View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12540_low_11 (Length: 321)

Name: NF12540_low_11
Description: NF12540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12540_low_11
NF12540_low_11
[»] chr8 (18 HSPs)
chr8 (1-303)||(22374028-22374330)
chr8 (1-306)||(21928587-21928892)
chr8 (1-295)||(19985339-19985633)
chr8 (1-299)||(20391245-20391543)
chr8 (1-309)||(31413846-31414154)
chr8 (1-309)||(22027594-22027902)
chr8 (1-309)||(22054022-22054330)
chr8 (1-295)||(16268552-16268846)
chr8 (35-308)||(6606784-6607057)
chr8 (142-295)||(28984211-28984364)
chr8 (1-299)||(29300750-29301048)
chr8 (32-114)||(21982451-21982533)
chr8 (32-114)||(21998937-21999019)
chr8 (1-63)||(28984070-28984132)
chr8 (1-63)||(28989289-28989351)
chr8 (251-297)||(22523919-22523965)
chr8 (213-270)||(21163883-21163940)
chr8 (248-305)||(22990451-22990508)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-306)||(176109-176414)
scaffold0020 (1-297)||(98469-98765)
[»] chr4 (21 HSPs)
chr4 (1-306)||(15073452-15073757)
chr4 (1-309)||(14993238-14993546)
chr4 (4-299)||(16150732-16151027)
chr4 (4-299)||(16154878-16155173)
chr4 (1-299)||(20893124-20893422)
chr4 (142-297)||(18259675-18259830)
chr4 (1-297)||(15266869-15267165)
chr4 (142-295)||(29450422-29450575)
chr4 (1-293)||(44658753-44659045)
chr4 (35-308)||(13879236-13879509)
chr4 (1-295)||(3261679-3261973)
chr4 (69-310)||(8708838-8709079)
chr4 (167-299)||(27903644-27903776)
chr4 (1-309)||(51603663-51603971)
chr4 (1-309)||(53750341-53750649)
chr4 (1-299)||(11204113-11204411)
chr4 (1-295)||(7357360-7357654)
chr4 (1-57)||(29450660-29450716)
chr4 (213-295)||(15661-15743)
chr4 (212-309)||(13513654-13513751)
chr4 (213-309)||(14697406-14697502)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-309)||(29649-29957)
[»] chr3 (39 HSPs)
chr3 (1-302)||(12857602-12857902)
chr3 (1-306)||(14290634-14290939)
chr3 (3-306)||(35982905-35983208)
chr3 (1-305)||(16825382-16825686)
chr3 (1-310)||(15230325-15230634)
chr3 (1-310)||(15236193-15236502)
chr3 (1-305)||(12357630-12357934)
chr3 (1-306)||(18131449-18131754)
chr3 (1-299)||(31941625-31941923)
chr3 (152-297)||(17494520-17494664)
chr3 (1-309)||(16831627-16831935)
chr3 (144-297)||(12181209-12181362)
chr3 (1-309)||(17189096-17189404)
chr3 (110-309)||(16384471-16384670)
chr3 (72-306)||(2037014-2037248)
chr3 (72-306)||(2040755-2040989)
chr3 (72-306)||(14039539-14039773)
chr3 (1-295)||(28757041-28757335)
chr3 (1-299)||(31692294-31692592)
chr3 (142-306)||(11958283-11958447)
chr3 (113-309)||(24190138-24190334)
chr3 (35-308)||(15008684-15008954)
chr3 (142-295)||(47126807-47126960)
chr3 (105-297)||(13317680-13317872)
chr3 (1-309)||(13944746-13945054)
chr3 (1-299)||(16326816-16327116)
chr3 (110-309)||(8744489-8744688)
chr3 (142-295)||(10408831-10408984)
chr3 (32-127)||(2247135-2247230)
chr3 (213-306)||(12843216-12843309)
chr3 (1-63)||(10408690-10408752)
chr3 (1-63)||(47126666-47126728)
chr3 (44-103)||(13028661-13028720)
chr3 (248-299)||(15262589-15262640)
chr3 (143-201)||(11949132-11949190)
chr3 (1-63)||(13317879-13317941)
chr3 (1-83)||(11958506-11958588)
chr3 (1-63)||(12181066-12181128)
chr3 (1-57)||(16378285-16378341)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-306)||(43296-43601)
[»] chr6 (20 HSPs)
chr6 (1-309)||(21474557-21474865)
chr6 (1-306)||(25770801-25771106)
chr6 (1-310)||(19486309-19486618)
chr6 (142-300)||(19456121-19456279)
chr6 (142-300)||(19466266-19466424)
chr6 (149-306)||(24515433-24515590)
chr6 (72-306)||(16813668-16813902)
chr6 (142-309)||(10465864-10466031)
chr6 (1-299)||(14376942-14377240)
chr6 (1-309)||(18797647-18797955)
chr6 (134-297)||(19438092-19438255)
chr6 (1-295)||(24367357-24367651)
chr6 (137-299)||(8720731-8720893)
chr6 (1-302)||(21567014-21567315)
chr6 (213-297)||(23081592-23081676)
chr6 (214-308)||(25958770-25958864)
chr6 (167-306)||(15462459-15462598)
chr6 (212-299)||(30678050-30678137)
chr6 (212-258)||(21764980-21765026)
chr6 (213-257)||(18405012-18405056)
[»] scaffold0865 (1 HSPs)
scaffold0865 (1-309)||(1146-1454)
[»] scaffold0133 (1 HSPs)
scaffold0133 (1-309)||(28159-28467)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-306)||(51773-52078)
[»] chr1 (18 HSPs)
chr1 (1-309)||(21742495-21742803)
chr1 (1-309)||(21738979-21739287)
chr1 (1-297)||(22015700-22015996)
chr1 (1-299)||(24096568-24096866)
chr1 (143-309)||(19857555-19857721)
chr1 (145-309)||(20832843-20833007)
chr1 (1-299)||(21961166-21961464)
chr1 (142-299)||(52989021-52989178)
chr1 (1-295)||(37680188-37680482)
chr1 (1-295)||(48426012-48426306)
chr1 (142-295)||(38909783-38909936)
chr1 (212-308)||(18273117-18273213)
chr1 (1-295)||(20074666-20074960)
chr1 (142-295)||(20297663-20297816)
chr1 (142-309)||(31536940-31537107)
chr1 (1-60)||(52988880-52988939)
chr1 (1-63)||(31537186-31537248)
chr1 (1-63)||(38910015-38910077)
[»] scaffold1056 (1 HSPs)
scaffold1056 (1-306)||(1843-2147)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-306)||(70230-70535)
[»] scaffold0405 (1 HSPs)
scaffold0405 (1-300)||(5724-6023)
[»] scaffold0751 (1 HSPs)
scaffold0751 (1-309)||(5303-5610)
[»] scaffold0053 (2 HSPs)
scaffold0053 (5-309)||(62646-62950)
scaffold0053 (1-270)||(65211-65480)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-299)||(4188-4486)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-298)||(50227-50524)
[»] scaffold0523 (2 HSPs)
scaffold0523 (1-309)||(5562-5870)
scaffold0523 (1-295)||(11631-11925)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-309)||(63393-63701)
[»] scaffold0266 (1 HSPs)
scaffold0266 (3-309)||(16761-17067)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-299)||(42820-43118)
[»] chr7 (27 HSPs)
chr7 (1-309)||(19150094-19150402)
chr7 (1-309)||(20749493-20749801)
chr7 (1-309)||(12798362-12798667)
chr7 (1-305)||(14261108-14261412)
chr7 (1-299)||(12203668-12203966)
chr7 (4-297)||(15099473-15099766)
chr7 (1-309)||(14283232-14283540)
chr7 (1-309)||(16947330-16947638)
chr7 (143-299)||(13676676-13676832)
chr7 (1-302)||(11385294-11385595)
chr7 (1-295)||(21755495-21755789)
chr7 (142-309)||(12459852-12460019)
chr7 (1-295)||(26115462-26115756)
chr7 (1-295)||(26091670-26091964)
chr7 (142-295)||(40924689-40924842)
chr7 (1-310)||(13024427-13024736)
chr7 (1-309)||(18050811-18051119)
chr7 (1-288)||(49155384-49155671)
chr7 (1-295)||(13965540-13965834)
chr7 (134-309)||(14144877-14145052)
chr7 (34-127)||(15114317-15114410)
chr7 (14-116)||(15627619-15627721)
chr7 (1-57)||(40924927-40924983)
chr7 (136-302)||(12712528-12712694)
chr7 (1-63)||(14140762-14140824)
chr7 (212-309)||(9591657-9591754)
chr7 (1-54)||(15343514-15343567)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-297)||(34459-34755)
[»] scaffold0067 (4 HSPs)
scaffold0067 (1-309)||(64476-64784)
scaffold0067 (1-309)||(49054-49362)
scaffold0067 (1-309)||(58088-58396)
scaffold0067 (1-297)||(29746-30042)
[»] scaffold0165 (2 HSPs)
scaffold0165 (1-220)||(12082-12301)
scaffold0165 (261-306)||(12326-12371)
[»] scaffold0309 (1 HSPs)
scaffold0309 (5-231)||(12853-13079)
[»] chr5 (21 HSPs)
chr5 (1-293)||(23563237-23563529)
chr5 (1-310)||(21983229-21983538)
chr5 (1-299)||(21561088-21561386)
chr5 (32-308)||(23669670-23669946)
chr5 (1-299)||(23077968-23078266)
chr5 (72-306)||(16258092-16258326)
chr5 (203-309)||(21870331-21870437)
chr5 (203-309)||(21874611-21874717)
chr5 (72-306)||(22591811-22592045)
chr5 (72-306)||(22595366-22595600)
chr5 (105-309)||(17266387-17266591)
chr5 (207-299)||(22505892-22505984)
chr5 (1-295)||(20345289-20345583)
chr5 (142-295)||(14884058-14884211)
chr5 (1-295)||(25851079-25851373)
chr5 (14-116)||(21631645-21631747)
chr5 (35-308)||(43122508-43122781)
chr5 (1-63)||(14884290-14884352)
chr5 (213-297)||(26735793-26735877)
chr5 (1-60)||(22505686-22505745)
chr5 (213-270)||(23526288-23526345)
[»] scaffold1433 (1 HSPs)
scaffold1433 (1-306)||(1188-1493)
[»] scaffold0404 (1 HSPs)
scaffold0404 (1-306)||(7866-8171)
[»] scaffold2062 (2 HSPs)
scaffold2062 (137-309)||(746-918)
scaffold2062 (1-63)||(997-1059)
[»] scaffold0585 (2 HSPs)
scaffold0585 (1-273)||(3999-4271)
scaffold0585 (268-305)||(738-775)
[»] scaffold0011 (1 HSPs)
scaffold0011 (142-309)||(153755-153922)
[»] scaffold0664 (1 HSPs)
scaffold0664 (1-309)||(7160-7468)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-297)||(769-1065)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-309)||(39207-39515)
[»] chr2 (11 HSPs)
chr2 (1-309)||(19716428-19716736)
chr2 (1-309)||(19720991-19721299)
chr2 (35-308)||(28350633-28350906)
chr2 (143-297)||(23274459-23274613)
chr2 (1-302)||(23097436-23097737)
chr2 (1-309)||(12577077-12577385)
chr2 (106-306)||(21901366-21901566)
chr2 (1-123)||(23113447-23113568)
chr2 (1-277)||(20848313-20848588)
chr2 (212-258)||(11351173-11351219)
chr2 (212-258)||(22462943-22462989)
[»] scaffold0035 (1 HSPs)
scaffold0035 (142-297)||(6068-6223)
[»] scaffold1032 (1 HSPs)
scaffold1032 (1-310)||(688-997)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-309)||(325829-326136)
scaffold0004 (143-309)||(319507-319673)
scaffold0004 (1-299)||(200361-200650)
[»] scaffold0509 (1 HSPs)
scaffold0509 (3-265)||(11952-12214)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-299)||(3776-4074)
[»] scaffold0017 (1 HSPs)
scaffold0017 (135-297)||(4339-4501)
[»] scaffold0317 (1 HSPs)
scaffold0317 (143-299)||(2895-3051)
[»] scaffold0034 (3 HSPs)
scaffold0034 (137-309)||(11780-11952)
scaffold0034 (143-306)||(1829-1992)
scaffold0034 (212-299)||(70705-70792)
[»] scaffold0706 (1 HSPs)
scaffold0706 (143-309)||(5083-5249)
[»] scaffold0310 (1 HSPs)
scaffold0310 (1-299)||(11099-11397)
[»] scaffold0146 (1 HSPs)
scaffold0146 (23-297)||(170-444)
[»] scaffold0222 (2 HSPs)
scaffold0222 (1-309)||(361-669)
scaffold0222 (143-306)||(21078-21241)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-309)||(37061-37369)
[»] scaffold0367 (1 HSPs)
scaffold0367 (143-309)||(8895-9061)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-303)||(22244-22546)
[»] scaffold0434 (1 HSPs)
scaffold0434 (197-309)||(5776-5888)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-309)||(8336-8644)
scaffold0235 (1-309)||(18550-18858)
[»] scaffold0031 (1 HSPs)
scaffold0031 (189-305)||(115934-116050)
[»] scaffold0348 (3 HSPs)
scaffold0348 (134-309)||(4723-4898)
scaffold0348 (134-303)||(17364-17533)
scaffold0348 (1-53)||(17614-17666)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-299)||(164285-164583)
scaffold0023 (213-270)||(30487-30544)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-310)||(8736-9045)
[»] scaffold0009 (1 HSPs)
scaffold0009 (142-299)||(251882-252039)
[»] scaffold0151 (1 HSPs)
scaffold0151 (150-297)||(428-575)
[»] scaffold1517 (1 HSPs)
scaffold1517 (1-299)||(1371-1669)
[»] scaffold0609 (2 HSPs)
scaffold0609 (35-308)||(1095-1368)
scaffold0609 (233-308)||(7911-7986)
[»] scaffold0167 (1 HSPs)
scaffold0167 (143-299)||(5317-5473)
[»] scaffold1426 (2 HSPs)
scaffold1426 (142-295)||(1495-1648)
scaffold1426 (1-60)||(1730-1789)
[»] scaffold0276 (1 HSPs)
scaffold0276 (142-295)||(23811-23964)
[»] scaffold0243 (1 HSPs)
scaffold0243 (143-299)||(9656-9812)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-309)||(40180-40488)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-300)||(428-727)
[»] scaffold1530 (1 HSPs)
scaffold1530 (176-309)||(801-934)
[»] scaffold0188 (1 HSPs)
scaffold0188 (218-299)||(33256-33337)
[»] scaffold0041 (2 HSPs)
scaffold0041 (142-295)||(41998-42151)
scaffold0041 (1-57)||(41857-41913)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-309)||(53297-53605)
[»] scaffold0005 (1 HSPs)
scaffold0005 (145-309)||(263492-263656)
[»] scaffold0003 (1 HSPs)
scaffold0003 (145-309)||(203647-203811)
[»] scaffold0074 (1 HSPs)
scaffold0074 (134-297)||(15327-15490)
[»] scaffold1299 (1 HSPs)
scaffold1299 (1-302)||(1729-2030)
[»] scaffold0118 (2 HSPs)
scaffold0118 (142-295)||(724-877)
scaffold0118 (1-60)||(583-642)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-310)||(54169-54478)
[»] scaffold0001 (3 HSPs)
scaffold0001 (162-299)||(514237-514374)
scaffold0001 (1-60)||(514476-514535)
scaffold0001 (74-153)||(168131-168210)
[»] scaffold0203 (1 HSPs)
scaffold0203 (1-273)||(764-1036)
[»] scaffold0765 (2 HSPs)
scaffold0765 (170-309)||(6131-6270)
scaffold0765 (1-67)||(6373-6439)
[»] scaffold0239 (1 HSPs)
scaffold0239 (134-309)||(9661-9836)
[»] scaffold0190 (1 HSPs)
scaffold0190 (152-299)||(30210-30357)
[»] scaffold2165 (1 HSPs)
scaffold2165 (142-299)||(687-844)
[»] scaffold0679 (1 HSPs)
scaffold0679 (33-127)||(1079-1173)
[»] scaffold0490 (1 HSPs)
scaffold0490 (236-309)||(3222-3295)
[»] scaffold1845 (1 HSPs)
scaffold1845 (207-299)||(1188-1280)
[»] scaffold0529 (1 HSPs)
scaffold0529 (32-116)||(5241-5325)
[»] scaffold0708 (1 HSPs)
scaffold0708 (1-310)||(5018-5327)
[»] scaffold0261 (2 HSPs)
scaffold0261 (142-309)||(12288-12453)
scaffold0261 (142-309)||(20468-20633)
[»] scaffold0068 (1 HSPs)
scaffold0068 (162-299)||(66992-67129)
[»] scaffold0100 (2 HSPs)
scaffold0100 (1-116)||(16676-16791)
scaffold0100 (213-299)||(16493-16579)
[»] scaffold0443 (2 HSPs)
scaffold0443 (1-63)||(11931-11993)
scaffold0443 (142-258)||(12060-12176)
[»] scaffold0029 (2 HSPs)
scaffold0029 (136-302)||(115819-115985)
scaffold0029 (1-51)||(94026-94076)
[»] scaffold0270 (2 HSPs)
scaffold0270 (213-309)||(7207-7303)
scaffold0270 (213-309)||(14337-14433)
[»] scaffold0161 (1 HSPs)
scaffold0161 (212-296)||(36161-36245)
[»] scaffold0180 (1 HSPs)
scaffold0180 (188-299)||(30897-31008)
[»] scaffold0550 (1 HSPs)
scaffold0550 (212-270)||(10071-10129)
[»] scaffold0077 (1 HSPs)
scaffold0077 (251-309)||(57488-57546)
[»] scaffold0044 (1 HSPs)
scaffold0044 (212-258)||(17493-17539)
[»] scaffold0040 (1 HSPs)
scaffold0040 (213-310)||(110780-110877)
[»] scaffold0006 (1 HSPs)
scaffold0006 (214-306)||(104561-104653)
[»] scaffold0098 (1 HSPs)
scaffold0098 (44-127)||(25637-25720)
[»] scaffold2059 (1 HSPs)
scaffold2059 (212-294)||(658-740)
[»] scaffold0848 (1 HSPs)
scaffold0848 (32-114)||(5068-5150)
[»] scaffold0447 (1 HSPs)
scaffold0447 (251-297)||(1750-1796)
[»] scaffold0383 (1 HSPs)
scaffold0383 (251-297)||(4614-4660)
[»] scaffold0289 (1 HSPs)
scaffold0289 (212-258)||(121-167)
[»] scaffold0207 (1 HSPs)
scaffold0207 (213-295)||(4443-4525)
[»] scaffold0177 (2 HSPs)
scaffold0177 (212-270)||(11269-11327)
scaffold0177 (212-270)||(14954-15012)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-63)||(30056-30118)
[»] scaffold0075 (2 HSPs)
scaffold0075 (213-295)||(48064-48146)
scaffold0075 (213-295)||(55359-55441)
[»] scaffold0819 (1 HSPs)
scaffold0819 (212-269)||(447-504)
[»] scaffold0282 (1 HSPs)
scaffold0282 (213-309)||(13348-13444)


Alignment Details
Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 22374028 - 22374330
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374028 acctctgataagtcggtcctcattaacagtttgggtaccagtcaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 22374127  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||||||||||||||||||| |||  | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  22374128 atatgaccttcttcatcacaattatagcaaacaatatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcat 22374227  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||    
T  22374228 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcagtaggagaatctctcctcctaggcctcctctcctcattaag 22374327  T
Q  301 tct 303  Q
    |||    
T  22374328 tct 22374330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 21928587 - 21928892
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||| ||||| ||||||||| ||| || ||||||||||||||||||||||||  || ||||||| |||||| |||| || ||||||    
T  21928587 acctctgataagtcggtcttcattcacagtttgcttactagtcaaagcaaacaccttgccacctgtccgaaccttcttgggcttcttgcattgtgagcta 21928686  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||||||||||||| ||| |||||||| ||||||||||||| | || |||||||||||||||||||| || ||||||||||||||||    
T  21928687 atatgcccctcttcatcacaattatagcaaacgacatcaccacgcttgcaatcacccaaagtgtgtcctttctgtccacatctgaaacacttcttctcat 21928786  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | ||||||| ||||||||||| |||| | ||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21928787 ctcggtcacttacattactctcgtggcccttttcgccacacttgaaacaaagaatctcagtaggagcatctctcctcctaggcctcctctcatcattcag 21928886  T
Q  301 tctctg 306  Q
     |||||    
T  21928887 cctctg 21928892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 19985339 - 19985633
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||| ||| ||||| ||||||| || ||| ||||| ||||||||||||||  || |||||||||||||| ||||||| ||||||    
T  19985339 acctctgataagtcggtccttattcacagtctgcgtactagtcaatgcaaataccttgccacctgtccgaaccttcttaggcttcttgcactgtgagcta 19985438  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||||||||||||| |||  ||||| | || ||||||||||||||||||||||| |||||||||||| || ||| ||||||||||||    
T  19985439 atatgcccctcttcatcacaattatagcaaacaacatccccactcttgcaatcagctaatgtgtgtcatttctgtccacatctgaaatacttcttctcat 19985538  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||    
T  19985539 cacggtcacatacattactcttgtggcttttttcgccacacttgaaacaaacaatctcagtaggagcatctctcctcttaggcctcctctcatca 19985633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 20391245 - 20391543
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||| || |||||||||| ||| ||||||||||| ||||||||  |||||||||||||||||||||||||||| |||    
T  20391245 acctctgataagtcggtcctcattaactgtctgcgtaccagtcaatgcaaacacctttccacctgtctgagccttcttaggcttcctgcactgcgaacta 20391344  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    | | |||||||||| ||||||||  || |||  | ||||| ||||||||| || ||||  || || |||||||  ||||| |  || ||||| |||||||    
T  20391345 agatgaccttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattccgctatagtatgccctttcttcccacatcggaagcactttttctcat 20391444  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||  |   | ||||||||||||||| | || |||||||||||| | || |||||||||  |||| ||||||| ||| |||| ||||||||||||||||    
T  20391445 caccattggaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagaaggaacatctctactcttaggtctcctctcatcattca 20391543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 31414154 - 31413846
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| ||| |||||| ||| |||||||| || ||||| |||  ||||||||| | ||   | ||||| || ||     
T  31414154 acctctgataagtcggtcctcattagtagtctgcataccagtcaatgcaaacactttcccaccggttctagccttcttcgactgagtacactgtgaactg 31414055  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||||| |  || || ||| |||  |  || | |||||| || ||||||| ||||||||||||||| |||||||||||||||||| ||||||    
T  31414054 atatgaccttcttcgttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcat 31413955  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |   ||||  |||| ||||| ||| |||||||||||||||||||||| ||||| |||| |||||||||||||||| | |||||||||||||||||||     
T  31413954 ctctaccacaagcattgctcttatggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcat 31413855  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  31413854 tctctgctt 31413846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 22027902 - 22027594
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| |||||||| | ||| |||||||| || ||||| |||  | ||||||| ||||   ||||||| || ||     
T  22027902 acctctgataagtcggtcctcattagtagtctgcgtaccggtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtgcactgagaactg 22027803  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||   | |||||| |||  || || |  | ||| ||||||||||||||||| || ||||| |||||||| || |||||||||||||    
T  22027802 atatggccctcttcattgtagttatagcaaacaacgtctcccctcttacaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcat 22027703  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| ||||||||||||||| |||| || ||||||||| |||| || ||||||  |||||||||||||||  | |||||||||||||||||||     
T  22027702 ctttggtacaaacattactcttgtggcctttatcgccacacttgtaacaaactatctcagcaggagcatctctcctattgggcctcctctcatcattcaa 22027603  T
Q  301 tctctgctt 309  Q
    ||| |||||    
T  22027602 tctttgctt 22027594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 22054022 - 22054330
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||| ||||||||||||  ||| |||||||||| |||||||||||| || ||||| |||  | ||||||| ||||   ||||||| |  ||     
T  22054022 acctctgataagacggtcctcattagtagtctgcgtaccagtcaaagcaaacacttttccaccagttctatccttcttcggctgtgtgcactgtgtactg 22054121  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || ||||| |  || |||||  | |  ||||||| |||||||||||| |||||   ||| || ||||| ||||| || || |||||||||||||    
T  22054122 atatggccctcttcgttgcagttataacatacaacatcaccacgcttgcaatccgctaaaaggtgacccttctgaccacatctgaagcacttcttctcat 22054221  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| ||||||||||||||| |||| || |||||||| ||||| || ||||||  || ||||||||||||  | ||||||||||||||||| ||    
T  22054222 ccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcagaagcatctctcctattcggcctcctctcatcattaag 22054321  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  22054322 tctctgctt 22054330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 16268846 - 16268552
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| |||||||||| |||||||||||| || ||||| |||  ||||||||| ||||     ||||| || ||     
T  16268846 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaaagcaaacacttttccaccagttctagccttcttcggctcaggacactgtgaactg 16268747  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||| |||  ||||| ||| | |  | ||| | ||||||||| |||||||   | || || ||||| |||||||| || |||||| ||||||    
T  16268746 atatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattcagctaggctatgacccttctgaccacacctgaagcacttcctctcat 16268647  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |     |||| ||||||||||||||| |||| |||||||||||| |||| |||||||||  ||||||||||||| || |||||||||| ||||||    
T  16268646 ctttaccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcttcttaggcctcctgtcatca 16268552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 35 - 308
Target Start/End: Complemental strand, 6607057 - 6606784
Alignment:
Q  35 gtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatga 134  Q
    |||||||| |||||||||||||||||||||||   | ||||||||||||   | ||||| || || | | | |||||||||||||||||  || |||  |    
T  6607057 gtaccagctaaagcaaacaccttgccacctgtcctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcatcacaattgaagcaaacaa 6606958  T
Q  135 catcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttc 234  Q
     ||| | ||||||||| |||||||  || || || |||| |||||| |  || ||||||||||| ||||  |  || ||||||||||||||| | || ||    
T  6606957 tatccccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctc 6606858  T
Q  235 accacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgct 308  Q
    |||||||||| | || ||||||||| ||||| ||||||| ||| |||| |||||||||||||||| ||| ||||    
T  6606857 accacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 6606784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 295
Target Start/End: Original strand, 28984211 - 28984364
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||| |   |||| ||||||||||||||| |||| |||||||||    
T  28984211 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacac 28984310  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| |||| ||||||||||  ||||||||||||||| | |||||||| ||||||    
T  28984311 ttgtaacaaacaatctcaactggagcatctctcctcttgggcctcctatcatca 28984364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 29301048 - 29300750
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| |||||||| | ||| | |||||| || |||||  |   ||||||||| ||||   | ||||| || ||     
T  29301048 acctctgataagtcggtcctcatttgtagtctgcgtacccgtcaatgaaaacactttcccaccgatcctagccttcttcggctgagtacactgagaactg 29300949  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||||||||  || |||||| | |  |  || | |||||| || ||||||| |||||||||| |||| |||||||||||||||||| | ||||    
T  29300948 atatgaccttcttcattgcagttatagtagacaatgtccccacgcttacattcagctagtgtgtgtcctctctgaccacacctaaaacacttcctttcat 29300849  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    | |   ||||  |||| ||||||||| || ||||||||||||| ||||| ||||| |||   ||| |||||| |||| | |||||||| ||||||||||    
T  29300848 ctctaccacaagcattgctcttgtggcctctttcaccacacttaaaacaaacaatttcagcgggaacatctcccctcttgggcctcctatcatcattca 29300750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 21982533 - 21982451
Alignment:
Q  32 tgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttc 114  Q
    |||||||||| ||||||||| |||||  |||| ||  | ||||||||||||||| |||||||||| |||||| ||||||||||    
T  21982533 tgcgtaccagtcaaagcaaaaaccttcacaccagtctgggccttcttaggcttcttgcactgcgaactaatatgaccttcttc 21982451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 21999019 - 21998937
Alignment:
Q  32 tgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttc 114  Q
    |||||||||| ||||||||| |||||  |||| ||  | ||||||||||||||| |||||||||| |||||| ||||||||||    
T  21999019 tgcgtaccagtcaaagcaaaaaccttcacaccagtctgggccttcttaggcttcttgcactgcgaactaatatgaccttcttc 21998937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28984070 - 28984132
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    |||||||||||||||||||||||||  ||| || ||||||| || |||||||||||| |||||    
T  28984070 acctctgataagtcggtcctcattaggagtctgtgtaccagtcagagcaaacacctttccacc 28984132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28989289 - 28989351
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    |||||||||||||||||||||||||  ||| || ||||||| || |||||||||||| |||||    
T  28989289 acctctgataagtcggtcctcattaggagtctgtgtaccagtcagagcaaacacctttccacc 28989351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 22523919 - 22523965
Alignment:
Q  251 acaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    |||||||||| |||||||||| || ||||||||| ||||||||||||    
T  22523919 acaatctcaacaggagcatctttcttcctaggccgcctctcatcatt 22523965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 21163940 - 21163883
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatc 270  Q
    |||| |||||||||||||| || ||||| || |||||||||||||||  |||||||||    
T  21163940 cattgctcttgtggtctttctcgccacaattaaaacagacaatctcagcaggagcatc 21163883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 22990451 - 22990508
Alignment:
Q  248 cagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctct 305  Q
    ||||||||||||| |||||| ||| || ||||||||| |||||||||| ||| |||||    
T  22990451 cagacaatctcaacaggagcgtctttcttcctaggccgcctctcatcaatcattctct 22990508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 176109 - 176414
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  176109 acctctgataagtcggtctttattaacagtttgcgtaccagtcaaagcaaacaccttgccacctgtcagagccttctaaagcttcctgcactgcgagcta 176208  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  176209 atatgaccttcttcatcacaattatagcaaacaacatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcat 176308  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  176309 cacggtcacatacattactcttgtggcctttttcaccacacttgaaacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattcag 176408  T
Q  301 tctctg 306  Q
    ||||||    
T  176409 tctctg 176414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 98765 - 98469
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||| ||||||||||||||||| ||   ||||| ||||||| || |||||||||||| ||||| ||   | ||||||| ||||   |||||||||| ||     
T  98765 acctttgataagtcggtcctcactagtggtttgtgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgtgtgcactgcgaactg 98666  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || ||||| |  || |||||  | |  ||||||| |||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||    
T  98665 atatggccctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcat 98566  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    |      ||| ||||||||||||||| |||| || ||||||||| |||| || ||||||  |||||||||||||| | | |||||||||||||||||    
T  98565 ctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctccacttgggcctcctctcatcatt 98469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 15073452 - 15073757
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||     
T  15073452 acctctgataagtcggtcctcattaacagtttgtgtaccagtcaaagaaaacaccttgccacctgtcagagccttcttaggcttcctgcactgtgagctt 15073551  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||||||||||||||||||| |||  ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15073552 atatgaccttcttcatcacaattatagcaaacaacatcacaaagcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcat 15073651  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15073652 cacggtcacatacattactcttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcag 15073751  T
Q  301 tctctg 306  Q
    ||||||    
T  15073752 tctctg 15073757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 14993546 - 14993238
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||  ||||||||||||||||||||||||   | |||||||||| | | | |||||||| ||     
T  14993546 acctctgataagtcggtcctcattcactgtttgcgtaccattcaaagcaaacaccttgccacctgtcctaaccttcttaggttgcgtacactgcgaactg 14993447  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  || || ||| |||  ||||| | | |||||||||||||||| |||||||||||||| |||||||| || ||||||||||  |    
T  14993446 atatgaccttcctcattgcagttgtagcaaacaacatccccatgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttcttct 14993347  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||| ||||||||||||||||| | |||||||||||||||||||     
T  14993346 cacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaa 14993247  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  14993246 tctctgctt 14993238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 299
Target Start/End: Original strand, 16150732 - 16151027
Alignment:
Q  4 tctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaata 103  Q
    |||||||||||| |||||| ||   || | |||||||| ||| |||||||| || ||||| |||  | ||||||| || ||| |||| ||||||||||||    
T  16150732 tctgataagtcgatcctcactagtggtctacgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttcttgcattgcgagctaata 16150831  T
Q  104 agaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcac 203  Q
     | || ||||||||||| |||||| |||  ||||||| ||||||||||||||||| ||||||||||||||| |||||||| || ||||||||||||||      
T  16150832 tgcccctcttcatcacagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctt 16150931  T
Q  204 ggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
        ||| ||||||||||||||| |||| || ||||||||  | || ||||| |||| |||||||||||||||| | |||||||||||||||||||    
T  16150932 tagtacaaacattactcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattca 16151027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 299
Target Start/End: Original strand, 16154878 - 16155173
Alignment:
Q  4 tctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaata 103  Q
    |||||||||||| |||||| ||   || | |||||||| ||| |||||||| || ||||| |||  | ||||||| || ||| |||| ||||||||||||    
T  16154878 tctgataagtcgatcctcactagtggtctacgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttcttgcattgcgagctaata 16154977  T
Q  104 agaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcac 203  Q
     | || ||||||||||| |||||| |||  ||||||| ||||||||||||||||| ||||||||||||||| |||||||| || ||||||||||||||      
T  16154978 tgcccctcttcatcacagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctt 16155077  T
Q  204 ggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
        ||| ||||||||||||||| |||| || ||||||||  | || ||||| |||| |||||||||||||||| | |||||||||||||||||||    
T  16155078 tagtacaaacattactcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattca 16155173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 20893124 - 20893422
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||||||||||||||| ||||| |||  | ||||||| ||||   | |||||||| ||     
T  20893124 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctcagtacactgcgaactg 20893223  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||  || || ||| | |  | ||| | ||||||||| ||||||||  ||||||| ||||| |||||||| || |||||| ||||||    
T  20893224 atatgcccctcttcattgcagttgtagtagacaatatccccacgcttgcattcagctaaattgtgtcccttctgaccacacctgaagcacttcctctcat 20893323  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    | |   |||| ||||| ||||||| | ||||||||||||||||| |||| |||||||||  |||||||||||||||| |||||||||| ||||||||||    
T  20893324 ctctaccacaaacattgctcttgttgcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 20893422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 297
Target Start/End: Original strand, 18259675 - 18259830
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| ||||||||||  |||||||||||||| |||||||| || |||||||||||||| |  ||||| ||||||||||||||| ||||||||||||||    
T  18259675 acgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacac 18259774  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    || || || ||||| | | ||||||||||| ||||| | |||||||||||||||||    
T  18259775 ttaaagcaaacaatattagtaggagcatctgtcctcttgggcctcctctcatcatt 18259830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 15266869 - 15267165
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||| ||| ||| ||   ||||||||||  |  |||||||||||||||||||| ||   | ||||||| |||| | | |||| ||| ||     
T  15266869 acctctgataagtctgtcttcactagttgtttgcgtactggttaaagcaaacaccttgccaccggtcctaaccttcttcggctgcgtacactacgaactg 15266968  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||||| |  || |||||| |||  |  || | | |||| ||||||||||  |||||||||||||| |||||||| || |||||||||||||    
T  15266969 atatgaccttcttcgttgcagttatagcaaacaatgtctccatgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcat 15267068  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    | | |||||| ||||||||||| ||| | || ||| |||||||||| || ||||| |   ||||||||||||||||| | |||||||||||||||||    
T  15267069 ctctgtcacaaacattactcttatggcccttctcatcacacttgaagcaaacaatattcgtaggagcatctctcctcttgggcctcctctcatcatt 15267165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 295
Target Start/End: Complemental strand, 29450575 - 29450422
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  |||| || ||||| |||||||| ||||||||| | ||||| |   |||| ||||||||||||||| |||| |||||||||    
T  29450575 acgcttgcattcagctaaactgtgacccttctgaccacacctgaaacacttcctatcatctcctccacaaacattactcttgtggcctttctcaccacac 29450476  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| | || |||||||||| |||||||||||||||| |||||||||| ||||||    
T  29450475 ttgtagcaaacaatctcaacaggagcatctctcctcttaggcctcctatcatca 29450422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 44659045 - 44658753
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctg-cactgcgagct 99  Q
    |||||||||||||||||||||||||  ||| |||||||||  ||||||||||||||| ||||| |||  || |||||| || |||  | ||||| || ||    
T  44659045 acctctgataagtcggtcctcattaggagtctgcgtaccattcaaagcaaacacctttccaccagttctagtcttcttcgg-ttcaggacactgtgaact 44658947  T
Q  100 aataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctca 199  Q
    |||| ||| |||| |||  ||||| ||  | |  | ||| | ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | |||    
T  44658946 aatatgacattctccattgcaattgtaacagacaatatccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatca 44658847  T
Q  200 tcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcat 293  Q
    || |   |||| ||||||||||||||| |||| |||||||||||| | || |||||||||| |||||||||||||||| | |||||||| ||||    
T  44658846 tctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcat 44658753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 35 - 308
Target Start/End: Original strand, 13879236 - 13879509
Alignment:
Q  35 gtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatga 134  Q
    |||||||| |||||||||||| | |||| || | ||| ||||||||||||| | ||||| || || | | |||||||||| ||||||||  || |||  |    
T  13879236 gtaccagctaaagcaaacacccttccacttgcttgagtcttcttaggcttcttacactgtgaactgagatgaccttcttcgtcacaattgaagcaaacaa 13879335  T
Q  135 catcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttc 234  Q
     || || ||||||||| |||||||  || || || |||| |||||| |  || ||||||||||| |||   |  |||||||||||||||||| | || ||    
T  13879336 tatgaccacgcttgcattcagctatcgtatggcccttctttccacatcggaagcacttcttctcctcatcattgcatacattactcttgtggcccttctc 13879435  T
Q  235 accacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgct 308  Q
    |||||||||| |||| ||||||||| ||| | ||||||| ||| |||| |||||||||||||||| ||| ||||    
T  13879436 accacacttgtaacaaacaatctcagtagaaacatctcttctcttaggtctcctctcatcattcaatctttgct 13879509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 3261973 - 3261679
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||| |||||  ||  || |||||| ||||     ||||| || ||     
T  3261973 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactg 3261874  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||  |||  || || ||  | |  |  || | ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||    
T  3261873 atatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcat 3261774  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    | |   |||| ||||||||||||||| |||| |||||||||||| | || |||||||||| |||||||||||||||| | |||||||| ||||||    
T  3261773 ctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 3261679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 310
Target Start/End: Original strand, 8708838 - 8709079
Alignment:
Q  69 gagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcc 168  Q
    ||||||||||||||||| |||||||||| |||| | | |||||||| ||||||||  || |||  | ||||| ||||||||| || ||||  || || ||    
T  8708838 gagccttcttaggcttcttgcactgcgaactaagatggccttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattccgctatcgtatgccc 8708937  T
Q  169 tttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagca 268  Q
    |||||  ||||| |  || |||||||| |||||||  |  || ||||||||||||||| | || |||||||||||| | || |||||||||  |||| ||    
T  8708938 tttcttcccacatcggaagcacttcttttcatcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaaca 8709037  T
Q  269 tctctcctcctaggcctcctctcatcattcagtctctgcttc 310  Q
    ||| | ||| |||| |||||||||||||||| ||| ||||||    
T  8709038 tctattctcttaggtctcctctcatcattcaatctttgcttc 8709079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 299
Target Start/End: Original strand, 27903644 - 27903776
Alignment:
Q  167 cctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggag 266  Q
    |||||||| ||||| || |||||||||||||||||   |   || ||||||||||||||| ||||  ||||||||||| |||| ||||  |||| |||||    
T  27903644 cctttctgaccacatctgaaacacttcttctcatctttggtgcagacattactcttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggag 27903743  T
Q  267 catctctcctcctaggcctcctctcatcattca 299  Q
    ||||||||| |||||||| ||||||||||||||    
T  27903744 catctctccccctaggccgcctctcatcattca 27903776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 51603971 - 51603663
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||| || |||||||||||| |||| || ||||||| ||||||||| || || |||||   |  | ||||||| ||||   ||||||| |  ||     
T  51603971 acctctgatgagacggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactg 51603872  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || ||||||| |||||||||| | |  |||||||  ||||||||||| ||||   |||| || ||||||||||| || ||||||||||||||||    
T  51603871 atgtggccctcttcattacaattatagcacacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcat 51603772  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| || |||||||||||  |||| || |||||||| || || || ||||||  ||||||||| ||| | || ||||||||||||||||| ||    
T  51603771 ccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaag 51603672  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  51603671 tctctgctt 51603663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 53750649 - 53750341
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||| || |||||||||||| |||| || ||||||| ||||||||| || || |||||   |  | ||||||| ||||   ||||||| |  ||     
T  53750649 acctctgatgagacggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactg 53750550  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || ||||||| |||||||||| | |  |||||||  ||||||||||| ||||   |||| || ||||||||||| || ||||||||||||||||    
T  53750549 atgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcat 53750450  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| || |||||||||||  |||| || |||||||| || || || ||||||  ||||||||| ||| | || ||||||||||||||||| ||    
T  53750449 ccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaag 53750350  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  53750349 tctctgctt 53750341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 11204411 - 11204113
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||||||||||||||| ||||| |||  |||||| || ||||     ||||| || ||     
T  11204411 acctctgataagtcggtcctcattggtagtntgcgtaccagtcaaagcaaacaccttcccaccagttctagcctttttcggctcaggacactgtgaactg 11204312  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||| |||  ||||| ||| | |  | ||| | ||||||||| | |||||   |||| || ||||| |||||||| || || ||  | ||||    
T  11204311 atatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattaagctagactgtgacccttctgaccacacctgaagcattttctatcat 11204212  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    | |   |||| ||||| ||||||||| |||| |||||||||||  |||| |||||||||  |||||||||||||||| | || ||||| ||||||||||    
T  11204211 ctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattca 11204113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 7357360 - 7357654
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| || ||||||| ||| ||||||||||| ||||  |||  ||||||||| ||||     ||||| || |||    
T  7357360 acctctgataagtcggtcctcattggtagtctgtgtaccagtcaatgcaaacaccttcccactagttctagccttcttcggctcaggacactgtgaacta 7357459  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||| |||  || || ||| | |  |  || | ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| ||||||    
T  7357460 atatgaccctctccattgcagttgtagcagacaatgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaagcacttcctctcat 7357559  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |     || | ||||| ||||||||| |||| ||||||| |||| |||| |||||||||  |||||||||||||||| | |||||||| ||||||    
T  7357560 ctttaccataaacattgctcttgtggcctttctcaccactcttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatca 7357654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29450716 - 29450660
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacacctt 57  Q
    |||||||||||||||||||||||||  ||| |||||||||| |||||||||||||||    
T  29450716 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctt 29450660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 15743 - 15661
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |||||||||||||| |||| ||||||||  |  | ||||||||||||| |||||||||| || | ||||| | ||||||||||    
T  15743 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatca 15661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 13513654 - 13513751
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    ||||| ||||||||| |||| || ||||| |||||||||||||||||   |||||||||  || || |||||| ||| ||||||  || |||||||||    
T  13513654 acattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcaaccattctctgctt 13513751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 14697406 - 14697502
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||||||||| ||| |||| ||||||||  |  | || |||||||||  || ||||||| || | |||||||||||||||||||||| ||| |||||    
T  14697406 cattactcttatggcctttctcaccacaagtatagcaaacaatctcagcagtagcatctttctttctaggcctcctctcatcattcaatctttgctt 14697502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 29649 - 29957
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29649 acctctgataagtcggtcctcattaacagtttgcgtaccagtcagagcaaacaccttgccacctgtcagagccttcttaggcttcctgcactgcgagcta 29748  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||||||||||||||| ||| |||  ||||||| ||||||||| ||||||| |||||||||||||   |||||||  ||||||||||||||||    
T  29749 atatgaccttcttcatcacaattgtagcaaacaacatcaccacgcttgcactcagctattgtgtgtcctttcgtcccacaccggaaacacttcttctcat 29848  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    || ||| ||| ||||||||||||||| | |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29849 catggttacaaacattactcttgtggcccttttcaccacacttgaaatagactatctcaataggagcatctctcctcctaggcctcctctcatcattcag 29948  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  29949 tctctgctt 29957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 12857902 - 12857602
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  12857902 acctctgataagtcg-tcctcattaacagtttgcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggcttcctgcactacgagcta 12857804  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||||||||||||||| ||| |||  | ||||||||||||||| ||||||| | |||||||||||| |||||| |  ||||||||||||||||    
T  12857803 atatgaccttcttcatcacaattgtagcaaacaatatcacgacgcttgcactcagctattatgtgtcctttctttccacatcggaaacacttcttctcat 12857704  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    ||| |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  12857703 cacagtcacatacattactcatgtggcccttttcaccacacttgaaacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcag 12857604  T
Q  301 tc 302  Q
    ||    
T  12857603 tc 12857602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 14290939 - 14290634
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||  || |||||||||||||| ||||||||||||||    
T  14290939 acctctgataagtcggtcctcattcacggtttgcgtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttaggcttcttgcactgcgagcta 14290840  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||||||||||||| |||| ||||| | |||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  14290839 atatgtccctcttcatcacaattatagcaaataacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcat 14290740  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |  ||||| ||||||||||||||| |||| |||||||||||||| || | ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  14290739 ctcaatcacacacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcag 14290640  T
Q  301 tctctg 306  Q
     |||||    
T  14290639 cctctg 14290634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 3 - 306
Target Start/End: Original strand, 35982905 - 35983208
Alignment:
Q  3 ctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaat 102  Q
    |||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||   | |||||||||||| | | || ||||| |||||    
T  35982905 ctctgataagtcggtcctcattcaccgtttgcgtaacagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacaatgcgaactaat 35983004  T
Q  103 aagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatca 202  Q
    | | ||||| |||| ||| || ||| |||  | ||| | ||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||     
T  35983005 atgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatct 35983104  T
Q  203 cggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtc 302  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| || | |||| || ||||||||||||||||| |||||||||||||||||||||| |    
T  35983105 cggtcacacacattactcttgtggcctttctcaccacacttgaagcaaataatcacagtaggagcatctctcctcttaggcctcctctcatcattcagcc 35983204  T
Q  303 tctg 306  Q
    ||||    
T  35983205 tctg 35983208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 16825686 - 16825382
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||| ||||||||| || ||||||||||||| ||||||||||||||||||||||||   | |||||||||||| | | |||||| | ||     
T  16825686 acctctgataagtcagtcctcattcaccgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcaaactg 16825587  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||   | || ||| |||  |  || | |||||| ||||||||||| ||||||||||| |  |||||||| || |||||||||||||    
T  16825586 atatgaccttcctcattgaagttgtagcaaacaatgtccccacgcttacaatcagctaaagtgtgtccttttttaccacacctgaagcacttcttctcat 16825487  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||| || | |||||||||||||| ||||     
T  16825486 cacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcatcttgggcctcctctcatctttcaa 16825387  T
Q  301 tctct 305  Q
    |||||    
T  16825386 tctct 16825382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 15230325 - 15230634
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||| |||||||||  ||||||||||| ||  | ||||| | ||| ||||||||||| ||||||||  || ||||||||||||||||||| |||||||||    
T  15230325 acctatgataagtcaatcctcattaaccgtccgtgtaccggtcaatgcaaacacctttccacctgtctgatccttcttaggcttcctgcattgcgagcta 15230424  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    | | |||||||||||||||||||  || |||  | ||||| ||||||||| |||||||  || || |||||||  ||||| |  |||||||| |||||||    
T  15230425 agatgaccttcttcatcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcagaaacactttttctcat 15230524  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||  | ||| ||||||||||||||| | ||||||||||||||| | || |||||||||  |||| ||||| | ||| ||||||||||||||||||| |     
T  15230525 caccattacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaa 15230624  T
Q  301 tctctgcttc 310  Q
    ||| ||||||    
T  15230625 tctttgcttc 15230634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 15236193 - 15236502
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||| |||||||||  ||||||||||| ||  | ||||| | ||| ||||||||||| ||||||||  || ||||||||||||||||||| |||||||||    
T  15236193 acctatgataagtcaatcctcattaaccgtccgtgtaccggtcaatgcaaacacctttccacctgtctgatccttcttaggcttcctgcattgcgagcta 15236292  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    | | |||||||||||||||||||  || |||  | ||||| ||||||||| |||||||  || || |||||||  ||||| |  |||||||| |||||||    
T  15236293 agatgaccttcttcatcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcagaaacactttttctcat 15236392  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||  | ||| ||||||||||||||| | ||||||||||||||| | || |||||||||  |||| ||||| | ||| ||||||||||||||||||| |     
T  15236393 caccattacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaa 15236492  T
Q  301 tctctgcttc 310  Q
    ||| ||||||    
T  15236493 tctttgcttc 15236502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 12357934 - 12357630
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||   ||||||||||||| || ||||||||| || ||||| ||   | ||||||| || |   | |||||||| ||     
T  12357934 acctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactg 12357835  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  || |||||| |||  || || |  ||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||    
T  12357834 atatgaccttcctcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcat 12357735  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |    ||||| ||||||||||||||| ||||||| ||||||||| | || |||||||||  ||||| |||||||||| | ||||||||||||||||||||    
T  12357734 ctttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagtatctctcctcttgggcctcctctcatcattcag 12357635  T
Q  301 tctct 305  Q
     ||||    
T  12357634 cctct 12357630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 18131754 - 18131449
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||   ||||||||||||| || || |||||| || ||||| |||  | |||||||  | |   | |||||||| |||    
T  18131754 acctctgataagtcgatcctcactagtggtttgcgtaccagtcagagtaaacactttaccaccggttctaaccttcttcagttgagtacactgcgaacta 18131655  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||| ||| ||||  || |||||| | |  ||||| | |||||| |||| |||||||| |||||||||||| |||||||| || |||||||||||||    
T  18131654 atatgactttcctcattgcagttatagcacactacatccccacgcttacaattagctaatgcgtgtcctttctgaccacacctgaagcacttcttctcat 18131555  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |    ||||| ||||||||||||||| |||| || ||||||||| | ||  ||||||||| |||||||||||||||| | ||||||||||||| ||||||    
T  18131554 ctttatcacaaacattactcttgtggcctttctcgccacacttgtagcaatcaatctcaacaggagcatctctcctcttgggcctcctctcattattcag 18131455  T
Q  301 tctctg 306  Q
    ||||||    
T  18131454 tctctg 18131449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 31941625 - 31941923
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||   ||||||||||||| ||||||||||||||| ||||| ||   | ||||||| |||| | | ||||  || ||     
T  31941625 acctctgataagtcgatcctcactagtggtttgcgtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactatgaactg 31941724  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || || ||||  ||||||||  |||  ||||||| ||||||||| |||||||  |||||||| ||||| |||||||| ||||||||||||||||    
T  31941725 atatggccctcctcattgcaattataacaaacaacatcaccacgcttgcagtcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcat 31941824  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |   |  ||| ||||||||||||||| |||| || ||||||||| |||| || ||||||  |||||||| ||||||  | |||||||||||||||||||    
T  31941825 ctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatttctcctattgggcctcctctcatcattca 31941923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 152 - 297
Target Start/End: Original strand, 17494520 - 17494664
Alignment:
Q  152 tcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacaga 251  Q
    ||||||| ||||||||||||||| |||||||| |  |||||||||||||| |  ||||| ||||||||||||||| ||||||||||||| ||||| || |    
T  17494520 tcagctagtgtgtgtcctttctgaccacacctgag-cacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacatttgaagcaaa 17494618  T
Q  252 caatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    |||||||| || |||||||||||||| | |||||||||||||||||    
T  17494619 caatctcagtatgagcatctctcctcttgggcctcctctcatcatt 17494664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 16831935 - 16831627
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||| ||||||||||||  ||| |||||||||| ||||||||||||||| ||||| |||  | ||||||| ||||   ||||||| |  ||     
T  16831935 acctctgataagacggtcctcattagtagtctgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctgtgtgcactgtgtactg 16831836  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || ||||| |  || |||||  | |  ||||||| ||||||||| || |||||   ||| || ||||| |||||||| || |||||||||||||    
T  16831835 atatggccctcttcgttgcagttataacatacaacatcaccacgcttgcagtccgctaacacgtgacccttctgaccacacctgaagcacttcttctcat 16831736  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| ||||||||||||||| |||| || |||||||| ||||| || ||||||  |||||||||||||||  | ||||||||||||||||| ||    
T  16831735 ccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattaag 16831636  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  16831635 tctctgctt 16831627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 297
Target Start/End: Original strand, 12181209 - 12181362
Alignment:
Q  144 gcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacactt 243  Q
    |||| |||||||||| ||||||||||||| | ||||| || || |||||||||||||| |  ||||| || |||||||||||| ||||||||||||||||    
T  12181209 gcttacaatcagctagtgtgtgtcctttccgaccacaactgaagcacttcttctcatctctatcacagactttactcttgtggcctttttcaccacactt 12181308  T
Q  244 gaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    ||| || | ||| ||| ||||||||||||||||| | | |||||||||||||||    
T  12181309 gaagcaaaaaatgtcagtaggagcatctctcctcttggtcctcctctcatcatt 12181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 17189096 - 17189404
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||| | ||||||||||  |||||||||||||| ||| |||||||| || ||||| |||  |  |||||| ||||   | ||||| || ||     
T  17189096 acctctgataagcctgtcctcattagtagtttgcgtaccagtcaacgcaaacactttcccaccggttctaatcttctttggctgagtacactgtgaactg 17189195  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || || ||||||||||||||  |||  |||||||  | |||||| | ||| || |||||||||||||| |||||||| || |||||||||||||    
T  17189196 atgtggccctcctcatcacaattataacaaacaacatcaccccacttgcagttagccaacgtgtgtcctttctgaccacacctgaagcacttcttctcat 17189295  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| || ||||| |||||| |||| || |||||||| ||||| ||||| |||| |||||||||||||||| | | ||||||||||||||| |     
T  17189296 ctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggagcatctctcctcttggacctcctctcatcattaaa 17189395  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  17189396 tctctgctt 17189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 309
Target Start/End: Complemental strand, 16384670 - 16384471
Alignment:
Q  110 tcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcac 209  Q
    ||||||| |||||||||| | |  ||||||| ||||||||||||||| ||  |||| || ||||| |||||||| || ||||||||||||||   |  ||    
T  16384670 tcttcattacaattatagcatacaacatcaccacgcttgcaatcagccaacatgtgacccttctgaccacacctgaagcacttcttctcatccttggtac 16384571  T
Q  210 atacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    | || |||||||||||| |||| || |||||||| ||||| || ||||||  |||||||||||||||  | ||||||||||||||||| |||||||||||    
T  16384570 aaacgttactcttgtggactttctcgccacacttaaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattaagtctctgctt 16384471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 306
Target Start/End: Complemental strand, 2037248 - 2037014
Alignment:
Q  72 ccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtccttt 171  Q
    |||||||||||||| |||||||||| |||| | ||||||| |||||||||||  |  |||  | ||||| ||||||||| ||||||| ||| || |||||    
T  2037248 ccttcttaggcttcttgcactgcgaactaagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgcccttt 2037149  T
Q  172 ctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatct 271  Q
    ||  ||||| |  || ||||||||||| ||||  |  || ||||||||||||||| | || |||||||||||| | || |||||||||  |||| |||||    
T  2037148 cttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatct 2037049  T
Q  272 ctcctcctaggcctcctctcatcattcagtctctg 306  Q
    |||||| |||| |||||||||||| ||| ||||||    
T  2037048 ctcctcttaggtctcctctcatcagtcaatctctg 2037014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 306
Target Start/End: Complemental strand, 2040989 - 2040755
Alignment:
Q  72 ccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtccttt 171  Q
    |||||||||||||| |||||||||| |||| | ||||||| |||||||||||  |  |||  | ||||| ||||||||| ||||||| ||| || |||||    
T  2040989 ccttcttaggcttcttgcactgcgaactaagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgcccttt 2040890  T
Q  172 ctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatct 271  Q
    ||  ||||| |  || ||||||||||| ||||  |  || ||||||||||||||| | || |||||||||||| | || |||||||||  |||| |||||    
T  2040889 cttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatct 2040790  T
Q  272 ctcctcctaggcctcctctcatcattcagtctctg 306  Q
    |||||| |||| |||||||||||| ||| ||||||    
T  2040789 ctcctcttaggtctcctctcatcagtcaatctctg 2040755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 306
Target Start/End: Original strand, 14039539 - 14039773
Alignment:
Q  72 ccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtccttt 171  Q
    |||||||||||||| |||||||||| |||| | ||||||| |||||||||||  |  |||  | ||||| ||||||||| ||||||| ||| || |||||    
T  14039539 ccttcttaggcttcttgcactgcgaactaagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgcccttt 14039638  T
Q  172 ctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatct 271  Q
    ||  ||||| |  || ||||||||||| ||||  |  || ||||||||||||||| | || |||||||||||| | || |||||||||  |||| |||||    
T  14039639 cttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatct 14039738  T
Q  272 ctcctcctaggcctcctctcatcattcagtctctg 306  Q
    |||||| |||| |||||||||||| ||| ||||||    
T  14039739 ctcctcttaggtctcctctcatcagtcaatctctg 14039773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 28757041 - 28757335
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||| || ||  ||  || |||||| ||||     ||||| || |||    
T  28757041 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaacta 28757140  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||| |||  ||||| ||  | |  |  || | ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||    
T  28757141 atatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcat 28757240  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    | |   |||| ||||||||||||||| |||| |||||||||||| | || |||||||||| |||||||||||||||| | |||||||| ||||||    
T  28757241 ctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 28757335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 31692592 - 31692294
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||   ||||||||||||| || |||||||||||| ||||| ||   | ||||||| |||| | | ||||| || ||     
T  31692592 acctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactg 31692493  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || || ||||  || |||||  |||  ||||||| || |||||| |||||||  |||||||| ||||  |||||||| ||||||||||||||||    
T  31692492 atatggccctcctcattgcagttataacaaacaacatcaccactcttgcagtcagctagagtgtgtcccttctaaccacacctgaaacacttcttctcat 31692393  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |   |  ||| ||||||||||||||| |||| |||||||||||| |||| || ||||||  || ||||| ||||||  | |||||||||||||||||||    
T  31692392 ctttggtacaaacattactcttgtggcctttctcaccacacttgtaacaaacgatctcagcagaagcatttctcctattgggcctcctctcatcattca 31692294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 142 - 306
Target Start/End: Complemental strand, 11958447 - 11958283
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| || ||||||| ||| ||||||||||| |||||||| ||||||||| ||||||| |   ||||  |||| || |||||| ||||||||||||||    
T  11958447 acgcttacattcagctagtgtatgtcctttctgaccacacctgaaacacttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacac 11958348  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctg 306  Q
    ||  |||| ||||| |||  |||||||||||||||| || ||||||| |||||||||| ||||||    
T  11958347 ttataacaaacaatttcagcaggagcatctctcctcttaagcctcctatcatcattcattctctg 11958283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 113 - 309
Target Start/End: Original strand, 24190138 - 24190334
Alignment:
Q  113 tcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacata 212  Q
    ||||||||||||||  |||  |||||||  | |||||| | ||| || |||||||||||||| |||||||| || ||||||||||||||   |  ||| |    
T  24190138 tcatcacaattataacaaacaacatcaccccacttgcagttagccaacgtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaa 24190237  T
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    | ||||| |||||| |||| || |||||||| ||||| ||||| |||| |||||||||||||||| |   ||||||||||||||||| |||||||||    
T  24190238 cgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggagcatctctcctcttgtacctcctctcatcattcaatctctgctt 24190334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 308
Target Start/End: Complemental strand, 15008954 - 15008684
Alignment:
Q  35 gtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatga 134  Q
    |||||||| |||||||||||| | |||| || | ||||||||||||| ||| |||||||||| |||| | | |||||||||||||| ||  |  |||  |    
T  15008954 gtaccagctaaagcaaacacccttccacttgcttgagccttcttaggattcttgcactgcgaactaagatggccttcttcatcacatttgaaacaaacaa 15008855  T
Q  135 catcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttc 234  Q
     ||||| ||||||||| |||||||  || || || |||| |||||| |  || ||||||| |||| ||  |   || ||||||||||||||| || | ||    
T  15008854 tatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttctcctcaccattg---caaacattactcttgtggcctctctc 15008758  T
Q  235 accacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgct 308  Q
    |||||||||| | || |||||||||  |||| ||||||||||| |||| |||||||||||||||| ||| ||||    
T  15008757 accacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 15008684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 295
Target Start/End: Original strand, 47126807 - 47126960
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||| |   |||| ||||||||||||||| |||| |||||||||    
T  47126807 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacac 47126906  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| | || |||||||||| |||||||||||||||| | |||||||| ||||||    
T  47126907 ttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 47126960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 105 - 297
Target Start/End: Complemental strand, 13317872 - 13317680
Alignment:
Q  105 gaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacg 204  Q
    |||||||||||| ||| |||||  |||  ||||| | |||||||||||| |||||    || ||||| || ||||| || |||||||||||||||||       
T  13317872 gaccttcttcattacagttataacaaaccacatccccacgcttgcaatccgctaaaacatgacctttttgaccacatctgaaacacttcttctcatcttt 13317773  T
Q  205 gtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    |   || |||||||| |||||| ||||| ||||||||||| |||| ||||  |||| |||||||||||||| |||||||||||||||||||||    
T  13317772 ggtgcaaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggcctcctctcatcatt 13317680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 13944746 - 13945054
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||| || |||||||||||| |||| || ||||||| ||||||||| || || |||||   |  | ||||||| ||||   ||||||| |  ||     
T  13944746 acctctgatgagacggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactg 13944845  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || ||||||| |||||||||| | |  |||||||  ||||||||||| ||||   |||| || ||||||||||| || ||||||||||||||||    
T  13944846 atgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcat 13944945  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| || |||||||||||  |||| || |||||||| || || || ||||||  ||||||||| ||| | || ||||||||||||||||| ||    
T  13944946 ccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaag 13945045  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  13945046 tctctgctt 13945054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 16327116 - 16326816
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||| |||||||||||||||||   ||| |||||||||| ||| ||||||||||| ||||| |||  | ||||||| |||||  | |||||||| ||     
T  16327116 acctctaataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacacctttccaccagttctaaccttcttcggcttagtacactgcgaactg 16327017  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||| |||  || || ||| | |  |  || | |||||| || ||||||||  ||||||| ||||| |||||||| ||||| ||| ||||||    
T  16327016 atatgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgtcccttctgaccacacctgaaacatttcctctcat 16326917  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaa-tctcaataggagca-tctctcctcctaggcctcctctcatcattc 298  Q
    | |   |||| ||||| ||||||||| ||||||||||||||||  |||| |||| |||||  ||||||| ||||||||| | || ||||| |||||||||    
T  16326916 ctctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaagtctcagcaggagcagtctctcctcttgggtctcctatcatcattc 16326817  T
Q  299 a 299  Q
    |    
T  16326816 a 16326816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 110 - 309
Target Start/End: Complemental strand, 8744688 - 8744489
Alignment:
Q  110 tcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcac 209  Q
    ||||||| |||||||||| | |  |||||||  ||||||||||| ||||   |||| || ||||||||||| || |||||||||||||||||   |  ||    
T  8744688 tcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtac 8744589  T
Q  210 atacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    | || |||||||||||  |||| || |||||||| || || || ||||||  ||||||||| ||| | || ||||||||||||||||| |||||||||||    
T  8744588 aaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 8744489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 295
Target Start/End: Original strand, 10408831 - 10408984
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||| |   |||| ||||||||||||||| |||| ||||||||     
T  10408831 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacat 10408930  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| |||| |||||||||   ||||||||||||||| | |||||||| ||||||    
T  10408931 ttgtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatca 10408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 2247230 - 2247135
Alignment:
Q  32 tgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatag 127  Q
    |||||||||| ||||||||| ||||| ||||| ||  | ||||||||||||||| |||||||||| |||||| |||||||||||| ||| ||||||    
T  2247230 tgcgtaccagtcaaagcaaaaaccttcccaccagtctgggccttcttaggcttcttgcactgcgaactaatatgaccttcttcattacagttatag 2247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 12843309 - 12843216
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctg 306  Q
    |||||||||||||| |||| ||||||||  |  | ||||||||||||| |||||||||| || ||||||||| |||||||||| ||| ||||||    
T  12843309 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttcttcctaggccgcctctcatcaatcattctctg 12843216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10408690 - 10408752
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    ||||||||||||| |||||||||||  ||| |||||||||| ||||||||||||||| |||||    
T  10408690 acctctgataagttggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccacc 10408752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 47126666 - 47126728
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    ||||||||||||||||||||| |||  ||| |||||||||| ||||||||||||||| |||||    
T  47126666 acctctgataagtcggtcctcgttaggagtctgcgtaccagtcaaagcaaacaccttaccacc 47126728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 13028720 - 13028661
Alignment:
Q  44 aaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaata 103  Q
    |||||||||||||| |||||||   ||||||||||||||||| |||||||||| ||||||    
T  13028720 aaagcaaacacctttccacctgcctgagccttcttaggcttcttgcactgcgaactaata 13028661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 299
Target Start/End: Original strand, 15262589 - 15262640
Alignment:
Q  248 cagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    ||||||||||||| |||||||||| |||| ||| ||||||||||||||||||    
T  15262589 cagacaatctcaacaggagcatctttccttctacgcctcctctcatcattca 15262640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 11949190 - 11949132
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatc 201  Q
    ||||| |||||||||||| ||||||||||||| ||||| || || ||||||||||||||    
T  11949190 cgcttacaatcagctaatatgtgtcctttctgaccacatctgaagcacttcttctcatc 11949132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13317941 - 13317879
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    |||||||||||| ||||||||||||  ||| |||||||||| |||||||||||| || |||||    
T  13317941 acctctgataagacggtcctcattagtagtctgcgtaccagtcaaagcaaacacttttccacc 13317879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11958588 - 11958506
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggct 83  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||| |||||||| || ||||| ||   ||||||||| ||||    
T  11958588 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggct 11958506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12181066 - 12181128
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    |||||||||||||||||||||| ||   |||| |||||||| |||||||||||| || |||||    
T  12181066 acctctgataagtcggtcctcactagtggtttacgtaccagtcaaagcaaacactttaccacc 12181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16378341 - 16378285
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacacctt 57  Q
    |||||||||||| ||||||||||||  ||| |||||||||| | ||||||| |||||    
T  16378341 acctctgataagacggtcctcattagtagtctgcgtaccagtccaagcaaatacctt 16378285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 43601 - 43296
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||  || ||||||| |||||| ||||||||||||||    
T  43601 acctctgataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttgggcttcttgcactgcgagcta 43502  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| |||||||||||||||||| |||  ||||| | |||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  43501 atatgaccctcttcatcacaattatagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcat 43402  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | || ||||| ||||||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  43401 ctcgatcacacacattactcttgtggcccttttcacgacacttgaaacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattcag 43302  T
Q  301 tctctg 306  Q
     |||||    
T  43301 cctctg 43296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 21474557 - 21474865
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||    
T  21474557 acctctgataagtcggtcctcattagaagtttgcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggtttcctgcactgagaacta 21474656  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| |||||||||||||| ||| | |  | ||||| ||||||||| ||||| ||||||||||||||||  ||||| |  ||||||||||||||||    
T  21474657 atatgaccctcttcatcacaattgtagcacacaatatcaccacgcttgcactcagccaatgtgtgtcctttcttcccacatcggaaacacttcttctcat 21474756  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21474757 cacggtcacatacattactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcag 21474856  T
Q  301 tctctgctt 309  Q
      |||||||    
T  21474857 catctgctt 21474865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 25770801 - 25771106
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||| ||||||||||||| ||| || ||||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  25770801 acctctgataagtcggtccttattaacagtttgcttactagtcaaaggaaacaccttgccacctgtcagagccttcttaggtttcctgcactgagagcta 25770900  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||||||||||||||| ||| | |  | ||||| |||||||||||||| ||||||||||||||||   ||||| | |||||||||||||||||    
T  25770901 atatgaccttcttcatcacaattgtagcacacaatatcaccacgcttgcaatcagataatgtgtgtcctttcgtcccacatcgaaaacacttcttctcat 25771000  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  25771001 cacggtcacataaattattcttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcag 25771100  T
Q  301 tctctg 306  Q
     |||||    
T  25771101 cctctg 25771106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 19486618 - 19486309
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||| ||||||| ||| |||||||   |||||||||||||||||||||||||||| |||    
T  19486618 acctctgataagtcggtcctcattaaatgtttgcgtaccagtcaatgcaaacaactttccacctgcctgagccttcttaggcttcctgcactgcgaacta 19486519  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    | | |||||||||| ||||||||  || |||  | ||||| | ||||||| || ||||  || || |||||||  ||||| |  || |||||||||||||    
T  19486518 agatgaccttcttcgtcacaattgaagcaaacaatatcaccatgcttgcattccgctatcgtatgccctttcttcccacatcggaagcacttcttctcat 19486419  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||  |  || ||||||||||||||| | || |||||||||||| | || ||||||||| ||||| ||||||| ||| |||| ||||||||||||||||     
T  19486418 caccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaa 19486319  T
Q  301 tctctgcttc 310  Q
    ||| ||||||    
T  19486318 tctttgcttc 19486309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 19456121 - 19456279
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| |||||| ||| ||||||||||||||| |  ||||| || |||||||||||||| |  ||||| ||||||||||||||| ||||||||||||||    
T  19456121 acgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacac 19456220  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    ||||| || ||||||||| |||||| |||||||||| | ||||||||||||||||||||    
T  19456221 ttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcag 19456279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 19466266 - 19466424
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| |||||| ||| ||||||||||||||| |  ||||| || |||||||||||||| |  ||||| ||||||||||||||| ||||||||||||||    
T  19466266 acgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacac 19466365  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    ||||| || ||||||||| |||||| |||||||||| | ||||||||||||||||||||    
T  19466366 ttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcag 19466424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 24515590 - 24515433
Alignment:
Q  149 caatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaac 248  Q
    |||||||||| |||||||| |||||| |||||||| |||||||||||||||||      ||| ||||||||||||||| |||| |||||||||||  |||    
T  24515590 caatcagctagtgtgtgtcttttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttataac 24515491  T
Q  249 agacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctg 306  Q
    | ||||| |||| |||||||||||||||| | |||||||||||||||||||| |||||    
T  24515490 aaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcagcctctg 24515433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 72 - 306
Target Start/End: Original strand, 16813668 - 16813902
Alignment:
Q  72 ccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtccttt 171  Q
    |||||||||||||| ||||||| ||  ||| | |||||||||||||||||||  |  |||  | ||||| ||||||||| ||||||| |||||| | |||    
T  16813668 ccttcttaggcttcttgcactgtgaagtaagatgaccttcttcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtgtgccattt 16813767  T
Q  172 ctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatct 271  Q
    ||  ||||| |  || ||||||||||| ||||  |  || ||||||||||||||| |||| |||||||||||| | || |||||||||  |||| |||||    
T  16813768 cttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggatcatct 16813867  T
Q  272 ctcctcctaggcctcctctcatcattcagtctctg 306  Q
    |||||| |||| |||||||||||||||| ||||||    
T  16813868 ctcctcttaggtctcctctcatcattcaatctctg 16813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 142 - 309
Target Start/End: Complemental strand, 10466031 - 10465864
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| || |||||||  |||||||| ||||| |||||||||||||| ||| ||||||| |   ||||  |||| ||||||||| ||||||||||||||    
T  10466031 acgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacac 10465932  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    ||| ||||||||||||||  |||| ||||||||||| | |||||||| |||||||||| | |||||||    
T  10465931 ttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattcattttctgctt 10465864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 14377240 - 14376942
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||| ||  ||| |||||||||| ||| |||||||| || ||||| |||  | ||||||| ||||   | || ||||| ||     
T  14377240 acctctgataagtcggtcctcactagtagtctgcgtaccagtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtacattgcgaactg 14377141  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || |||||||  || |||||  |||  ||||||| |||||| |||| |||||| |||||||||||||| |||||||| || |||||||||||||    
T  14377140 atgtggccctcttcattgcagttataacaaacaacatcaccacgcttacaattagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcat 14377041  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |      ||| ||||||||||||||| |||| ||||| |||||| | || ||||  |||| |||||||||||||||  | || ||||||||||||||||    
T  14377040 ctttagtacaaacattactcttgtggcctttctcaccgcacttgtagcaaacaacatcaacaggagcatctctcctattgggtctcctctcatcattca 14376942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 18797647 - 18797955
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||  ||| |||||||||| ||| |||||||| || ||||| |||  | ||||||| || |   ||||||| || ||     
T  18797647 acctctgataagtcgatcctcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttctttggttgagtgcactgtgaactg 18797746  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | ||||| ||||  || |||||| |||  || |||| |||||||||||||||||  |||||||| ||||| |||||||| ||||| |||| |||||    
T  18797747 atatggccttcatcattgcagttatagcaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacatttctgctcat 18797846  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |       || ||||||||||||||| |||| || ||||||||  |||| ||||| || | ||||||||| |||||| | |||||||||||||||||||     
T  18797847 ctttagtgcaaacattactcttgtggcctttctcgccacacttataacaaacaatatccacaggagcatccctcctcttgggcctcctctcatcattcaa 18797946  T
Q  301 tctctgctt 309  Q
    ||| |||||    
T  18797947 tctttgctt 18797955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 134 - 297
Target Start/End: Original strand, 19438092 - 19438255
Alignment:
Q  134 acatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtcttttt 233  Q
    ||||||| |||||||||||||||||  |||||||||||||| |||||||| |||||||| ||||||||      ||| |||||||||  |||| |||| |    
T  19438092 acatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttattctcatctttagtacaaacattactcaagtggcctttct 19438191  T
Q  234 caccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    ||||||||||| |||  || ||||||  |||||||||||||||| | |||||||||||||||||    
T  19438192 caccacacttgtaacgaacgatctcagcaggagcatctctcctcttgggcctcctctcatcatt 19438255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 24367357 - 24367651
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||| ||||| |||  ||  ||||| || |    |||||| || |||    
T  24367357 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacaccttcccaccagttctagttttcttcggttcagggcactgtgaacta 24367456  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||| |||  ||||| ||  | |  |  || |  |||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||    
T  24367457 atatgaccttctccattgcaattgtaacagacaatgtccccccgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcat 24367556  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    | |   |||| ||||||||||||||| |||| |||||||||||| | || |||||||||| | |||||||||||||| | |||||||| ||||||    
T  24367557 ctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacatgagcatctctcctcttgggcctcctatcatca 24367651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 299
Target Start/End: Complemental strand, 8720893 - 8720731
Alignment:
Q  137 tcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcac 236  Q
    |||| ||||||||| ||||||| ||| || |||||||  ||||| |  || ||||||||||| ||||  |  || ||||||||||||||| |||| ||||    
T  8720893 tcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcctttctcac 8720794  T
Q  237 cacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||||||| | || |||||||||  |||| ||||||||||| |||||||||||||||||||||    
T  8720793 cacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcattca 8720731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 21567315 - 21567014
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||   ||||| ||||  ||| |||||||||| |||||||||||| || ||||| |||  |  |||||| ||||   ||||||| || ||     
T  21567315 acctctgataagcatgtccttattagtagtctgcgtaccagtcaaagcaaacacttttccaccggttctaatcttctttggctgagtgcactgggaactg 21567216  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || || | ||||||||||||  |||  |||||||  | |||||| | ||| ||||||||||||||||| |||||||| || |||||||||||||    
T  21567215 atgtggccctccttatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcat 21567116  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |      ||| |||||||| |||||| |||| || |||||||| || || || || |||  |||||||||||||||| | ||||| ||||||||||||||    
T  21567115 ctttagtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagcatctctcctcttgggccttctctcatcattcag 21567016  T
Q  301 tc 302  Q
    ||    
T  21567015 tc 21567014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 23081592 - 23081676
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    |||||||||||||| |||| ||||||||  |  |||| |||||||||| |||||||||| || ||||||||| ||||||||||||    
T  23081592 cattactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcatctttcttcctaggccgcctctcatcatt 23081676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 25958864 - 25958770
Alignment:
Q  214 attactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgct 308  Q
    ||||||| ||||| |||| | ||||||| || | || ||||||||| ||||||||||||| ||| |||| ||||||||||||| |||||| ||||    
T  25958864 attactcctgtggcctttcttaccacacctgtagcaaacaatctcagtaggagcatctctactcttaggtctcctctcatcatccagtctttgct 25958770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 306
Target Start/End: Original strand, 15462459 - 15462598
Alignment:
Q  167 cctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggag 266  Q
    |||||||| || || || ||||| ||||||||||| | |   || ||||||||||||||| ||||  ||||||||||| |||| ||||  |||| |||||    
T  15462459 cctttctgaccgcatctgaaacatttcttctcatctctggtgcagacattactcttgtggcctttcgcaccacacttgtaacacacaacatcaacaggag 15462558  T
Q  267 catctctcctcctaggcctcctctcatcattcagtctctg 306  Q
      |||||||  ||||||  |||||||||||||| ||||||    
T  15462559 tctctctccctctaggctgcctctcatcattcaatctctg 15462598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 299
Target Start/End: Complemental strand, 30678137 - 30678050
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||||||||||||||   || |||||||||||| | || |||| ||||  ||||| |||| || | ||||||||||||||||||||||    
T  30678137 acattactcttgtggctcttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattca 30678050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 21764980 - 21765026
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctc 258  Q
    ||||| ||||||||| |||| |||||||| |||||||||||||||||    
T  21764980 acattgctcttgtggcctttctcaccacaattgaaacagacaatctc 21765026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 18405056 - 18405012
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatct 257  Q
    |||||||||||||| |||| ||||||||  |||||||||||||||    
T  18405056 cattactcttgtggcctttctcaccacaagtgaaacagacaatct 18405012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 1454 - 1146
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  1454 acctctgataagtcggtcctcattagtagttttcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggcttcctgcactgagagcta 1355  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| |||||||||||||| ||| | |  | ||||| |||||| || ||||| ||||||||||||||||  ||||| |  ||||||||||||||||    
T  1354 atatgaccctcttcatcacaattgtagcacacaatatcaccacgcttacactcagccaatgtgtgtcctttcttcccacatcggaaacacttcttctcat 1255  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  1254 cacggtcacatacattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcag 1155  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  1154 tctctgctt 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 28467 - 28159
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  28467 acctctgataagtcggtcctcattagtagttttcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggcttcctgcactgagagcta 28368  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| |||||||||||||| ||| | |  | ||||| |||||| || ||||| ||||||||||||||||  ||||| |  ||||||||||||||||    
T  28367 atatgaccctcttcatcacaattgtagcacacaatatcaccacgcttacactcagccaatgtgtgtcctttcttcccacatcggaaacacttcttctcat 28268  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  28267 cacggtcacatacattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcag 28168  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  28167 tctctgctt 28159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 51773 - 52078
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||| ||||||||| ||| | |||||||||| ||||| ||||||||||||||||||  || ||||||| |||| | | ||||| || |||    
T  51773 acctctgataagtcagtcctcattcacaatctgcgtaccagtcaaagtaaacaccttgccacctgtccgaaccttctttggctgcgtacactgtgaacta 51872  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    |||  ||||||||||||||| ||||||||||  ||||||| | ||||||||| |||||| |||||||||||||  ||||||||||| |||||||||||||    
T  51873 atattaccttcttcatcacagttatagaaaacaacatcaccatgcttgcaataagctaaagtgtgtcctttcttaccacacctaaagcacttcttctcat 51972  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | || ||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  51973 ctcgatcacatacattactcttgtggcctttctcaccacacttgaaacagataatctcagtaggagcatctctcctcctaggcctcctctcatcattcag 52072  T
Q  301 tctctg 306  Q
     |||||    
T  52073 cctctg 52078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 21742803 - 21742495
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||| ||| ||||| ||||||||||||||   | |||||||||||| | | |||||||| |||    
T  21742803 acctctgataagtcggtcctcattcactgtttgcgtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgcgtacactgcgaacta 21742704  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | ||||| |||| ||| || ||| |||  ||||| | ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  21742703 atatgtccttcctcattacagttgtagcaaacaacatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcat 21742604  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |||||||||||||||||||||||| |||| |||||||||||||| || | ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  21742603 ctcggtcacatacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcag 21742504  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  21742503 tctctgctt 21742495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 21739287 - 21738979
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||   | |||||||||||| | | |||||||| ||     
T  21739287 acctctgataagtcggtcctcattaaccgtttgcgtaccagtcaaagaaaacagcttgccacctgtcctaaccttcttaggctccgtacactgcgaactg 21739188  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||||||| | | || ||| |||  ||||| | |||||| |||||| |||| |||||||||||||| ||||||||||| |||||||||||||    
T  21739187 atatgaccttcttcattatagttgtagcaaaaaacatccccacgcttacaatcaactaaggtgtgtcctttctgaccacacctaaagcacttcttctcat 21739088  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | || ||||| ||||||||||||||| |||| |||||||||||||| || | ||||||| |||||||| |||||||| |||||||||||||||||||||     
T  21739087 ctcgatcacaaacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcacctctcctcttaggcctcctctcatcattcaa 21738988  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  21738987 tctctgctt 21738979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 22015996 - 22015700
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||   | ||||||| |||| | | |||||| | |||    
T  22015996 acctctgataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttcggctgcgtacactgcaaacta 22015897  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| || |||| || |  || |||||  |||  ||||| | |||||||||||||||||| |||||||||||||| |||||||| || |||||||||||||    
T  22015896 atatgatcttcctcgttgcagttataacaaacaacatccccacgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcat 22015797  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    | |  ||||| |||||||| || ||| ||||||| ||||||||||| || ||||| |   |||||||||||||| || | |||||||||||||||||    
T  22015796 ctctatcacaaacattacttttttggcctttttctccacacttgaatcaaacaatatttgtaggagcatctctcttctttggcctcctctcatcatt 22015700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 24096866 - 24096568
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||| ||||||||||  ||| |||||||||| ||| |||||||| || ||||| |||  ||||||||| ||||   | ||||| || ||     
T  24096866 acctctgataagtcagtcctcattagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctagccttcttcggctgagtacactgtgaactg 24096767  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||||| |  || || ||| |||  |  || | |||||| || ||||||| ||||||||||||||| |||||||||||||||||| ||||||    
T  24096766 atatgaccttcttcgttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcat 24096667  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    | |   ||||  |||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||| | |||||||||||||||||||    
T  24096666 ctctaccacaagcattactcttgtggcctttttcaccacacttgaaacaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattca 24096568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 143 - 309
Target Start/End: Original strand, 19857555 - 19857721
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| |||||||||| ||||||||||||||| |||||||| || || ||||||||||| |  ||||| ||||||||||||||| |||||||||||||||    
T  19857555 cgcttacaatcagctagtgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacagacattactcttgtggcctttttcaccacact 19857654  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||| || ||||||||  ||| ||||||||||||| |||||||||||||||||||||  ||||||||    
T  19857655 tgaagcaaacaatctcggtagaagcatctctcctcttaggcctcctctcatcattcaacctctgctt 19857721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 145 - 309
Target Start/End: Complemental strand, 20833007 - 20832843
Alignment:
Q  145 cttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttg 244  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||      ||| ||||||||||||||| |||| || |||||||||    
T  20833007 cttgcaatcagctagtgtgtgtcctttctgaccacacctgaaacaattcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttg 20832908  T
Q  245 aaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
     | || ||||| |||| |||||||||||||||| | || ||||||||||||||||| ||||||||    
T  20832907 tagcaaacaatatcaacaggagcatctctcctcttgggtctcctctcatcattcagcctctgctt 20832843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 21961166 - 21961464
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||||||||| ||||| ||||| |||  | ||||||| ||||    ||||||||| ||     
T  21961166 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaaagcaaatacctttccaccagttctaaccttcttcggctcagggcactgcgaactg 21961265  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||| |||  || || ||| | |  | ||| | |||||| || ||||||||  ||||||| ||||| |||||||| || |||||| ||||||    
T  21961266 atatgaccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcat 21961365  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |     |||| ||||| ||||||||| ||||||||||||||||| |||| |||||||||  |||||||||||||||| | || ||||| ||||||||||    
T  21961366 ctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattca 21961464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 299
Target Start/End: Original strand, 52989021 - 52989178
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| || ||||||||  |||| || ||||| |||||||| ||||||||| |||||||     |||| ||||| ||||||||| ||||||||||||||    
T  52989021 acgcttacattcagctaaattgtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacac 52989120  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    ||| |||| |||||||||  |||||||||||||||| |||||||||| ||||||||||    
T  52989121 ttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 52989178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 37680188 - 37680482
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||| ||||||||||  ||| |||||||||| ||||||||||||||| |||||  ||  || |||| | ||||     ||||| || |||    
T  37680188 acctctgataagtctgtcctcattaggagtctgcgtaccagtcaaagcaaacaccttcccaccaattctagtcttcctcggctcaggacactgtgaacta 37680287  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||| |||  ||||| ||  | |  |  || | ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||    
T  37680288 atatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcat 37680387  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    | |   |||| ||||||||||||||| |||| |||||||||||| | || |||||||||| ||||| |||||||||| | |||||||| ||||||    
T  37680388 ctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagtatctctcctcttgggcctcctatcatca 37680482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 48426012 - 48426306
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||| |||||  ||  || |||||| ||||     ||||| || ||     
T  48426012 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactg 48426111  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||  |||  || || ||  | |  |  || | ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||    
T  48426112 atatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcat 48426211  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    | |   |||| ||||||||||||||| |||| |||||||||||| | || |||||||||| |||||||||||||||| | |||||||| ||||||    
T  48426212 ctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 48426306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 295
Target Start/End: Complemental strand, 38909936 - 38909783
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||| |   |||| ||||||||||||||| |||| |||||||||    
T  38909936 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacac 38909837  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| | || |||||||||| |||||||||||||||| | |||||||| ||||||    
T  38909836 ttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 38909783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 18273117 - 18273213
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgct 308  Q
    ||||||||||||||| | || |||||||||||| |||| ||||||||| ||||| ||||||| ||| |||| |||||||||||||||| ||| ||||    
T  18273117 acattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 18273213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 20074960 - 20074666
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||| ||||||| |||||| || |||  | ||||||| ||||     ||||||||  |     
T  20074960 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacatcttgcccccagttctaaccttcttcggctcaggacactgcgaattg 20074861  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||| |||  || || ||| | |  | ||| | ||||||||| ||||| ||  |||| || ||||| |||||||| || |||||| ||||||    
T  20074860 atatgaccctctccattgcagttgtagcagacaatatccccacgcttgcattcagccaagctgtgacccttctgaccacacctgaagcacttcctctcat 20074761  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |      ||| ||||| ||||||||| |||| |||||||||||| |||| ||||||||| | ||||||||||||||| || ||||||| ||||||    
T  20074760 ctttactacaaacattgctcttgtggcctttctcaccacacttgtaacacacaatctcagtgggagcatctctcctcttaagcctcctgtcatca 20074666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 295
Target Start/End: Original strand, 20297663 - 20297816
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| |||||||   |||| || ||||  |||||||| || |||||| |||||||     |||| |||||||||||||||  ||| |||||||||    
T  20297663 acgcttgcattcagctaggctgtgacccttctaaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcatttctcaccacac 20297762  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| |||| |||||||||  |||||||||||||||| | |||||||| ||||||    
T  20297763 ttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctgtcatca 20297816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 309
Target Start/End: Complemental strand, 31537107 - 31536940
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  |||| || ||||| |||||||| || || ||  | ||||| |   |||| ||||| ||||||||| |||| |||||||||    
T  31537107 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacac 31537008  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    ||  |||| |||||||||  |||||||||||||||| | || ||||| ||||||||||  ||||||||    
T  31537007 ttataacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcctctgctt 31536940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52988880 - 52988939
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgcc 60  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||| ||||||||||||||    
T  52988880 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttgcc 52988939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31537248 - 31537186
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    |||||||||||||||||| ||||||  ||| |||||||||| || |||||||||||| |||||    
T  31537248 acctctgataagtcggtcttcattaggagtctgcgtaccagtcagagcaaacacctttccacc 31537186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38910077 - 38910015
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    |||||||||||||||||||||||||  ||| |||||||||| ||| ||||| ||||| |||||    
T  38910077 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaggcaaaaacctttccacc 38910015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 1843 - 2147
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||  ||  |||||| |||||| ||||||||||||||    
T  1843 acctttgataagtcggtcctcattcaccgtttgcgtaccagtcaaagcaaacaccttgccacctgtccgaaacttcttgggcttcttgcactgcgagcta 1942  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||||||||||||| | |  ||||| | |||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  1943 atatgtccctcttcatcacaattatagcatacaacatccc-acgcttacaatcagctaaagtatgtcctttctgtccacacctaaagcacttcttctcat 2041  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |||||||| ||||||||||||||| |||| |||||||||||||| || | ||| ||| |||||||||||| |||| ||||||||||||||||||||||    
T  2042 ctcggtcacacacattactcttgtggcctttctcaccacacttgaagcaaataatttcagtaggagcatctcacctcttaggcctcctctcatcattcag 2141  T
Q  301 tctctg 306  Q
     |||||    
T  2142 cctctg 2147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 70230 - 70535
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||   | |||||||||||| | | |||||||| |||    
T  70230 acctctgataagtcggtcctcattcaccgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaacta 70329  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | ||||| |||| ||| || ||| |||  | ||| | ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  70330 atatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcat 70429  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |||||||| ||||||||||||||| |||| ||||||||||| || || | ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  70430 ctcggtcacacacattactcttgtggcctttctcaccacacttaaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcag 70529  T
Q  301 tctctg 306  Q
     |||||    
T  70530 cctctg 70535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 5724 - 6023
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||   | |||||||||| ||||||| ||| || |||||||||| ||| |||||| |||||||    
T  5724 acctctgataagtcggtcctcattcactgtttgcgtaccaattagagcaaacaccatgccaccggttcgaaccttcttaggtttcttgcactacgagcta 5823  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || |||||||||||||||||  |||  ||||| | ||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||    
T  5824 atgtgtccctcttcatcacaattataacaaacaacatccccacgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttat 5923  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |  ||||| ||||||||||||||| |||| ||||||||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  5924 ctcaatcacacacattactcttgtggcctttctcaccacacttgaaatagacagtctcattaggggcatctctcctcctaggcctcctctcatcattcag 6023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 5303 - 5610
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||| ||| ||||| |||||||||||||    || ||||||||||| | | |||||||| ||     
T  5303 acctctgataagtcggtcctcattcactgtttgcgtaccagtcaacgcaaaaaccttgccacctgacctagacttcttaggctgcgtacactgcgaactg 5402  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||||||| ||| || ||| |||  ||||| | |||||| ||||||||||| |||||||||||||| |||||||| || |||||||||||||    
T  5403 atatgaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcat 5502  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||||| || |||||||||||||||||||     
T  5503 ctcggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcct-cttggcctcctctcatcattcaa 5601  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  5602 tctctgctt 5610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 153; Significance: 4e-81; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 5 - 309
Target Start/End: Complemental strand, 62950 - 62646
Alignment:
Q  5 ctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataa 104  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||||||   | | |||||||||| | | |||||||| || |||     
T  62950 ctgataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacactttgccacctgtcctaactttcttaggctgcgtacactgcgaactgatat 62851  T
Q  105 gaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacg 204  Q
    |||||| ||||| ||| || |||||||  ||||| | |||||| ||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||| |    
T  62850 gaccttattcattacagttgtagaaaacaacatccccacgcttacaatcagctaaagtgtgtactttctgaccacacctaaagcacttcttctcatcatg 62751  T
Q  205 gtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctc 304  Q
    |||||||||||||||||||||| |||| ||||||||||||||  | ||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  62750 gtcacatacattactcttgtggcctttctcaccacacttgaattaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaatctc 62651  T
Q  305 tgctt 309  Q
    |||||    
T  62650 tgctt 62646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 65480 - 65211
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||| | |||||||||   ||| |||||||||| ||| ||| |||| || ||||| ||   | ||||||| ||||   ||||||| || ||     
T  65480 acctctgataagcctgtcctcattggtagtctgcgtaccagtcaatgcatacacttttccaccggtcctaaccttctttggctgggtgcactgtgaactg 65381  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | ||||| ||||||||||||||  |||  ||||| |  | ||| |||| ||| || |||||||||||||| |||||||| || ||||| |||||||    
T  65380 atgtggccttcctcatcacaattataacaaacaacatctcctctcttacaattagccaacgtgtgtcctttctgaccacacctgaagcactttttctcat 65281  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatc 270  Q
    |   |  ||| ||||||||||||||| |||| || ||||||||| |||| |||| ||||  |||||||||    
T  65280 ctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggagcatc 65211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 4486 - 4188
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || || |||||||||| ||||||||||||||||||||||||   | |||||||||||| | | |||||||| |||    
T  4486 acctctgataagtcggtcctcattcaccgtctgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaacta 4387  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | ||||| |||| ||| || ||| |||  | ||| | ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  4386 atatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcat 4287  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    | || ||||| |||||||| |||| |||||| |||||||||||||| || | ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  4286 ctcgatcacacacattacttttgtagtctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattca 4188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 50227 - 50524
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||| ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||   | ||||||||||||   | |||| ||| ||     
T  50227 acctctaataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgggtacactacgaactg 50326  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  || || ||| |||  | ||| | |||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  50327 atatgaccttcctcattgcagttgtagcaaacaatatccccacgcttacaatcagctaaggtgtgtcctttctgaccacacctgaaacacttcttctcat 50426  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattc 298  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| | ||||||||||||||||||    
T  50427 ctcggtcacaaacattactcttgtggtctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattc 50524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 145; Significance: 3e-76; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 5562 - 5870
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||| ||| |||||||| |||||||||||   | |||||||||| | | | |||||||| ||     
T  5562 acctctgataagtcggtcctcattcaccgtttgcgtaccagtcaacgcaaacactttgccacctgtcctaaccttcttaggttgcgtacactgcgaactg 5661  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||||||| |||||| ||| |||  ||||| | |||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  5662 atatgaccttcttcattacaattgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcat 5761  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | || ||||| || |||||||||||| |||| |||||||||||||| || |  |||||| ||||||||||||||||| || ||||||||||||||||||     
T  5762 ctcgatcacacacgttactcttgtggcctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaagcctcctctcatcattcaa 5861  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  5862 tctctgctt 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 11925 - 11631
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctg-cactgcgagct 99  Q
    |||||||||||||||||||||| |   |||||||||||||| ||||||||||||||| ||||| |||  || |||||| || |||  | ||||| |  ||    
T  11925 acctctgataagtcggtcctcactggtagtttgcgtaccagtcaaagcaaacaccttcccaccagttctagtcttcttcgg-ttcaggacactgtgtact 11827  T
Q  100 aataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctca 199  Q
    |||| |||||||| |||  || || ||  | |  |  || | ||||||||  ||||||||  |||| || ||||| |||||||| || |||||| | |||    
T  11826 aatatgaccttctccattgcagttgtaacagacaatgtccccacgcttgctttcagctaaactgtgacccttctgaccacacctgaagcacttcctatca 11727  T
Q  200 tcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    || |   |||||||||||||||||||| |||| | |||||||||| | || |||||||||   || |||||||||||| | ||| |||| ||||||    
T  11726 tctcttccacatacattactcttgtggcctttcttaccacacttgtatcatacaatctcatctggtgcatctctcctcttgggcttcctatcatca 11631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 63701 - 63393
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||   | |||||||||||| | | |||||||| ||     
T  63701 acctctgataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacaccttgccacttgtcctaaccttcttaggctgcgtacactgcgaactg 63602  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| |||| | | || ||| |||  | ||| | | |||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  63601 atatgaccttcctcattatagttgtagcaaacaatatccccatgcttacaatcagctaaagtgtgtcctttctgaccacacctgaaacacttcttctcat 63502  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |||||||| ||||||||||||||| |||| ||||||||||||||||| ||||| ||| ||||||||||||||||| | |||||||||||||||||||     
T  63501 ctcggtcacaaacattactcttgtggcctttatcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaa 63402  T
Q  301 tctctgctt 309  Q
    ||| |||||    
T  63401 tctttgctt 63393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 3 - 309
Target Start/End: Original strand, 16761 - 17067
Alignment:
Q  3 ctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaat 102  Q
    |||||||||||||||||||||| ||||||||| |||||| ||| | ||| ||||||||||||||   | ||||||||| || | | |||||||| |||||    
T  16761 ctctgataagtcggtcctcattcacagtttgcataccagacaacgaaaataccttgccacctgtcctaaccttcttagtctgcgtacactgcgaactaat 16860  T
Q  103 aagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatca 202  Q
    | | ||||| |||| ||| || ||| |||  | ||| | ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||     
T  16861 atgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatct 16960  T
Q  203 cggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtc 302  Q
    || ||||| ||||||||||||||| |||| || |||||||||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||||     
T  16961 cgatcacacacattactcttgtggcctttctctccacacttgaaacaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtt 17060  T
Q  303 tctgctt 309  Q
    |||||||    
T  17061 tctgctt 17067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 42820 - 43118
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||| ||||||| |||||  |||||||||||||||||||||||   |  ||||||||| | | | |||||||| |||    
T  42820 acctctgataagtcggtcctcattaactgtttgcgcaccagtgaaagcaaacaccttgccacctgtcctaatcttcttaggttgcgtacactgcgaacta 42919  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||| ||| |||||| ||| |||  ||||| | ||||||  |||| ||||| |||||||||||||| | ||||||||| |||||||||||||    
T  42920 atatgaccttctgcattacaattgtagcaaacaacatccccacgcttaaaatccgctaaagtgtgtcctttctgactacacctaaagcacttcttctcat 43019  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    | |||||||| ||||||||||||||| |||| |||| |||||||||||| |  |||||| ||||||||||||||||| |||||||||||||||||||||    
T  43020 ctcggtcacaaacattactcttgtggcctttctcacaacacttgaaacaaattatctcagtaggagcatctctcctcttaggcctcctctcatcattca 43118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 19150094 - 19150402
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| ||||| || || |||||| |   |||||||||||| | | | |||||||| |||    
T  19150094 acctctgataagtcggtcctcattcacagtttgcgtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcgtacactgcgaacta 19150193  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | |||||||||| ||| || ||| |||  | ||| | ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||    
T  19150194 atatgtccttcttcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgat 19150293  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | || ||||| |||||||| |||||| |||| |||||||||||||| || ||||| ||| ||||||||||||||||| |||||||||||||||||||||     
T  19150294 ctcgatcacacacattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaa 19150393  T
Q  301 tctctgctt 309  Q
     ||||||||    
T  19150394 cctctgctt 19150402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 20749493 - 20749801
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| ||||| || || |||||| |   |||||||||||| | | | |||||||| |||    
T  20749493 acctctgataagtcggtcctcattcacagtttgcgtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcgtacactgcgaacta 20749592  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | |||||||||| ||| || ||| |||  | ||| | ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||    
T  20749593 atatgtccttcttcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgat 20749692  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | || ||||| |||||||| |||||| |||| |||||||||||||| || ||||| ||| ||||||||||||||||| |||||||||||||||||||||     
T  20749693 ctcgatcacacacattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaa 20749792  T
Q  301 tctctgctt 309  Q
     ||||||||    
T  20749793 cctctgctt 20749801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 12798667 - 12798362
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| || ||||||||||||| ||| ||||| ||||||||||||||   ||||||||||||||   | |||||||| ||     
T  12798667 acctctgataagtcggtcctcattcactgtttgcgtaccagtcaacgcaaaaaccttgccacctgtcctagccttcttaggctgtgtacactgcgaactg 12798568  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||||||| ||| || ||| |||  ||||| | |||||  ||||||||||| |||||||||||||| |||||||| || |||||||||||||    
T  12798567 atatgaccttcttcattacagttgtagcaaacaacatccccacgctcacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcat 12798468  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |||||||| ||||||||||||||| |||||   |||||||||||||| ||||| ||| || |||||||||||||| |  ||||||||||||||||||     
T  12798467 ctcggtcacaaacattactcttgtggcctttt---ccacacttgaaacaaacaatatcagtatgagcatctctcctcttgagcctcctctcatcattcaa 12798371  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  12798370 tctctgctt 12798362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 14261412 - 14261108
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| | |||||||||||||| ||| ||||| ||||||||||||||   | |||||||||||| | |  ||||||| |||    
T  14261412 acctctgataagtcggtcctcattcatagtttgcgtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgcataaactgcgaacta 14261313  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | ||||| |||| ||| || ||| |||  | ||| | ||||||||||||||| ||||||||||||||||| | |||||||||  ||||||||||||    
T  14261312 atatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgactacacctaaagtacttcttctcat 14261213  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | || | ||  ||||||||||||||| |||| |||||||||||||| || | ||||||| ||||||||| ||||| | ||||||||||||||||||||||    
T  14261212 ctcgatgacgcacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatatctccccttaggcctcctctcatcattcag 14261113  T
Q  301 tctct 305  Q
    |||||    
T  14261112 tctct 14261108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 12203966 - 12203668
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| ||||||||||| || |  ||||| | ||| ||||||||||| ||||||||  |||||||||||||||||||||| |||||||||    
T  12203966 acctctgataagtcgatcctcattaaccgtctatgtaccggtcaatgcaaacacctttccacctgtctgagccttcttaggcttcctgcattgcgagcta 12203867  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    | | |||||||||||||||||||  || |||  | ||||  ||||||||| |||||||  || || |||||||  ||||| |  || ||||| |||||||    
T  12203866 agatgaccttcttcatcacaattgaagcaaacaatatcatcacgcttgcattcagctatcgtatgccctttcttcccacatcagaagcactttttctcat 12203767  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||  | ||| ||||||||||||||| | || |||||||||||| | || |||||| ||  |||| ||||||||||| |||| ||||||||||||||||    
T  12203766 caccattacaaacattactcttgtggcccttctcaccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattca 12203668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 15099766 - 15099473
Alignment:
Q  4 tctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaata 103  Q
    |||||||||||||||||||||||| || ||| ||||||  |||||||||||||| ||||||||   | ||||||| |||| | | |||||||| || |||    
T  15099766 tctgataagtcggtcctcattaactgtctgcataccagttaaagcaaacaccttaccacctgtcctaaccttcttcggctgcgtacactgcgaactgata 15099667  T
Q  104 agaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcac 203  Q
     ||||||| ||||  || |||||  ||| ||  || | |||||| |||||| |||  |||||||| ||||| |||||||| || |||||||||||||| |    
T  15099666 tgaccttcctcattgcagttataacaaacgatgtccccacgcttacaatcatctagagtgtgtcccttctgaccacacctgaagcacttcttctcatctc 15099567  T
Q  204 ggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
      ||||| || |||||||||||| |||| |||||||||||||| || || || ||| ||||||||||||||||| | ||||||||| |||||||    
T  15099566 tatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggagcatctctcctcttgggcctcctcccatcatt 15099473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 14283540 - 14283232
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||| | ||||||||||  ||| |||||||||| |||||||||||| || ||||| |||  | ||||||| ||||    |||||| | |||     
T  14283540 acctctgataagacagtcctcattagtagtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtgggcactgtgtgctg 14283441  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||||| |  || |||||  | |  ||||||| |||||||||||||||||||||||| || ||||| |||||||| || |||||||||||||    
T  14283440 atatgaccctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcat 14283341  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| ||||||||||||||| |||| || ||||||||| |||| |||| ||||  |||||||||||||||    ||||||||||||||||| ||    
T  14283340 ccttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggagcatctctcctaacgggcctcctctcatcattgag 14283241  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  14283240 tctctgctt 14283232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 16947638 - 16947330
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| |||||||||  ||| |||||||| || ||||| |||  |||||||||  |||   | ||||| || ||     
T  16947638 acctctgataagtcggtcctcattagtagtctgcgtaccattcaatgcaaacactttcccaccggttctagccttcttcagctgaatacactgtgaactg 16947539  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||||| |  || || ||| |||  |  || | |||||| || ||||||| ||||||||||||||| |||||||||| ||||||| ||||||    
T  16947538 atatgaccctcttcgttgcagttgtagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaacacacttcctctcat 16947439  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |   ||||  |||||||||||||| ||||||||||||||||| |||| ||||| ||||  ||||||||||||||| | ||||| |||||||||||||     
T  16947438 ctctaccacaagcattactcttgtggcctttttcaccacacttgtaacaaacaatttcaactggagcatctctcctcttgggccttctctcatcattcat 16947339  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  16947338 tctctgctt 16947330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 143 - 299
Target Start/End: Original strand, 13676676 - 13676832
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||  |||||||||||||    ||||| ||||||||||||||| |||| | ||||||||    
T  13676676 cgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagtacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacact 13676775  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    || | || |||||||||| |||||||||||||||| | |||||||||||||||||||    
T  13676776 tgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattca 13676832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 11385595 - 11385294
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||| ||||||||||  ||| |||||||||| ||||||||||||||| ||||| |||  |  |||||| || |   ||||||| || ||     
T  11385595 acctctgataagtctgtcctcattagtagtctgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggttgagtgcactgtgaactg 11385496  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || || ||||||||||||||  |||  |||||||  | |||||| | ||| ||||||||||||||||| |||||||| || |||||||||||||    
T  11385495 atgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcat 11385396  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| |||||||| |||||| |||| || ||||||||  | || || ||||||  |||||||||||||||| | ||||| ||||||||||||||    
T  11385395 ctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaactatctcagcaggagcatctctcctcttgggccttctctcatcattcag 11385296  T
Q  301 tc 302  Q
    ||    
T  11385295 tc 11385294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 21755495 - 21755789
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||| |||||||||||||| || |||  | ||||||| ||||     ||||| ||||||    
T  21755495 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggctcaggacactgtgagcta 21755594  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||| |||  || || ||| | |  | ||| | |||||| || |||||||| ||||| || ||||| |||||||| ||||||||| ||||||    
T  21755595 atatgaccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaagtgtgacccttctgaccacacctgaaacacttcctctcat 21755694  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |     |||| ||||| ||||||||| ||||||||||||||||| |||| |||||||||   ||||||||||||||| |||||||| | ||||||    
T  21755695 ctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagagggagcatctctcctcttaggcctcatgtcatca 21755789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 142 - 309
Target Start/End: Original strand, 12459852 - 12460019
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| || |||||||  |||||||| ||||| |||||||||||||| ||| ||||||| |   ||||  |||| ||||||||| ||||||||||||||    
T  12459852 acgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacac 12459951  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    ||| ||||||||||||||  |||| ||||||||||| | |||||||| |||||||||| | |||||||    
T  12459952 ttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattcattttctgctt 12460019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 26115756 - 26115462
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctg-cactgcgagct 99  Q
    ||||||||| |||||||||||||||  ||| |||||||||| ||||||||||||||| ||||| |||  || |||||| || |||  | ||||| |  ||    
T  26115756 acctctgatgagtcggtcctcattaggagtgtgcgtaccagtcaaagcaaacacctttccaccagttctagtcttcttcgg-ttcaggacactgtgtact 26115658  T
Q  100 aataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctca 199  Q
    |||| |||||||| |||  ||||| ||  | |  |  || | ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | |||    
T  26115657 aatatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatca 26115558  T
Q  200 tcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    || |   |||| ||||||||||||||| |||| |||||||||||| |||| |||||||||   ||||||||||||||| | |||||||| ||||||    
T  26115557 tctcttccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagccggagcatctctcctcttgggcctcctatcatca 26115462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 26091964 - 26091670
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||| |||||  ||  || |||||| ||||     ||||| || ||     
T  26091964 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactg 26091865  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||  |||  || || ||  | |  |  || | ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||    
T  26091864 atatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcat 26091765  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    | |   |||| ||||||||||||||| |||| |||||||||||| | || |||||||||| |||||||||||||||| | |||||||| ||||||    
T  26091764 ctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 26091670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 295
Target Start/End: Complemental strand, 40924842 - 40924689
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||| |   |||| ||||||||||||||| |||| |||||||||    
T  40924842 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacac 40924743  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| | || |||||||||| |||||||||||||||| | |||||||| ||||||    
T  40924742 ttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 40924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 13024427 - 13024736
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||| |||||||| || ||||| ||   ||||||||| ||||   | ||||| || ||     
T  13024427 acctctgataagtcggtcctcatttgtagtctgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactgagaactg 13024526  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||||| |  || || ||| | |  |  || | |||||| || |||||||  |||||||||||||  |||||||| ||||| ||| ||||||    
T  13024527 atatgaccttcttcgttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtcctttctaaccacacctgaaacatttcctctcat 13024626  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
      |   || |  |||| || |||||| ||||||||||||||||| |||| ||||| |||  |||||||||||||||| | |||||||| ||||||||||     
T  13024627 atctaccataagcattgcttttgtggcctttttcaccacacttgtaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcat 13024726  T
Q  301 tctctgcttc 310  Q
     |||||||||    
T  13024727 cctctgcttc 13024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 18051119 - 18050811
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||| || |||||||||||| |||| || ||||||| ||||||||| || || |||||   |  | ||||||| ||||   ||||||| |  ||     
T  18051119 acctctgatgagacggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactg 18051020  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  |||| ||||||| |||||||||  | |  |||||||  ||||||||||| ||||   |||| || ||||||||||| || ||||||||||||||||    
T  18051019 atgtgaccctcttcattacaattataacatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcat 18050920  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| || |||||||||||  |||| || |||||||| || || || ||||||  ||||||||| ||| | || ||||||||||||||||| ||    
T  18050919 ccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaag 18050820  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  18050819 tctctgctt 18050811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 49155384 - 49155671
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||| |||||  ||  || |||||| ||||     ||||| || ||     
T  49155384 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactg 49155483  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||  |||  || || ||  | |  |  || | ||||||||| ||||||||  | || || ||||| |||||||| || |||||| | ||||    
T  49155484 atatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactatgacccttctgaccacacctgaagcacttcctatcat 49155583  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcct 288  Q
    | |   |||| ||||||||||||||| |||| |||||||||||| | || |||||||||| |||||||||||||||| | ||||||||    
T  49155584 ctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 49155671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 13965834 - 13965540
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||| ||||||||||| ||||| |||  ||||||||| ||||     ||||| || ||     
T  13965834 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttcccaccagttctagccttcttcggctcaggacactgtgaactg 13965735  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||| |||  ||||| ||| | |  | ||| | ||||||||| |||||||   |||| || ||||| |||||||| || || ||  | ||||    
T  13965734 atatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattcagctagactgtgacccttctgaccacacctgaagcattttctatcat 13965635  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |     |||| |||||||||||||||||||| |||||||||||| | ||  ||||||||  |||||||||||||||| | |||||||| ||||||    
T  13965634 ctttaccacaaacattactcttgtggtctttctcaccacacttgtagcaatcaatctcagcaggagcatctctcctcttgggcctcctatcatca 13965540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 309
Target Start/End: Original strand, 14144877 - 14145052
Alignment:
Q  134 acatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtcttttt 233  Q
    ||||||| ||||||||||||||||||   ||| || || || |||||||| || ||||||||||| ||   |  ||| || |||||||||||| |||| |    
T  14144877 acatcaccacgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtggcctttct 14144976  T
Q  234 caccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    | ||| |||| ||||| || ||||||  |||||||||||||||    ||||||||||||||||| |||||||||||    
T  14144977 cgccatacttaaaacaaactatctcagcaggagcatctctcctatatggcctcctctcatcattaagtctctgctt 14145052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 15114317 - 15114410
Alignment:
Q  34 cgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatag 127  Q
    |||||||| ||||||||| ||||| ||||| ||| | ||||||||||||||| |||||||||| |||||| |||||||||| | ||| ||||||    
T  15114317 cgtaccagtcaaagcaaaaaccttcccaccagtttgggccttcttaggcttcttgcactgcgaactaatatgaccttcttccttacagttatag 15114410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 15627619 - 15627721
Alignment:
Q  14 cggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttctt 113  Q
    ||||||||||| || ||||||||||||| |||||||||||| || ||||  ||| ||||||||||||||| | | |||||||| | |||| |||| ||||    
T  15627619 cggtcctcattcactgtttgcgtaccagtcaaagcaaacactttcccactagtttgagccttcttaggctactttcactgcgaaccaatatgaccctctt 15627718  T
Q  114 cat 116  Q
    |||    
T  15627719 cat 15627721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40924983 - 40924927
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacacctt 57  Q
    |||||||||||||||||||||||||  ||| |||||||||| |||||||||||||||    
T  40924983 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctt 40924927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 302
Target Start/End: Complemental strand, 12712694 - 12712528
Alignment:
Q  136 atcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttca 235  Q
    ||||| ||| ||||||||||||||   ||| || |||||||||||||| || ||||||||||||||   |  ||| |||||||| |||||| |||| ||     
T  12712694 atcaccacgtttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcg 12712595  T
Q  236 ccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtc 302  Q
    |||||||| || || || ||||||| |||||  ||||| | | | || || ||||||||||||||||    
T  12712594 ccacacttaaagcaaactatctcaacaggagtgtctcttcccttgggtcttctctcatcattcagtc 12712528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14140762 - 14140824
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    ||||||||||||||  |||||||||  ||| |||||||||| ||||||||| ||||| |||||    
T  14140762 acctctgataagtctttcctcattagtagtctgcgtaccagtcaaagcaaataccttcccacc 14140824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 9591657 - 9591754
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    ||||| ||||||||| |||| || ||||| |||||||||||||||||   |||||||||  || || |||||| ||| ||||||  || |||||||||    
T  9591657 acattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcaaccattctctgctt 9591754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15343514 - 15343567
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacac 54  Q
    |||||||||||| | ||||||||||  ||| |||||||||| ||||||||||||    
T  15343514 acctctgataagcctgtcctcattagtagtctgcgtaccagtcaaagcaaacac 15343567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 34459 - 34755
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||   | ||||||| |||| | | |||| ||| |||    
T  34459 acctctaataagtcggtcctcattaactgtttgcgtaccagtcaaggcaaacacctttccacctgtcctaaccttcttcggctgcgtacactacgaacta 34558  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  || |||||  |||  || || | |||||| |||||| ||||||||||||||||||  |||||||| || |||||||||||||    
T  34559 atatgaccttcctcattgcagttataacaaacaacgtccccacgcttacaatcaactaatgtgtgtcctttctaaccacacctgaagcacttcttctcat 34658  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    | |  ||||| ||||||||||||||| |||| ||||||||||||||||| ||||| ||| ||||||||||||||||| | |||||||||||||||||    
T  34659 ctctatcacagacattactcttgtggcctttctcaccacacttgaaacaaacaatgtcagtaggagcatctctcctcttgggcctcctctcatcatt 34755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 113; Significance: 3e-57; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 64784 - 64476
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||||||||||| || | ||| |||  | ||||||| || |   ||||||| || |||    
T  64784 acctctgataagacggtcctcattagtagtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaacta 64685  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||||||||||||| |||  ||||||| ||||||||||| ||||| ||||||||||||||| |||||||| ||||| ||||||||||    
T  64684 atatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcat 64585  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| ||||||||||||||| |||| || ||||||||| |||| || ||||||  ||||||||| |||||  | |||||||| |||||||||||    
T  64584 ccttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcag 64485  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  64484 tctctgctt 64476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 49362 - 49054
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||||||||||| || | ||| |||  | ||||||| || |   ||||||| || |||    
T  49362 acctctgataagacggtcctcattagtagtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaacta 49263  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||||||||||||| |||  ||||||| ||||||||||| ||||| ||||||||||||||| |||||||| ||||| ||||||||||    
T  49262 atatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcat 49163  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| ||||||||||||||| | || || ||||||||| |||| || ||||||  ||||||||| |||||  | |||||||| |||||||||||    
T  49162 ccttggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcag 49063  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  49062 tctctgctt 49054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 58396 - 58088
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||||||||||| || | ||| |||  | ||||||| || |   ||||||| || |||    
T  58396 acctctgataagacggtcctcattagtagtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaacta 58297  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||||||||||||| |||  ||||||| ||||||||||| ||||| ||||||||||||||| |||||||| ||||| ||||||||||    
T  58296 atatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcat 58197  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| ||||||||||||||| | || || ||||||||| |||| || ||||||  ||||||||| |||||  | |||||||| |||||||||||    
T  58196 ccttggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcag 58097  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  58096 tctctgctt 58088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 29746 - 30042
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||| || |||||||||| ||||||||||||||| ||||||||   | ||||||| || | | | |||||||| ||     
T  29746 acctctgataagtcggtcctcattaactgtctgcgtaccagtcaaagcaaacaccttaccacctgtcctaaccttcttcggttgcgtacactgcgaactg 29845  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  ||| ||||  ||| ||  || | || ||| ||||||||||  |||||||| || || |||||||| || |||||||||||||    
T  29846 atatgaccttcctcattgcaaatataacaaacgatgtccccacacttacaatcagctagagtgtgtcccttttgaccacacctgaagcacttcttctcat 29945  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    | |  ||||| || |||||||||||| |||| |||||||||||||| || || || ||| ||||| ||||||||||| | |||||||||||||||||    
T  29946 ctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggaacatctctcctcttgggcctcctctcatcatt 30042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 12082 - 12301
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||  || |||||||||||| | | ||||| || |||    
T  12082 acctctgataagtcggtcctcattcacagtttgcgtaccagtcaacgcaaataccttgccacctgtccgaaccttcttaggctgcgtacactgtgaacta 12181  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | |||||||||| ||| || ||| |||  | ||| | || |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  12182 atatgtccttcttcattacagttgtagcaaacaatatccccacacttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcat 12281  T
Q  201 cacggtcacatacattactc 220  Q
    | ||||||||||||||||||    
T  12282 ctcggtcacatacattactc 12301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 12326 - 12371
Alignment:
Q  261 taggagcatctctcctcctaggcctcctctcatcattcagtctctg 306  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||    
T  12326 taggagcatctctcctctaaggcctcctctcatcattcagcctctg 12371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 12853 - 13079
Alignment:
Q  5 ctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataa 104  Q
    ||||||||| |||||||||| || |||||||||||||  || ||||||||||||||||||||   | |||||||||||| | | |||||||| || |||     
T  12853 ctgataagttggtcctcattcaccgtttgcgtaccagttaacgcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactgatat 12952  T
Q  105 gaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacg 204  Q
    |||||||||||| ||| || ||| |||  ||||| | |||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||    
T  12953 gaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcgtcacg 13052  T
Q  205 gtcacatacattactcttgtggtcttt 231  Q
    |||||||||||||||||||||| ||||    
T  13053 gtcacatacattactcttgtggccttt 13079  T

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Target: chr5 (Bit Score: 101; Significance: 5e-50; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 23563529 - 23563237
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||   ||||||||||| | ||||||||||||||| ||||| ||   | ||||||| |||| | | |||||||| |||    
T  23563529 acctctgataagtcggtcctcattagttgtttgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgcgaacta 23563430  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  || |||||  |||     || | || ||| || ||||||| ||||||||||||||| |||||||| || |||||||||||||    
T  23563429 atatgaccttcctcattgcagttataacaaacattgtctccacccttacagtcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcat 23563330  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcat 293  Q
    | |  ||||| ||||||||||||||| ||||||||||||||||||| || ||||| ||| ||||||||||||||||| | |||||||||||||    
T  23563329 ctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaggagcatctctcctcttgggcctcctctcat 23563237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 21983538 - 21983229
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||| || |||||| ||| ||| ||||||||||| |||||||   |||||||||||||||||||||||||||| |||    
T  21983538 acctctgataagtcggtcctcattaactgtctgcgtaacagtcaatgcaaacacctttccacctgcctgagccttcttaggcttcctgcactgcgaacta 21983439  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    | | |||||||||| ||||||||  || |||  | ||||| ||||||||| || ||||  || || |||||||  ||||| |  || ||||| |||||||    
T  21983438 agatgaccttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattccgctatcgtatgccctttcttcccacatcggaagcactttttctcat 21983339  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |||  |  |  ||||||||||||||| | || ||||||||| |  | || |||||||||  |||| ||||||| ||| |||| ||||||||||||||||     
T  21983338 caccattgcgaacattactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaa 21983239  T
Q  301 tctctgcttc 310  Q
    ||| ||||||    
T  21983238 tctttgcttc 21983229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 21561386 - 21561088
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||| |||||||    |||||||||| |||||||||||||||| |||    
T  21561386 acctctgataagtcggtcctcattaactgtttgcataccagtcaatgcaaacacctttccacctgcctaagccttcttatgcttcctgcactgcgaacta 21561287  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    | | |||||||||| ||||||||  || |||  | ||||| || |||||| |  ||||  || || |||||||  ||||| |  || ||||| ||||||     
T  21561286 agatgaccttcttcgtcacaattgaagcaaacaatatcaccacacttgcatttcgctatcgtatgccctttcttcccacatcggaagcactttttctcaa 21561187  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||  |  |  ||||||||||||||| | || | |||||||||||| || |||||||||  |||| ||||||| ||| |||| ||||||||||||||||    
T  21561186 caccattgctaacattactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattca 21561088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 308
Target Start/End: Original strand, 23669670 - 23669946
Alignment:
Q  32 tgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaa 131  Q
    ||||||||||| |||||||||||| | |||| ||   ||||||||||||| ||| |||||||||||||||   |||||||||| ||||| ||  || |||    
T  23669670 tgcgtaccagctaaagcaaacacccttccacttgactgagccttcttaggattcttgcactgcgagctaaggtgaccttcttcgtcacatttgaagcaaa 23669769  T
Q  132 tgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtcttt 231  Q
      | ||||| ||||||||| |||||||  || || || |||| |||||| |  || ||||||||||| ||||  |  || ||||||||||||||| ||||    
T  23669770 caatatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggccttt 23669869  T
Q  232 ttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgct 308  Q
     |||||||||| | |  | |||||||||  |||||||||||||||| |||| |||||||||||||||| ||| ||||    
T  23669870 ctcaccacactggtaggaaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgct 23669946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 23078266 - 23077968
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| ||||||| || ||| |||||||| || ||||| ||   ||||||||| ||||   | ||||  || ||     
T  23078266 acctctgataagtcggtcctcattagtagtctgcgtactagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactatgaactg 23078167  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||||| |  || || ||| |||  |  || | |||||| || |||||||  |||||||||||||| |||||||| ||||| ||| ||||||    
T  23078166 atatgaccttcttcgttgcagttgtagcaaacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcat 23078067  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    | |   ||||  |||| || |||||| |||||||||||||||||||||| |||||||||  |||||||||||||||| | |||||||| ||||||||||    
T  23078066 ctctaccacaagcattgcttttgtggcctttttcaccacacttgaaacatacaatctcagcaggagcatctctcctcttgggcctcctatcatcattca 23077968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 306
Target Start/End: Complemental strand, 16258326 - 16258092
Alignment:
Q  72 ccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtccttt 171  Q
    |||||||||||||| |||||||||| |||| | ||||||| |||||||||||  |  |||  | ||||| ||||||||| ||||||| ||| || |||||    
T  16258326 ccttcttaggcttcttgcactgcgaactaagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgcccttt 16258227  T
Q  172 ctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatct 271  Q
    ||  ||||| |  || ||||||||||| ||||  |  || ||||||||||||||| | || |||||||||||| | || |||||||||  |||| |||||    
T  16258226 cttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatct 16258127  T
Q  272 ctcctcctaggcctcctctcatcattcagtctctg 306  Q
    |||||| |||| |||||||||||| ||| ||||||    
T  16258126 ctcctcttaggtctcctctcatcagtcaatctctg 16258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 203 - 309
Target Start/End: Complemental strand, 21870437 - 21870331
Alignment:
Q  203 cggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtc 302  Q
    |||||||| |||||||||||||||||||| |||||||||||||| || |  |||||| ||||||||||||||||| ||||||||||| ||||||||| |     
T  21870437 cggtcacaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatt 21870338  T
Q  303 tctgctt 309  Q
    |||||||    
T  21870337 tctgctt 21870331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 203 - 309
Target Start/End: Complemental strand, 21874717 - 21874611
Alignment:
Q  203 cggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtc 302  Q
    |||||||| |||||||||||||||||||| |||||||||||||| || |  |||||| ||||||||||||||||| ||||||||||| ||||||||| |     
T  21874717 cggtcacaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatt 21874618  T
Q  303 tctgctt 309  Q
    |||||||    
T  21874617 tctgctt 21874611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 306
Target Start/End: Complemental strand, 22592045 - 22591811
Alignment:
Q  72 ccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtccttt 171  Q
    |||||||||||||| |||||||||| |||| | ||||||| |||||||||||  |  |||  | ||||| ||||||||| ||||||| ||| || |||||    
T  22592045 ccttcttaggcttcttgcactgcgaactaagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgcccttt 22591946  T
Q  172 ctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatct 271  Q
    ||  || || |  || ||||||||||| ||||  |  || ||||||||||||||| | || |||||||||||| | || |||||||||  |||| |||||    
T  22591945 cttcccccatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatct 22591846  T
Q  272 ctcctcctaggcctcctctcatcattcagtctctg 306  Q
    |||||| |||| |||||||||||| ||| ||||||    
T  22591845 ctcctcttaggtctcctctcatcagtcaatctctg 22591811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 306
Target Start/End: Complemental strand, 22595600 - 22595366
Alignment:
Q  72 ccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtccttt 171  Q
    |||||||||||||| |||||||||| |||| | ||||||| |||||||||||  |  |||  | ||||| ||||||||| ||||||| ||| || |||||    
T  22595600 ccttcttaggcttcttgcactgcgaactaagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgcccttt 22595501  T
Q  172 ctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatct 271  Q
    ||  || || |  || ||||||||||| ||||  |  || ||||||||||||||| | || |||||||||||| | || |||||||||  |||| |||||    
T  22595500 cttcccccatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatct 22595401  T
Q  272 ctcctcctaggcctcctctcatcattcagtctctg 306  Q
    |||||| |||| |||||||||||| ||| ||||||    
T  22595400 ctcctcttaggtctcctctcatcagtcaatctctg 22595366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 309
Target Start/End: Complemental strand, 17266591 - 17266387
Alignment:
Q  105 gaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatca-c 203  Q
    |||| ||||||| |||||||||| | |  |||||||  ||||||||||| ||||   |||| || |||||||||||||| || ||||||||||||||  |    
T  17266591 gaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaagcacttcttctcatcctc 17266492  T
Q  204 ggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtct 303  Q
    ||| ||| || |||||||||||  |||| || |||||||| ||||| || ||||||  ||||||||| ||| | || ||||||||||||||||| |||||    
T  17266491 ggt-acaaacgttactcttgtgacctttctcgccacacttaaaacacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtct 17266393  T
Q  304 ctgctt 309  Q
    ||||||    
T  17266392 ctgctt 17266387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 299
Target Start/End: Original strand, 22505892 - 22505984
Alignment:
Q  207 cacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||| ||||| ||||||||| |||| |||||||||||| |||| |||||||||  |||||||||||||||| |||||||||| ||||||||||    
T  22505892 cacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 22505984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 20345289 - 20345583
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| ||||||||||  |||||||| ||||| ||||| |||  ||||||||| ||||     ||||| || |||    
T  20345289 acctctgataagtcggtcctcattggtagtctgcgtaccagttaaagcaaataccttcccaccagttctagccttcttcggctcaggacactgtgaacta 20345388  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||  |||  || || ||| | |  |  || | ||||||||| ||| |||   |||| || ||||| |||||||| || |||||| | ||||    
T  20345389 atatgaccttccccattgcagttgtagcagacaatgtccccacgcttgcattcaactagactgtgacccttctgaccacacctgaagcacttcctatcat 20345488  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |     |||| ||||||||||||||| |||| |||||||||||| |||| |||||||||  |||||||||||||||| | |||||||| ||||||    
T  20345489 ctttaccacaaacattactcttgtgggctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatca 20345583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 295
Target Start/End: Complemental strand, 14884211 - 14884058
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||| ||  |||| || ||||| |||||||| || |||||| | ||||| |   |||| ||||||||||||||| |||| |||||||||    
T  14884211 acgcttgcattcagccaaactgtgacccttctgaccacacctgaagcacttcctatcatctctcccacagacattactcttgtggcctttctcaccacac 14884112  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| |||| |||||||||   ||||||||||||||| | |||||||| ||||||    
T  14884111 ttgtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatca 14884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 25851079 - 25851373
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||| |||||||||||   ||| |||||||||| ||||||||| ||||| ||||| |||  ||||||||| ||||     ||||| || |||    
T  25851079 acctctgataagacggtcctcattggtagtctgcgtaccagtcaaagcaaataccttcccaccagttctagccttcttcggctcaggacactgtgaacta 25851178  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| ||| |||  || || ||| | |  |  || | ||||||| | |||||||   |||| || ||||| |||||||| || |||||| | ||||    
T  25851179 atatgaccctctccattgcagttgtagcagacaatgtctccacgcttgtattcagctagactgtgacccttctgaccacacctgaagcacttcctatcat 25851278  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |     |||| ||||||||||||||| |||| |||||||||||| | || |||||||||| | |||||||||||||| | |||||||| ||||||    
T  25851279 ctttaccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaagagcatctctcctcttgggcctcctatcatca 25851373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 21631747 - 21631645
Alignment:
Q  14 cggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttctt 113  Q
    ||||||||||| || || || ||||||| |||||||||||| || ||||  ||  ||||||||||||||||| |||||||||| | |||| |||||||||    
T  21631747 cggtcctcattcactgtctgtgtaccagtcaaagcaaacactttcccactagtctgagccttcttaggcttcttgcactgcgaaccaatatgaccttctt 21631648  T
Q  114 cat 116  Q
    |||    
T  21631647 cat 21631645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 308
Target Start/End: Original strand, 43122508 - 43122781
Alignment:
Q  35 gtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatga 134  Q
    |||||||| |||||||||||||||||||||||   | ||||||||||||   | ||||| || || | | | |||||||| ||||||||  || |||  |    
T  43122508 gtaccagctaaagcaaacaccttgccacctgtcctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcgtcacaattgaagcaaacaa 43122607  T
Q  135 catcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttc 234  Q
     ||||| ||||||||| |||||||  |  || || |||| |||||| |  || ||||||||||| ||||  |  || ||||||||||||||| |  | ||    
T  43122608 tatcaccacgcttgcattcagctatcgcatgccccttctttccacatcggaagcacttcttctcctcaccattgcagacattactcttgtggcccctctc 43122707  T
Q  235 accacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgct 308  Q
     ||||||||| | || ||||||||   | || ||||||||||| |||| |||||||||||||||| ||| ||||    
T  43122708 gccacacttgtagcaaacaatctctgcatgaacatctctcctcttaggtctcctctcatcattcaatctttgct 43122781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14884352 - 14884290
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    |||||||||||||||||||||||||  ||| |||||||||| |||||||||||| || |||||    
T  14884352 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacactttcccacc 14884290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 26735877 - 26735793
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    |||||||||| ||| |||| |||| |||  || | || |||||||||| |||||||||| || | ||||||||||||||||||||    
T  26735877 cattactcttatggcctttctcacaacaagtgtagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcatt 26735793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22505686 - 22505745
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgcc 60  Q
    |||| |||||||||||||||||||   ||| |||||||||| ||| ||||||||||||||    
T  22505686 acctttgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttgcc 22505745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 23526288 - 23526345
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatc 270  Q
    |||| ||||||||| |||| |||||||| || |||||||||||||||  |||||||||    
T  23526288 cattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 23526345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 1493 - 1188
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||| ||  ||| ||| | |||| ||| || ||||| || ||||||||   | ||||||||||||   | |||||||| ||     
T  1493 acctctgataagtcggtcctcactagtagtctgcatgccagtcaacgcgaacactttaccacctgtcctaaccttcttaggctgagtacactgcgaactg 1394  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  ||| | ||| |||  | ||| | |||||| || |||||||| |||||||||||||| |||||||| || |||||||||||||    
T  1393 atatgaccttcctcattgcaagtgtagcaaacaatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcat 1294  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |  |||||  |||||||||||||| |||||||||||||||||||||| |  |||||| ||||||||||||||||| | ||||||||||||||||||||    
T  1293 ctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcctcctctcatcattcag 1194  T
Q  301 tctctg 306  Q
     |||||    
T  1193 cctctg 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 7866 - 8171
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||| ||  ||| ||| | |||| ||| || ||||| || ||||||||   | ||||||||||||   | |||||||| ||     
T  7866 acctctgataagtcggtcctcactagtagtctgcatgccagtcaacgcgaacactttaccacctgtcctaaccttcttaggctgagtacactgcgaactg 7965  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  ||| | ||| |||  | ||| | |||||| || |||||||| |||||||||||||| |||||||| || |||||||||||||    
T  7966 atatgaccttcctcattgcaagtgtagcaaacaatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcat 8065  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |  |||||  |||||||||||||| |||||||||||||||||||||| |  |||||| ||||||||||||||||| | ||||||||||||||||||||    
T  8066 ctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcctcctctcatcattcag 8165  T
Q  301 tctctg 306  Q
     |||||    
T  8166 cctctg 8171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 137 - 309
Target Start/End: Complemental strand, 918 - 746
Alignment:
Q  137 tcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcac 236  Q
    |||| |||||| |||||||||| ||||||||||||||| |||||| | || |||||||||||||| |  ||||| ||||||||||||||| |||||||||    
T  918 tcaccacgcttacaatcagctagtgtgtgtcctttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcac 819  T
Q  237 cacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||||||||| || ||||| || |||||||||||||||||| | |||||||||||||||||||||| ||||||    
T  818 cacacttgaagcaaacaatatccataggagcatctctcctcttgggcctcctctcatcattcagtcgctgctt 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1059 - 997
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    |||||||||||||| ||||| | ||   ||||||||||||| ||||||||||||||| |||||    
T  1059 acctctgataagtctgtccttactagttgtttgcgtaccagtcaaagcaaacaccttaccacc 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 4271 - 3999
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||| ||    ||||| | ||| | ||||||||| |||| |||  |||||||||||||||||||| | |||||||||    
T  4271 acctctgataagtcggtcctcattaaccgtccatgtaccggtcaatgaaaacacctttccacttgtctgagccttcttaggcttcctggattgcgagcta 4172  T
Q  101 ataagaccttcttcatcacaattatagaaaatgaca---tcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttct 197  Q
    | | |||||||||||||||||||   ||||  ||||   || | | | ||||| ||||||| |||||||| |||||  ||||||   |||||| ||||||    
T  4171 agatgaccttcttcatcacaatt---gaaacagacaatgtctccatgtttgcactcagctattgtgtgtcttttcttcccacacaggaaacacatcttct 4075  T
Q  198 catcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctct 273  Q
    |||||||||||||||||||||||||||   | ||||||||| |||||||||||||||||||| |||||||||||||    
T  4074 catcacggtcacatacattactcttgtttcccttttcaccaaacttgaaacagacaatctcagtaggagcatctct 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 775 - 738
Alignment:
Q  268 atctctcctcctaggcctcctctcatcattcagtctct 305  Q
    |||||||||| |||||||||||||||||||||||||||    
T  775 atctctcctcttaggcctcctctcatcattcagtctct 738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 142 - 309
Target Start/End: Original strand, 153755 - 153922
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |  ||||| ||||||||||| |||  |||||||||||||    
T  153755 acgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttatggcttttttcaccacac 153854  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    ||||| || ||||||||| | ||||||||||||||| | |||||||||||||||||||||| ||||||    
T  153855 ttgaagcaaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcagtcgctgctt 153922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 7160 - 7468
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||   |||||||| ||||  | ||||||||| || ||||| ||   |  |||||| |||||| |||| |||||||||    
T  7160 acctctgataagtcgatcctcactagtggtttgcgtgccagttagagcaaacactttaccaccggtcctaatcttcttgggcttcttgcattgcgagcta 7259  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || ||||||||| | |||||  |||  ||||||| |||||||||||||||||  |||||||||||||| |||||||| || |||||||||||||    
T  7260 atatgcccctcttcatcatagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcat 7359  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |      ||| ||||||||||||||| |||| || ||||||||| |||| |||||||||  |||||||||||||||  | |||||||||||||||||||     
T  7360 ctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaa 7459  T
Q  301 tctctgctt 309  Q
     ||||||||    
T  7460 cctctgctt 7468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 1065 - 769
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||| ||||||||||   ||||||||||| | ||||||||||||||| ||||| ||   | ||||||| || | | | |||||||| ||     
T  1065 acctctgataagtctgtcctcattagttgtttgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgcgtacactgcgaactg 966  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  || |||||  |||  |  || | |||||| ||||||||||  |||| ||||||||| |||||||| || |||||||||||||    
T  965 atatgaccttcctcattgcagttataataaacaatgtccccacgcttacaatcagctagagtgtatcctttctgaccacacctgaagcacttcttctcat 866  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    | |  ||||| || |||||||||||| ||||||||||||||||||| || ||||||||  ||||||||||||||||| | |||||||||||||||||    
T  865 ctctatcacaaacgttactcttgtggcctttttcaccacacttgaagcaaacaatctcggtaggagcatctctcctcttgggcctcctctcatcatt 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 39515 - 39207
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||   ||||||||||||| || ||||||||| || ||||| ||   | ||||||| |  |   | |||||||| ||     
T  39515 acctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcgattgtgtacactgcgaactg 39416  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  || |||||| |||  ||||| |  ||||| |||| ||||||||||||||||||||| |||||||| || |||||||||||||    
T  39415 atacgaccttcctcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcat 39316  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |    ||||| ||||||||||||||| |||| |||||||||||| | || |||||||||  |||||||||||||||| | ||||||||||||||||||||    
T  39315 ctttatcacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 39216  T
Q  301 tctctgctt 309  Q
     ||||||||    
T  39215 cctctgctt 39207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 7e-43; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 19716736 - 19716428
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||| ||||||||||||||||| ||  ||| |||||||||| ||| |||||||| || ||||| |||  | ||||||| ||||   |||||||||| ||     
T  19716736 acctttgataagtcggtcctcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactg 19716637  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || ||||  |  || |||||  |||  ||||||| |||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||    
T  19716636 atatggccctctttgttgcagttataacaaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcat 19716537  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |      ||| ||||||||||||||| |||| || ||||||||| |||| || ||||||  |||||||||||||||  | |||||||||||||||||||     
T  19716536 ctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaa 19716437  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  19716436 tctctgctt 19716428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 19721299 - 19720991
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||| ||||||||||||||||| ||  ||| |||||||||| ||| |||||||| || ||||| |||  | ||||||| ||||   |||||||||| ||     
T  19721299 acctttgataagtcggtcctcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactg 19721200  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || ||||  |  || |||||  |||  ||||||| |||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||    
T  19721199 atatggccctctttgttgcagttataacaaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcat 19721100  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |      ||| ||||||||||||||| |||| || ||||||||| |||| || ||||||  |||||||||||||||  | |||||||||||||||||||     
T  19721099 ctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaa 19721000  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  19720999 tctctgctt 19720991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 35 - 308
Target Start/End: Original strand, 28350633 - 28350906
Alignment:
Q  35 gtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatga 134  Q
    |||||||  |||||||||||| | |||| ||   ||||||||||||||||| |||||||||| || | | |||||||||| ||||||||  || |||  |    
T  28350633 gtaccagataaagcaaacacccttccacttgcctgagccttcttaggcttcttgcactgcgaactgagatgaccttcttcgtcacaattgaagcaaacaa 28350732  T
Q  135 catcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttc 234  Q
     ||||| ||||||||| |||||||  || || |||||||  ||||| |  || ||||| ||||||||||  |  || ||||||||||||||| |||| ||    
T  28350733 tatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagcactttttctcatcaccattgcaaacattactcttgtggcctttctc 28350832  T
Q  235 accacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgct 308  Q
    |||||||||| | || |||||||||  |||| ||||||||||| |||| |||||||||||||||| ||| ||||    
T  28350833 accacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 28350906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 143 - 297
Target Start/End: Original strand, 23274459 - 23274613
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||      ||| ||||||||||||||| |||| ||||||||||    
T  23274459 cgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacact 23274558  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    ||   || ||||| ||| ||||||||||||||||| | |||||||||||||||||    
T  23274559 tgttgcaaacaatttcagtaggagcatctctcctcttgggcctcctctcatcatt 23274613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 23097737 - 23097436
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||| ||||| | ||||||||||  ||| |||||||||| ||||||||||||||| ||||| |||  |  |||||| ||||   ||||||| || ||     
T  23097737 acctcttataagcctgtcctcattagtagtctgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggctgagtgcactgtgaactg 23097638  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || || ||||||||||||||  |||  |||||||  | |||||| | ||| ||||||||||||||||| |||||| | || |||||||||| ||    
T  23097637 atgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacttgaagcacttcttctgat 23097538  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| |||||||| |||||| |||| || |||||||| || || || ||||||  |||||||||||||||| | ||||||||||||||||||||    
T  23097537 ctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 23097438  T
Q  301 tc 302  Q
    ||    
T  23097437 tc 23097436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 12577077 - 12577385
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||| || |||||||||||| |||| || ||||||| ||||||||| || || |||||   |  | ||||||| ||||   ||||||| |  ||     
T  12577077 acctctgatgaggcggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactg 12577176  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  |||| ||||||| |||||||||| | |  |||||||  ||||||||||| ||||   |||| || ||||||||||| || ||||||||||||||||    
T  12577177 atgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcat 12577276  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| || |||||||||||  |||| || |||||||| || || || ||||||  ||||||||| ||| | || ||||||||||||||||| ||    
T  12577277 ccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaag 12577376  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  12577377 tctctgctt 12577385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 306
Target Start/End: Original strand, 21901366 - 21901566
Alignment:
Q  106 accttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacgg 205  Q
    ||||||||| ||||||||  || |||  | ||||| ||||||||| |||||||  || || |||||||  ||||| |  || ||||| ||||||||||      
T  21901366 accttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagcactttttctcatcacca 21901465  T
Q  206 tcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctct 305  Q
    |  || ||||||||||||||| | || |||||||||||| | || ||||||||| ||||| ||||||| ||| |||| |||||||||||||||| |||||    
T  21901466 ttgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctct 21901565  T
Q  306 g 306  Q
    |    
T  21901566 g 21901566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 23113447 - 23113568
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||| |||||||||| |||||| |||| |  || || |||| ||| ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  23113447 acctttgataagtcg-tcctcaataactgcctgtgttccagtcaatgcaaacacctttccacctgtctgagccttcttaggcttcctgcactgcgagcta 23113545  T
Q  101 ataagaccttcttcatcacaatt 123  Q
    | | |||||| ||| ||||||||    
T  23113546 agatgaccttattcgtcacaatt 23113568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 20848313 - 20848588
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||| |||||  ||  || |||||| ||||     ||||| || ||     
T  20848313 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactg 20848412  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||  |||  || || ||  | |  |  || | ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||    
T  20848413 atatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcat 20848512  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctc 277  Q
    | |   |||| ||||||||||||||| |||| |||||||||||| | || |||||||||| ||||||||||||||||    
T  20848513 ctcttccacaaacattactcttgtggcctttctcaccacacttgtagca-acaatctcaacaggagcatctctcctc 20848588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 11351219 - 11351173
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctc 258  Q
    ||||| ||||||||| |||| |||||||| |||||||||||||||||    
T  11351219 acattgctcttgtggcctttctcaccacaattgaaacagacaatctc 11351173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 22462989 - 22462943
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctc 258  Q
    ||||||||||||||| |||| |||||||| |||||||| ||||||||    
T  22462989 acattactcttgtggcctttctcaccacagttgaaacaaacaatctc 22462943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 142 - 297
Target Start/End: Original strand, 6068 - 6223
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||||||||||| ||||||||||||||| ||||| || || |||||||||||||| |  ||||| ||||||||||||||| ||||||||||||||    
T  6068 acgcttgcaatcagctagtgtgtgtcctttctgaccacatctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacac 6167  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    ||||| || ||||| ||| || |||||||||||||| | |||||||||||||||||    
T  6168 ttgaagcaaacaatgtcagtaagagcatctctcctcttgggcctcctctcatcatt 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 997 - 688
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||| ||||||||| ||||||||||   ||||||||||| | ||||||||||||||| ||||| ||   | ||||||| |||| | | |||||||| ||     
T  997 acctttgataagtctgtcctcattagttgtttgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttctttggctgcgtacactgcgaactg 898  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | ||||| || |  || |||||  |||  |  || | |||||| |||||||||| ||||||||| ||||| |||||||| || |||||||||||||    
T  897 atatgtccttcctcgttgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcat 798  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    | |  ||||| ||||||||||||||| ||||||||||||||||||| ||  |||| ||  ||||||||||||||||| | ||||||||||||||||| |     
T  797 ctctatcacaaacattactcttgtggcctttttcaccacacttgaagcaatcaatgtccgtaggagcatctctcctcttgggcctcctctcatcatttaa 698  T
Q  301 tctctgcttc 310  Q
     |||||||||    
T  697 cctctgcttc 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 325829 - 326136
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||   ||||||||||||| |||||||||||| || ||||| |||  | ||||||| || |   ||||||| || ||     
T  325829 acctctgataagtcgatcctcactagtggtttgcgtaccagtcaaagcaaacactttaccaccggttctaaccttctttggttgtgtgcactgtgaactg 325928  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||  || |||||  |||  ||||| |  ||||| |||| ||||||||||||||||||||| |||||| | || |||||||||||||    
T  325929 atatggccctcttcattgcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacttgaagcacttcttctcat 326028  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |    ||||| |||||||||||||||||||| || ||||||||| | || |||||||||  |||||||||||||||  | ||||||||||||||||||||    
T  326029 ctttatcacagacattactcttgtggtctttctcgccacacttgtagcaaacaatctcagcaggagcatctctcct-attggcctcctctcatcattcag 326127  T
Q  301 tctctgctt 309  Q
     ||||||||    
T  326128 cctctgctt 326136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 143 - 309
Target Start/End: Original strand, 319507 - 319673
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||||||    ||||| ||||||||||||||| |||| || |||||||    
T  319507 cgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttctcgccacact 319606  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    || | || |||||| ||  |||||||||||||||  | |||||||||||||||||||| ||||||||    
T  319607 tgtagcaaacaatcccagcaggagcatctctcctattgggcctcctctcatcattcagcctctgctt 319673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 200650 - 200361
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||||| || |||||||||| ||         |||| |||||||   || || ||||||||||| |||||||||| |||    
T  200650 acctctgataagtcggtcctcattaaccgtctgcgtaccagtca---------cctttccacctgcctgaaccctcttaggcttcttgcactgcgaacta 200560  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    | | |||||||||| ||||||||  || |||  | ||||| ||||||||| || ||||  || || |||||||  ||||| |  || |||||||||||||    
T  200559 agatgaccttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattccgctatcgtatgccctttcttcccacatcggaagcacttcttctcat 200460  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||  |  || ||||||||||||||| | || |||||||||||| | || ||||||||| ||||| | ||||| ||| |||| ||||||||||||||||    
T  200459 caccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcattaggaacttctcttctcttaggtctcctctcatcattca 200361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 265
Target Start/End: Original strand, 11952 - 12214
Alignment:
Q  3 ctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaat 102  Q
    |||| |||||||||||||||||||  || |||||||||| ||| ||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||     
T  11952 ctctaataagtcggtcctcattaattgtctgcgtaccagtcaatgcaaacacctttccacctgtctgagccttcttaggcttcctgcactgcgaactaag 12051  T
Q  103 aagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatca 202  Q
    | |||||||||| ||||||||  || |||  | ||||| ||||||||| || ||||  || || |||||||  ||||| | ||| ||||| |||||||||    
T  12052 atgaccttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattccgctatcgtatgccctttcttcccacatcgaaagcactttttctcatca 12151  T
Q  203 cggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaatagga 265  Q
    |  |  ||  |||||||||||||| | || |||||||||||| | || ||||||||| |||||    
T  12152 ccattgcaagcattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtagga 12214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 4074 - 3776
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||| |||||||||||||||||||| || || ||||| | ||| ||||||||||| ||||||||  ||||||||||||||||| |||| |||||| ||    
T  4074 acctcttataagtcggtcctcattaaccgtctgtgtaccggtcaatgcaaacacctttccacctgtctgagccttcttaggcttcatgcattgcgagtta 3975  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    | | ||||||||| |||||||||  || |||  | ||||| ||||||||| |||||||  |  || || |||| |||||| |  || ||||||||||| |    
T  3974 agatgaccttctttatcacaattgaagtaaacaatatcaccacgcttgcattcagctatcgcatgccccttctttccacatcggaagcacttcttctcct 3875  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||  |  || ||||||||||||||| |  | || ||||||||| | || |||||||||| || | ||||||||||| |||| ||||||||||||||||    
T  3874 caccattgcagacattactcttgtggcccctctcgccacacttgtagcaaacaatctcaacagaaacatctctcctcttaggtctcctctcatcattca 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 4501 - 4339
Alignment:
Q  135 catcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttc 234  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||| || || ||||||||||| |  ||||| ||||||||||| ||| |||| ||    
T  4501 catcaccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctc 4402  T
Q  235 accacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
     ||||||||||| || ||||| ||| ||||||||||||||||| | |||||||||||||||||    
T  4401 gccacacttgaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatt 4339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 143 - 299
Target Start/End: Original strand, 2895 - 3051
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||  |||||||||||||    ||||| ||||||||||||||| |||| | ||||||||    
T  2895 cgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagaacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacact 2994  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    || | || |||||||||| |||||||||||||||| | |||||||||||||||||||    
T  2995 tgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattca 3051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 81; Significance: 4e-38; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 137 - 309
Target Start/End: Complemental strand, 11952 - 11780
Alignment:
Q  137 tcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcac 236  Q
    |||| |||||||||||||||||  |||||||||||||| |||||||| || ||||||||||||||      ||| ||||||||||||||| |||| || |    
T  11952 tcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgc 11853  T
Q  237 cacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||||||| |||| || |||||| ||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  11852 cacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcctcctctcatcattaagtctctgctt 11780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 1992 - 1829
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| |||||||||||||||||||||||||| |||||||| || ||||||||||||||    ||||| ||||||||||||||| |||| ||||||||||    
T  1992 cgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacact 1893  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctg 306  Q
    || | || ||||| |||  |||||||||| ||||| | |||||||||||||||||||| |||||    
T  1892 tgtagcaaacaatttcagcaggagcatctatcctcttgggcctcctctcatcattcagcctctg 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 299
Target Start/End: Original strand, 70705 - 70792
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    ||||||| ||||||| ||||  ||||||||||| |||| ||||  |||| |||||||||||||| |||||||| ||||||||||||||    
T  70705 acattacccttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggccgcctctcatcattca 70792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 143 - 309
Target Start/End: Complemental strand, 5249 - 5083
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| ||||||||||| |||||||| ||||| |||||||| || ||||||||||||||    ||||| ||||||||||||||| ||||||| |||||||    
T  5249 cgcttacaatcagctaaagtgtgtcccttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcctttttcgccacact 5150  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    || | || |||||||||  ||||||||||||||||||||||| |||||||| |||||| || |||||    
T  5149 tgtagcaaacaatctcagcaggagcatctctcctcctaggccacctctcattattcagcctttgctt 5083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 11099 - 11397
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||| || || ||   ||||||||| ||||   | ||||| |||||     
T  11099 acctctgataagtcggtcctcattaatagtctgcgtaccagtcaacgcaaacaccttccctccggtcctagccttcttcggctgagtacactgtgagctg 11198  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| |||||||  || || ||| | |  |  || | |||||| || ||||||| || |||||| ||||| |||||||| || |||||| ||||||    
T  11199 atatgaccctcttcattgcagttgtagcagacaatgtccccacgcttacattcagctagtgcgtgtcccttctgaccacacctgaagcacttcctctcat 11298  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    | |   ||||  |||| ||||||||| ||||||||||||||||| |||| |||||||||  |||||||||||||||| |||| ||||| ||||||||||    
T  11299 ctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggactcctatcatcattca 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 444 - 170
Alignment:
Q  23 ttaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaat 122  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||   | ||||||| || | | | || ||||| |||||| ||||||| ||||  || |    
T  444 ttaactgtttgcgtaccagtcaaagcaaacaccttgccaccggtcctaaccttcttcggttgcgtacattgcgaactaatatgaccttcctcattgcagt 345  T
Q  123 tatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactctt 222  Q
    ||||  |||  |  || | |||||| |||||||||| |||||||| |||||| |||||| | || |||||||||||||| |  ||||| |||||||||||    
T  344 tataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcttttctgaccacacatgaagcacttcttctcatctctatcacagacattactctt 245  T
Q  223 gtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    |||| |||| || ||||||||||| || ||||| ||| ||||||| ||||| ||| | |||||||||||||||||    
T  244 gtggcctttctcgccacacttgaagcaaacaatatcagtaggagcctctctgctcttgggcctcctctcatcatt 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 669 - 361
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| || ||||||| ||| |||||||| || ||| | |||  | ||||||| ||||   ||||||| || ||     
T  669 acctctgataagtcggtcctcattagtagtctgtgtaccagtcaatgcaaacactttcccatcggttctaaccttcttcggctgtgtgcactgtgaactg 570  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||  || |||||| |||  ||||||| |||||||||||||||||   ||||||||||||| |||||||| ||||||||||||||||    
T  569 atatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatcagctaggctgtgtcctttctgaccacacctgaaacacttcttctcat 470  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| |||| |||||||||| ||||    ||||| ||| |||| || ||||||  |||||||||||||||  | |||||||||||||||||||     
T  469 ccttggtacaaacatcactcttgtggcctttcctgccacatttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaa 370  T
Q  301 tctctgctt 309  Q
    | |||||||    
T  369 tatctgctt 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 21078 - 21241
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| |||||| ||||||||||||| |||||||||||||| || |||||||||||| |      ||| ||||||||||||||| |||| ||||||||||    
T  21078 cgcttacaatcaactaatgtgtgtcccttctgtccacacctgaagcacttcttctcacctttagtacaaacattactcttgtggcctttctcaccacact 21177  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctg 306  Q
    || | || |||||||||  || ||||||||||||| | |||||||||||||||||||| |||||    
T  21178 tgtagcaaacaatctcagcagaagcatctctcctcttgggcctcctctcatcattcagcctctg 21241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 37061 - 37369
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||| ||||||||| ||| ||||||   ||||||||||| | ||||| ||||||||| ||||| ||   | ||||||| |||| | | ||||| || ||     
T  37061 acctatgataagtctgtcttcattagttgtttgcgtaccggtcaaagaaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactg 37160  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||| ||||  || |||||| |||  | ||| | || ||| |||||||||| ||||||||| ||||| |||||||| || |||||||||||||    
T  37161 atatgaccttcctcattgcagttatagcaaacaatatccccacacttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcat 37260  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |    ||||| ||||||||||||||| |||| || ||||||||||| || | ||| ||| ||||||  ||||||||| | |||||||||||||||||||     
T  37261 ctttatcacaaacattactcttgtggcctttctcgccacacttgaagcaaaaaatatcagtaggagtgtctctcctcttgggcctcctctcatcattcaa 37360  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  37361 tctctgctt 37369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 143 - 309
Target Start/End: Complemental strand, 9061 - 8895
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||||||    ||||| |||||||||||||||  ||| ||||||||||    
T  9061 cgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcttttctcaccacact 8962  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    || | || ||||||| |  || ||||||||||||| | |||||||||||||||||||| ||||||||    
T  8961 tgtagcaaacaatcttagcagaagcatctctcctcttgggcctcctctcatcattcagcctctgctt 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 22244 - 22546
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| || ||||||| ||| ||||||||  | ||| | |||  | ||||||| ||||   ||||||| || ||     
T  22244 acctctgataagtcggtcctcattagtagtctgagtaccagtcaatgcaaacactataccaacggttctaaccttcttcggctgtgtgcactgagaactg 22343  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || |||||||  || |||||| |||  ||||||| ||||||||||||| |||  |||||||||||||| |||||| | || || ||||||||||    
T  22344 atatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatcaactagggtgtgtcctttctgaccacacttgaagcatttcttctcat 22443  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |      | | ||||||||||||||| |||| || ||||||||| |||| || ||||||| |||||||||||||||  | ||||||||||||||||||||    
T  22444 ccttagtaaaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcaacaggagcatctctcctattgggcctcctctcatcattcag 22543  T
Q  301 tct 303  Q
    |||    
T  22544 tct 22546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 5888 - 5776
Alignment:
Q  197 tcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcat 296  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||||||| || | ||||| ||| ||||||||||||||||| | ||||||||||||||||    
T  5888 tcatctcggtcacaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcat 5789  T
Q  297 tcagtctctgctt 309  Q
    |||||||||||||    
T  5788 tcagtctctgctt 5776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 8644 - 8336
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||  ||| |||||||||| ||| |||||||| || ||||| |||  | ||||||| || |   |||||||||| ||     
T  8644 acctctgataagtcgatcctcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactg 8545  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || | |||||  || |||||  |||  || |||| |||||||||||||||||  |||||||| ||||| |||||||| ||||||||||||||||    
T  8544 atatggccctattcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcat 8445  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |      ||| ||||||||||||||| | || || ||||||||  |||| ||||| |||| | |||||||||||||| | || |||||||||||||||||    
T  8444 ccttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcag 8345  T
Q  301 tctctgctt 309  Q
     ||||||||    
T  8344 cctctgctt 8336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 18858 - 18550
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||  ||| |||||||||| ||| |||||||| || ||||| |||  | ||||||| || |   |||||||||| ||     
T  18858 acctctgataagtcgatcctcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactg 18759  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || | |||||  || |||||  |||  || |||| |||||||||||||||||  |||||||| ||||| |||||||| ||||||||||||||||    
T  18758 atatggccctattcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcat 18659  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |      ||| ||||||||||||||| | || || ||||||||  |||| ||||| |||| | |||||||||||||| | || |||||||||||||||||    
T  18658 ccttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcag 18559  T
Q  301 tctctgctt 309  Q
     ||||||||    
T  18558 cctctgctt 18550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 115934 - 116050
Alignment:
Q  189 acttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcct 288  Q
    ||||||||||||| |  ||||| ||||||||||||||| |||||||||||||| ||||||| ||||| ||| |||||||||| |||||| ||||||||||    
T  115934 acttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcct 116033  T
Q  289 ctcatcattcagtctct 305  Q
    |||||||||||||||||    
T  116034 ctcatcattcagtctct 116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 309
Target Start/End: Complemental strand, 4898 - 4723
Alignment:
Q  134 acatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtcttttt 233  Q
    ||||||| ||||||||||||||||||  |||| || |||||||||||||| || ||||||||||||||   |  ||| ||||||||||||||| |||| |    
T  4898 acatcaccacgcttgcaatcagctaacatgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttct 4799  T
Q  234 caccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
      ||||||||  ||||||| ||||||  |||||||||||||||  | ||||||||||||||||||||||| |||||    
T  4798 ggccacacttataacagactatctcagcaggagcatctctcctatttggcctcctctcatcattcagtctttgctt 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 17533 - 17364
Alignment:
Q  134 acatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtcttttt 233  Q
    ||||||| |||| || |||| ||||||||||| || || ||  |||||||||| ||||||||||||||   |  ||| ||||||||||||||| |||| |    
T  17533 acatcaccacgcatgtaatccgctaatgtgtgacccttttgatcacacctaaagcacttcttctcatccttggtacaaacattactcttgtggcctttct 17434  T
Q  234 caccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtct 303  Q
    | ||||||||  |||| || ||||||  |||||||||||||||  | |||||||||||||||||||||||    
T  17433 cgccacacttataacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtct 17364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17666 - 17614
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaaca 53  Q
    |||||||||||| || |||||||||  ||| |||||||||| |||||||||||    
T  17666 acctctgataagacgatcctcattagtagtctgcgtaccagtcaaagcaaaca 17614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 164583 - 164285
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||| ||  ||| | |||||| | ||| |||||||| || ||||| |||  | ||||||| ||||   |  | ||||| ||     
T  164583 acctctgataagtcggtcctcactagtagtctacgtaccggtcaatgcaaacactttcccaccggttctaaccttcttcggctgagtataatgcgaactg 164484  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | ||||||||||  || |||||  |||  |||| || ||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||    
T  164483 atatggccttcttcattgcagttataacaaacaacattaccacgcttgcaatcaactaaagtgtgtcctttctgaccacacctgaaacacttcttctcat 164384  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |      ||| ||||||||||||||| |||| || ||||||||| |||| || ||||||  |||||| ||||||||  | |||||||||||||||||||    
T  164383 ccttagaacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcgtctctcctattgggcctcctctcatcattca 164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 30544 - 30487
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatc 270  Q
    |||| ||||||||| |||| |||||||| || |||||||||||||||  |||||||||    
T  30544 cattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 30487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 8736 - 9045
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||  ||| |||||||||| ||| |||||||| || ||||| ||   | ||||||| || |   |||||||||| ||     
T  8736 acctctgataagtcgatcctcactagtagtatgcgtaccagtcaatgcaaacactttcccaccggtactaaccttcttcggttgagtgcactgcgaactg 8835  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | |||||||| |  || || ||| |||  |  |||| |||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||    
T  8836 atatggccttcttcgttgcagttgtagcaaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcat 8935  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |      ||| ||||||||||||||| | || || ||||||||  |||| |||||||||  |||||||||||||||| | || || ||||||||||||||    
T  8936 ctttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatctcatcaggagcatctctcctcttgggtcttctctcatcattcag 9035  T
Q  301 tctctgcttc 310  Q
      ||||||||    
T  9036 cttctgcttc 9045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 299
Target Start/End: Original strand, 251882 - 252039
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| || ||||||| ||||||||||||||| |||||||||||||| ||| ||||||| |   ||||  |||  || |||||| ||||||||||||||    
T  251882 acgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacatttcctctcatctctaccacaagcatagcttttgtggcctttttcaccacac 251981  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||||||| |||||||||| | |||||||||||||| | |||||||| ||||||||||    
T  251982 ttgaaacacacaatctcaacaagagcatctctcctcttgggcctcctatcatcattca 252039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 150 - 297
Target Start/End: Complemental strand, 575 - 428
Alignment:
Q  150 aatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaaca 249  Q
    |||| |||||||||||||||||||| |||||||| || ||||||||||||||    ||||| ||| |||| |||||| |||| || ||||||||||||||    
T  575 aatctgctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaaca 476  T
Q  250 gacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
     ||||| || |||||||||||||||||| | ||||| |||||||||||    
T  475 aacaatatctataggagcatctctcctcttgggccttctctcatcatt 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 1669 - 1371
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||||||||||||||||  ||| |||||||||| ||| |||||||| || || || ||     ||||||| ||||   | |||||||| ||     
T  1669 acctctgataagtcggtcctcattagtagtctgcgtaccagtcaatgcaaacactttccctccggtcctgaccttcttcggctgagtacactgcgaactg 1570  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| ||||||||||||  || || ||| |||  |  || | || ||| || |||||||  |||||||| ||||  |||||||||||||| ||| || |||    
T  1569 atatgaccttcttcattgcagttgtagcaaacaatgtccccacacttacattcagctagggtgtgtcccttctaaccacacctaaaacatttcctcacat 1470  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    | |   ||||  |||| ||||||||| ||||||||||||||||| ||||||||||||||  |||||||||||||||| | |||||||| ||||||||||    
T  1469 ctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggagcatctctcctcttgggcctcctatcatcattca 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 35 - 308
Target Start/End: Original strand, 1095 - 1368
Alignment:
Q  35 gtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatga 134  Q
    |||||||| |||||||||||| | |||| ||   ||||||||||||||||| | ||||| || || | | |||||| ||| ||||||||  || |||  |    
T  1095 gtaccagctaaagcaaacacccttccacttgcctgagccttcttaggcttcttacactgtgaactgagatgaccttattcgtcacaattgaagcaaacaa 1194  T
Q  135 catcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttc 234  Q
     ||||| ||||||||| |||||||  || || || |||| |||||| |  || ||||||||||| ||||  |  || ||||||||||||||| | || ||    
T  1195 tatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctc 1294  T
Q  235 accacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgct 308  Q
    |||||||||| |||| ||||||||| ||||| |||| || ||| |||| |||||||||||||||| ||||||||    
T  1295 accacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgct 1368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 7911 - 7986
Alignment:
Q  233 tcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgct 308  Q
    |||||||||||| |||| ||||||||| ||||| |||| || ||| |||| |||||||||||||||| ||||||||    
T  7911 tcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgct 7986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 299
Target Start/End: Original strand, 5317 - 5473
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| |||| ||||||||||||||||||||  |||||||| || ||||||||||||||    ||||| ||||||||| ||||| |||| || || ||||    
T  5317 cgcttacaattagctaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctttatcacagacattactcctgtggcctttctcgccgcact 5416  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    || | || |||||||||  |||||||||||||||| | |||||||||||||||||||    
T  5417 tgtagcaaacaatctcagcaggagcatctctcctcgtgggcctcctctcatcattca 5473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 295
Target Start/End: Complemental strand, 1648 - 1495
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  ||||||| ||||| |||||||| || |||||| |||||||     |||| ||||||||||||||  |||| |||||||||    
T  1648 acgcttgcattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtgtcctttctcaccacac 1549  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| |||| |||||||||  |||||||||||||||| |||||||||| ||||||    
T  1548 ttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatca 1495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1789 - 1730
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgcc 60  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||| |||||||| |||||    
T  1789 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacactttgcc 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 295
Target Start/End: Complemental strand, 23964 - 23811
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||| |   |||||||||||||||||||| |||| |||||||||    
T  23964 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttctcaccacac 23865  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| | || |||||||||| |||||||||||||||| | |||||||| ||||||    
T  23864 ttgtatcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 23811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 143 - 299
Target Start/End: Complemental strand, 9812 - 9656
Alignment:
Q  143 cgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacact 242  Q
    ||||| |||||| |||  |||||||||||||| |||||||| || ||||||||||||||    ||||| ||||||||||||||| | || ||||||||||    
T  9812 cgcttacaatcaactagggtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcccttctcaccacact 9713  T
Q  243 tgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    || | || ||||| |||  |||||||||||||||  | |||||||||||||||||||    
T  9712 tgtagcaaacaatatcagcaggagcatctctcctgtttggcctcctctcatcattca 9656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 40180 - 40488
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||| ||||| |||||||||||   ||| |||||||||| |||||||||||| || ||||| |||  | ||||||| ||||   ||||||| |  ||     
T  40180 acctctaataagacggtcctcattggtagtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgagtactg 40279  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || ||||| |  || |||||  | |  ||||||| |||||||||||| |||||  |||| || ||||  |||||||| || |||||||| ||||    
T  40280 atatggccctcttcgttgcagttataacatacaacatcacaacgcttgcaatccgctaacatgtgacccttctaaccacacctgaagcacttcttatcat 40379  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| ||||||||||||||| |||| || ||||||||  ||||||| ||||||  |||||||||||||||  | ||||||||||||||||||||    
T  40380 ctttggtacaaacattactcttgtggcctttctcgccacacttataacagactatctcagcaggagcatctctcctattcggcctcctctcatcattcag 40479  T
Q  301 tctctgctt 309  Q
    ||| |||||    
T  40480 tctttgctt 40488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 727 - 428
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||   ||||||||||  ||| |||||||||| ||| |||||||| || ||||| |||  |  |||||| ||||   ||||||| || ||     
T  727 acctctgataagcttgtcctcattagtagtctgcgtaccagtcaacgcaaacactttcccaccggttctaatcttctttggctgagtgcactgtgaactg 628  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || || ||||||||||||||  |||  ||||||   | |||||| | ||| ||||||||||||||||| |||||||| || |||||||||||||    
T  627 atgtggccctcctcatcacaattataacaaacaacatcattcctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcat 528  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| |||||||| |||||| |||| || |||||||| || || || |||||| ||||||||||||||||| | || || ||||||||||||||    
T  527 ctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagtaggagcatctctcctcttgggtcttctctcatcattcag 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 801 - 934
Alignment:
Q  176 ccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcc 275  Q
    |||||||| ||  |||||||||||||    ||||| ||||||||||||||| |||| |  ||||||||| | || |||||||||  ||||||||||||||    
T  801 ccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctctcc 900  T
Q  276 tcctaggcctcctctcatcattcagtctctgctt 309  Q
    || ||||||||||||||||||||| |||||||||    
T  901 tcttaggcctcctctcatcattcaatctctgctt 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 33337 - 33256
Alignment:
Q  218 ctcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    ||||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||| | |||||||||||||||||||    
T  33337 ctcttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattca 33256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 295
Target Start/End: Original strand, 41998 - 42151
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||| |   |||| ||||||||||||||| |||| |||||||||    
T  41998 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacac 42097  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| | || |||||||||| |||||||||||||||| | |||||||| ||||||    
T  42098 ttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 42151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41857 - 41913
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacacctt 57  Q
    |||||||||||||||||||||||||  ||| |||||||||| |||||||||||||||    
T  41857 acctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctt 41913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 53605 - 53297
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||| |||||||||||  ||| |||||||||| ||| ||||| || || ||||| |||  | ||||||| ||||   |||| || || ||     
T  53605 acctctgataagttggtcctcattagtagtctgcgtaccagtcaatgcaaatactttcccaccggttctaaccttcttcggctatgtgcattgtgaactg 53506  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| | || ||||||| ||| |||||  | |  || |||| ||||||||||||| |||   |||||||||| || |||||||| || || ||||||||||    
T  53505 atatggccctcttcattacagttataacataccacgtcaccacgcttgcaatcaactaggatgtgtcctttttgaccacacctgaatcatttcttctcat 53406  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |      ||| ||||||||||||||| |||| || ||||||||| |||| || ||| ||  | |||||||||||||  | |||||||||||||||||||     
T  53405 ccttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatcccagcaagagcatctctcctattgggcctcctctcatcattcaa 53306  T
Q  301 tctctgctt 309  Q
    |||||||||    
T  53305 tctctgctt 53297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 145 - 309
Target Start/End: Original strand, 263492 - 263656
Alignment:
Q  145 cttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttg 244  Q
    ||||||||| |||||   ||| || ||||| |||||||| || ||||||||||||||   |  ||| ||||||||||||||| |||| || ||||||||     
T  263492 cttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacactta 263591  T
Q  245 aaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    ||||| || ||||||  |||||||||||||||    |||||||||||||||||||||||||||||    
T  263592 aaacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcattcagtctctgctt 263656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 145 - 309
Target Start/End: Original strand, 203647 - 203811
Alignment:
Q  145 cttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttg 244  Q
    ||||||||| |||||   ||| || ||||| |||||||| || ||||||||||||||   |  ||| ||||||||||||||| |||| || ||||||||     
T  203647 cttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacactta 203746  T
Q  245 aaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    ||||| || ||||||  |||||||||||||||    |||||||||||||||||||||||||||||    
T  203747 aaacaaactatctcaccaggagcatctctcctaacgggcctcctctcatcattcagtctctgctt 203811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 134 - 297
Target Start/End: Original strand, 15327 - 15490
Alignment:
Q  134 acatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtcttttt 233  Q
    ||||||| |||||||||||||||||  ||||||| |||||| |||||||| || ||||||||||| ||      ||| ||||||||||||||| |||| |    
T  15327 acatcaccacgcttgcaatcagctagagtgtgtcatttctgaccacacctgaagcacttcttctcgtccttagtacaaacattactcttgtggcctttct 15426  T
Q  234 caccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    | ||||||||  | |||| |||||||  |||||||||||||||  | |||||||||||||||||    
T  15427 cgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcctcctctcatcatt 15490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 2030 - 1729
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    |||||||||||| | ||||||| || |||| ||||||| || |||||||||||| || ||||| |||  |  |||||| ||||   ||||||| || ||     
T  2030 acctctgataagcctgtcctcaatagcagtctgcgtactagtcaaagcaaacactttcccaccggttctaatcttctttggctgagtgcactgggaactg 1931  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||  | || || ||||||||||||||  |||  |||||||  | |||||| | ||| ||||||||||||||||| |||||||| || |||||||||||||    
T  1930 atgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcat 1831  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |   |  ||| |||||||| |||||| |||| || ||||||||  | || |  || |||  || ||||||||||||| | ||||| ||||||||||||||    
T  1830 ctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaattatttcagcagtagcatctctcctcttgggccttctctcatcattcag 1731  T
Q  301 tc 302  Q
    ||    
T  1730 tc 1729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 142 - 295
Target Start/End: Original strand, 724 - 877
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| || ||||||||  |||| || ||||| || ||||| || |||||| |||||||     |||| ||||| ||||||||| ||||||||||||||    
T  724 acgcttacattcagctaaattgtgacccttctgaccgcacctgaagcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacac 823  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    ||| |||| |||||||||  |||||||||||||||| |||||||||| ||||||    
T  824 ttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatca 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 583 - 642
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgcc 60  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||| ||||||||||||||    
T  583 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttgcc 642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 54169 - 54478
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||| |||||| ||   |||||||||||||  ||||||||||| || ||||  ||   | |||| || || |   ||||| | |||||     
T  54169 acctctgataagtcgatcctcactagtggtttgcgtaccagtgaaagcaaacactttaccactggtcctaacctttttcggttgtgtgcaccgtgagctg 54268  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| |||||||  || |||||  |||  ||||||| ||||||||||| |||||  |||||||| ||||| |||||||| ||||||||||||||||    
T  54269 atatgaccctcttcattgcagttataacaaacaacatcaccacgcttgcaataagctagagtgtgtcccttctgaccacacctgaaacacttcttctcat 54368  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
    |      ||| ||||||||||||||| |||| || ||||||||| |||| || ||||||  | |||||| ||  ||  | |||||||||||||||||||     
T  54369 ctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaagagcatttcatctattgggcctcctctcatcattcaa 54468  T
Q  301 tctctgcttc 310  Q
     |||||||||    
T  54469 cctctgcttc 54478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 299
Target Start/End: Complemental strand, 514374 - 514237
Alignment:
Q  162 tgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaat 261  Q
    ||||||| ||||| |||||||| || |||||| |||| ||     |||| ||||| ||||||||| |||| |||||||||||| |||| |||||||||      
T  514374 tgtgtcccttctgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcaga 514275  T
Q  262 aggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  514274 aggagcatctctcctcttaggcctcctatcatcattca 514237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 514535 - 514476
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgcc 60  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||| ||||||||||||||    
T  514535 acctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttgcc 514476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 168210 - 168131
Alignment:
Q  74 ttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatc 153  Q
    |||||||||||| | |||||||| |||||| |||||||||| | ||| |||||| |||  |||||| |||| ||||||||    
T  168210 ttcttaggcttctttcactgcgaactaatatgaccttcttccttacagttatagcaaactacatcatgacgattgcaatc 168131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 1036 - 764
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||| ||| |||||| ||   |||||| |||||| |||||||||||| || ||||| |||  | ||||| | || | | | ||||| || ||     
T  1036 acctctgataattcgatcctcactagtggtttgcataccagtcaaagcaaacactttaccaccggttctaaccttcctcggttgcgtacactgtgaactg 937  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||| |||||||  || |||||  |||  | ||||| |||||||||||||||||  |||||||||||||| |||||||| || |||||||||||||    
T  936 atatgaccctcttcattgcagttataacaaacaatatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcat 837  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctct 273  Q
    |      ||| ||||||||||| ||| |||| |  ||||||||| |||| |||||||||  ||||||||||||    
T  836 ctttagtacaaacattactcttatggcctttcttgccacacttgtaacaaacaatctcagcaggagcatctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 309
Target Start/End: Complemental strand, 6270 - 6131
Alignment:
Q  170 ttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcat 269  Q
    ||||| |||||||| || ||||||||||||||   |  ||| || |||||||||||| |||| || |||||||| ||||| || ||||| | ||||||||    
T  6270 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcgacaggagcat 6171  T
Q  270 ctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||||||  | ||||||||||||||||||||||| |||||    
T  6170 ctctcctattcggcctcctctcatcattcagtctttgctt 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6439 - 6373
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgtt 67  Q
    |||||||||||| ||||||||||||  ||| || ||||||| ||||||||| ||||| ||||| |||    
T  6439 acctctgataagacggtcctcattagtagtctgtgtaccagtcaaagcaaatacctttccaccagtt 6373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 134 - 309
Target Start/End: Complemental strand, 9836 - 9661
Alignment:
Q  134 acatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtcttttt 233  Q
    ||||||| |||||||||||| |||||   ||| || ||||  |||||||| || ||||||||||||||   |  ||| ||||||||||||||| |||| |    
T  9836 acatcaccacgcttgcaatccgctaaaaggtgacccttctaaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttct 9737  T
Q  234 caccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    | |||||||| ||||| || ||||||  |||||||||||||||    ||||||||||||||||| |||||| ||||    
T  9736 cgccacacttaaaacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcattaagtctcagctt 9661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 152 - 299
Target Start/End: Complemental strand, 30357 - 30210
Alignment:
Q  152 tcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacaga 251  Q
    ||||||| | ||||||||||||  |||||||||||||| ||| ||| ||| |   ||||  |||| ||||||||| ||||||||||||||||  |||| |    
T  30357 tcagctagtttgtgtcctttcttaccacacctaaaacatttcctcttatctctaccacaagcattgctcttgtggcctttttcaccacacttataacaaa 30258  T
Q  252 caatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    ||||||||  |||||||||| ||||| | |||||||| ||||||||||    
T  30257 caatctcagcaggagcatctttcctcttgggcctcctgtcatcattca 30210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 299
Target Start/End: Complemental strand, 844 - 687
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| || ||||||||  ||||||| || || |||||||| || |||||| |||| ||     |||| ||||| ||||||||| |||| |||||| ||    
T  844 acgcttacattcagctaaactgtgtcccttttgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccaaac 745  T
Q  242 ttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    ||| |||| |||||||||  |||||||||||||||| |||||||||| ||||||||||    
T  744 ttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 1173 - 1079
Alignment:
Q  33 gcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatag 127  Q
    ||||||||| ||||||||| ||||| ||||| ||| | ||||||||||||||| |||||||||| |||||| |||||||||| | ||| ||||||    
T  1173 gcgtaccagtcaaagcaaaaaccttcccaccagtttgggccttcttaggcttcttgcactgcgaactaatatgaccttcttccttacagttatag 1079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 3222 - 3295
Alignment:
Q  236 ccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    ||||||||||| || | ||||||| ||||||||||||||||| | ||||||||||||||||||| |||||||||    
T  3222 ccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgctt 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 299
Target Start/End: Complemental strand, 1280 - 1188
Alignment:
Q  207 cacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||| ||||| ||||||||| |||| |||||||||||| |||| |||||||||  |||||||||||||||| | || ||||| ||||||||||    
T  1280 cacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggtctcctatcatcattca 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 5241 - 5325
Alignment:
Q  32 tgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcat 116  Q
    |||||||||| |||||||||||| || ||||  ||| ||||||||||||||||| |||||||||| | |||| ||||||||||||    
T  5241 tgcgtaccagtcaaagcaaacactttcccactagtttgagccttcttaggcttcttgcactgcgaaccaatatgaccttcttcat 5325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 5327 - 5018
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||||||||||||||||||   ||| |||||||||| ||| |||||||| || ||||| ||   ||||||||| ||||   | ||||  || ||     
T  5327 acctctgataagtcggtcctcatttgtagtctgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactatgaactg 5228  T
Q  101 ataagaccttcttcatcacaattatagaaaatgacatcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcat 200  Q
    ||| |||||||||| |  || || ||| | |  |  || | |||||| || |||||||  |||||||||||||| |||||||| ||||| ||| ||||||    
T  5227 atatgaccttcttcgttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcat 5128  T
Q  201 cacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcag 300  Q
      |   ||||  ||||  | |||||| |||||||| ||| |||  |||| ||||| |||  |||||||||||||||| | |||||||| ||||||||||     
T  5127 ttctaccacaagcattgtttttgtggcctttttcatcactcttttaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcat 5028  T
Q  301 tctctgcttc 310  Q
     |||||||||    
T  5027 cctctgcttc 5018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 309
Target Start/End: Complemental strand, 12453 - 12288
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| |||||| |||||||||||||||||||  |||||||||| ||||||||||||||      | | ||||||||||||||| |||| || ||||||    
T  12453 acgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacac 12354  T
Q  242 ttgaaacagacaatctcaa--taggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||||     ||||||| |  ||    ||||||||||| | ||||| |||||||||||||||||||||||    
T  12353 ttgaa----gcaatctctacttaccctcatctctcctcttgggcctactctcatcattcagtctctgctt 12288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 309
Target Start/End: Complemental strand, 20633 - 20468
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    |||||| |||||| |||||||||||||||||||  |||||||||| ||||||||||||||      | | ||||||||||||||| |||| || ||||||    
T  20633 acgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacac 20534  T
Q  242 ttgaaacagacaatctcaa--taggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||||     ||||||| |  ||    ||||||||||| | ||||| |||||||||||||||||||||||    
T  20533 ttgaa----gcaatctctacttaccctcatctctcctcttgggcctactctcatcattcagtctctgctt 20468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 299
Target Start/End: Complemental strand, 67129 - 66992
Alignment:
Q  162 tgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaat 261  Q
    ||||||| || || |||||||| ||||| ||| ||||||  |   |||| ||||| ||||||||| ||||||||||||||||  |||| ||||||||       
T  67129 tgtgtcccttttgaccacacctgaaacatttcctctcatgtctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaatctcgga 67030  T
Q  262 aggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||||||||||||||| | || ||||| ||||||||||    
T  67029 aggagcatctctcctcttgggtctcctatcatcattca 66992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16791 - 16676
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagcta 100  Q
    ||||||||| |  ||||||||||| || ||||||||||||| |||||||||||| || ||||  |   ||| ||||||||||||| |||||||||| | |    
T  16791 acctctgatcaaccggtcctcattcactgtttgcgtaccagtcaaagcaaacactttcccactggcctgagtcttcttaggcttcttgcactgcgaacca 16692  T
Q  101 ataagaccttcttcat 116  Q
    ||  ||||||||||||    
T  16691 atgtgaccttcttcat 16676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 16579 - 16493
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattca 299  Q
    |||||||||||||| | || |||||||||||| | || |||| ||||  ||||| |||| || | ||||||||||||||||||||||    
T  16579 cattactcttgtggcccttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattca 16493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11931 - 11993
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    |||||||||||||||||||||||||  ||| || ||||||| ||||||||||||||| |||||    
T  11931 acctctgataagtcggtcctcattaggagtctgtgtaccagtcaaagcaaacacctttccacc 11993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 12060 - 12176
Alignment:
Q  142 acgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacac 241  Q
    ||||||||| ||||||||  |||| || ||||| |||||||| || |||||| | ||||| |   |||| ||||||||||||||| |||| |||||||||    
T  12060 acgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacac 12159  T
Q  242 ttgaaacagacaatctc 258  Q
    ||| | || ||||||||    
T  12160 ttgtagcaaacaatctc 12176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 302
Target Start/End: Original strand, 115819 - 115985
Alignment:
Q  136 atcacgacgcttgcaatcagctaatgtgtgtcctttctgtccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggtctttttca 235  Q
    ||||| ||||||||||||||||||   ||| || |||||||||||||| || ||||||||||||||   |  ||| |||||||| |||||| |||| ||     
T  115819 atcaccacgcttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcg 115918  T
Q  236 ccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtc 302  Q
    |||||||| || || || || |||  |||||  ||||| | | | ||||| ||||||||||||||||    
T  115919 ccacacttaaagcaaactatttcagcaggagtgtctcttcccttgggccttctctcatcattcagtc 115985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 94076 - 94026
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaa 51  Q
    ||||||||||||||| |||||||||  ||| |||||||||| |||||||||    
T  94076 acctctgataagtcgatcctcattagtagtctgcgtaccagtcaaagcaaa 94026  T

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Target: scaffold0270 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 7207 - 7303
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||||||||| ||| |||| ||||||||  |  | || |||||||||| |||||||||| || | |||||||||||||||||||||| ||| |||||    
T  7207 cattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgctt 7303  T

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Target: scaffold0270; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 14337 - 14433
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||||||||| ||| |||| ||||||||  |  | || |||||||||| |||||||||| || | |||||||||||||||||||||| ||| |||||    
T  14337 cattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgctt 14433  T

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Target: scaffold0161 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 36161 - 36245
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcat 296  Q
    ||||||||||||||| |||| ||||||||| || | || ||||||| | |||| |||||||| ||| |||| |||||||||||||    
T  36161 acattactcttgtggcctttctcaccacacctgtagcaaacaatcttagtaggggcatctcttctcttaggtctcctctcatcat 36245  T

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Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 299
Target Start/End: Complemental strand, 31008 - 30897
Alignment:
Q  188 cacttcttctcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcc 287  Q
    ||||||||||||||||  |  ||  |||||||||||||| | || |||||||||||| | || |||||||||  |||| ||||||| ||| |||  ||||    
T  31008 cacttcttctcatcaccattgcaagcattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctcttctcttagttctcc 30909  T
Q  288 tctcatcattca 299  Q
    ||||||||||||    
T  30908 tctcatcattca 30897  T

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Target: scaffold0550 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 10129 - 10071
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatc 270  Q
    ||||| ||||||||| |||| |||||||| |||||||||||||||||  ||||||||||    
T  10129 acattgctcttgtggcctttctcaccacaattgaaacagacaatctccgtaggagcatc 10071  T

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Target: scaffold0077 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 57546 - 57488
Alignment:
Q  251 acaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||||||||| |||||||||| || | |||||||||||||||||||||| ||| |||||    
T  57546 acaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgctt 57488  T

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Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 17493 - 17539
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctc 258  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||||    
T  17493 acattactcttgtggcctttctcaccacaattgaaacagacaatctc 17539  T

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Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 110877 - 110780
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgcttc 310  Q
    |||||||||||||| |||| ||||||||  |  | ||||||||||||| |||||||||| || | ||||| | ||||||||||  || ||||||||||    
T  110877 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctgcttc 110780  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 104561 - 104653
Alignment:
Q  214 attactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctg 306  Q
    ||||||||||||| |||| ||||||||  |  | || |||||||||| |||||||||| || | ||||||| |||||||||| ||| ||||||    
T  104561 attactcttgtggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggccgcctctcatcaatcattctctg 104653  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 25637 - 25720
Alignment:
Q  44 aaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttcatcacaattatag 127  Q
    |||||||| ||||| ||||| ||  | ||||||||||||||| |||||||||| |||||| |||||| ||| | ||| ||||||    
T  25637 aaagcaaaaaccttcccaccagtctgggccttcttaggcttcttgcactgcgaactaatatgacctttttccttacagttatag 25720  T

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Target: scaffold2059 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 294
Target Start/End: Complemental strand, 740 - 658
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatc 294  Q
    |||||||||||||||||||| |||||||| ||||||||   |||||||   |||||||| ||| || |||||| ||| |||||    
T  740 acattactcttgtggtctttctcaccacaattgaaacaagtaatctcagctggagcatccctcttcttaggccgcctatcatc 658  T

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Target: scaffold0848 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 5150 - 5068
Alignment:
Q  32 tgcgtaccagccaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaataagaccttcttc 114  Q
    |||||||||| ||||||||| ||||| ||||| ||  | ||||||||||||||| ||||||  || |||||| ||| ||||||    
T  5150 tgcgtaccagtcaaagcaaaaaccttcccaccagtctgggccttcttaggcttcttgcactttgaactaatatgactttcttc 5068  T

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Target: scaffold0447 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 1796 - 1750
Alignment:
Q  251 acaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    ||||||||| ||||||||||| || | ||||||||||||||||||||    
T  1796 acaatctcattaggagcatctttctttctaggcctcctctcatcatt 1750  T

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Target: scaffold0383 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 4660 - 4614
Alignment:
Q  251 acaatctcaataggagcatctctcctcctaggcctcctctcatcatt 297  Q
    ||||||||| ||||||||||| || | ||||||||||||||||||||    
T  4660 acaatctcattaggagcatctttctttctaggcctcctctcatcatt 4614  T

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Target: scaffold0289 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 121 - 167
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctc 258  Q
    ||||| ||||||||| |||| |||||||| |||||||||||||||||    
T  121 acattgctcttgtggcctttctcaccacaattgaaacagacaatctc 167  T

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Target: scaffold0207 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 4525 - 4443
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |||||||||||||| |||||||||||||  |  | ||||||||||| | |||||||||| || || |||||| ||| ||||||    
T  4525 cattactcttgtggcctttttcaccacaagtatagcagacaatctccacaggagcatctttcttcttaggccgcctatcatca 4443  T

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Target: scaffold0177 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 11327 - 11269
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatc 270  Q
    ||||| ||||||||| |||| |||||||| || ||||||||||||||  ||||||||||    
T  11327 acattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatc 11269  T

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Target: scaffold0177; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 15012 - 14954
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatc 270  Q
    ||||| ||||||||| |||| |||||||| || ||||||||||||||  ||||||||||    
T  15012 acattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatc 14954  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30056 - 30118
Alignment:
Q  1 acctctgataagtcggtcctcattaacagtttgcgtaccagccaaagcaaacaccttgccacc 63  Q
    ||||||||||||||||||||||||   ||| |||||||||  ||| ||||||||||| |||||    
T  30056 acctctgataagtcggtcctcattggtagtctgcgtaccaatcaatgcaaacacctttccacc 30118  T

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Target: scaffold0075 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 295
Target Start/End: Original strand, 48064 - 48146
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |||||||||||||| |||| ||||||||  |  | ||||||||||||| |||||||||| || | ||||| | ||||||||||    
T  48064 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatca 48146  T

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Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 55441 - 55359
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatca 295  Q
    |||||||||||||| |||| ||||||||  |  | ||||||||||||| |||||||||| || | ||||| | ||||||||||    
T  55441 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatca 55359  T

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Target: scaffold0819 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 447 - 504
Alignment:
Q  212 acattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcat 269  Q
    ||||| ||||||||| |||| |||||||| || |||||||||||||||  ||||||||    
T  447 acattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcat 504  T

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Target: scaffold0282 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 13444 - 13348
Alignment:
Q  213 cattactcttgtggtctttttcaccacacttgaaacagacaatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 309  Q
    |||||||||| ||| |||| ||||||||  || | || ||||||||| ||  | ||||| || | |||||||||||||||||||||| ||| |||||    
T  13444 cattactcttatggcctttctcaccacaagtgtagcaaacaatctcagtaacaacatctttctttctaggcctcctctcatcattcaatctttgctt 13348  T

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