View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12542_low_12 (Length: 331)

Name: NF12542_low_12
Description: NF12542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12542_low_12
NF12542_low_12
[»] chr2 (33 HSPs)
chr2 (1-313)||(38355867-38356182)
chr2 (247-315)||(44860333-44860401)
chr2 (247-292)||(37411245-37411290)
chr2 (247-292)||(5367205-5367250)
chr2 (249-309)||(18889575-18889635)
chr2 (252-292)||(20242728-20242768)
chr2 (247-290)||(23718039-23718082)
chr2 (247-290)||(24105711-24105754)
chr2 (247-293)||(18276534-18276580)
chr2 (247-285)||(21616775-21616813)
chr2 (255-313)||(28524447-28524505)
chr2 (247-292)||(34691806-34691851)
chr2 (247-292)||(34714218-34714263)
chr2 (250-291)||(39279691-39279732)
chr2 (252-292)||(34784983-34785023)
chr2 (249-309)||(35056883-35056943)
chr2 (247-286)||(35449526-35449565)
chr2 (247-309)||(17776600-17776662)
chr2 (247-289)||(30527599-30527641)
chr2 (247-292)||(2331807-2331850)
chr2 (248-309)||(11223847-11223908)
chr2 (247-292)||(12668424-12668469)
chr2 (247-292)||(28677922-28677966)
chr2 (248-289)||(30471052-30471093)
chr2 (254-291)||(31808097-31808134)
chr2 (247-292)||(42832277-42832322)
chr2 (248-284)||(15909641-15909677)
chr2 (247-291)||(18420436-18420480)
chr2 (252-292)||(20922929-20922969)
chr2 (247-279)||(21782832-21782864)
chr2 (247-302)||(36409620-36409673)
chr2 (247-295)||(42418882-42418930)
chr2 (247-291)||(44605141-44605185)
[»] scaffold0123 (1 HSPs)
scaffold0123 (247-313)||(44505-44571)
[»] chr7 (45 HSPs)
chr7 (245-292)||(22602711-22602758)
chr7 (247-313)||(6630892-6630958)
chr7 (247-309)||(32308133-32308195)
chr7 (248-293)||(5835261-5835306)
chr7 (247-292)||(9482947-9482992)
chr7 (247-292)||(20549804-20549849)
chr7 (247-302)||(3520333-3520388)
chr7 (247-302)||(19206063-19206118)
chr7 (255-293)||(640134-640172)
chr7 (247-292)||(3721106-3721151)
chr7 (247-292)||(5548689-5548734)
chr7 (247-292)||(7328692-7328737)
chr7 (247-292)||(16341509-16341554)
chr7 (247-292)||(17307906-17307951)
chr7 (247-292)||(19992014-19992059)
chr7 (247-292)||(49107834-49107878)
chr7 (247-291)||(15902835-15902879)
chr7 (247-291)||(17851444-17851488)
chr7 (252-292)||(18213034-18213074)
chr7 (250-286)||(22868058-22868094)
chr7 (247-307)||(38134392-38134452)
chr7 (252-292)||(39138462-39138502)
chr7 (247-309)||(24339655-24339717)
chr7 (247-289)||(27732243-27732285)
chr7 (247-308)||(29787356-29787415)
chr7 (250-292)||(32287464-32287506)
chr7 (247-292)||(1401038-1401083)
chr7 (247-292)||(1433467-1433512)
chr7 (247-288)||(21140987-21141028)
chr7 (247-292)||(21880165-21880210)
chr7 (247-292)||(24146829-24146874)
chr7 (247-288)||(26329387-26329428)
chr7 (247-292)||(26733317-26733362)
chr7 (247-292)||(27945054-27945099)
chr7 (247-292)||(35297673-35297718)
chr7 (247-279)||(2424627-2424659)
chr7 (247-291)||(5233642-5233686)
chr7 (247-287)||(12278848-12278888)
chr7 (247-287)||(18233604-18233644)
chr7 (254-302)||(21560523-21560571)
chr7 (247-291)||(23128663-23128707)
chr7 (247-291)||(23849460-23849504)
chr7 (247-291)||(27093415-27093459)
chr7 (247-291)||(27184842-27184886)
chr7 (247-302)||(30731050-30731103)
[»] chr1 (47 HSPs)
chr1 (247-309)||(44482243-44482305)
chr1 (249-302)||(34371728-34371781)
chr1 (247-291)||(1864882-1864926)
chr1 (247-315)||(25361899-25361967)
chr1 (247-306)||(27471553-27471612)
chr1 (247-292)||(7918212-7918257)
chr1 (247-292)||(36878474-36878519)
chr1 (247-292)||(40181884-40181929)
chr1 (252-292)||(30749858-30749898)
chr1 (252-292)||(30771309-30771349)
chr1 (249-291)||(10233268-10233310)
chr1 (245-291)||(13997894-13997940)
chr1 (250-292)||(20157351-20157393)
chr1 (247-293)||(23636049-23636095)
chr1 (247-285)||(25098563-25098601)
chr1 (247-292)||(1486710-1486755)
chr1 (245-294)||(6415000-6415049)
chr1 (247-292)||(6427363-6427408)
chr1 (247-292)||(9629901-9629946)
chr1 (247-292)||(9709833-9709878)
chr1 (247-292)||(9828057-9828102)
chr1 (247-292)||(14332643-14332688)
chr1 (247-284)||(19324575-19324612)
chr1 (247-292)||(25272495-25272540)
chr1 (247-292)||(38503333-38503378)
chr1 (247-291)||(10572591-10572635)
chr1 (254-293)||(5898266-5898305)
chr1 (247-314)||(17754324-17754391)
chr1 (247-293)||(2784569-2784615)
chr1 (247-293)||(2896121-2896167)
chr1 (254-292)||(5944303-5944341)
chr1 (247-313)||(16164295-16164361)
chr1 (253-287)||(17705592-17705626)
chr1 (247-293)||(19562621-19562667)
chr1 (247-293)||(40258933-40258979)
chr1 (247-293)||(43492494-43492540)
chr1 (254-292)||(52903269-52903307)
chr1 (247-284)||(12443469-12443506)
chr1 (255-292)||(13436479-13436516)
chr1 (247-292)||(18337342-18337387)
chr1 (247-292)||(24577187-24577232)
chr1 (247-288)||(31015056-31015097)
chr1 (247-280)||(34298449-34298482)
chr1 (247-292)||(34712384-34712429)
chr1 (247-292)||(38075971-38076016)
chr1 (247-292)||(39953147-39953192)
chr1 (247-287)||(17831537-17831577)
[»] chr6 (45 HSPs)
chr6 (247-292)||(7265594-7265639)
chr6 (247-292)||(9025495-9025540)
chr6 (247-294)||(19044477-19044524)
chr6 (247-293)||(13360372-13360418)
chr6 (247-292)||(7377992-7378037)
chr6 (247-292)||(9617447-9617492)
chr6 (247-292)||(9629396-9629441)
chr6 (247-292)||(19040365-19040410)
chr6 (247-292)||(20371111-20371156)
chr6 (247-292)||(26562702-26562747)
chr6 (247-291)||(7086808-7086852)
chr6 (247-287)||(11591876-11591916)
chr6 (254-292)||(7027262-7027300)
chr6 (247-313)||(16766710-16766776)
chr6 (247-292)||(5732511-5732556)
chr6 (250-315)||(7248374-7248439)
chr6 (247-292)||(7996379-7996424)
chr6 (247-292)||(8022377-8022422)
chr6 (247-292)||(9027191-9027236)
chr6 (247-292)||(9195755-9195800)
chr6 (247-292)||(14155240-14155285)
chr6 (247-292)||(21924936-21924981)
chr6 (247-288)||(30866149-30866190)
chr6 (247-292)||(34073348-34073393)
chr6 (247-291)||(9658892-9658936)
chr6 (247-315)||(10294120-10294188)
chr6 (247-295)||(11784214-11784262)
chr6 (247-291)||(13364707-13364751)
chr6 (247-285)||(10888982-10889020)
chr6 (247-292)||(31579228-31579271)
chr6 (247-292)||(7151425-7151470)
chr6 (247-292)||(8931603-8931648)
chr6 (247-312)||(9107351-9107416)
chr6 (247-292)||(10770675-10770720)
chr6 (247-292)||(13851749-13851794)
chr6 (252-309)||(16488574-16488631)
chr6 (247-292)||(32320670-32320715)
chr6 (247-292)||(32511667-32511712)
chr6 (247-292)||(33001290-33001335)
chr6 (247-292)||(34595147-34595192)
chr6 (247-286)||(10339132-10339172)
chr6 (248-292)||(17327656-17327700)
chr6 (252-292)||(18367854-18367894)
chr6 (247-291)||(26178683-26178727)
chr6 (247-291)||(32299288-32299332)
[»] chr5 (31 HSPs)
chr5 (247-315)||(3966516-3966584)
chr5 (247-292)||(6471890-6471935)
chr5 (247-292)||(28588675-28588720)
chr5 (247-292)||(30502389-30502434)
chr5 (247-292)||(30542732-30542777)
chr5 (247-292)||(41091258-41091303)
chr5 (247-294)||(14873530-14873577)
chr5 (245-302)||(12264820-12264877)
chr5 (247-292)||(16203796-16203841)
chr5 (247-288)||(18421846-18421887)
chr5 (247-284)||(24273039-24273076)
chr5 (247-284)||(24389138-24389175)
chr5 (247-292)||(36838556-36838601)
chr5 (252-289)||(39758290-39758327)
chr5 (247-287)||(23015995-23016035)
chr5 (254-292)||(2436942-2436980)
chr5 (247-292)||(6247635-6247680)
chr5 (247-292)||(11685952-11685997)
chr5 (247-292)||(17925173-17925218)
chr5 (247-292)||(21191057-21191102)
chr5 (252-309)||(21814279-21814336)
chr5 (247-292)||(22423813-22423858)
chr5 (247-292)||(26312782-26312827)
chr5 (247-292)||(34879363-34879408)
chr5 (247-287)||(5467984-5468024)
chr5 (252-292)||(6401516-6401556)
chr5 (247-291)||(23012410-23012454)
chr5 (247-291)||(23220996-23221040)
chr5 (252-292)||(32426870-32426910)
chr5 (247-315)||(39698554-39698622)
chr5 (252-292)||(42029770-42029810)
[»] chr4 (30 HSPs)
chr4 (247-315)||(903935-904003)
chr4 (247-294)||(5775357-5775404)
chr4 (248-288)||(40613464-40613504)
chr4 (238-293)||(9996844-9996899)
chr4 (247-290)||(16189722-16189765)
chr4 (247-294)||(18576036-18576083)
chr4 (252-315)||(44132622-44132685)
chr4 (247-285)||(36635337-36635375)
chr4 (250-292)||(46160912-46160954)
chr4 (247-292)||(8423719-8423764)
chr4 (247-284)||(22440609-22440646)
chr4 (247-292)||(30982879-30982924)
chr4 (248-309)||(38148709-38148770)
chr4 (247-292)||(54580024-54580069)
chr4 (248-292)||(40179637-40179681)
chr4 (249-292)||(10499271-10499314)
chr4 (245-292)||(13783292-13783339)
chr4 (247-293)||(7214522-7214568)
chr4 (254-292)||(22234891-22234929)
chr4 (247-293)||(30103357-30103402)
chr4 (247-293)||(33950149-33950195)
chr4 (248-293)||(8402742-8402787)
chr4 (247-292)||(13134463-13134508)
chr4 (247-292)||(15029778-15029823)
chr4 (247-292)||(15659761-15659806)
chr4 (247-291)||(7012079-7012123)
chr4 (247-287)||(24343520-24343560)
chr4 (247-291)||(29205457-29205501)
chr4 (245-273)||(30522935-30522963)
chr4 (247-302)||(35723375-35723431)
[»] scaffold0036 (1 HSPs)
scaffold0036 (247-302)||(9738-9793)
[»] chr8 (30 HSPs)
chr8 (247-302)||(11927077-11927132)
chr8 (247-293)||(14134712-14134758)
chr8 (247-292)||(4786339-4786384)
chr8 (247-292)||(13844597-13844642)
chr8 (252-309)||(26902159-26902216)
chr8 (247-292)||(34897098-34897143)
chr8 (247-306)||(11803272-11803331)
chr8 (247-290)||(31236580-31236623)
chr8 (247-293)||(12606829-12606875)
chr8 (247-309)||(15816113-15816175)
chr8 (247-293)||(20679395-20679441)
chr8 (247-292)||(3025564-3025609)
chr8 (255-292)||(8847277-8847314)
chr8 (247-292)||(11944678-11944723)
chr8 (247-292)||(33405385-33405430)
chr8 (247-291)||(7658476-7658520)
chr8 (247-315)||(29447088-29447156)
chr8 (247-291)||(40332204-40332248)
chr8 (247-290)||(4611547-4611590)
chr8 (252-291)||(18964195-18964234)
chr8 (247-286)||(24362209-24362248)
chr8 (247-302)||(25566854-25566909)
chr8 (255-294)||(28384993-28385032)
chr8 (247-294)||(33382018-33382065)
chr8 (247-290)||(39954282-39954325)
chr8 (247-285)||(14731725-14731763)
chr8 (247-292)||(4948665-4948710)
chr8 (247-292)||(12985405-12985450)
chr8 (247-288)||(27213560-27213601)
chr8 (257-293)||(8293848-8293884)
[»] scaffold0020 (1 HSPs)
scaffold0020 (247-292)||(135313-135358)
[»] chr3 (40 HSPs)
chr3 (247-292)||(7928463-7928508)
chr3 (247-292)||(8789551-8789596)
chr3 (247-292)||(25093515-25093560)
chr3 (247-287)||(11658828-11658868)
chr3 (247-293)||(20691332-20691378)
chr3 (254-292)||(40993336-40993374)
chr3 (247-292)||(8039836-8039881)
chr3 (247-292)||(8383270-8383315)
chr3 (247-292)||(49505155-49505200)
chr3 (252-292)||(35222956-35222996)
chr3 (250-289)||(10690266-10690305)
chr3 (247-293)||(11251991-11252035)
chr3 (247-286)||(32804547-32804586)
chr3 (245-291)||(3962795-3962841)
chr3 (247-285)||(11313808-11313846)
chr3 (247-309)||(11665957-11666019)
chr3 (247-293)||(13807182-13807228)
chr3 (247-285)||(16192758-16192796)
chr3 (254-292)||(38731238-38731276)
chr3 (247-292)||(6780420-6780465)
chr3 (247-292)||(7614416-7614461)
chr3 (247-292)||(15314877-15314922)
chr3 (247-292)||(25948888-25948933)
chr3 (247-292)||(28918014-28918059)
chr3 (247-308)||(34910330-34910391)
chr3 (247-292)||(45451566-45451611)
chr3 (248-293)||(48202269-48202314)
chr3 (247-283)||(1438817-1438853)
chr3 (252-292)||(2941576-2941616)
chr3 (250-282)||(11493372-11493404)
chr3 (253-289)||(11507479-11507515)
chr3 (247-283)||(12704020-12704056)
chr3 (252-292)||(13414487-13414527)
chr3 (252-292)||(13845526-13845566)
chr3 (252-292)||(14028025-14028065)
chr3 (247-291)||(17005621-17005665)
chr3 (245-281)||(29112292-29112328)
chr3 (247-287)||(29508457-29508497)
chr3 (247-287)||(34307786-34307826)
chr3 (247-303)||(39002045-39002101)
[»] scaffold0044 (1 HSPs)
scaffold0044 (247-290)||(53193-53236)
[»] scaffold1528 (1 HSPs)
scaffold1528 (247-313)||(1048-1114)
[»] scaffold0623 (1 HSPs)
scaffold0623 (252-302)||(5987-6037)
[»] scaffold0171 (1 HSPs)
scaffold0171 (254-292)||(23440-23478)
[»] scaffold0022 (1 HSPs)
scaffold0022 (247-293)||(90856-90902)
[»] scaffold0236 (1 HSPs)
scaffold0236 (251-292)||(25769-25810)
[»] scaffold0050 (1 HSPs)
scaffold0050 (247-292)||(70291-70336)
[»] scaffold0008 (1 HSPs)
scaffold0008 (247-292)||(263373-263418)
[»] scaffold0110 (1 HSPs)
scaffold0110 (247-291)||(28863-28907)
[»] scaffold0085 (1 HSPs)
scaffold0085 (247-287)||(26406-26446)


Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 313
Target Start/End: Complemental strand, 38356182 - 38355867
Alignment:
Q  1 agtctgcaactgcaacatacatccaagataaagatgggtctctcattacaggtaatttttagagctatcaaatgaactacgtaaatgagtaaaatcggct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38356182 agtctgcaactgcaacatacatccaagataaagatgggtctctcattacaggtaatttttagagctgtcaaatgaactacgtaaatgagtaaaatcggct 38356083  T
Q  101 cggcccatttgatattagtctacatattatttagccaagcccaactactgtgggccggataaaaaacccaagtcgttttaggcttgtgctg----taaag 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||    
T  38356082 cggcccatttgatattagtctacatattatttagccaagcccaactactgtgggccggataaaaaacccaagtcgttttaggcttgtgctgtaaataaag 38355983  T
Q  197 cacggatacgacagacacatacactagacatgaca--gacatgctgacagttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcat 294  Q
    ||||||||||   ||||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38355982 cacggatacg---gacacatacactagacacgacattgtcatgctgacagttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcat 38355886  T
Q  295 attggtgttggacacaaca 313  Q
    |||||||||||| ||||||    
T  38355885 attggtgttggatacaaca 38355867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 44860333 - 44860401
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaacatg 315  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| | |||||||||||||| |||||    
T  44860333 atttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatg 44860401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 37411290 - 37411245
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  37411290 atttgagaaaatcacataattcagtgtgattatatgtgtcgatgtc 37411245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 5367205 - 5367250
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  5367205 atttgaggaaatcacataattcagtgtaattatatgtgtcggtgtc 5367250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 309
Target Start/End: Complemental strand, 18889635 - 18889575
Alignment:
Q  249 ttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    ||||||||||||||||||||||||| || ||||||||||||||| | || |||| ||||||    
T  18889635 ttgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacac 18889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 20242768 - 20242728
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 20242728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 23718039 - 23718082
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtg 290  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  23718039 atttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 24105711 - 24105754
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtg 290  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  24105711 atttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 18276534 - 18276580
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  18276534 atttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtca 18276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 21616775 - 21616813
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgt 285  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  21616775 atttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 28524447 - 28524505
Alignment:
Q  255 aaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaaca 313  Q
    ||||||||||||||||||| ||||||||||||| |||  | ||||||| ||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaaca 28524505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 34691851 - 34691806
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||||    
T  34691851 atttgataaaatcatataattcagtgtaattatatgtgtcggtgtc 34691806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 34714263 - 34714218
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||||    
T  34714263 atttgataaaatcatataattcagtgtaattatatgtgtcggtgtc 34714218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 39279691 - 39279732
Alignment:
Q  250 tgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  39279691 tgagaaaatcaaataattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 34785023 - 34784983
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  34785023 agaaaatcacataatttagtgtaattatatgtgtcggtgtc 34784983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 35056883 - 35056943
Alignment:
Q  249 ttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    ||||||||| || |||||||||||| |||||||||||||||||| | | ||||| ||||||    
T  35056883 ttgagaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 35056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 286
Target Start/End: Original strand, 35449526 - 35449565
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtc 286  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  35449526 atttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 17776600 - 17776662
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    |||| |||||| ||||||| ||||||| |||||||||||| ||||||  | ||||||||||||    
T  17776600 atttaagaaaaccacataagtcagtgtaattatatgtgtcagtgtcaagtcggtgttggacac 17776662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 30527641 - 30527599
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggt 289  Q
    |||||||||||||| |||||| ||||| |||||||||||||||    
T  30527641 atttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 2331807 - 2331850
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  2331807 atttgagaaaatcacataattcagtgt-att-tatgtgtcggtgtc 2331850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 11223908 - 11223847
Alignment:
Q  248 tttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    ||||| ||||| |||||||||||||| |||| | ||||||||||||| | ||||| ||||||    
T  11223908 tttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacac 11223847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 12668469 - 12668424
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| ||||| |||||||||||||| |||||| |||||||||||    
T  12668469 atttgaaaaaatgacataattcagtgtaattataagtgtcggtgtc 12668424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 28677922 - 28677966
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||    
T  28677922 atttgaaaaaatcacataattcagtgtaattatatgt-tcggtgtc 28677966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 30471052 - 30471093
Alignment:
Q  248 tttgagaaaatcacataattcagtgtgattatatgtgtcggt 289  Q
    |||||||||||||||||||||  ||| |||||||||||||||    
T  30471052 tttgagaaaatcacataattcgatgtaattatatgtgtcggt 30471093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 291
Target Start/End: Original strand, 31808097 - 31808134
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  31808097 aaaatcacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 42832322 - 42832277
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| ||||| |||||||| |||||| |||||||||||    
T  42832322 atttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 15909677 - 15909641
Alignment:
Q  248 tttgagaaaatcacataattcagtgtgattatatgtg 284  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  15909677 tttgagaaaattacataattcagtgtaattatatgtg 15909641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 18420480 - 18420436
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    ||||||||||||||||||||||| ||  |||||| ||||||||||    
T  18420480 atttgagaaaatcacataattcaatgcaattataagtgtcggtgt 18420436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 20922969 - 20922929
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  20922969 agaaaatcacataatttagtgtaattatatgtgtctgtgtc 20922929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 21782864 - 21782832
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattat 279  Q
    ||||||||||||||||||||||||||| |||||    
T  21782864 atttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 36409673 - 36409620
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    |||||| |||||||||||||| ||||| ||  |||||||||||||||| |||||||    
T  36409673 atttgaaaaaatcacataatttagtgtaat--tatgtgtcggtgtcatgttggtgt 36409620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 42418882 - 42418930
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcata 295  Q
    |||||| ||||| |||||||||||| |||||| || |||||||||||||    
T  42418882 atttgaaaaaatgacataattcagtatgattacatctgtcggtgtcata 42418930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 44605185 - 44605141
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||||||||| |||||||||| ||| |||| ||||||||||||    
T  44605185 atttgagaaaataacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 44571 - 44505
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaaca 313  Q
    ||||||||||||||||||||||||||| ||||||||||||||| || | | ||||||||||||||||    
T  44571 atttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaaca 44505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 22602758 - 22602711
Alignment:
Q  245 ttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22602758 ttatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 22602711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 6630958 - 6630892
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaaca 313  Q
    |||||||||| |||| ||||||||||| ||||||||||||| |||| | ||||||| ||||||||||    
T  6630958 atttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaaca 6630892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 32308133 - 32308195
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||| | | ||||||||||||    
T  32308133 atttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacac 32308195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 5835261 - 5835306
Alignment:
Q  248 tttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||    
T  5835261 tttgagaaaataacataattcagtgtaattatatgtgtcggtgtca 5835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 9482947 - 9482992
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||    
T  9482947 atttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 9482992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 20549804 - 20549849
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  20549804 atttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtc 20549849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 3520388 - 3520333
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    |||||||||||||| |||||||| ||| |||||||||||||||| ||| |||||||    
T  3520388 atttgagaaaatcatataattcaatgtaattatatgtgtcggtgacatgttggtgt 3520333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 19206063 - 19206118
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    ||||||||||||||||||||||| | | |||||||||||||||||| | |||||||    
T  19206063 atttgagaaaatcacataattcattataattatatgtgtcggtgtcttgttggtgt 19206118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 640134 - 640172
Alignment:
Q  255 aaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggtgtca 640172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 3721106 - 3721151
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||    
T  3721106 atttgagaaaatcacataatttagtataattatatgtgtcggtgtc 3721151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 5548689 - 5548734
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||    
T  5548689 atttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtc 5548734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 7328737 - 7328692
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||    
T  7328737 atttgagaaaataacataatttagtgtaattatatgtgtcggtgtc 7328692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 16341509 - 16341554
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||    
T  16341509 atttgagaaaatcacataattaagtgtaattatatgtgccggtgtc 16341554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 17307906 - 17307951
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||    
T  17307906 atttgagaaaataacataattcagtgtaattatatgtgttggtgtc 17307951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 19992014 - 19992059
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||    
T  19992014 atttgagaaaatcacatatttcagtgtaattataagtgtcggtgtc 19992059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 49107834 - 49107878
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  49107834 atttgagaaaa-cacataattgagtgtgattatatgtgtcggtgtc 49107878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 15902835 - 15902879
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||    
T  15902835 atttgataaaatcacataatttagtgtaattatatgtgtcggtgt 15902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 17851444 - 17851488
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||| |||||||||||||||||||||| |||||||||||| ||||    
T  17851444 attttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 18213074 - 18213034
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggtgtc 18213034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 22868058 - 22868094
Alignment:
Q  250 tgagaaaatcacataattcagtgtgattatatgtgtc 286  Q
    |||||||||||||||||||||||| ||||||||||||    
T  22868058 tgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 38134452 - 38134392
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggac 307  Q
    |||||||||||| |||||||||| ||| || |||||||||||| |||| | ||||||||||    
T  38134452 atttgagaaaatgacataattcaatgtaatcatatgtgtcggtctcatgtgggtgttggac 38134392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 39138462 - 39138502
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggtgtc 39138502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 24339655 - 24339717
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    |||||| |||||||||||||||||||| |||| | ||||||||||| | | ||||| ||||||    
T  24339655 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 24339717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 27732285 - 27732243
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggt 289  Q
    |||| ||||||| |||||||||||||| |||||||||||||||    
T  27732285 atttaagaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 29787415 - 29787356
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggaca 308  Q
    ||||||||||||||||||||||||||| ||  ||||||| ||||| || | |||||||||||    
T  29787415 atttgagaaaatcacataattcagtgtaat--tatgtgttggtgtaatgtcggtgttggaca 29787356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 32287506 - 32287464
Alignment:
Q  250 tgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||||||  | ||||||||||||||||    
T  32287506 tgagaaaatcacataattcagtgcaagtatatgtgtcggtgtc 32287464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 1401038 - 1401083
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||| |||||||||||||||| |||||| || ||||||||    
T  1401038 atttgagaaactcacataattcagtgtaattataagtatcggtgtc 1401083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 1433467 - 1433512
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||| |||  |||| ||||||||||||||||||    
T  1433467 atttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtc 1433512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 21141028 - 21140987
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcgg 288  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  21141028 atttaagaaaatcatataattcagtgtgattataggtgtcgg 21140987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 21880165 - 21880210
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| |||||||||||||| |||| | |||||||||||    
T  21880165 atttgagaaaattacataattcagtgtaattacaagtgtcggtgtc 21880210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 24146829 - 24146874
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||| |||||||||||||||||| | | ||||||||||||||||||    
T  24146829 attttagaaaatcacataattcaatataattatatgtgtcggtgtc 24146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 26329428 - 26329387
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcgg 288  Q
    ||||||||||| |||| |||||||||| ||||||||||||||    
T  26329428 atttgagaaaaacacacaattcagtgtaattatatgtgtcgg 26329387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 26733317 - 26733362
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||| | |||| |||||||||||||    
T  26733317 atttgacaaaatcacataattcagtctaattaaatgtgtcggtgtc 26733362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 27945054 - 27945099
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| |||||||||||||| |||| | |||||||||||    
T  27945054 atttgagaaaattacataattcagtgtaattacaagtgtcggtgtc 27945099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 35297718 - 35297673
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||| | | ||||||||||| ||||||    
T  35297718 atttgagaaaatcacataattcattataattatatgtgttggtgtc 35297673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 279
Target Start/End: Original strand, 2424627 - 2424659
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattat 279  Q
    ||||||||||||||||||||||||||| |||||    
T  2424627 atttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 5233642 - 5233686
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    ||||||||||||||||||||  ||||| ||||||||||| |||||    
T  5233642 atttgagaaaatcacataatctagtgtaattatatgtgttggtgt 5233686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 12278848 - 12278888
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    |||| ||||||| |||||||||||||| |||||||||||||    
T  12278848 atttaagaaaatgacataattcagtgtaattatatgtgtcg 12278888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 18233644 - 18233604
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    |||||||||||| |||||||||||||| |||||| ||||||    
T  18233644 atttgagaaaatgacataattcagtgtaattataggtgtcg 18233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 21560523 - 21560571
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    |||||||||||||||||||| |||| | ||||||||||| ||| |||||    
T  21560523 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgt 21560571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 23128707 - 23128663
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    ||||||||||| || |||||||||||| || ||||||||||||||    
T  23128707 atttgagaaaaccatataattcagtgtaatcatatgtgtcggtgt 23128663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 23849504 - 23849460
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||| |||||| ||||||||||||| | |||||||||||||||||    
T  23849504 atttaagaaaaacacataattcagtataattatatgtgtcggtgt 23849460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 27093459 - 27093415
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||| |||||||||||||||| ||||| |||||||| ||||||||    
T  27093459 atttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 27184842 - 27184886
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||| |||||||||||||||| ||||| |||||||| ||||||||    
T  27184842 atttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 30731050 - 30731103
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    ||||||||||||||||||||||||||| ||  | |||||||||||| | |||||||    
T  30731050 atttgagaaaatcacataattcagtgtaat--tgtgtgtcggtgtcgtgttggtgt 30731103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 44482243 - 44482305
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| | | ||||| ||||||    
T  44482243 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 44482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 34371728 - 34371781
Alignment:
Q  249 ttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgt 34371781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 1864926 - 1864882
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  1864926 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 25361899 - 25361967
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaacatg 315  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| | | ||||| |||||| |||||    
T  25361899 atttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgacatg 25361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 27471612 - 27471553
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttgga 306  Q
    ||||||||||| ||||||||||||||| |||| |||||| |||||||||| |||||||||    
T  27471612 atttgagaaaagcacataattcagtgtaattacatgtgttggtgtcatatcggtgttgga 27471553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 7918257 - 7918212
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  7918257 atttgagaaaatcacataattcagtgtaattatatgtgtcagtgtc 7918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 36878474 - 36878519
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  36878474 atttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 40181884 - 40181929
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  40181884 atttgagaaaatcacataattcagtgtaattatatgtatcggtgtc 40181929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 30749858 - 30749898
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 30749898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 30771309 - 30771349
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 30771349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 10233268 - 10233310
Alignment:
Q  249 ttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    ||||||||||||||||||||||||| |||||||||||| ||||    
T  10233268 ttgagaaaatcacataattcagtgtaattatatgtgtctgtgt 10233310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 13997894 - 13997940
Alignment:
Q  245 ttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||| | |||||||||||||||||||| |||||||||||||||||    
T  13997894 ttatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 20157393 - 20157351
Alignment:
Q  250 tgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  20157393 tgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc 20157351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 23636095 - 23636049
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||    
T  23636095 atttgagaaaattacataattcagtgtaattgtatgtgtcggtgtca 23636049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 25098601 - 25098563
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgt 285  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  25098601 atttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 1486755 - 1486710
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||||| |||||||||||    
T  1486755 atttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc 1486710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 6415049 - 6415000
Alignment:
Q  245 ttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcat 294  Q
    |||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  6415049 ttatttgagaaaatcacataatacagtttaattagatgtgtcggtgtcat 6415000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 6427363 - 6427408
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  6427363 atttgagaaaatcacataattcaatgtaattatatgtgttggtgtc 6427408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 9629946 - 9629901
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||    
T  9629946 atttgataaaatcatataattcagtgtgattataagtgtcggtgtc 9629901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 9709833 - 9709878
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||    
T  9709833 atttgagaaaatcacataattcgttgtaattatatgtgtcggtgtc 9709878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 9828057 - 9828102
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||    
T  9828057 atttgataaaatcacataattcagtgtaattttatgtgtcggtgtc 9828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 14332688 - 14332643
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  14332688 atttgagaaaatcacataatttagtgtaattatatgtctcggtgtc 14332643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 19324575 - 19324612
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtg 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  19324575 atttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 25272495 - 25272540
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||    
T  25272495 atttgagaaaatcacataatttagtgtaattataagtgtcggtgtc 25272540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 38503333 - 38503378
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||| ||| |||||||| ||||||||||||||||||    
T  38503333 atttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 10572635 - 10572591
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||    
T  10572635 atttgagaaaatcacataattcggtgtaattaaatgtgtcggtgt 10572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 293
Target Start/End: Complemental strand, 5898305 - 5898266
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  5898305 aaaatcacataattcagtgtaattatatgcgtcggtgtca 5898266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 314
Target Start/End: Original strand, 17754324 - 17754391
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaacat 314  Q
    |||||| ||||| |||||||||||||| | |||||||||| ||||  | | |||||||||||||||||    
T  17754324 atttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaacat 17754391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 2784569 - 2784615
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||| |||||||||||||||| ||| | |||||||||||||||||||    
T  2784569 atttaagaaaatcacataattgagtataattatatgtgtcggtgtca 2784615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 2896167 - 2896121
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||||||||||||||||||||||||||   ||||| |||||||||||    
T  2896167 atttgagaaaatcacataattcagtgtagctatatatgtcggtgtca 2896121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 5944303 - 5944341
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  5944303 aaaatcacataattcagtgtaattataagtgtcggtgtc 5944341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 16164361 - 16164295
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaaca 313  Q
    |||||| |||||||||||||| | ||| ||||||||||||  |||| | |||||||||||| |||||    
T  16164361 atttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaaca 16164295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 287
Target Start/End: Complemental strand, 17705626 - 17705592
Alignment:
Q  253 gaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    ||||||||||||||||||||| |||||||||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtgtcg 17705592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 19562667 - 19562621
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||| |||| |||||||| ||||||||||| |||||||    
T  19562667 atttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtca 19562621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 40258979 - 40258933
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||||| |||||||||||||||||||| |||| | ||||||||||||    
T  40258979 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtca 40258933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 43492540 - 43492494
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||||| |||||| |||| ||||| |||||||||||||    
T  43492540 atttgagaaaatcacgtaattcggtgtaattatgtgtgtcggtgtca 43492494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 52903269 - 52903307
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  52903269 aaaatcatataattcagtgtaattatatgtgtcggtgtc 52903307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 12443506 - 12443469
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtg 284  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  12443506 atttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 13436479 - 13436516
Alignment:
Q  255 aaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  13436479 aaatcacataattcagtgtaattatatgtgttggtgtc 13436516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 18337342 - 18337387
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||| | |||||||||||    
T  18337342 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 18337387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 24577232 - 24577187
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||| | |||||||||||    
T  24577232 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24577187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 31015056 - 31015097
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcgg 288  Q
    ||||||||||||||||||||||||||| |||| | |||||||    
T  31015056 atttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 34298449 - 34298482
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattata 280  Q
    ||||||||||||||||||||||||||| ||||||    
T  34298449 atttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 34712429 - 34712384
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| |||||||| ||||| |||||||||||| |||||    
T  34712429 atttgagaaaataacataatttagtgtaattatatgtgtcagtgtc 34712384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 38076016 - 38075971
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||| ||||||||||| ||||||| || |||||||||||||||    
T  38076016 atttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgtc 38075971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 39953192 - 39953147
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||| |||||||||||||||| ||||| ||| ||||||||||||||    
T  39953192 attttagaaaatcacataatttagtgtaattgtatgtgtcggtgtc 39953147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 17831577 - 17831537
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    ||||||||||||||||| ||||||||| || ||||||||||    
T  17831577 atttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 7265639 - 7265594
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  7265639 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 7265594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 9025540 - 9025495
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  9025540 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 19044477 - 19044524
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcat 294  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  19044477 atttgagaatatcacataattcagtgttattatatgtgtcggtgtcat 19044524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 13360418 - 13360372
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  13360418 atttgagaaaatcacataattcagtgtaattatatgtttcggtgtca 13360372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 7377992 - 7378037
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  7377992 atttgagaaaatcacataattcaatgtaattatatgtgtcggtgtc 7378037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 9617447 - 9617492
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  9617447 atttgagaaaatcacataattcaatgtaattatatgtgtcggtgtc 9617492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 9629396 - 9629441
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  9629396 atttgagaaaatcacataattcaatgtaattatatgtgtcggtgtc 9629441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 19040365 - 19040410
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  19040365 atttgagaaaatcacataattcagtgtaattatatgtgtctgtgtc 19040410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 20371156 - 20371111
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  20371156 atttgagaaaatcacataactcaatgtgattatatgtgtcggtgtc 20371111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 26562702 - 26562747
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  26562702 atttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 26562747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 7086808 - 7086852
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||    
T  7086808 atttgagaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 11591916 - 11591876
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  11591916 atttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 7027262 - 7027300
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggtgtc 7027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 16766710 - 16766776
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaaca 313  Q
    |||||| |||||||||||||||||||| |||| | ||||||||||| | | ||||| ||||||||||    
T  16766710 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaaca 16766776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 5732556 - 5732511
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||    
T  5732556 atttgagaaaatcacatattttagtgtaattatatgtgtcggtgtc 5732511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 7248374 - 7248439
Alignment:
Q  250 tgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaacatg 315  Q
    |||| |||||||||||||||| || ||||||||||| || ||| | | ||||||||||||||||||    
T  7248374 tgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatg 7248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 7996424 - 7996379
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||    
T  7996424 atttgagaaaatcatataattcagtgtaattatatgcgtcggtgtc 7996379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 8022377 - 8022422
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||    
T  8022377 atttgagaaaatcatataattcagtgtaattatatgcgtcggtgtc 8022422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 9027191 - 9027236
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||    
T  9027191 atttgagataatcacataattccgtgtaattatatgtgtcggtgtc 9027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 9195800 - 9195755
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||    
T  9195800 atttgagaaaatgacataatttagtgtaattatatgtgtcggtgtc 9195755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 14155285 - 14155240
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||    
T  14155285 atttgagaaaatcacataatacagtgtgattacatgtgttggtgtc 14155240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 21924981 - 21924936
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||    
T  21924981 atttgagaatatcaaataattcagtgtaattatatgtgtcggtgtc 21924936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 30866190 - 30866149
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcgg 288  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  30866190 atttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 34073393 - 34073348
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||| ||||||||||||| |||||||| |||||||||    
T  34073393 atttgagaaaatctcataattcagtgtaattatatgggtcggtgtc 34073348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 9658892 - 9658936
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||| |||||||||||||||||||||| ||||||| |||||||||    
T  9658892 atttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 10294120 - 10294188
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaacatg 315  Q
    |||||||| |||| |||| |||| ||| |||||||||||||||||| | ||||||| |||||| |||||    
T  10294120 atttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatg 10294188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 11784262 - 11784214
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcata 295  Q
    ||||||||||||||||| | ||||||| ||||||| |||||||||||||    
T  11784262 atttgagaaaatcacatgaatcagtgtaattatatatgtcggtgtcata 11784214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 13364751 - 13364707
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||||||||||| |||||||||||| || ||||||||||||||    
T  13364751 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 13364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 10889020 - 10888982
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgt 285  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  10889020 atttgataaaatcacataatttagtgtgattatatgtgt 10888982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 31579271 - 31579228
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||    
T  31579271 atttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtc 31579228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 7151425 - 7151470
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  7151425 atttgaaaaaatcacataattaagtgtaattatatgtgttggtgtc 7151470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 8931648 - 8931603
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| |||||||||||| | ||||||||||||| ||||    
T  8931648 atttgagaaaataacataattcagtataattatatgtgtcgatgtc 8931603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 9107416 - 9107351
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaac 312  Q
    |||||| ||||||||| |||||||||| |||| | ||||||||||| | | ||||| |||||||||    
T  9107416 atttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaac 9107351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 10770720 - 10770675
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||| | |||||||||||    
T  10770720 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 10770675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 13851749 - 13851794
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| || ||||||||||| ||||||||||||| ||||    
T  13851749 atttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 13851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 16488631 - 16488574
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    ||||||||||| ||| |||||| |||||||||||||||||| | | ||||| ||||||    
T  16488631 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 16488574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 32320715 - 32320670
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||| ||| ||||||||| ||||||||    
T  32320715 atttgataaaatcacataattcaatgtcattatatgtatcggtgtc 32320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 32511712 - 32511667
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||| |||||||||||||||||||||| |||||| |||| ||||||    
T  32511712 atttaagaaaatcacataattcagtgtaattataagtgttggtgtc 32511667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 33001335 - 33001290
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||| | ||| ||||||||||||||||||    
T  33001335 atttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtc 33001290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 34595147 - 34595192
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||| | |||||||||||    
T  34595147 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 34595192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 286
Target Start/End: Complemental strand, 10339172 - 10339132
Alignment:
Q  247 atttgagaaaatcacataattcagtg-tgattatatgtgtc 286  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  10339172 atttgagaaaatcacataattcagtgttaattatatgtgtc 10339132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 17327700 - 17327656
Alignment:
Q  248 tttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||| ||||| | |||||||||| |||||    
T  17327700 tttgagaaaatcacataatttagtgtaactatatgtgtcagtgtc 17327656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 18367854 - 18367894
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  18367854 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 18367894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 26178727 - 26178683
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||| |||||||||||||| ||||| || ||||||||||||||    
T  26178727 atttgataaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 32299288 - 32299332
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    ||||||||||||||||||||||| |||  ||||| ||||||||||    
T  32299288 atttgagaaaatcacataattcaatgtagttatacgtgtcggtgt 32299332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 3966516 - 3966584
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaacatg 315  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| | |  |||| ||||||||||||    
T  3966516 atttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatg 3966584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 6471935 - 6471890
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||    
T  6471935 atttgagaaaatcacataattcagtgtaattatatgtgtgggtgtc 6471890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 28588720 - 28588675
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  28588720 atttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 28588675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 30502434 - 30502389
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  30502434 atttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtc 30502389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 30542777 - 30542732
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  30542777 atttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtc 30542732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 41091303 - 41091258
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  41091303 atttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 41091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 14873530 - 14873577
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcat 294  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  14873530 atttgagaaaagcacataatttagtgtaattatatgtgtcggtgtcat 14873577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 12264877 - 12264820
Alignment:
Q  245 ttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    |||||||||||||| |||| ||||||||| ||||||||||||  |||||||| |||||    
T  12264877 ttatttgagaaaattacatgattcagtgtaattatatgtgtcaatgtcatatcggtgt 12264820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 16203841 - 16203796
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  16203841 atttgagaaaatctcataatttagtgtaattatatgtgtcggtgtc 16203796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 18421887 - 18421846
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcgg 288  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  18421887 atttgagaaaatcacataatccagtgtaattatatgtgtcgg 18421846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 24273076 - 24273039
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtg 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  24273076 atttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 24389138 - 24389175
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtg 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  24389138 atttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 36838556 - 36838601
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||    
T  36838556 atttgagaaaattacataatttagtgtaattatatgtgtcggtgtc 36838601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 39758290 - 39758327
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggt 289  Q
    |||||||||||||||||||||| |||||||||||||||    
T  39758290 agaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 23016035 - 23015995
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  23016035 atttgagaaaatcacataattcagtgtaattataggtgtcg 23015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 2436942 - 2436980
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  2436942 aaaatcacataattcgttgtgattatatgtgtcggtgtc 2436980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 6247635 - 6247680
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||| | |||||||||||    
T  6247635 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 6247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 11685952 - 11685997
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||| || ||||||| ||||| ||||||||||||||||||    
T  11685952 atttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtc 11685997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 17925218 - 17925173
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||| |||||||||||||||||| ||| || |||||||||||||||    
T  17925218 atttaagaaaatcacataattcaatgtaataatatgtgtcggtgtc 17925173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 21191102 - 21191057
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||| | |||||||||||    
T  21191102 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 21191057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 21814279 - 21814336
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    ||||||||||| ||| |||||| |||||||||||||||||| | | ||||| ||||||    
T  21814279 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 21814336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 22423858 - 22423813
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||| | | ||||||| ||||||||||    
T  22423858 atttgagaaaatcacataattcaatataattatatatgtcggtgtc 22423813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 26312782 - 26312827
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  26312782 atttgagaaaatcaattaattcagtgtaattatatgtatcggtgtc 26312827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 34879363 - 34879408
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||| |||||||||||| || |||||||||| ||||    
T  34879363 atttgagaaaatcatataattcagtgtaataatatgtgtcgatgtc 34879408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 5468024 - 5467984
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    |||||| |||||||||||||||||||| |||||| ||||||    
T  5468024 atttgataaaatcacataattcagtgtaattataggtgtcg 5467984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 6401516 - 6401556
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  6401516 agaaaatcacaaaatacagtgtaattatatgtgtcggtgtc 6401556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 23012454 - 23012410
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||||||||||| |||||| | ||| |||||||||||||||||    
T  23012454 atttgagaaaatcatataatttaatgtaattatatgtgtcggtgt 23012410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 23220996 - 23221040
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||| |||||||||||||| ||||| || ||||||||||||||    
T  23220996 atttgataaaatcacataatttagtgttatcatatgtgtcggtgt 23221040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 32426910 - 32426870
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||| ||| ||||| ||||||||||||    
T  32426910 agaaaatcacataattcattgtaattatttgtgtcggtgtc 32426870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 39698554 - 39698622
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaacatg 315  Q
    |||||| |||||||||||||||||||| |||| | ||||| ||||| | | ||||| |||||| |||||    
T  39698554 atttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatg 39698622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 42029770 - 42029810
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||| ||| ||||||||| ||||||||    
T  42029770 agaaaatcacataattcaatgtaattatatgtatcggtgtc 42029810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 903935 - 904003
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaacatg 315  Q
    ||||||||||||||||||||||||||| ||||||||| || || || ||| |||||||||||| |||||    
T  903935 atttgagaaaatcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgacatg 904003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 5775404 - 5775357
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcat 294  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  5775404 atttgagaaaatcacataattaagtgtaattatatgtgtcggtgtcat 5775357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 40613464 - 40613504
Alignment:
Q  248 tttgagaaaatcacataattcagtgtgattatatgtgtcgg 288  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  40613464 tttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 9996844 - 9996899
Alignment:
Q  238 ctgacagttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||||| | ||||||||||||||||||||||||| | ||||||||| |||||||||    
T  9996844 ctgacaataatttgagaaaatcacataattcagtataattatatgtctcggtgtca 9996899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 16189722 - 16189765
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtg 290  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||    
T  16189722 atttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 18576083 - 18576036
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcat 294  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  18576083 atttgagaaaatcacataattcggtgtaattatatgtgttggtgtcat 18576036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 44132685 - 44132622
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaacatg 315  Q
    |||||||||| ||||||||| | |||||||||||||||||| | ||||||| | ||||||||||    
T  44132685 agaaaatcacgtaattcagtataattatatgtgtcggtgtcgtgttggtgtcgaacacaacatg 44132622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 36635337 - 36635375
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgt 285  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  36635337 atttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 46160912 - 46160954
Alignment:
Q  250 tgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  46160912 tgagaaaataacataattcagtgttattatatgtgtcggtgtc 46160954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 8423764 - 8423719
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||    
T  8423764 atttgagaaaatcacataattcagtgtaattataaatgtcggtgtc 8423719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 22440646 - 22440609
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtg 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  22440646 atttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 30982924 - 30982879
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||    
T  30982924 atttgagaaaatcacatatttcagtgtaattataagtgtcggtgtc 30982879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 38148770 - 38148709
Alignment:
Q  248 tttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    |||||||||||||||||||||||||| ||| ||  ||||| |||| | ||||||||||||||    
T  38148770 tttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacac 38148709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 54580069 - 54580024
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||||| |||||||||||    
T  54580069 atttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc 54580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 40179681 - 40179637
Alignment:
Q  248 tttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||| |||||||||||||||||||| |||||||| |||||||||    
T  40179681 tttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtc 40179637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 10499314 - 10499271
Alignment:
Q  249 ttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||    
T  10499314 ttgagaaaatcacataatttagtgtaattatatgtgtcagtgtc 10499271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 13783292 - 13783339
Alignment:
Q  245 ttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||| |||||| |||||||||| |||||||||| |||||||    
T  13783292 ttatttgagaagatcacaaaattcagtgtaattatatgtgccggtgtc 13783339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 7214568 - 7214522
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||||||||||| | ||| |||||||| ||||||||||    
T  7214568 atttgagaaaatcacataatttaatgtaattatatgcgtcggtgtca 7214522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 22234929 - 22234891
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtc 22234891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 30103402 - 30103357
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||    
T  30103402 atttgagaaaatcacataatt-agtgtaatcatatgtgtcggtgtca 30103357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 33950149 - 33950195
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||||||||||| | ||| || ||||||||||||||||    
T  33950149 atttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtca 33950195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 8402787 - 8402742
Alignment:
Q  248 tttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||| |||||||||||| ||||||||| || ||||||    
T  8402787 tttgagaaaatcatataattcagtgtaattatatgtctcagtgtca 8402742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 13134463 - 13134508
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||| |||||||||||||||| ||||| ||||||||||||| ||||    
T  13134463 atttaagaaaatcacataatttagtgtaattatatgtgtcgatgtc 13134508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 15029778 - 15029823
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| || ||||||||||||||||| ||||||||||| ||||||    
T  15029778 atttgaaaatatcacataattcagtgtaattatatgtgttggtgtc 15029823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 15659806 - 15659761
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  15659806 atttgagaaaatctcataattcggtgtaattatatgtgttggtgtc 15659761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 7012079 - 7012123
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||||||||| ||||||||||||||||| ||| || |||||||    
T  7012079 atttgagaaaatgacataattcagtgtgatcataggtatcggtgt 7012123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 24343520 - 24343560
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    |||||||||||| |||||||||||||| |||||| ||||||    
T  24343520 atttgagaaaattacataattcagtgtaattataggtgtcg 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 29205457 - 29205501
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||| |||||||||||||||||||| |||| | ||||||||||    
T  29205457 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 273
Target Start/End: Complemental strand, 30522963 - 30522935
Alignment:
Q  245 ttatttgagaaaatcacataattcagtgt 273  Q
    |||||||||||||||||||||||||||||    
T  30522963 ttatttgagaaaatcacataattcagtgt 30522935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 35723431 - 35723375
Alignment:
Q  247 atttgagaaaat-cacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    |||||||||||| ||||||||||| ||| |||||||||||| ||||| ||| |||||    
T  35723431 atttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 35723375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 9793 - 9738
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| | |||||||    
T  9793 atttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgt 9738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 11927132 - 11927077
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| | |||||||    
T  11927132 atttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgt 11927077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 14134712 - 14134758
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  14134712 atttgagaaaatcacataattcagtgtaattatatatgtcggtgtca 14134758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 4786384 - 4786339
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  4786384 atttaagaaaatcacataattcagtgtaattatatgtgtcggtgtc 4786339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 13844642 - 13844597
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  13844642 atttgagaaaatcacataattgagtgtaattatatgtgtcggtgtc 13844597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 26902216 - 26902159
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    |||||||||||||||||||||| |||||||||||||||||| |||  |||| ||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacac 26902159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 34897098 - 34897143
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  34897098 atttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 34897143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 11803272 - 11803331
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttgga 306  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||  | |||||||||||    
T  11803272 atttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttgga 11803331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 31236623 - 31236580
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtg 290  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||    
T  31236623 atttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 12606875 - 12606829
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||||||||||||| |||||||| ||| |||||||||||||||||||    
T  12606875 atttgagaaaatcatataattcaatgtaattatatgtgtcggtgtca 12606829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 15816175 - 15816113
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    |||||| |||||||||||||| ||||| |||||| ||||||||||| | ||||||| ||||||    
T  15816175 atttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacac 15816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 20679441 - 20679395
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||||    
T  20679441 atttgagaaaatcacatagttcagtgtaattataagtgtcggtgtca 20679395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 3025564 - 3025609
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||    
T  3025564 atttgagaaaatcacataattcagtgtaattataggtgtcagtgtc 3025609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 8847277 - 8847314
Alignment:
Q  255 aaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgtc 8847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 11944678 - 11944723
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||    
T  11944678 atttgataaaatcacataactcagtgtaattatatgtgtcggtgtc 11944723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 33405430 - 33405385
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  33405430 atttgagaaaaacacataatttagtgtaattatatgtgtcggtgtc 33405385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 7658476 - 7658520
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||||||||| |||||||||||||| ||||||| |||||||||    
T  7658476 atttgagaaaattacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 29447156 - 29447088
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaacatg 315  Q
    ||||||||||||||||||||||| ||| | || | ||||||||||||| | ||||| |||||| |||||    
T  29447156 atttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatg 29447088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 40332204 - 40332248
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||    
T  40332204 atttgagaaaatcacataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 4611547 - 4611590
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtg 290  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||    
T  4611547 atttgagaaaataacataattcagtgtaattatatgtctcggtg 4611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 18964195 - 18964234
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  18964195 agaaaatcacataattcaatgtaattatatgtgtcggtgt 18964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 286
Target Start/End: Complemental strand, 24362248 - 24362209
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtc 286  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  24362248 atttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 25566854 - 25566909
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    |||||| |||||||||||||||||||| |||| | ||||||||||| | |||||||    
T  25566854 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgt 25566909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 28385032 - 28384993
Alignment:
Q  255 aaatcacataattcagtgtgattatatgtgtcggtgtcat 294  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  28385032 aaatctcataattcagtgtaattatatgtgtcggtgtcat 28384993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 33382065 - 33382018
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcat 294  Q
    |||| ||||||| ||||||||||| || ||||||||||||||||||||    
T  33382065 atttaagaaaatgacataattcagagtaattatatgtgtcggtgtcat 33382018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 39954325 - 39954282
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtg 290  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||    
T  39954325 atttgagaaaatcacataatttagtgtaattatatgtgacggtg 39954282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 14731725 - 14731763
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgt 285  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  14731725 atttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 4948665 - 4948710
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||| | |||||||||||    
T  4948665 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 4948710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 12985405 - 12985450
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||||| ||| || |||| ||||||||||    
T  12985405 atttgagaaaatcacataattcaatgtaatcatatatgtcggtgtc 12985450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 27213560 - 27213601
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcgg 288  Q
    |||| |||||||||||||||||| ||| ||||||||||||||    
T  27213560 atttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 8293848 - 8293884
Alignment:
Q  257 atcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  8293848 atcacgtaattcagtgtaattatatgtgtcggtgtca 8293884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 135358 - 135313
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  135358 atttgagaaaatcacataattctgtgtaattatatgtgtcggtgtc 135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 7928463 - 7928508
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||    
T  7928463 atttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtc 7928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 8789596 - 8789551
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  8789596 atttgagaaaatcacataattccgtgtaattatatgtgtcggtgtc 8789551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 25093515 - 25093560
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||    
T  25093515 atttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 25093560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 11658828 - 11658868
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  11658828 atttgagaaaatcgcataattcagtgtgattatatgtgtcg 11658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 20691332 - 20691378
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||    
T  20691332 atttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtca 20691378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 40993374 - 40993336
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtc 40993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 8039881 - 8039836
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||    
T  8039881 atttgagaaaattatataattcagtgtaattatatgtgtcggtgtc 8039836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 8383270 - 8383315
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||    
T  8383270 atttgagaaaatcatataattcagtgtaattataagtgtcggtgtc 8383315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 49505200 - 49505155
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||    
T  49505200 atttgagaaaatcacataatttagtgtaattatatgtgtcagtgtc 49505155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 35222956 - 35222996
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  35222956 agaaaatcacataattcaatgtaattatatgtgtcggtgtc 35222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 10690305 - 10690266
Alignment:
Q  250 tgagaaaatcacataattcagtgtgattatatgtgtcggt 289  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  10690305 tgagaaaatcacataattcagtgtaattatatttgtcggt 10690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 11251991 - 11252035
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||    
T  11251991 atttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtca 11252035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 286
Target Start/End: Complemental strand, 32804586 - 32804547
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtc 286  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  32804586 atttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

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Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 3962841 - 3962795
Alignment:
Q  245 ttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||| ||||||| |||||| ||||||| |||||||||||||||||    
T  3962841 ttatttaagaaaataacataactcagtgttattatatgtgtcggtgt 3962795  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 11313846 - 11313808
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgt 285  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  11313846 atttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

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Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 11665957 - 11666019
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacac 309  Q
    |||||| ||||||||| |||| ||||| |||||||||||||||||| | ||| |||| |||||    
T  11665957 atttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacac 11666019  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 13807182 - 13807228
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    ||||||||||||||||||||||| | | || ||||||||||||||||    
T  13807182 atttgagaaaatcacataattcaatataataatatgtgtcggtgtca 13807228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 16192796 - 16192758
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgt 285  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  16192796 atttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 38731238 - 38731276
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  38731238 aaaatcacataattcagtgtagttatatgtgtcggtgtc 38731276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 6780465 - 6780420
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||| || |||||||| ||||||||||| ||||||    
T  6780465 atttgagaaaatcacgtagttcagtgtaattatatgtgttggtgtc 6780420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 7614461 - 7614416
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||| |||||||||||||||||||| | ||||||| ||||||||||    
T  7614461 atttaagaaaatcacataattcagtataattatatatgtcggtgtc 7614416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 15314922 - 15314877
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  15314922 atttgaaaaaatcacataatttagtgtaattatatgtgttggtgtc 15314877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 25948933 - 25948888
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||||| |||| ||||||    
T  25948933 atttgaaaaaatcacataattcagtgtaattataagtgttggtgtc 25948888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 28918014 - 28918059
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| |||||||||||||||||||| |||| | |||||||||||    
T  28918014 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 28918059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 34910330 - 34910391
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggaca 308  Q
    |||||| |||||||||||||||||||| |||| | | ||||||||| ||| ||||| |||||    
T  34910330 atttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggaca 34910391  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 45451566 - 45451611
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||| |||||| | || |||||||||||||||    
T  45451566 atttgagaaaatcacatacttcagtataataatatgtgtcggtgtc 45451611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 48202314 - 48202269
Alignment:
Q  248 tttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||||||||||||||||||| | ||| |||||||||||| ||||||    
T  48202314 tttgagaaaatcacataatttaatgtaattatatgtgtctgtgtca 48202269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 1438817 - 1438853
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgt 283  Q
    ||||||||||||||||||||||||| | |||||||||    
T  1438817 atttgagaaaatcacataattcagtataattatatgt 1438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 2941576 - 2941616
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  2941576 agaaaatcacaaaatacagtgtaattatatgtgtcggtgtc 2941616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 11493404 - 11493372
Alignment:
Q  250 tgagaaaatcacataattcagtgtgattatatg 282  Q
    |||||||||||||||||||||||| ||||||||    
T  11493404 tgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 11507515 - 11507479
Alignment:
Q  253 gaaaatcacataattcagtgtgattatatgtgtcggt 289  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  11507515 gaaaatcacataattcagtgtaattatatgtttcggt 11507479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 12704020 - 12704056
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgt 283  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  12704020 atttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 13414487 - 13414527
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||| |||||||| ||| ||||||||||||||||||    
T  13414487 agaaaatcaaataattcaatgtaattatatgtgtcggtgtc 13414527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 13845566 - 13845526
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  13845566 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 13845526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 14028025 - 14028065
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  14028025 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 14028065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 17005665 - 17005621
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||||| ||||||| |||||||||||| |||||| ||||||||||    
T  17005665 atttgataaaatcatataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 29112328 - 29112292
Alignment:
Q  245 ttatttgagaaaatcacataattcagtgtgattatat 281  Q
    |||||||||||||||| |||||||||||| |||||||    
T  29112328 ttatttgagaaaatcatataattcagtgtaattatat 29112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 29508457 - 29508497
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    |||||| ||||||| |||||||||||| |||||||||||||    
T  29508457 atttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 34307826 - 34307786
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    |||||||||||||||||| |||||||| |||||| ||||||    
T  34307826 atttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 39002045 - 39002101
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgtt 303  Q
    |||||| |||||||||||||||| ||| ||||||| |||| ||||| | ||||||||    
T  39002045 atttgaaaaaatcacataattcaatgtaattatatatgtcagtgtcgtgttggtgtt 39002101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 53193 - 53236
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtg 290  Q
    ||||||||||||||||||||||||||| |||||| |||||||||    
T  53193 atttgagaaaatcacataattcagtgtaattataagtgtcggtg 53236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 1048 - 1114
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggacacaaca 313  Q
    |||||| ||||| |||||||||||||| | |||||||||| ||||  | | ||||||||||||||||    
T  1048 atttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 6037 - 5987
Alignment:
Q  252 agaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgt 302  Q
    ||||||||||| ||| |||||| |||||||||||||||||| ||| |||||    
T  6037 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgt 5987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 23440 - 23478
Alignment:
Q  254 aaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  23440 aaaatcacataattcagtgtaattataagtgtcggtgtc 23478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 90856 - 90902
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 293  Q
    |||||||||||||| |||||||||||| ||||||| ||||| |||||    
T  90856 atttgagaaaatcatataattcagtgtaattatatatgtcgatgtca 90902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 25810 - 25769
Alignment:
Q  251 gagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||||||||| ||||| |||||| |||||||||||    
T  25810 gagaaaatcacataatttagtgtaattataagtgtcggtgtc 25769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 70291 - 70336
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    |||||| ||||| |||||||||||||| |||||| |||||||||||    
T  70291 atttgaaaaaataacataattcagtgtaattataagtgtcggtgtc 70336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 263418 - 263373
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 292  Q
    ||||||||||| ||||||||||||||| |||||| ||||| |||||    
T  263418 atttgagaaaaccacataattcagtgtaattataagtgtcagtgtc 263373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 28863 - 28907
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 291  Q
    |||| |||||||| ||||||||| ||| |||||||||||||||||    
T  28863 atttaagaaaatcgcataattcaatgtaattatatgtgtcggtgt 28907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 26406 - 26446
Alignment:
Q  247 atttgagaaaatcacataattcagtgtgattatatgtgtcg 287  Q
    ||||||||||||||||||||||| |||  ||||||||||||    
T  26406 atttgagaaaatcacataattcaatgtcgttatatgtgtcg 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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