View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12545_high_49 (Length: 229)
Name: NF12545_high_49
Description: NF12545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12545_high_49 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 41 - 226
Target Start/End: Complemental strand, 28392389 - 28392204
Alignment:
| Q |
41 |
ttaacaaggatacagatattacttgcagcacaagttatttaaggctagttagtcaattaactttttgttaataactaattctaggagttagttataactc |
140 |
Q |
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|||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28392389 |
ttaacaaggataaaaatattacttgcaacacaagttatttaaggctagttagtcaattaactttttgttaataactaattctaggagttagttataactc |
28392290 |
T |
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| Q |
141 |
gtaattgcttctagttaactaacttttcacagttttataactaaaatctcattattaaacaaagttgcaaaattataaacgctctc |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28392289 |
gtaattgcttctagttaactaacttttcacagttttataactaaaatctcattattaaacaaagttgcaaaattataaacgctctc |
28392204 |
T |
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