||||||||||   ||||||||||||| |||||||| || | |||||||||||||||||    
T  370910 cgttggataaatgaggtctatcaaatctaatggtgtatcaccaacacctaattatatt-actttcttcatcttcttcc 370986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 33553467 - 33553406
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||| | |||||| ||||||| | ||||||||||||||||||||||||||    
T  33553467 tcccttaacttattttaatttttcagtttggtctcttaactattaaacgtttcaatttggtc 33553406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 3255981 - 3255913
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  ||||||||||||||| ||||    
T  3255981 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggtctcttat 3255913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 4630187 - 4630119
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||  || |||||||||||| ||||    
T  4630187 gtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtctcttat 4630119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 23178993 - 23178942
Alignment:
Q  230 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  23178993 atcatttggtcccttaacttatttttagttttcactttggtcccctaactat 23178942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 23590250 - 23590199
Alignment:
Q  230 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  23590250 atcatttggtcccttaacttatttttagttttcactttggtcccctaactat 23590199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 35799509 - 35799588
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 301  Q
    ||||||| |||||||  ||||||||||||||||  ||||||||||| ||||||||||||| ||  || ||||||||||||    
T  35799509 cttaatacatcatttcatcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtct 35799588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 243 - 349
Target Start/End: Original strand, 1257507 - 1257613
Alignment:
Q  243 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatcc 342  Q
    ||||||||||||| |||||||||||  |||| | |||||||||| ||| || ||| || |||||||||||| ||| |||| || |||| | ||||||| |    
T  1257507 ttaacttattttcggttttcaattttatcccttgactattaaacattttaaattgatcatttatcttcttttcattattcgatgtggttctattttattc 1257606  T
Q  343 attttaa 349  Q
    |||||||    
T  1257607 attttaa 1257613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 3665237 - 3665299
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| |||||||| |||||||| ||| ||||||||||||||    
T  3665237 gtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtc 3665299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 11575574 - 11575500
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 296  Q
    ||||||| ||||||| |||| ||||||||||||  ||||| | ||||||||||||||||| ||| ||||||||||    
T  11575574 cttaatacatcatttggtccattaacttatttttggttttaattttggtcccctaactataaaatgtttcaattt 11575500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 41796071 - 41795993
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||||||||||||||||||||   |||||| |||| |||||||||||| ||  || |||||||||||    
T  41796071 cttaatacatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtc 41795993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 372050 - 371959
Alignment:
Q  258 ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaattttatccattttaa 349  Q
    ||||||| || ||||||||||||||||||||||||||||| || |||||| || ||| ||||| |||||||| ||| |||||||  |||||||    
T  372050 ttttcaaattagtcccctaactattaaacgtttcaatttgatcctttatctttgttttcatca-tcaatttgatcctattttattaattttaa 371959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 7038451 - 7038373
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  7038451 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtc 7038373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 33836785 - 33836850
Alignment:
Q  241 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 306  Q
    ||||||||||||||| | ||||| ||||||||||||||||| ||  || ||||||||||| |||||    
T  33836785 ccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcatttat 33836850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 39110083 - 39110152
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||  |||||||    
T  39110083 tcatttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtc 39110152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 2581803 - 2581878
Alignment:
Q  225 aatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||| ||||||| ||||  |||||||||||  |||||||||||| |||||||||||| ||  || |||||||||||    
T  2581803 aatacatcatttggtcctctaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtc 2581878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 3666376 - 3666309
Alignment:
Q  233 atttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||| |||||||||||||||||| | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  3666376 atttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtc 3666309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 32614382 - 32614441
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||| ||||||||   |||||| |||||||||||||||||    
T  32614382 cttaatatatcatttggtcccttagcttattttattttttcattttggtcccctaactat 32614441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 33837858 - 33837815
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||||||||||||||||| ||| | |||||||||||||||||    
T  33837858 gtcccttaacttattttcagattttattttggtcccctaactat 33837815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 35061271 - 35061334
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaa 285  Q
    |||||||| ||||||| |||| ||| | |||||||||||||| ||||||||| |||||| ||||    
T  35061271 cttaataggtcatttaatcccctaattaattttcagttttcattttggtcccataactaataaa 35061334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 7036963 - 7037041
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||| ||||||||||||  | ||||| ||| ||||| ||||||| ||  ||||||||||||||    
T  7036963 cttaatacatcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtc 7037041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 10368503 - 10368445
Alignment:
Q  223 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    |||||| ||||||| ||||||||| |||||||   ||||||||||| ||||||||||||    
T  10368503 ttaatacatcatttggtcccttaatttatttttgattttcaatttgatcccctaactat 10368445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 11386642 - 11386696
Alignment:
Q  243 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 297  Q
    |||||||||||| |||||| ||||||||||| ||||||| ||  |||||||||||    
T  11386642 ttaacttatttttagtttttaatttggtcccttaactataaagtgtttcaatttg 11386696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 12854207 - 12854145
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| || ||||| ||||||||| ||||||| ||  || |||||||||||    
T  12854207 gtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtc 12854145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 20630774 - 20630712
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||| |||||||||| | || ||| |||  |||| ||||||||||||||||||||||||||    
T  20630774 gtccctaaacttattttaatttctcagtttaatcccttaactattaaacgtttcaatttggtc 20630712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 29424715 - 29424653
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  ||||| |  |||||||||||||||| ||  ||||||||||||||    
T  29424715 gtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtc 29424653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 39272309 - 39272251
Alignment:
Q  242 cttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||  | |||||| ||||||||  |||||||||||||||| |||||||||    
T  39272309 cttaacttatttaaatttttcagtttggtcctttaactattaaacgttttaatttggtc 39272251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 42027190 - 42027268
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||| ||| |||||||||||||||||   |||||| |||||||| |||||||  ||| || |||||||||||    
T  42027190 cttaatacatcgtttggtcccttaacttatttttgattttcattttggtcctctaactacaaaatgtctcaatttggtc 42027268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 6706939 - 6707000
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    |||||||||||||||||  | ||||| ||||||||||||||||| ||  || ||||||||||    
T  6706939 gtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggt 6707000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 28109988 - 28109939
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtc 271  Q
    ||||||| || |||| |||||||||||||||||  |||||||||||||||    
T  28109988 cttaatatatgatttggtcccttaacttatttttcgttttcaatttggtc 28109939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 30202986 - 30202945
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaact 279  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  30202986 gtcccttaacttatttttggatttcaatttggtcccctaact 30202945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 36099304 - 36099364
Alignment:
Q  231 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 291  Q
    |||||| |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||    
T  36099304 tcatttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 36099364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 87; Significance: 2e-41; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 476
Target Start/End: Original strand, 35360 - 35611
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| |||||||  ||||||| |||||||||  |||  |||||||||| ||||||||||||||||| || |||||  |||||||||||||||| |||    
T  35360 cttaatatatcatttgttcccttaccttattttctatttataatttggtcctctaactattaaacgttttaaattggttctttatcttctttccattatt 35459  T
Q  322 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-tt 420  Q
    ||| ||||||  ||||||| ||||||||||| |       ||||| | ||||||||||||| | ||||| |||||||| ||||||||||||| |||| ||    
T  35460 caa-ttggtcatattttattcattttaacacccataaaaaggagaccattggataaatgaggtttatcagatctaactgtgtatcaccaacacctaattt 35558  T
Q  421 attttaattttcttcatcttcttccttcatcttcatacaacc-ttcatcaatcttca 476  Q
    |||||| ||||||||||| |    |||||||||||||||||| ||||||||||||||    
T  35559 attttacttttcttcatcat----cttcatcttcatacaacctttcatcaatcttca 35611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 36845 - 36735
Alignment:
Q  242 cttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatc 341  Q
    |||||||||||||| ||||||||||||||| | || |||||||| ||||||| || |||||||||||||||||||||||||||||||||   |||||||     
T  36845 cttaacttattttctgttttcaatttggtctcttacctattaaatgtttcaaattagtcttttatcttctttccatcattcaatttggtgttattttatt 36746  T
Q  342 cattttaacac 352  Q
     ||||||||||    
T  36745 aattttaacac 36735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 476
Target Start/End: Complemental strand, 36685 - 36584
Alignment:
Q  368 cgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcatacaaccttcat 467  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| ||  ||||||| ||| |  || |||||       ||||||||||||||||| || ||    
T  36685 cgttggataaatgaggtctatcagatctaactgtgtatcacccacgcctaattaattttacatttttcat-------cttcatcttcatacaactttaat 36593  T
Q  468 caatcttca 476  Q
    |||||||||    
T  36592 caatcttca 36584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 74; Significance: 1e-33; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 238 - 388
Target Start/End: Complemental strand, 98784 - 98634
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattt 337  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||  || |||||  ||||||||||||||||||||||||||||||| ||||    
T  98784 gtcccttaacttattttcagttttcaatttggtcctctgactattaaacgttctaaattggttctttatcttctttccatcattcaatttggtcctattt 98685  T
Q  338 tatccattttaacactcnnnnnnnggagatcgttggataaatgagatctat 388  Q
    ||| || |||||| |||       ||||| |||| |||||||||| |||||    
T  98684 tattcagtttaaccctcaaaagaaggagaccgttcgataaatgaggtctat 98634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 98046 - 98174
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 321  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||| |  | | |||||||||||||  || |||||| |||||||||||| |||||||    
T  98046 cttaatacatcatttgatcccttaacttattttcagttttcaatttgatgtctttactattaaacgttctaaattggtcctttatcttcttttcatcatt 98145  T
Q  322 caatttggtccaattttatccattttaac 350  Q
    ||||||||||| ||||||| |||||||||    
T  98146 caatttggtcctattttattcattttaac 98174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 490 - 550
Target Start/End: Original strand, 98318 - 98379
Alignment:
Q  490 attctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 550  Q
    |||||||||||| || ||| |||||||||||||||||| |||||||| ||||||||||||||    
T  98318 attctttcaaaaattcatcatttcaacttcaacaaaaaccacaaaattaaacatttaaattt 98379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 476
Target Start/End: Original strand, 98264 - 98295
Alignment:
Q  445 cttcatcttcatacaaccttcatcaatcttca 476  Q
    ||||||||||||||||||||||||||||||||    
T  98264 cttcatcttcatacaaccttcatcaatcttca 98295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 66; Significance: 7e-29; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 258 - 476
Target Start/End: Complemental strand, 1207 - 982
Alignment:
Q  258 ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacactcnnn 357  Q
    ||||||| |||||||| ||||  ||||| |||||||||||| | |||||||| ||| |||||||||||||||||| |||| ||| ||||||||   |       
T  1207 ttttcaaattggtcccttaaccgttaaatgtttcaatttggccctttatcttattttcatcattcaatttggtcctatttcatcaattttaacgtgctaa 1108  T
Q  358 nnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttc------cttcat 450  Q
        ||||| ||||| ||||||||  | ||||| |||||||  ||||||||||||| | || |||||||| |||||||||||||||||      ||||||    
T  1107 aaaaggagaccgttgaataaatgaagtatatcagatctaaccgtgtatcaccaacaccaaatttattttacttttcttcatcttcttccctaatcttcat 1008  T
Q  451 cttcatacaaccttcatcaatcttca 476  Q
    ||||||||||| ||||||||||||||    
T  1007 cttcatacaacattcatcaatcttca 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 266 - 456
Target Start/End: Original strand, 608 - 799
Alignment:
Q  266 ttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacactcnnnnnnnggag 365  Q
    |||||||| |||  ||||||||||||||||||||| ||||| || |||||||||||||||||||||| |||| ||| |||||||            ||||    
T  608 ttggtcccttaatcattaaacgtttcaatttggtcctttatattgtttccatcattcaatttggtcctatttaatcaattttaatgggttaaaaaaggag 707  T
Q  366 atcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 456  Q
    | |||||||||||| |  | ||||| |||||||| | ||||||||||||| || || ||||| ||||||||||||| |||| | ||||||||    
T  708 accgttggataaataaagtatatcagatctaactgtatatcaccaacatcaaatttgttttacttttcttcatctttttccctaatcttcat 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 85179 - 85117
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| | ||||||| |||||||||| |||||||||||||||    
T  85179 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtc 85117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 77297 - 77222
Alignment:
Q  225 aatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||| ||||||||||| |||||||||||||  ||||||| ||||||| ||||||||| || |||||||||||||||    
T  77297 aatacatcatttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtc 77222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 23403 - 23481
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||| | |||||||||||||||||  ||||||| ||||||||||||||||| ||| || |||||||||||    
T  23403 cttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtc 23481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 24934 - 24856
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||| ||| ||||||||| |||||||  ||||||| ||||||||||||| ||| ||  ||||||||||||||    
T  24934 cttaatacatcgtttggtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtc 24856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 73105 - 73049
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaac 278  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  73105 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaac 73049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 96157 - 96216
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  96157 cttaatacatcatttggtccattaacttattttcgattttcaatttggtcccctaactat 96216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 96934 - 96856
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| |||||||  ||||||||||||||||  |||||||||||| ||||||||| || ||  || |||||||||||    
T  96934 cttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccctaacaataaactgtctcaatttggtc 96856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 205655 - 205593
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||| | || ||| ||||||||| ||| ||||||||||||||||||||||    
T  205655 gtcccttaacttattttaatttctcagtttggtcccttaattattaaacgtttcaatttggtc 205593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1337 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1337
Description:

Target: scaffold1337; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 420
Target Start/End: Original strand, 282 - 428
Alignment:
Q  275 taactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaa-cactcnnnnnnnggagatcgttgg 373  Q
    ||||||| ||||| ||||||||| || ||| |||| |||||||||||||||||||||| |||| ||  ||||||| | ||         | || ||||||    
T  282 taactatcaaacgcttcaatttgatcctttttcttgtttccatcattcaatttggtcctatttcattaattttaatctcttaaaaaaatgtgaccgttgg 381  T
Q  374 ataaatgagatctatcaaatctaactatgtatcaccaacatctaatt 420  Q
    ||||||||||||| ||| |||||||  ||||||||||||| ||||||    
T  382 ataaatgagatctgtcatatctaaccgtgtatcaccaacacctaatt 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 23869 - 23950
Alignment:
Q  363 gagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttctt 443  Q
    |||||||| | ||||| ||| || |||||||||||| ||||||||||| ||||||| ||||||||  |||||||||||||||    
T  23869 gagatcgtagaataaaagagttccatcaaatctaacaatgtatcaccatcatctaatttattttacatttcttcatcttctt 23950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 747 - 688
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  747 cttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactat 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 527 - 586
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  527 cttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactat 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 9597 - 9538
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| ||||||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  9597 cttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactat 9538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 8384 - 8435
Alignment:
Q  230 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 281  Q
    ||||||| |||||||||||||||||  ||||||| |||| ||||||||||||    
T  8384 atcatttggtcccttaacttatttttggttttcactttgctcccctaactat 8435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 2368 - 2306
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||  ||||||| ||||||||||||| ||| ||  ||||||||||||||    
T  2368 gtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtc 2306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 56819 - 56741
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||||||| ||| ||  || |||||||||||    
T  56819 cttaataaatcatttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtc 56741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 634 - 557
Alignment:
Q  222 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 299  Q
    ||||||| |||||||  ||| ||||||||||||  |||||||||| |||||||||||||| ||  || ||||||||||    
T  634 cttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggt 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 13306 - 13249
Alignment:
Q  239 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 296  Q
    ||||||||||||||||  ||||||| ||||||||||||||||| ||| || |||||||    
T  13306 tcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaattt 13249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 11705 - 11781
Alignment:
Q  224 taatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||| ||| ||| |||||||||||||||||   |||||| ||| ||||||||| ||| ||  ||||||||||||||    
T  11705 taatacatcgtttggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtc 11781  T

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Target: scaffold0141 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 456
Target Start/End: Complemental strand, 35222 - 35167
Alignment:
Q  401 tgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||||||||||| |||||| ||||  |||| |||||||||||||| |||||||||    
T  35222 tgtatcaccaacacctaattttttttgttttattcatcttcttcctccatcttcat 35167  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 456
Target Start/End: Original strand, 79590 - 79645
Alignment:
Q  401 tgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcat 456  Q
    ||||||||||||| |||||| ||||  |||| |||||||||||||| |||||||||    
T  79590 tgtatcaccaacacctaattttttttgttttattcatcttcttcctccatcttcat 79645  T

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Target: scaffold0177 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 1768 - 1830
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    |||||||||||||||||| | ||||| ||||||||||||| ||| ||  || |||||||||||    
T  1768 gtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtc 1830  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 548
Target Start/End: Complemental strand, 29082 - 29032
Alignment:
Q  498 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaat 548  Q
    |||||| ||| |||||||||||||||||| |||| |||||||| |||||||    
T  29082 aaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaat 29032  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 25935 - 25997
Alignment:
Q  238 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 300  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||  || |||||||||||    
T  25935 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 25997  T

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