View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12545_low_22 (Length: 367)

Name: NF12545_low_22
Description: NF12545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12545_low_22
NF12545_low_22
[»] chr3 (87 HSPs)
chr3 (65-351)||(40161905-40162198)
chr3 (1-72)||(4024047-4024118)
chr3 (1-68)||(7181349-7181416)
chr3 (1-68)||(22103900-22103967)
chr3 (1-68)||(25149093-25149160)
chr3 (1-68)||(35868054-35868121)
chr3 (1-68)||(44543781-44543848)
chr3 (1-72)||(46845463-46845534)
chr3 (1-67)||(9499468-9499534)
chr3 (1-67)||(14428610-14428676)
chr3 (4-68)||(43868102-43868166)
chr3 (3-67)||(45252773-45252837)
chr3 (1-68)||(7051691-7051758)
chr3 (1-68)||(20862195-20862262)
chr3 (4-67)||(21756486-21756549)
chr3 (1-68)||(23700756-23700823)
chr3 (1-68)||(23719211-23719278)
chr3 (1-68)||(23737667-23737734)
chr3 (1-68)||(33868447-33868514)
chr3 (1-68)||(37728712-37728779)
chr3 (1-67)||(8321925-8321991)
chr3 (1-67)||(15996744-15996810)
chr3 (5-67)||(26593740-26593802)
chr3 (1-67)||(46878410-46878476)
chr3 (1-67)||(50647915-50647981)
chr3 (1-67)||(54782888-54782954)
chr3 (3-68)||(26221287-26221352)
chr3 (1-62)||(46703032-46703093)
chr3 (33-68)||(12050395-12050430)
chr3 (3-67)||(26058546-26058610)
chr3 (34-69)||(33868712-33868747)
chr3 (3-67)||(46049959-46050023)
chr3 (33-68)||(51284065-51284100)
chr3 (1-68)||(10015760-10015827)
chr3 (33-67)||(10220933-10220967)
chr3 (34-68)||(14428873-14428907)
chr3 (3-62)||(14758843-14758902)
chr3 (34-68)||(20862461-20862495)
chr3 (34-68)||(26806114-26806148)
chr3 (5-68)||(27687985-27688048)
chr3 (5-68)||(43701177-43701240)
chr3 (4-67)||(47066934-47066997)
chr3 (34-68)||(50647683-50647717)
chr3 (5-68)||(53361830-53361893)
chr3 (34-67)||(4024315-4024348)
chr3 (6-68)||(4759327-4759389)
chr3 (34-67)||(9779979-9780012)
chr3 (1-67)||(12683153-12683219)
chr3 (34-67)||(16434977-16435010)
chr3 (34-67)||(31531415-31531448)
chr3 (34-67)||(36005768-36005801)
chr3 (34-67)||(52058985-52059018)
chr3 (3-68)||(24087308-24087373)
chr3 (34-74)||(36099228-36099268)
chr3 (1-61)||(1572337-1572397)
chr3 (33-68)||(10044841-10044876)
chr3 (33-68)||(19897839-19897874)
chr3 (33-68)||(22832610-22832645)
chr3 (33-68)||(26306610-26306645)
chr3 (33-68)||(28875254-28875289)
chr3 (33-68)||(32963108-32963143)
chr3 (33-68)||(32978743-32978778)
chr3 (3-67)||(36098966-36099029)
chr3 (33-68)||(41392883-41392918)
chr3 (33-68)||(42801520-42801555)
chr3 (5-61)||(51489373-51489429)
chr3 (33-67)||(4759088-4759122)
chr3 (33-67)||(9780244-9780278)
chr3 (34-68)||(17591284-17591318)
chr3 (33-67)||(32978481-32978515)
chr3 (35-69)||(43978158-43978192)
chr3 (33-67)||(45513640-45513674)
chr3 (5-68)||(48904238-48904301)
chr3 (33-67)||(50726786-50726820)
chr3 (33-67)||(50786028-50786062)
chr3 (33-67)||(53361594-53361628)
chr3 (33-67)||(54604591-54604625)
chr3 (3-61)||(1111621-1111679)
chr3 (5-67)||(7251257-7251319)
chr3 (35-68)||(12906418-12906451)
chr3 (33-62)||(20918224-20918253)
chr3 (33-62)||(20927186-20927215)
chr3 (33-62)||(44542476-44542505)
chr3 (34-67)||(51283802-51283835)
chr3 (33-61)||(6784726-6784754)
chr3 (35-67)||(9795240-9795272)
chr3 (33-69)||(24813600-24813636)
[»] chr1 (67 HSPs)
chr1 (1-70)||(45039409-45039478)
chr1 (1-68)||(4102685-4102752)
chr1 (1-68)||(11741396-11741463)
chr1 (1-68)||(37951920-37951987)
chr1 (1-68)||(39497432-39497499)
chr1 (1-68)||(52431145-52431212)
chr1 (1-67)||(1039352-1039418)
chr1 (1-67)||(1046258-1046324)
chr1 (1-67)||(15811203-15811269)
chr1 (1-67)||(23541979-23542045)
chr1 (1-67)||(36694854-36694920)
chr1 (1-67)||(36710955-36711021)
chr1 (1-67)||(49907021-49907087)
chr1 (1-66)||(30289833-30289898)
chr1 (3-67)||(46075840-46075904)
chr1 (1-68)||(16576063-16576130)
chr1 (4-67)||(30290265-30290328)
chr1 (1-68)||(41855444-41855511)
chr1 (1-68)||(52601990-52602057)
chr1 (1-67)||(39363165-39363231)
chr1 (1-67)||(44646271-44646337)
chr1 (1-67)||(44649629-44649695)
chr1 (3-68)||(27037268-27037333)
chr1 (2-67)||(42872306-42872371)
chr1 (33-68)||(38920238-38920273)
chr1 (33-67)||(943640-943674)
chr1 (34-68)||(1047991-1048025)
chr1 (1-68)||(7763720-7763787)
chr1 (34-68)||(9202244-9202278)
chr1 (1-68)||(9413296-9413363)
chr1 (1-68)||(17483732-17483799)
chr1 (1-68)||(25509208-25509274)
chr1 (34-68)||(39362933-39362967)
chr1 (34-68)||(39750120-39750154)
chr1 (1-67)||(14171542-14171607)
chr1 (1-67)||(16456636-16456702)
chr1 (1-67)||(21631078-21631144)
chr1 (34-67)||(23542243-23542276)
chr1 (34-67)||(39497697-39497730)
chr1 (1-67)||(39750352-39750418)
chr1 (34-67)||(44646535-44646568)
chr1 (34-67)||(44649893-44649926)
chr1 (1-67)||(45335885-45335951)
chr1 (6-67)||(4280102-4280163)
chr1 (3-67)||(7783991-7784055)
chr1 (33-68)||(8104291-8104326)
chr1 (33-64)||(13343776-13343807)
chr1 (33-68)||(14171793-14171828)
chr1 (33-68)||(28885841-28885876)
chr1 (33-68)||(42276164-42276199)
chr1 (34-68)||(5765994-5766028)
chr1 (34-68)||(7784258-7784292)
chr1 (34-68)||(15810971-15811005)
chr1 (33-67)||(25227304-25227338)
chr1 (33-67)||(27037533-27037567)
chr1 (34-68)||(30289601-30289635)
chr1 (34-68)||(35984401-35984435)
chr1 (33-67)||(36695118-36695152)
chr1 (33-67)||(36711219-36711253)
chr1 (33-67)||(38613739-38613773)
chr1 (33-67)||(41317593-41317627)
chr1 (33-67)||(43456624-43456658)
chr1 (34-68)||(47069052-47069086)
chr1 (35-68)||(2279952-2279985)
chr1 (34-67)||(37951689-37951722)
chr1 (34-67)||(45039676-45039709)
chr1 (33-69)||(50937777-50937813)
[»] chr8 (65 HSPs)
chr8 (1-68)||(13153927-13153994)
chr8 (1-68)||(32675728-32675795)
chr8 (1-67)||(51066-51132)
chr8 (1-67)||(2944243-2944309)
chr8 (1-67)||(28192146-28192212)
chr8 (3-68)||(8251906-8251971)
chr8 (3-68)||(18754143-18754208)
chr8 (4-68)||(26016568-26016632)
chr8 (1-68)||(28579638-28579705)
chr8 (1-67)||(5162304-5162370)
chr8 (1-67)||(8948322-8948388)
chr8 (5-67)||(8951403-8951465)
chr8 (1-67)||(11798605-11798671)
chr8 (1-67)||(18455720-18455786)
chr8 (6-68)||(28572045-28572107)
chr8 (1-67)||(36177074-36177140)
chr8 (1-67)||(39029178-39029244)
chr8 (1-67)||(40741265-40741331)
chr8 (1-67)||(42885054-42885120)
chr8 (5-71)||(43654178-43654244)
chr8 (1-67)||(44251092-44251158)
chr8 (3-68)||(34568489-34568554)
chr8 (4-68)||(2152214-2152278)
chr8 (33-68)||(17856779-17856814)
chr8 (5-69)||(29598222-29598286)
chr8 (33-67)||(1774342-1774376)
chr8 (1-68)||(23487063-23487130)
chr8 (34-68)||(29279460-29279494)
chr8 (4-67)||(38878721-38878784)
chr8 (34-68)||(40530410-40530444)
chr8 (34-68)||(44250858-44250892)
chr8 (5-67)||(7758884-7758946)
chr8 (34-67)||(11798869-11798902)
chr8 (34-67)||(13154192-13154225)
chr8 (34-67)||(43653943-43653976)
chr8 (1-67)||(44502620-44502685)
chr8 (1-70)||(29806194-29806262)
chr8 (33-68)||(5593420-5593455)
chr8 (33-72)||(8797023-8797062)
chr8 (33-68)||(12802610-12802645)
chr8 (33-68)||(23688168-23688203)
chr8 (33-68)||(26016831-26016866)
chr8 (33-68)||(28965730-28965765)
chr8 (4-68)||(32475201-32475265)
chr8 (5-61)||(33865516-33865572)
chr8 (33-68)||(39029439-39029474)
chr8 (33-68)||(40529306-40529341)
chr8 (35-70)||(44580613-44580648)
chr8 (33-67)||(6050558-6050592)
chr8 (33-67)||(9035542-9035576)
chr8 (33-67)||(16998996-16999030)
chr8 (33-67)||(17069847-17069881)
chr8 (33-67)||(17578392-17578426)
chr8 (34-68)||(18111979-18112013)
chr8 (33-67)||(18641383-18641417)
chr8 (1-67)||(29279195-29279262)
chr8 (34-68)||(40741528-40741562)
chr8 (33-67)||(44888680-44888714)
chr8 (35-68)||(2944012-2944045)
chr8 (34-67)||(17856517-17856550)
chr8 (35-68)||(26990566-26990599)
chr8 (34-67)||(28864247-28864280)
chr8 (33-62)||(40785154-40785183)
chr8 (34-67)||(45283796-45283829)
chr8 (33-69)||(13568908-13568944)
[»] chr7 (42 HSPs)
chr7 (1-68)||(38858297-38858364)
chr7 (1-68)||(39871584-39871651)
chr7 (1-72)||(41252332-41252403)
chr7 (1-67)||(21295151-21295217)
chr7 (1-67)||(40300230-40300296)
chr7 (3-68)||(29286010-29286075)
chr7 (3-68)||(32814432-32814497)
chr7 (3-68)||(33858839-33858904)
chr7 (3-67)||(41026069-41026133)
chr7 (1-68)||(34979048-34979115)
chr7 (1-68)||(36646608-36646675)
chr7 (1-67)||(1275704-1275770)
chr7 (1-67)||(19920563-19920629)
chr7 (1-67)||(31457997-31458063)
chr7 (1-67)||(32872346-32872412)
chr7 (5-67)||(39197718-39197780)
chr7 (1-67)||(44510314-44510380)
chr7 (4-68)||(29177226-29177290)
chr7 (33-68)||(36698134-36698169)
chr7 (34-68)||(20075111-20075145)
chr7 (33-67)||(26255096-26255130)
chr7 (34-68)||(28060981-28061015)
chr7 (1-68)||(33381545-33381611)
chr7 (1-68)||(45907244-45907311)
chr7 (33-67)||(48521029-48521063)
chr7 (1-67)||(7449270-7449335)
chr7 (1-67)||(25247662-25247727)
chr7 (34-67)||(38428411-38428444)
chr7 (6-68)||(44547425-44547487)
chr7 (3-68)||(2289989-2290054)
chr7 (6-67)||(41003130-41003191)
chr7 (5-61)||(9140508-9140564)
chr7 (33-68)||(27813495-27813530)
chr7 (33-68)||(34012520-34012555)
chr7 (35-69)||(1574717-1574751)
chr7 (33-67)||(18113169-18113203)
chr7 (34-68)||(29176991-29177025)
chr7 (33-67)||(31581677-31581711)
chr7 (33-67)||(32118166-32118200)
chr7 (33-67)||(36711301-36711335)
chr7 (33-62)||(31769335-31769364)
chr7 (35-68)||(42541864-42541897)
[»] chr5 (44 HSPs)
chr5 (1-68)||(22527691-22527758)
chr5 (1-68)||(34662203-34662270)
chr5 (1-68)||(40004380-40004447)
chr5 (1-67)||(1265949-1266015)
chr5 (1-67)||(9828393-9828459)
chr5 (4-68)||(6673202-6673266)
chr5 (4-68)||(16127258-16127322)
chr5 (1-68)||(15190786-15190853)
chr5 (1-67)||(3497771-3497837)
chr5 (1-67)||(7951562-7951627)
chr5 (1-67)||(23286445-23286511)
chr5 (3-68)||(16153228-16153293)
chr5 (3-68)||(26894846-26894911)
chr5 (1-74)||(28041322-28041395)
chr5 (1-77)||(7940442-7940518)
chr5 (33-68)||(9020693-9020728)
chr5 (33-68)||(14913647-14913682)
chr5 (1-61)||(32478144-32478204)
chr5 (3-67)||(43060384-43060448)
chr5 (34-68)||(186362-186396)
chr5 (5-68)||(3028012-3028075)
chr5 (33-67)||(10734526-10734560)
chr5 (1-68)||(16440930-16440997)
chr5 (1-68)||(25601031-25601098)
chr5 (34-67)||(9828657-9828690)
chr5 (3-61)||(27873318-27873376)
chr5 (34-70)||(20142263-20142299)
chr5 (3-68)||(32147293-32147357)
chr5 (33-68)||(8949811-8949846)
chr5 (33-68)||(14435829-14435864)
chr5 (33-68)||(15521945-15521980)
chr5 (33-68)||(23260141-23260176)
chr5 (33-68)||(26889592-26889627)
chr5 (1-69)||(40643092-40643160)
chr5 (33-68)||(41384175-41384210)
chr5 (34-68)||(3497539-3497573)
chr5 (5-64)||(4753193-4753252)
chr5 (33-67)||(4976293-4976327)
chr5 (33-67)||(13862998-13863032)
chr5 (34-68)||(16127523-16127557)
chr5 (33-67)||(19571942-19571976)
chr5 (34-68)||(32147555-32147589)
chr5 (34-68)||(41383911-41383945)
chr5 (35-68)||(13661124-13661157)
[»] chr4 (66 HSPs)
chr4 (1-68)||(4035824-4035891)
chr4 (1-67)||(5375528-5375594)
chr4 (1-67)||(5743630-5743696)
chr4 (1-67)||(26625973-26626039)
chr4 (1-67)||(34273190-34273256)
chr4 (1-67)||(47806860-47806926)
chr4 (3-68)||(45742779-45742844)
chr4 (1-68)||(4415964-4416031)
chr4 (1-68)||(36391853-36391920)
chr4 (1-68)||(48030312-48030379)
chr4 (1-68)||(49228689-49228756)
chr4 (1-67)||(1859144-1859210)
chr4 (1-67)||(9328211-9328277)
chr4 (3-69)||(28501359-28501425)
chr4 (1-67)||(29520135-29520201)
chr4 (5-67)||(35675895-35675957)
chr4 (1-67)||(43387964-43388030)
chr4 (1-67)||(44294789-44294855)
chr4 (5-67)||(52977982-52978044)
chr4 (4-68)||(2615919-2615983)
chr4 (3-67)||(20391411-20391474)
chr4 (4-68)||(24754077-24754141)
chr4 (1-65)||(54676549-54676613)
chr4 (1-68)||(1028517-1028584)
chr4 (4-67)||(6753525-6753588)
chr4 (5-68)||(6807428-6807491)
chr4 (1-68)||(18872716-18872783)
chr4 (1-68)||(20455153-20455219)
chr4 (34-68)||(20747434-20747468)
chr4 (33-67)||(30771528-30771562)
chr4 (4-67)||(31937076-31937139)
chr4 (33-67)||(32032996-32033030)
chr4 (33-67)||(33413518-33413552)
chr4 (1-68)||(45097136-45097203)
chr4 (1-68)||(46949991-46950058)
chr4 (1-68)||(52870643-52870710)
chr4 (34-67)||(4036089-4036122)
chr4 (34-67)||(4549629-4549662)
chr4 (1-67)||(25708650-25708715)
chr4 (34-67)||(29014064-29014097)
chr4 (1-67)||(49373664-49373730)
chr4 (1-67)||(53277157-53277222)
chr4 (34-67)||(55631999-55632032)
chr4 (33-68)||(17610023-17610058)
chr4 (36-67)||(25708420-25708451)
chr4 (33-68)||(32899221-32899256)
chr4 (33-68)||(49793090-49793125)
chr4 (33-68)||(56432517-56432552)
chr4 (33-67)||(7698472-7698506)
chr4 (33-67)||(15241480-15241514)
chr4 (33-67)||(25124249-25124283)
chr4 (33-67)||(26625743-26625777)
chr4 (34-72)||(39144668-39144706)
chr4 (33-67)||(39670989-39671023)
chr4 (33-67)||(47228731-47228765)
chr4 (33-67)||(53564359-53564393)
chr4 (33-67)||(53629792-53629826)
chr4 (33-67)||(55563130-55563164)
chr4 (34-67)||(2615683-2615716)
chr4 (34-67)||(5743399-5743432)
chr4 (35-68)||(21265219-21265252)
chr4 (35-68)||(30523763-30523796)
chr4 (33-62)||(41620519-41620548)
chr4 (36-68)||(29508597-29508629)
chr4 (35-67)||(39144404-39144436)
chr4 (34-66)||(53630056-53630088)
[»] chr2 (61 HSPs)
chr2 (1-68)||(34883819-34883886)
chr2 (1-68)||(40607701-40607768)
chr2 (1-67)||(2438225-2438291)
chr2 (1-67)||(27560206-27560272)
chr2 (3-72)||(8716865-8716934)
chr2 (1-69)||(16805762-16805830)
chr2 (1-68)||(5664637-5664704)
chr2 (1-68)||(8841628-8841695)
chr2 (1-72)||(8912845-8912916)
chr2 (1-68)||(12890179-12890246)
chr2 (1-68)||(15228120-15228187)
chr2 (1-68)||(20252209-20252276)
chr2 (1-68)||(34062636-34062703)
chr2 (1-68)||(34113530-34113597)
chr2 (4-67)||(36131002-36131065)
chr2 (1-68)||(40680726-40680793)
chr2 (1-68)||(41450515-41450582)
chr2 (5-67)||(7491844-7491906)
chr2 (1-67)||(17408265-17408331)
chr2 (1-67)||(23788969-23789035)
chr2 (1-67)||(32120944-32121010)
chr2 (33-68)||(11201682-11201717)
chr2 (1-69)||(16845044-16845111)
chr2 (4-67)||(3095299-3095362)
chr2 (34-68)||(16108214-16108248)
chr2 (1-68)||(22897390-22897457)
chr2 (1-68)||(25624732-25624798)
chr2 (5-68)||(26322268-26322331)
chr2 (1-68)||(31751068-31751135)
chr2 (33-67)||(34113789-34113823)
chr2 (34-68)||(39833738-39833772)
chr2 (34-67)||(2438489-2438522)
chr2 (34-67)||(7492108-7492141)
chr2 (3-69)||(9701068-9701134)
chr2 (35-68)||(22182929-22182962)
chr2 (34-67)||(22897655-22897688)
chr2 (34-67)||(45474351-45474384)
chr2 (33-65)||(42629373-42629405)
chr2 (33-68)||(4711727-4711762)
chr2 (33-68)||(15227889-15227924)
chr2 (33-68)||(41422511-41422546)
chr2 (33-68)||(41494625-41494660)
chr2 (34-68)||(1360055-1360089)
chr2 (33-67)||(2060316-2060350)
chr2 (33-67)||(2200243-2200277)
chr2 (33-67)||(7116302-7116336)
chr2 (34-68)||(10757773-10757807)
chr2 (34-72)||(15404442-15404480)
chr2 (33-67)||(18374707-18374741)
chr2 (33-67)||(24345681-24345715)
chr2 (33-67)||(28566151-28566185)
chr2 (1-52)||(29239564-29239615)
chr2 (35-68)||(2199977-2200010)
chr2 (35-68)||(8841396-8841429)
chr2 (34-67)||(11201947-11201980)
chr2 (35-64)||(16456615-16456644)
chr2 (34-67)||(17408034-17408067)
chr2 (35-68)||(23083514-23083547)
chr2 (34-67)||(29239333-29239366)
chr2 (35-67)||(13215825-13215857)
chr2 (33-69)||(29830757-29830793)
[»] chr6 (43 HSPs)
chr6 (1-67)||(9038642-9038708)
chr6 (1-67)||(34301803-34301869)
chr6 (3-68)||(30248646-30248711)
chr6 (1-68)||(402592-402659)
chr6 (1-68)||(9388762-9388829)
chr6 (1-68)||(13321297-13321364)
chr6 (1-68)||(25045614-25045681)
chr6 (1-67)||(8743188-8743253)
chr6 (1-67)||(23398110-23398176)
chr6 (33-68)||(4844399-4844434)
chr6 (33-67)||(231108-231142)
chr6 (1-68)||(5457411-5457478)
chr6 (1-72)||(11847566-11847637)
chr6 (33-67)||(11847835-11847869)
chr6 (1-68)||(19097772-19097839)
chr6 (34-68)||(34741730-34741764)
chr6 (1-68)||(34915514-34915581)
chr6 (1-67)||(287385-287451)
chr6 (1-67)||(925904-925970)
chr6 (34-67)||(9388529-9388562)
chr6 (35-68)||(12144043-12144076)
chr6 (5-67)||(13648104-13648166)
chr6 (6-68)||(15498628-15498690)
chr6 (33-69)||(13901639-13901675)
chr6 (3-68)||(25197151-25197216)
chr6 (3-67)||(1147240-1147304)
chr6 (3-67)||(1730075-1730138)
chr6 (33-68)||(13647867-13647902)
chr6 (33-68)||(16122517-16122552)
chr6 (33-68)||(16272971-16273006)
chr6 (33-68)||(23604459-23604494)
chr6 (3-67)||(31091445-31091509)
chr6 (33-67)||(2090658-2090692)
chr6 (33-67)||(10195996-10196030)
chr6 (1-68)||(12143778-12143845)
chr6 (34-68)||(23397878-23397912)
chr6 (33-67)||(33487833-33487867)
chr6 (33-70)||(1729839-1729876)
chr6 (34-67)||(1779784-1779817)
chr6 (34-67)||(6418135-6418168)
chr6 (34-67)||(13866593-13866626)
chr6 (33-62)||(17227530-17227559)
chr6 (33-61)||(8637278-8637306)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-68)||(12064-12130)
scaffold0122 (34-68)||(12328-12362)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-68)||(51653-51720)
[»] scaffold0012 (2 HSPs)
scaffold0012 (5-68)||(47639-47702)
scaffold0012 (34-67)||(47904-47937)
[»] scaffold0604 (2 HSPs)
scaffold0604 (1-67)||(3754-3819)
scaffold0604 (33-67)||(3525-3559)
[»] scaffold0008 (1 HSPs)
scaffold0008 (6-68)||(259098-259160)
[»] scaffold0368 (1 HSPs)
scaffold0368 (2-67)||(8218-8283)
[»] scaffold0002 (1 HSPs)
scaffold0002 (33-68)||(355334-355369)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-67)||(14319-14385)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-67)||(3438-3503)
[»] scaffold0025 (2 HSPs)
scaffold0025 (34-67)||(65378-65411)
scaffold0025 (33-68)||(65640-65675)
[»] scaffold0163 (1 HSPs)
scaffold0163 (33-68)||(1449-1484)
[»] scaffold0020 (1 HSPs)
scaffold0020 (33-68)||(164213-164248)
[»] scaffold0674 (1 HSPs)
scaffold0674 (33-67)||(5151-5185)
[»] scaffold0549 (1 HSPs)
scaffold0549 (33-67)||(10185-10219)
[»] scaffold0339 (1 HSPs)
scaffold0339 (33-67)||(7143-7177)
[»] scaffold0240 (2 HSPs)
scaffold0240 (33-67)||(18497-18531)
scaffold0240 (33-67)||(18759-18793)
[»] scaffold0237 (2 HSPs)
scaffold0237 (34-68)||(6613-6647)
scaffold0237 (33-69)||(6349-6385)
[»] scaffold0107 (1 HSPs)
scaffold0107 (33-67)||(48654-48688)
[»] scaffold1283 (1 HSPs)
scaffold1283 (34-66)||(27-59)


Alignment Details
Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 65 - 351
Target Start/End: Complemental strand, 40162198 - 40161905
Alignment:
Q  65 gtatctttgttcttgttcaagaggaacatgatgcgtttttcgtttgtttaagagagataaggtataaaatgtt--gtgaatttatcaaagagaggaatat 162  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  40162198 gtatctttgttcttgttcaagaggaacatgatgcgcttttcgtttgtttaagagagataaggtataaaatgttttgtgaatttatcaaagagaggaatat 40162099  T
Q  163 tgtaacatgttgtatttgaaccattagatgaatcacacggctcaaatttgcctgactgtgtaaatgcaggatttctttgaccgcagagaatctgtatcac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40162098 tgtaacatgttgtatttgaaccattagatgaatcacacggctcacatttgcctgactgtgtaaattcaggatttctttgaccgcagagaatctgtatcac 40161999  T
Q  263 -----acaaataccccccaccaccggctgcaactagtactagtatagtagcagagaatcgtgtgtgaagagaaaattactaatatggcgccaat 351  Q
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40161998 acaacacaaataccccccaccaccggctgcaactagtactagtatagtagcagagaatcgtgtgtgaagagaaaattactaatatggcgccaat 40161905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4024118 - 4024047
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatcttt 72  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||||    
T  4024118 aggggtcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattagggacggagggagtaacttt 4024047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7181416 - 7181349
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  7181416 aggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagtat 7181349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22103900 - 22103967
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  22103900 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 22103967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25149093 - 25149160
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  25149093 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 25149160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35868054 - 35868121
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  35868054 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 35868121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44543848 - 44543781
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  44543848 aggggtcttataaaaagggacaaaagaaattctcaaaagggtcttataattagggacggagggagtat 44543781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 46845463 - 46845534
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatcttt 72  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||||||    
T  46845463 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtatcttt 46845534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9499468 - 9499534
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  9499468 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14428676 - 14428610
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  14428676 aggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagta 14428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 43868166 - 43868102
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  43868166 ggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 43868102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 45252837 - 45252773
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  45252837 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7051691 - 7051758
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||    
T  7051691 aggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagtat 7051758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20862262 - 20862195
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||| |||||||    
T  20862262 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggatggagtat 20862195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 21756549 - 21756486
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  21756549 ggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 21756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23700756 - 23700823
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  23700756 aggggtcttataaaaagggacaaaaaaaattctcaaaaaggtcttataattagggacggagggagtat 23700823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23719211 - 23719278
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  23719211 aggggtcttataaaaagggacaaaaaaaattctcaaaaaggtcttataattagggacggagggagtat 23719278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23737667 - 23737734
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  23737667 aggggtcttataaaaagggacaaaaaaaattctcaaaaaggtcttataattagggacggagggagtat 23737734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33868514 - 33868447
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||    
T  33868514 aggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagtat 33868447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37728779 - 37728712
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  37728779 aggggtcttataaaaagggacaacaaatattctcaaaagggtcttataattagggacggagggagtat 37728712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8321991 - 8321925
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  8321991 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 8321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15996744 - 15996810
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  15996744 aggggtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggaggtagta 15996810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 26593740 - 26593802
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  26593740 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 26593802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 46878410 - 46878476
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||| ||||||||||||||    
T  46878410 aggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattaaggacggagggagta 46878476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 50647915 - 50647981
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||| |||||||||||||    
T  50647915 aggggtcttataaaaagggacaaaattttttctcaaaagggtcttataattagagacggagggagta 50647981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 54782888 - 54782954
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||    
T  54782888 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacgaagggagta 54782954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 26221352 - 26221287
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||    
T  26221352 gggtcttataaaaagggacaaaaaaaattctcaaaagagtcttataattagggacggagggagtat 26221287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 46703093 - 46703032
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagg 62  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  46703093 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagg 46703032  T

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Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 12050395 - 12050430
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  12050395 tcaaaagggtcttataattagggacggagggagtat 12050430  T

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Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 26058610 - 26058546
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  26058610 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggaagta 26058546  T

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Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 33868712 - 33868747
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtatc 69  Q
    ||||||||||||||||||||||||||||||||||||    
T  33868712 caaaagggtcttataattagggacggagggagtatc 33868747  T

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Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 46049959 - 46050023
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||    
T  46049959 gggtcttataaaaaaggacaaaaaaatttctcaaaagggtcttataattagggacggagggagta 46050023  T

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Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 51284065 - 51284100
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  51284065 tcaaaagggtcttataattagggacggagggagtat 51284100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10015760 - 10015827
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||    
T  10015760 aggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 10015827  T

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Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 10220967 - 10220933
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  10220967 tcaaaagggtcttataattagggacggagggagta 10220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 14428873 - 14428907
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  14428873 caaaagggtcttataattagggacggagggagtat 14428907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 14758902 - 14758843
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagg 62  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  14758902 gggtcttataaaaagggacaaaaaaaattatcaaaagggtcttataattagggacggagg 14758843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 20862461 - 20862495
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  20862461 caaaagggtcttataattagggacggagggagtat 20862495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 26806148 - 26806114
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  26806148 caaaagggtcttataattagggacggagggagtat 26806114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 27688048 - 27687985
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||       ||||||||||||||||||||| ||||||||| |||||    
T  27688048 gtcttataaaaagggacaaaaaaatttgtcaaaagggtcttataattaaggacggaggtagtat 27687985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 43701240 - 43701177
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||| ||||||||||    
T  43701240 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacagagggagtat 43701177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 47066997 - 47066934
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  47066997 ggtcttataaaaagggacaaaaaatattctcaaaagggtcttataattagggacggaggaagta 47066934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 50647717 - 50647683
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  50647717 caaaagggtcttataattagggacggagggagtat 50647683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 53361830 - 53361893
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  53361830 gtcttataaaaagggacaaaaaaaattctcaaaatggtcttataattagggacggagggagtat 53361893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 4024315 - 4024348
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  4024315 caaaagggtcttataattagggacggagggagta 4024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 4759327 - 4759389
Alignment:
Q  6 tcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  4759327 tcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 4759389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 9780012 - 9779979
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  9780012 caaaagggtcttataattagggacggagggagta 9779979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12683153 - 12683219
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||| ||        |||||| ||||||||||||||||||||||||||||    
T  12683153 aggggtcttataaaaagggactaaaaaaattctcaaaatggtcttataattagggacggagggagta 12683219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 16435010 - 16434977
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  16435010 caaaagggtcttataattagggacggagggagta 16434977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 31531415 - 31531448
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  31531415 caaaagggtcttataattagggacggagggagta 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 36005768 - 36005801
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  36005768 caaaagggtcttataattagggacggagggagta 36005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 52059018 - 52058985
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  52059018 caaaagggtcttataattagggacggagggagta 52058985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 24087308 - 24087373
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||| ||||||||        |||||||||||||||||||||||||||||| |||||    
T  24087308 gggtcttataaaacgggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 24087373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 36099228 - 36099268
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtatctttgt 74  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  36099228 caaaagggtcttataattagggacagagggagtatttttgt 36099268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1572397 - 1572337
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggag 61  Q
    |||||||||||||||| |||||||        |||||||||||||||||||||||||||||    
T  1572397 aggggtcttataaaaaaggacaaaaaaaattctcaaaagggtcttataattagggacggag 1572337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 10044876 - 10044841
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||| |||||||||||||||||||||||||||    
T  10044876 tcaaaaggatcttataattagggacggagggagtat 10044841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 19897839 - 19897874
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  19897839 tcaaaagggtcttataattagggacggaggtagtat 19897874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 22832610 - 22832645
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||| |||||||    
T  22832610 tcaaaagggtcttataattagggacggaaggagtat 22832645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 26306610 - 26306645
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||| |||||||||||||    
T  26306610 tcaaaagggtcttataattaggaacggagggagtat 26306645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 28875254 - 28875289
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  28875254 tcaaaagggtcttataattagggacggaggtagtat 28875289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 32963108 - 32963143
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||| |||||||||||||||||||||||||||    
T  32963108 tcaaaaggatcttataattagggacggagggagtat 32963143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 32978743 - 32978778
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32978743 tcaaaagggtcctataattagggacggagggagtat 32978778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 36099029 - 36098966
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||    
T  36099029 gggtcttataaaaagggacaaaaaaattc-tcaaaagggtcttataattagggacggatggagta 36098966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 41392883 - 41392918
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  41392883 tcaaaagggtcttataattagggacggaggtagtat 41392918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 42801555 - 42801520
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  42801555 tcaaaagggtcttataattagggacggaggtagtat 42801520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 51489429 - 51489373
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggag 61  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  51489429 gtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggag 51489373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 4759122 - 4759088
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  4759122 tcaaaagggtcttataattagggacggaggtagta 4759088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 9780244 - 9780278
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||| |||||    
T  9780244 tcaaaagggtcttataattagggacggagagagta 9780278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 17591318 - 17591284
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||| |||||||||||    
T  17591318 caaaagggtcttataattagggatggagggagtat 17591284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 32978515 - 32978481
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||| ||||||||||||||||||||||||||    
T  32978515 tcaaaaggatcttataattagggacggagggagta 32978481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 43978192 - 43978158
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtatc 69  Q
    |||||||||||||||||||||||||||| ||||||    
T  43978192 aaaagggtcttataattagggacggaggaagtatc 43978158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 45513640 - 45513674
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  45513640 tcaaaagggtcttataattagggacggaggtagta 45513674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 48904238 - 48904301
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||        | |||||||||||||||||||||||||||| |||||    
T  48904238 gtcttataaaaagggacaaattatttttttaaaagggtcttataattagggacggaggtagtat 48904301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 50726786 - 50726820
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||| ||||||||||||||||    
T  50726786 tcaaaagggtcttataatcagggacggagggagta 50726820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 50786062 - 50786028
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||| ||||||||||||||||    
T  50786062 tcaaaagggtcttataatcagggacggagggagta 50786028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 53361628 - 53361594
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||| ||||||    
T  53361628 tcaaaagggtcttataattagggacggatggagta 53361594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 54604591 - 54604625
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||| ||||||||||||||    
T  54604591 tcaaaagggtcttataattaaggacggagggagta 54604625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 1111621 - 1111679
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggag 61  Q
    ||||||||||||||| ||||||        |||||||||||||||||||||||||||||    
T  1111621 gggtcttataaaaagagacaaaaaaatttctcaaaagggtcttataattagggacggag 1111679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 7251257 - 7251319
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||        | ||| |||||||||||||||||||||||||||||    
T  7251257 gtcttataaaaagggacaaaaaaaattcttaaaggggtcttataattagggacggagggagta 7251319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 12906418 - 12906451
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||| |||||    
T  12906418 aaaagggtcttataattagggacggaggtagtat 12906451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 20918253 - 20918224
Alignment:
Q  33 tcaaaagggtcttataattagggacggagg 62  Q
    ||||||||||||||||||||||||||||||    
T  20918253 tcaaaagggtcttataattagggacggagg 20918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 20927215 - 20927186
Alignment:
Q  33 tcaaaagggtcttataattagggacggagg 62  Q
    ||||||||||||||||||||||||||||||    
T  20927215 tcaaaagggtcttataattagggacggagg 20927186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 44542476 - 44542505
Alignment:
Q  33 tcaaaagggtcttataattagggacggagg 62  Q
    ||||||||||||||||||||||||||||||    
T  44542476 tcaaaagggtcttataattagggacggagg 44542505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 51283835 - 51283802
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||| |||||||||    
T  51283835 caaaagggtcttataattagggacagagggagta 51283802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 6784726 - 6784754
Alignment:
Q  33 tcaaaagggtcttataattagggacggag 61  Q
    |||||||||||||||||||||||||||||    
T  6784726 tcaaaagggtcttataattagggacggag 6784754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 9795240 - 9795272
Alignment:
Q  35 aaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||| ||||||||||||||||    
T  9795240 aaaagggtcttataataagggacggagggagta 9795272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 24813636 - 24813600
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtatc 69  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  24813636 tcaaaaggatcttataattagggacggaggtagtatc 24813600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45039478 - 45039409
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatct 70  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  45039478 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtatct 45039409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4102685 - 4102752
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  4102685 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 4102752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11741463 - 11741396
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  11741463 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 11741396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37951920 - 37951987
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  37951920 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 37951987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39497499 - 39497432
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  39497499 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 39497432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 52431145 - 52431212
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  52431145 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 52431212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1039352 - 1039418
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  1039352 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1046258 - 1046324
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  1046258 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15811203 - 15811269
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  15811203 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 15811269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23542045 - 23541979
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  23542045 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 23541979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36694920 - 36694854
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  36694920 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 36694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36711021 - 36710955
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  36711021 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 36710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 49907087 - 49907021
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  49907087 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 49907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30289833 - 30289898
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagt 66  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  30289833 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagt 30289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 46075840 - 46075904
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  46075840 gggtcttataaaaagggacaaaaaatattctcaaaagggtcttataattagggacggagggagta 46075904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16576063 - 16576130
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||    
T  16576063 aggggtcttataaaaagggacaaaaaaaattatcaaaagagtcttataattagggacggagggagtat 16576130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 30290328 - 30290265
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  30290328 ggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagta 30290265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41855444 - 41855511
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||| |||||||    
T  41855444 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggatggagtat 41855511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 52602057 - 52601990
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||||||    
T  52602057 aggggtcttataaaaagggacaaaaaaaattcttaaaagggtcttataattagggacggagggagtat 52601990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39363165 - 39363231
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  39363165 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 39363231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44646337 - 44646271
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||    
T  44646337 aggggtcttataaaaagggacaaaaaaaaatttcaaaagggtcttataattagggacggaaggagta 44646271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44649695 - 44649629
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  44649695 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 44649629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 27037333 - 27037268
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  27037333 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 27037268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 42872306 - 42872371
Alignment:
Q  2 ggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||    
T  42872306 ggggtcttataaaaagggacaaatttttttttcaaaagggtcttacaattagggacggagggagta 42872371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 38920273 - 38920238
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  38920273 tcaaaagggtcttataattagggacggagggagtat 38920238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 943640 - 943674
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  943640 tcaaaagggtcttataattagggacggagggagta 943674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 1048025 - 1047991
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  1048025 caaaagggtcttataattagggacggagggagtat 1047991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7763720 - 7763787
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||| |||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  7763720 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 7763787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 9202278 - 9202244
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  9202278 caaaagggtcttataattagggacggagggagtat 9202244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9413296 - 9413363
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||    
T  9413296 aggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 9413363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17483799 - 17483732
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||| ||||||        |||||||||||||||||||||||||||||| |||||    
T  17483799 aggggtcttataaaaagagacaaattattttttcaaaagggtcttataattagggacggaggtagtat 17483732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25509274 - 25509208
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  25509274 aggggtcttataaaaagggacaaaaaaattc-tcaaaagggtcttataattagggacggaggtagtat 25509208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 39362967 - 39362933
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  39362967 caaaagggtcttataattagggacggagggagtat 39362933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 39750154 - 39750120
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  39750154 caaaagggtcttataattagggacggagggagtat 39750120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14171607 - 14171542
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||| |||||||||||||    
T  14171607 aggggtcttataaaaagggacaaaaaaattc-tcaaaagggtcttataattagagacggagggagta 14171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16456702 - 16456636
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||| |        ||| |||||||||||||||||||||||||||||||    
T  16456702 aggggtcttataaaaagggacagaaaaatttctcagaagggtcttataattagggacggagggagta 16456636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21631078 - 21631144
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||         |||||||||||||||||||||||||||||| ||||    
T  21631078 aggggtcttataaaaagggacaatttgtttcttcaaaagggtcttataattagggacggaggtagta 21631144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 23542243 - 23542276
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  23542243 caaaagggtcttataattagggacggagggagta 23542276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 39497697 - 39497730
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  39497697 caaaagggtcttataattagggacggagggagta 39497730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39750352 - 39750418
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||| |||||        ||||||||||||||||||||||||| |||||||||    
T  39750352 aggggtcttataaaaaggaacaaaaaaaattctcaaaagggtcttataattagggacagagggagta 39750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 44646535 - 44646568
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  44646535 caaaagggtcttataattagggacggagggagta 44646568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 44649893 - 44649926
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  44649893 caaaagggtcttataattagggacggagggagta 44649926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 45335951 - 45335885
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||| |||||||        |||||||||||||||||||||||| ||||||||||    
T  45335951 aggggtcttataaaaaaggacaaaaaaaattctcaaaagggtcttataattagggagggagggagta 45335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 4280102 - 4280163
Alignment:
Q  6 tcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  4280102 tcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagta 4280163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 7784055 - 7783991
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||| ||||||||||        |||||||||| ||||||||||||||||||||||||    
T  7784055 gggtcttataataagggacaaaaaaaattctcaaaagggtattataattagggacggagggagta 7783991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 8104291 - 8104326
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||| ||||||||||||||||||||||||||||||    
T  8104291 tcaaaggggtcttataattagggacggagggagtat 8104326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 64
Target Start/End: Complemental strand, 13343807 - 13343776
Alignment:
Q  33 tcaaaagggtcttataattagggacggaggga 64  Q
    ||||||||||||||||||||||||||||||||    
T  13343807 tcaaaagggtcttataattagggacggaggga 13343776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 14171793 - 14171828
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14171793 tcaaaagggtcctataattagggacggagggagtat 14171828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 28885876 - 28885841
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  28885876 tcaaaagggtcttataattagggacggaggtagtat 28885841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 42276164 - 42276199
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  42276164 tcaaaagggtcttataattagggacggaggtagtat 42276199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 5765994 - 5766028
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||| |||||    
T  5765994 caaaagggtcttataattagggacggaggtagtat 5766028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 7784258 - 7784292
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||| ||||||||||||||||||||||||||||    
T  7784258 caaaagagtcttataattagggacggagggagtat 7784292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 15811005 - 15810971
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||| |||||||    
T  15811005 caaaagggtcttataattagggacggatggagtat 15810971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 25227338 - 25227304
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  25227338 tcaaaagggtcttataattagggacggaggtagta 25227304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 27037533 - 27037567
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  27037533 tcaaaagggtcttataattagggacggaggtagta 27037567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 30289635 - 30289601
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||| ||||||||||||||||||||||||||||    
T  30289635 caaaagagtcttataattagggacggagggagtat 30289601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 35984435 - 35984401
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||| |||||||    
T  35984435 caaaagggtcttataattagggacggaaggagtat 35984401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 36695118 - 36695152
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||| |||||||||    
T  36695118 tcaaaagggtcttataattagggacagagggagta 36695152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 36711219 - 36711253
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||| |||||||||    
T  36711219 tcaaaagggtcttataattagggacagagggagta 36711253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 38613739 - 38613773
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  38613739 tcaaaagggtcttataattagggacggaggtagta 38613773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 41317627 - 41317593
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  41317627 tcaaaagggtcttataattagggacggaggtagta 41317593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 43456624 - 43456658
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  43456624 tcaaaagggtcttataattagggacggaggtagta 43456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 47069052 - 47069086
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||| |||||||    
T  47069052 caaaagggtcttataattagggacggatggagtat 47069086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 2279985 - 2279952
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||| |||||    
T  2279985 aaaagggtcttataattagggacggaggaagtat 2279952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 37951722 - 37951689
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    |||||||||| |||||||||||||||||||||||    
T  37951722 caaaagggtcatataattagggacggagggagta 37951689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 45039676 - 45039709
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||| ||||    
T  45039676 caaaagggtcttataattagggacggaggaagta 45039709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 50937813 - 50937777
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtatc 69  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  50937813 tcaaaatggtcttataattagggacggaggtagtatc 50937777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13153994 - 13153927
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  13153994 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 13153927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32675728 - 32675795
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  32675728 aggggtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggagggagtat 32675795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 51066 - 51132
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  51066 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2944243 - 2944309
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  2944243 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 2944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28192146 - 28192212
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  28192146 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 28192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 8251906 - 8251971
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  8251906 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 8251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 18754208 - 18754143
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  18754208 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 18754143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 26016632 - 26016568
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  26016632 ggtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggagggagtat 26016568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 28579705 - 28579638
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  28579705 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 28579638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5162370 - 5162304
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  5162370 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 5162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8948322 - 8948388
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||    
T  8948322 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggatggagta 8948388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 8951403 - 8951465
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  8951403 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11798671 - 11798605
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||    
T  11798671 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacagagggagta 11798605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18455786 - 18455720
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        | |||||||||||||||||||||||||||||||||    
T  18455786 aggggtcttataaaaagggacaaaaaaaattcttaaaagggtcttataattagggacggagggagta 18455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 28572107 - 28572045
Alignment:
Q  6 tcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  28572107 tcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 28572045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36177074 - 36177140
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||    
T  36177074 aggggtcttataaaaagggacaaaaaaaattctcaaaagagtcttataattagggacggagggagta 36177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39029244 - 39029178
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||    
T  39029244 aggggtcttataaaaaaggacaaaaaattttctcaaaagggtcttataattagggacggagggagta 39029178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40741331 - 40741265
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||    
T  40741331 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtattataattagggacggagggagta 40741265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42885120 - 42885054
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  42885120 aggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggagggagta 42885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 43654178 - 43654244
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatctt 71  Q
    ||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||    
T  43654178 gtcttataaaaagggacaaaaaaaattctcaaaagagtcttataattagggacggagggagtatctt 43654244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44251092 - 44251158
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||    
T  44251092 aggggtcttataaaaagggacaaaaaaaattctcaaaatggtcttataattagggacggagggagta 44251158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 34568554 - 34568489
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||| ||||||||||        ||||||||||||||||||||||||||||||||||||    
T  34568554 gggtcttataataagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 34568489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 2152214 - 2152278
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  2152214 ggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 2152278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 17856779 - 17856814
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  17856779 tcaaaagggtcttataattagggacggagggagtat 17856814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 29598286 - 29598222
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatc 69  Q
    ||||||||||||||||||||        ||||||||||||||||||||| |||||||||||||||    
T  29598286 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagagacggagggagtatc 29598222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 1774376 - 1774342
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  1774376 tcaaaagggtcttataattagggacggagggagta 1774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23487130 - 23487063
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||    
T  23487130 aggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 23487063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 29279460 - 29279494
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  29279460 caaaagggtcttataattagggacggagggagtat 29279494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 38878784 - 38878721
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||        ||||||||||||||||||||| |||||||||||||    
T  38878784 ggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagagacggagggagta 38878721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 40530410 - 40530444
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  40530410 caaaagggtcttataattagggacggagggagtat 40530444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 44250892 - 44250858
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  44250892 caaaagggtcttataattagggacggagggagtat 44250858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 7758884 - 7758946
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||    
T  7758884 gtcttataaaaagggacaaaaaatattctcaaaagtgtcttataattagggacggagggagta 7758946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 11798869 - 11798902
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  11798869 caaaagggtcttataattagggacggagggagta 11798902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 13154192 - 13154225
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  13154192 caaaagggtcttataattagggacggagggagta 13154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 43653976 - 43653943
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  43653976 caaaagggtcttataattagggacggagggagta 43653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44502685 - 44502620
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||    
T  44502685 aggggtcttataaaaagggacaaaaaaaatc-tcaaaaggatcttataattagggacggagggagta 44502620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29806194 - 29806262
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatct 70  Q
    ||||||||||||||||||||||||        |||||||||| ||||||||||||||||||| |||||||    
T  29806194 aggggtcttataaaaagggacaaaaaaattc-tcaaaagggttttataattagggacggaggtagtatct 29806262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 5593455 - 5593420
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||| |||||||    
T  5593455 tcaaaagggtcttataattagggacggaaggagtat 5593420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 8797062 - 8797023
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtatcttt 72  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  8797062 tcaaaagggtcttataattaggaacggaggtagtatcttt 8797023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 12802645 - 12802610
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  12802645 tcaaaagggtcttataattagggacggaggtagtat 12802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 23688168 - 23688203
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  23688168 tcaaaagggtcttataattagggacggaggtagtat 23688203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 26016831 - 26016866
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26016831 tcaaaagggtcctataattagggacggagggagtat 26016866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 28965730 - 28965765
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||| ||||||    
T  28965730 tcaaaagggtcttataattagggacggagagagtat 28965765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 32475201 - 32475265
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||         |||||||||||||||||||||||| ||||||||||    
T  32475201 ggtcttataaaaagggacaaaaaaaattcccaaaagggtcttataattagggacagagggagtat 32475265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 33865516 - 33865572
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggag 61  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  33865516 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggag 33865572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 39029439 - 39029474
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39029439 tcaaaagggtcctataattagggacggagggagtat 39029474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 40529341 - 40529306
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||| |||||||||||||||||||||||||||    
T  40529341 tcaaaaggatcttataattagggacggagggagtat 40529306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 70
Target Start/End: Complemental strand, 44580648 - 44580613
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtatct 70  Q
    |||||||||||||||||||||||||||| |||||||    
T  44580648 aaaagggtcttataattagggacggaggtagtatct 44580613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 6050558 - 6050592
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  6050558 tcaaaagggtcttataattagggacggaggtagta 6050592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 9035542 - 9035576
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||| ||||||||||||||||||||||||||||    
T  9035542 tcaaaatggtcttataattagggacggagggagta 9035576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 16999030 - 16998996
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||| ||||||||||||||    
T  16999030 tcaaaagggtcttataattatggacggagggagta 16998996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 17069847 - 17069881
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  17069847 tcaaaagggtcttataattagggacggaggtagta 17069881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 17578426 - 17578392
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  17578426 tcaaaagggtcttataattagggacggaggtagta 17578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 18111979 - 18112013
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||| |||||    
T  18111979 caaaagggtcttataattagggacggaggtagtat 18112013  T

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Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 18641383 - 18641417
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  18641383 tcaaaagggtcttataattagggacggaggtagta 18641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29279262 - 29279195
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaaggg-tcttataattagggacggagggagta 67  Q
    |||| |||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||    
T  29279262 agggatcttataaaaagggacaaaaaaaattatcaaaaggggtcttataattagggacggagggagta 29279195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 40741528 - 40741562
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||| |||||||||||||||||||||||||||||    
T  40741528 caaaatggtcttataattagggacggagggagtat 40741562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 44888714 - 44888680
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  44888714 tcaaaagggtcttataattagggacggaggtagta 44888680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 2944045 - 2944012
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||| ||||||||||||||||||||||||    
T  2944045 aaaagggtcctataattagggacggagggagtat 2944012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 17856550 - 17856517
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||| ||||||||||||||    
T  17856550 caaaagggtcttataattaaggacggagggagta 17856517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 26990599 - 26990566
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    |||| |||||||||||||||||||||||||||||    
T  26990599 aaaaaggtcttataattagggacggagggagtat 26990566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 28864280 - 28864247
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||| ||||||||||    
T  28864280 caaaagggtcttataattagggatggagggagta 28864247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 40785154 - 40785183
Alignment:
Q  33 tcaaaagggtcttataattagggacggagg 62  Q
    ||||||||||||||||||||||||||||||    
T  40785154 tcaaaagggtcttataattagggacggagg 40785183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 45283796 - 45283829
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||| ||||    
T  45283796 caaaagggtcttataattagggacggaggtagta 45283829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 13568908 - 13568944
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtatc 69  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  13568908 tcaaaagggtcttataattaaggacggaggtagtatc 13568944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 38858364 - 38858297
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  38858364 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 38858297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39871584 - 39871651
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  39871584 aggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagtat 39871651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41252332 - 41252403
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatcttt 72  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||||    
T  41252332 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaccttt 41252403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21295217 - 21295151
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  21295217 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40300296 - 40300230
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  40300296 aggggtcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattagggacggagggagta 40300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 29286010 - 29286075
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  29286010 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 29286075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 32814497 - 32814432
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  32814497 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 32814432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 33858839 - 33858904
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  33858839 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 33858904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 41026069 - 41026133
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  41026069 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34979048 - 34979115
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||    
T  34979048 aggggtcttataaaaagggacaaaaaaaattctcaaaagagtcttataattagggacggagggagtat 34979115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 36646608 - 36646675
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||| ||||||||||||||||||||||    
T  36646608 aggggtcttataaaaagggacaaaaagaattctcaaaagggtcttctaattagggacggagggagtat 36646675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1275704 - 1275770
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||| ||||||||||    
T  1275704 aggggtcttataaaaagggacaaaaaaaattatcaaaagggtcttataattagggatggagggagta 1275770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19920629 - 19920563
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||| |||||        |||||||||||||||||||||||||||||||||||    
T  19920629 aggggtcttataaaaaggaacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 19920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31458063 - 31457997
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  31458063 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggaagta 31457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32872346 - 32872412
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  32872346 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 39197780 - 39197718
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  39197780 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 39197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44510314 - 44510380
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||    
T  44510314 aggggtcttataaaaagggacaaattattttttcaaaatggtcttataattagggacggagggagta 44510380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 29177226 - 29177290
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||    
T  29177226 ggtcttataaaaagggacaaaaaatattctcaaaaggatcttataattagggacggagggagtat 29177290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 36698134 - 36698169
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  36698134 tcaaaagggtcttataattagggacggagggagtat 36698169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 20075111 - 20075145
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  20075111 caaaagggtcttataattagggacggagggagtat 20075145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 26255130 - 26255096
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  26255130 tcaaaagggtcttataattagggacggagggagta 26255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 28060981 - 28061015
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  28060981 caaaagggtcttataattagggacggagggagtat 28061015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33381545 - 33381611
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  33381545 aggggtcttataaaaagggacaaaaaaaatc-tcaaaagggtcttataattagggacggaggtagtat 33381611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 45907311 - 45907244
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||         |||||||||| |||||||||||||||||||||||||    
T  45907311 aggggtcttataaaaagggacaattttttttttcaaaagggtattataattagggacggagggagtat 45907244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 48521063 - 48521029
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  48521063 tcaaaagggtcttataattagggacggagggagta 48521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7449335 - 7449270
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||    
T  7449335 aggggtcttataaaaagggacaaaaaaattc-tcaaaatggtcttataattagggacggagggagta 7449270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25247662 - 25247727
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||    
T  25247662 aggggtcttataaaaagggacaaaaaaattc-tcaaaagagtcttataattagggacggagggagta 25247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 38428411 - 38428444
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  38428411 caaaagggtcttataattagggacggagggagta 38428444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 44547487 - 44547425
Alignment:
Q  6 tcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  44547487 tcttataaaaagggacaaaaaaaattctcaaaaaggtcttataattagggacggagggagtat 44547425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 2289989 - 2290054
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||| |||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  2289989 gggtcttagaaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 2290054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 41003130 - 41003191
Alignment:
Q  6 tcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||        |||||||||||||||||||| ||||||||||||||    
T  41003130 tcttataaaaagggacaaaaaaaattctcaaaagggtcttataattaaggacggagggagta 41003191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 9140508 - 9140564
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggag 61  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  9140508 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggag 9140564  T

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Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 27813530 - 27813495
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  27813530 tcaaaagggtcttataattagggacggaggtagtat 27813495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 34012520 - 34012555
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  34012520 tcaaaagggtcttataattagggacggaggtagtat 34012555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 1574751 - 1574717
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtatc 69  Q
    |||||||||||||||||||||||||||| ||||||    
T  1574751 aaaagggtcttataattagggacggaggtagtatc 1574717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 18113169 - 18113203
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||| |||||||||||||    
T  18113169 tcaaaagggtcttataattagagacggagggagta 18113203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 29177025 - 29176991
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||| ||||||||||||||    
T  29177025 caaaagggtcttataattagagacggagggagtat 29176991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 31581711 - 31581677
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  31581711 tcaaaagggtcttataattagggacggaggtagta 31581677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 32118166 - 32118200
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  32118166 tcaaaagggtcttataattagggacggaggtagta 32118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 36711301 - 36711335
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||| ||||||||||||    
T  36711301 tcaaaagggtcttataattaggaacggagggagta 36711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 31769335 - 31769364
Alignment:
Q  33 tcaaaagggtcttataattagggacggagg 62  Q
    ||||||||||||||||||||||||||||||    
T  31769335 tcaaaagggtcttataattagggacggagg 31769364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 42541864 - 42541897
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||| |||||    
T  42541864 aaaagggtcttataattagggacggaggtagtat 42541897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22527758 - 22527691
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  22527758 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 22527691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34662270 - 34662203
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  34662270 aggggtcttataaaaagggacaaaaaaaactctcaaaagggtcttataattagggacggagggagtat 34662203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40004380 - 40004447
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  40004380 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 40004447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1266015 - 1265949
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  1266015 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 1265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9828459 - 9828393
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  9828459 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 6673202 - 6673266
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  6673202 ggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 6673266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 16127322 - 16127258
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  16127322 ggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 16127258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15190786 - 15190853
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||    
T  15190786 aggggtcttataaaaagggacaaaaaaaattctcaaaagagtcttataattagggacggagggagtat 15190853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3497771 - 3497837
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||    
T  3497771 aggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattaggaacggagggagta 3497837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7951627 - 7951562
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  7951627 aggggtcttataaaaagggacaaaaaaaatc-tcaaaagggtcttataattagggacggagggagta 7951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23286445 - 23286511
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  23286445 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 23286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 16153228 - 16153293
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||| |||||||    
T  16153228 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggatggagtat 16153293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 26894846 - 26894911
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||    
T  26894846 gggtcttataaaaagggataaaaaaaattctcaaaagggtcttataattagggacggagggagtat 26894911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28041322 - 28041395
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatctttgt 74  Q
    ||||||||||||||||||||||||        ||||| |||||||||||||||||| ||||||||||| |||||    
T  28041322 aggggtcttataaaaagggacaaaaaaaattctcaaaggggtcttataattagggatggagggagtatttttgt 28041395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7940518 - 7940442
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatctttgttct 77  Q
    |||||||||||||||||||||||         |||||||||||||||||||||||||||||| ||||| ||| ||||    
T  7940518 aggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtatattttttct 7940442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 9020728 - 9020693
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  9020728 tcaaaagggtcttataattagggacggagggagtat 9020693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 14913682 - 14913647
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  14913682 tcaaaagggtcttataattagggacggagggagtat 14913647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32478204 - 32478144
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggag 61  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  32478204 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggag 32478144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 43060384 - 43060448
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  43060384 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 43060448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 186362 - 186396
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  186362 caaaagggtcttataattagggacggagggagtat 186396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 3028075 - 3028012
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  3028075 gtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggaggtagtat 3028012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 10734526 - 10734560
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  10734526 tcaaaagggtcttataattagggacggagggagta 10734560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16440997 - 16440930
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||| |||||||||        | ||||||||||||||||||||||||||||||||||    
T  16440997 aggggtcttataaagagggacaaaaaaaattcttaaaagggtcttataattagggacggagggagtat 16440930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25601031 - 25601098
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||| |||||        |||||||||||||||||||||| |||||||||||||    
T  25601031 aggggtcttataaaaaggaacaaaaaaaattctcaaaagggtcttataattaggaacggagggagtat 25601098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 9828657 - 9828690
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  9828657 caaaagggtcttataattagggacggagggagta 9828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 27873318 - 27873376
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggag 61  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  27873318 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggag 27873376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 20142263 - 20142299
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtatct 70  Q
    ||||||||||||||||||||||||||||| |||||||    
T  20142263 caaaagggtcttataattagggacggaggtagtatct 20142299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 32147357 - 32147293
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  32147357 gggtcttataaaaagggacaaaaaaattc-tcaaaaaggtcttataattagggacggagggagtat 32147293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 8949846 - 8949811
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  8949846 tcaaaagggtcttataattagggacggaggtagtat 8949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 14435864 - 14435829
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  14435864 tcaaaagggtcttataattagggacggaggtagtat 14435829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 15521945 - 15521980
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||| |||||||||||||||||||||||||    
T  15521945 tcaaaagggttttataattagggacggagggagtat 15521980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 23260141 - 23260176
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  23260141 tcaaaagggtcttataattagggacggaggtagtat 23260176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 26889627 - 26889592
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26889627 tcaaaagggtcctataattagggacggagggagtat 26889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40643160 - 40643092
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatc 69  Q
    |||||||||||||||| |||||||        |||||||| ||||||||||||||||||||| ||||||    
T  40643160 aggggtcttataaaaaaggacaaaaaaaattctcaaaaggatcttataattagggacggaggtagtatc 40643092  T

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Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 41384175 - 41384210
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||| |||||||||||||||||||||||||||    
T  41384175 tcaaaaggatcttataattagggacggagggagtat 41384210  T

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Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 3497573 - 3497539
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||| |||||||    
T  3497573 caaaagggtcttataattagggacggatggagtat 3497539  T

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Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 4753193 - 4753252
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggaggga 64  Q
    ||||||||||||||||||||        | ||||||||||||||||||||||||||||||    
T  4753193 gtcttataaaaagggacaaaaaaaattcttaaaagggtcttataattagggacggaggga 4753252  T

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Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 4976293 - 4976327
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  4976293 tcaaaagggtcttataattagggacggaggtagta 4976327  T

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Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 13862998 - 13863032
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||| |||||||||||||||||||||||    
T  13862998 tcaaaagggtcatataattagggacggagggagta 13863032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 16127523 - 16127557
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||| |||||||    
T  16127523 caaaagggtcttataattagggacggatggagtat 16127557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 19571942 - 19571976
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  19571942 tcaaaagggtcttataattagggacggaggtagta 19571976  T

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Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 32147555 - 32147589
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||| ||||||||||||||    
T  32147555 caaaagggtcttataattagagacggagggagtat 32147589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 41383945 - 41383911
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||| |||||||||||||||||||||||||||    
T  41383945 caaaaggatcttataattagggacggagggagtat 41383911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 13661124 - 13661157
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    |||| |||||||||||||||||||||||||||||    
T  13661124 aaaaaggtcttataattagggacggagggagtat 13661157  T

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Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4035891 - 4035824
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  4035891 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 4035824  T

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Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5375528 - 5375594
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  5375528 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 5375594  T

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Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5743630 - 5743696
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  5743630 aggggtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggagggagta 5743696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26625973 - 26626039
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  26625973 aggggtcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattagggacggagggagta 26626039  T

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Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34273190 - 34273256
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  34273190 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 34273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 47806926 - 47806860
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  47806926 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 45742779 - 45742844
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  45742779 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 45742844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4416031 - 4415964
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  4416031 aggggtcttataaaaagggacaaaaaacattctcaaaagggtcttataattagggacggaggtagtat 4415964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36391920 - 36391853
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||    
T  36391920 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattaaggacggagggagtat 36391853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48030379 - 48030312
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||| |||||||||||    
T  48030379 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggatggagggagtat 48030312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 49228689 - 49228756
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||    
T  49228689 aggggtcttataaaaagggacaaattttttcttcaaaagggtcttataattagagacggagggagtat 49228756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1859210 - 1859144
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||    
T  1859210 aggggtcttataaaaagggacaaaaaaaattctcaaaaaggtcttataattagggacggagggagta 1859144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9328211 - 9328277
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  9328211 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 9328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 28501359 - 28501425
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatc 69  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||    
T  28501359 gggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggaggtagtatc 28501425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29520135 - 29520201
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  29520135 aggggtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggaggtagta 29520201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 35675895 - 35675957
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  35675895 gtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggagggagta 35675957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43387964 - 43388030
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  43387964 aggggtcttataaaaagggacaaaagaaattctcaaaagggtcttataattagggacggaggaagta 43388030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44294855 - 44294789
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||    
T  44294855 aggggtcttataaaaaaggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 52978044 - 52977982
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  52978044 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 52977982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 2615919 - 2615983
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||        ||||||||||||||| ||||||||||||||||||||    
T  2615919 ggtcttataaaaagggacaaaaaaatttctcaaaagggtcttatgattagggacggagggagtat 2615983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 20391411 - 20391474
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  20391411 gggtcttataaaaagggacaaattttttt-tcaaaagggtcttataattagggacggagggagta 20391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 24754141 - 24754077
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||    
T  24754141 ggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagtat 24754077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 54676613 - 54676549
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggag 65  Q
    ||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||    
T  54676613 aggggtcttataaaaagggacaaaaaaaattctcaaaaaggtcttataattagggacggagggag 54676549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1028584 - 1028517
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||         |||||||||||||||||||||| |||||||||||||    
T  1028584 aggggtcttataaaaagggacaattttttttttcaaaagggtcttataattaggaacggagggagtat 1028517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 6753588 - 6753525
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||    
T  6753588 ggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagta 6753525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 6807491 - 6807428
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||| ||||||||||    
T  6807491 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacagagggagtat 6807428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18872783 - 18872716
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||| |||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  18872783 agggatcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagtat 18872716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20455153 - 20455219
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  20455153 aggggtcttataaaaagggacaaaaaaattc-tcaaaagggtcttataattagggacggaggtagtat 20455219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 20747434 - 20747468
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  20747434 caaaagggtcttataattagggacggagggagtat 20747468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 30771562 - 30771528
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  30771562 tcaaaagggtcttataattagggacggagggagta 30771528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 31937139 - 31937076
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  31937139 ggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 31937076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 32032996 - 32033030
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  32032996 tcaaaagggtcttataattagggacggagggagta 32033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 33413552 - 33413518
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  33413552 tcaaaagggtcttataattagggacggagggagta 33413518  T

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Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45097136 - 45097203
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||| |||||||||||||||||||        |||||||||||||||||||||||||||| |||||||    
T  45097136 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggatggagtat 45097203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 46950058 - 46949991
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||| |||||        |||||||||||||||||||||||||||||| |||||    
T  46950058 aggggtcttataaaaaggaacaaaaaatattctcaaaagggtcttataattagggacggaggtagtat 46949991  T

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Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 52870710 - 52870643
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||| |||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||    
T  52870710 agggatcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagagacggagggagtat 52870643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 4036089 - 4036122
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  4036089 caaaagggtcttataattagggacggagggagta 4036122  T

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Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 4549662 - 4549629
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  4549662 caaaagggtcttataattagggacggagggagta 4549629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25708650 - 25708715
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||    
T  25708650 aggggtcttataaaaagggacaaaaaaattc-tcaaaaaggtcttataattagggacggagggagta 25708715  T

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Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 29014097 - 29014064
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  29014097 caaaagggtcttataattagggacggagggagta 29014064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 49373664 - 49373730
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||| ||||        |||||||||||||||||||||||||||||| ||||    
T  49373664 aggggtcttataaaaagggccaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 49373730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 53277157 - 53277222
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        | |||||||||||||||||||||||||||||||||    
T  53277157 aggggtcttataaaaagggacaaaaaaattctt-aaaagggtcttataattagggacggagggagta 53277222  T

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Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 55632032 - 55631999
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  55632032 caaaagggtcttataattagggacggagggagta 55631999  T

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Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 17610023 - 17610058
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||| |||||||||||||||||||||||||||    
T  17610023 tcaaaaggatcttataattagggacggagggagtat 17610058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 67
Target Start/End: Complemental strand, 25708451 - 25708420
Alignment:
Q  36 aaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||    
T  25708451 aaagggtcttataattagggacggagggagta 25708420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 32899221 - 32899256
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  32899221 tcaaaagggtcttataattagggacggaggtagtat 32899256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 49793125 - 49793090
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  49793125 tcaaaagggtcttataattagggacggaggtagtat 49793090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 56432552 - 56432517
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  56432552 tcaaaagggtcttataattagggacggaggtagtat 56432517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 7698472 - 7698506
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  7698472 tcaaaagggtcttataattagggacggaggtagta 7698506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 15241514 - 15241480
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||| |||||||||||||||||||||||||||    
T  15241514 tcaaaagagtcttataattagggacggagggagta 15241480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 25124249 - 25124283
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  25124249 tcaaaagggtcttataattagggacggaggtagta 25124283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 26625777 - 26625743
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||| |||||||||||||||||||||||    
T  26625777 tcaaaagggtcctataattagggacggagggagta 26625743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 39144668 - 39144706
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtatcttt 72  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  39144668 caaaaaggtcttataattagagacggagggagtatcttt 39144706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 39670989 - 39671023
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  39670989 tcaaaagggtcttataattagggacggaggtagta 39671023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 47228731 - 47228765
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  47228731 tcaaaagggtcttataattagggacggaggaagta 47228765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 53564359 - 53564393
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  53564359 tcaaaagggtcttataattagggacggaggtagta 53564393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 53629826 - 53629792
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||| ||||||||||    
T  53629826 tcaaaagggtcttataattagggatggagggagta 53629792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 55563130 - 55563164
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  55563130 tcaaaagggtcttataattagggacggaggtagta 55563164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 2615716 - 2615683
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    |||||||| |||||||||||||||||||||||||    
T  2615716 caaaagggccttataattagggacggagggagta 2615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 5743432 - 5743399
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||| ||||||||||||||||||||||||||||    
T  5743432 caaaatggtcttataattagggacggagggagta 5743399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 21265252 - 21265219
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||| |||||    
T  21265252 aaaagggtcttataattagggacggaggtagtat 21265219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 30523796 - 30523763
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||| |||||    
T  30523796 aaaagggtcttataattagggacggaggtagtat 30523763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 41620548 - 41620519
Alignment:
Q  33 tcaaaagggtcttataattagggacggagg 62  Q
    ||||||||||||||||||||||||||||||    
T  41620548 tcaaaagggtcttataattagggacggagg 41620519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 29508629 - 29508597
Alignment:
Q  36 aaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||| |||||    
T  29508629 aaagggtcttataattagggacggaggtagtat 29508597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 39144436 - 39144404
Alignment:
Q  35 aaaagggtcttataattagggacggagggagta 67  Q
    |||||| ||||||||||||||||||||||||||    
T  39144436 aaaaggatcttataattagggacggagggagta 39144404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 53630056 - 53630088
Alignment:
Q  34 caaaagggtcttataattagggacggagggagt 66  Q
    ||||||||||||||| |||||||||||||||||    
T  53630056 caaaagggtcttatatttagggacggagggagt 53630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34883819 - 34883886
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  34883819 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 34883886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40607768 - 40607701
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  40607768 aggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagtat 40607701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2438291 - 2438225
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  2438291 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 2438225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27560272 - 27560206
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  27560272 aggggtcttataaaaagggacaaaaatttttctcaaaagggtcttataattagggacggagggagta 27560206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 8716865 - 8716934
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatcttt 72  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||||    
T  8716865 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaacttt 8716934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16805762 - 16805830
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatc 69  Q
    ||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||    
T  16805762 aggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagtatc 16805830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5664704 - 5664637
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  5664704 aggggtcttataaaaagggacaaaaaaaattctcaaaaaggtcttataattagggacggagggagtat 5664637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8841628 - 8841695
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||    
T  8841628 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattaaggacggagggagtat 8841695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8912845 - 8912916
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatcttt 72  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||| ||||    
T  8912845 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtaacttt 8912916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12890179 - 12890246
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  12890179 aggggtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggaggtagtat 12890246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15228120 - 15228187
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||    
T  15228120 aggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagtat 15228187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20252276 - 20252209
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||||    
T  20252276 aggggtcttataaaaagtgacaaaagaaattctcaaaagggtcttataattagggacggagggagtat 20252209  T

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Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34062636 - 34062703
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  34062636 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 34062703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34113597 - 34113530
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||| |||||||    
T  34113597 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggatggagtat 34113530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 36131002 - 36131065
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  36131002 ggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40680793 - 40680726
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||| |||||||    
T  40680793 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggatggagtat 40680726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41450582 - 41450515
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  41450582 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 41450515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 7491906 - 7491844
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  7491906 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 7491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17408265 - 17408331
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  17408265 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 17408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23789035 - 23788969
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||| ||||||||||||||    
T  23789035 aggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattaaggacggagggagta 23788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32121010 - 32120944
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||    
T  32121010 aggggtcttataaaaagggacaaatttttttttcaaaaggatcttataattagggacggagggagta 32120944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 11201717 - 11201682
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  11201717 tcaaaagggtcttataattagggacggagggagtat 11201682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16845044 - 16845111
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatc 69  Q
    ||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||    
T  16845044 aggggtcttataaaaagggacaaaaaaattc-tcaaaaggatcttataattagggacggagggagtatc 16845111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 3095362 - 3095299
Alignment:
Q  4 ggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  3095362 ggtcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagta 3095299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 16108248 - 16108214
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  16108248 caaaagggtcttataattagggacggagggagtat 16108214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22897457 - 22897390
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||| |||||||||||||||||        |||||||| |||||||||||||||||||||||||||    
T  22897457 aggggttttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagtat 22897390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25624798 - 25624732
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  25624798 aggggtcttataaaaagggacaaaaaaattc-tcaaaaaggtcttataattagggacggagggagtat 25624732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 26322268 - 26322331
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  26322268 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 26322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31751135 - 31751068
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||||||| |||||    
T  31751135 aggggtcttataaaaagggacaaaaaaatttcacaaaagggtcttataattagggacggaggtagtat 31751068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 34113789 - 34113823
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  34113789 tcaaaagggtcttataattagggacggagggagta 34113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 39833772 - 39833738
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  39833772 caaaagggtcttataattagggacggagggagtat 39833738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 2438489 - 2438522
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  2438489 caaaagggtcttataattagggacggagggagta 2438522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 7492108 - 7492141
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  7492108 caaaagggtcttataattagggacggagggagta 7492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 9701134 - 9701068
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatc 69  Q
    ||||||||||||||||||||||        |||||||||||||||||||| ||||||||| ||||||    
T  9701134 gggtcttataaaaagggacaaattattttttcaaaagggtcttataattaaggacggaggtagtatc 9701068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 22182929 - 22182962
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||    
T  22182929 aaaagggtcttataattagggacggagggagtat 22182962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 22897655 - 22897688
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  22897655 caaaagggtcttataattagggacggagggagta 22897688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 45474384 - 45474351
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  45474384 caaaagggtcttataattagggacggagggagta 45474351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 42629405 - 42629373
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggag 65  Q
    |||||||||||||||||||||||||||||||||    
T  42629405 tcaaaagggtcttataattagggacggagggag 42629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 4711762 - 4711727
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||| ||||||||||||||||||||||    
T  4711762 tcaaaagggtcttttaattagggacggagggagtat 4711727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 15227924 - 15227889
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15227924 tcaaaagggtcctataattagggacggagggagtat 15227889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 41422546 - 41422511
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  41422546 tcaaaagggtcttataattagggacggaggtagtat 41422511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 41494625 - 41494660
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  41494625 tcaaaagggtcttataattagggacggaggtagtat 41494660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 1360055 - 1360089
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||| ||||||||||||||||||||||||||||    
T  1360055 caaaagagtcttataattagggacggagggagtat 1360089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 2060350 - 2060316
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  2060350 tcaaaagggtcttataattagggacggaggtagta 2060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 2200243 - 2200277
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  2200243 tcaaaagggtcttataattagggacggaggtagta 2200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 7116302 - 7116336
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  7116302 tcaaaagggtcttataattagggacggaggtagta 7116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 10757807 - 10757773
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||| ||||||||    
T  10757807 caaaagggtcttataattagggacggggggagtat 10757773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 15404480 - 15404442
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtatcttt 72  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  15404480 caaaagggtcttatatatagggacggagggagtatcttt 15404442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 18374707 - 18374741
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  18374707 tcaaaagggtcttataattagggacggaggtagta 18374741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 24345681 - 24345715
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  24345681 tcaaaagggtcttataattagggacggaggtagta 24345715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 28566185 - 28566151
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  28566185 tcaaaagggtcttataattagggacggaggtagta 28566151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29239564 - 29239615
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataatta 52  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||    
T  29239564 aggggtcttataaaaagggacaaaaaaaattgtcaaaagggtcttataatta 29239615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 2200010 - 2199977
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||| |||||    
T  2200010 aaaagggtcttataattagggacggaggtagtat 2199977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 8841429 - 8841396
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    ||||| ||||||||||||||||||||||||||||    
T  8841429 aaaagagtcttataattagggacggagggagtat 8841396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 11201947 - 11201980
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||| |||||||||    
T  11201947 caaaagggtcttataattagggacagagggagta 11201980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 16456644 - 16456615
Alignment:
Q  35 aaaagggtcttataattagggacggaggga 64  Q
    ||||||||||||||||||||||||||||||    
T  16456644 aaaagggtcttataattagggacggaggga 16456615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 17408067 - 17408034
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||| ||||||    
T  17408067 caaaagggtcttataattagggacggatggagta 17408034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 23083547 - 23083514
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||| |||||    
T  23083547 aaaagggtcttataattagggacggaggtagtat 23083514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 29239366 - 29239333
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    |||||| |||||||||||||||||||||||||||    
T  29239366 caaaagagtcttataattagggacggagggagta 29239333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 13215825 - 13215857
Alignment:
Q  35 aaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||| ||||    
T  13215825 aaaagggtcttataattagggacggaggtagta 13215857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 29830757 - 29830793
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtatc 69  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  29830757 tcaaaaaggtcttataattagggacggaggtagtatc 29830793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9038708 - 9038642
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  9038708 aggggtcttataaaaagggacaaatgattttttcaaaagggtcttataattagggacggagggagta 9038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34301803 - 34301869
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  34301803 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 30248711 - 30248646
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  30248711 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 30248646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 402592 - 402659
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  402592 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 402659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9388762 - 9388829
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  9388762 aggggtcttataaaaagggacaaaaaaaattctcaaaaaggtcttataattagggacggagggagtat 9388829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13321297 - 13321364
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  13321297 aggggtcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagtat 13321364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25045614 - 25045681
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  25045614 aggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 25045681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8743253 - 8743188
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  8743253 aggggtcttataaaaagggacaaaaaaattc-tcaaaagggtcttataattagggacggagggagta 8743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23398110 - 23398176
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||    
T  23398110 aggggtcttataaaaagggataaaaaaaatcctcaaaagggtcttataattagggacggagggagta 23398176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 4844434 - 4844399
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  4844434 tcaaaagggtcttataattagggacggagggagtat 4844399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 231108 - 231142
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  231108 tcaaaagggtcttataattagggacggagggagta 231142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5457478 - 5457411
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||| |||||        |||||| |||||||||||||||||||||||||||||    
T  5457478 aggggtcttataaaaaggaacaaaaaaaattctcaaaaaggtcttataattagggacggagggagtat 5457411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11847637 - 11847566
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtatcttt 72  Q
    ||||||||||||||||||||||||        | |||||| ||||||||||||||||||||| |||||||||    
T  11847637 aggggtcttataaaaagggacaaaaaaaattcttaaaaggatcttataattagggacggaggaagtatcttt 11847566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 11847835 - 11847869
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||||||||    
T  11847835 tcaaaagggtcttataattagggacggagggagta 11847869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19097772 - 19097839
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||| |||||||        ||||||||||||||||||||| ||||||||||||||    
T  19097772 aggggtcttataaaaaaggacaaaaaaaattctcaaaagggtcttataattagagacggagggagtat 19097839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 34741730 - 34741764
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  34741730 caaaagggtcttataattagggacggagggagtat 34741764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34915514 - 34915581
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||| ||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  34915514 aggggacttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 34915581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 287385 - 287451
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||| |||||||||||||||||||        |||||| ||||||||||||||||||||||||||||    
T  287385 agggatcttataaaaagggacaaaaaaaattctcaaaaaggtcttataattagggacggagggagta 287451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 925904 - 925970
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||| |||||||||||||||||||        |||||||||||||||||||||| ||||||||||||    
T  925904 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattaggaacggagggagta 925970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 9388562 - 9388529
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  9388562 caaaagggtcttataattagggacggagggagta 9388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 12144043 - 12144076
Alignment:
Q  35 aaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||    
T  12144043 aaaagggtcttataattagggacggagggagtat 12144076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 13648104 - 13648166
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||        |||||||||||||||||||| ||||||||||||||    
T  13648104 gtcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattaaggacggagggagta 13648166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 15498690 - 15498628
Alignment:
Q  6 tcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  15498690 tcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 15498628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 13901675 - 13901639
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtatc 69  Q
    |||||||||||||||||||||||||||||| ||||||    
T  13901675 tcaaaagggtcttataattagggacggaggtagtatc 13901639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 25197216 - 25197151
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||| |||        |||||||| |||||||||||||||||||||||||||    
T  25197216 gggtcttataaaaagggataaaaaaatttctcaaaaggatcttataattagggacggagggagtat 25197151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 1147240 - 1147304
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||        | |||||||||||||||||||||||||| ||||||    
T  1147240 gggtcttataaaaagggacaaaaaaaattcttaaaagggtcttataattagggacggatggagta 1147304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 1730075 - 1730138
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||    
T  1730075 gggtcttataaaaagggacaaaaaaaatt-tcaaaaggatcttataattagggacggagggagta 1730138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 13647902 - 13647867
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||| |||||||||||||||||    
T  13647902 tcaaaagggtcttataataagggacggagggagtat 13647867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 16122517 - 16122552
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  16122517 tcaaaagggtcttataattagggacggaggtagtat 16122552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 16272971 - 16273006
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  16272971 tcaaaagggtcttataattagggacggaggaagtat 16273006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 23604494 - 23604459
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  23604494 tcaaaagggtcttataattagggacggaggtagtat 23604459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 31091509 - 31091445
Alignment:
Q  3 gggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||| ||||    
T  31091509 gggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagta 31091445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 2090692 - 2090658
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  2090692 tcaaaagggtcttataattagggacggaggtagta 2090658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 10195996 - 10196030
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||| |||||||||||||    
T  10195996 tcaaaagggtcttataattagagacggagggagta 10196030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12143845 - 12143778
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||| |||||||||||||||||        | ||||| ||||||||||||||||||||||||||||    
T  12143845 aggggttttataaaaagggacaaaaaaaactcttaaaagtgtcttataattagggacggagggagtat 12143778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 23397912 - 23397878
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||| |||||||||||||||||||||||||||||    
T  23397912 caaaatggtcttataattagggacggagggagtat 23397878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 33487867 - 33487833
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||| ||||||||||||||||||||||||||||    
T  33487867 tcaaaaaggtcttataattagggacggagggagta 33487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 1729876 - 1729839
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtatct 70  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  1729876 tcaaaagggccctataattagggacggagggagtatct 1729839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 1779817 - 1779784
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||| ||||||||||||||||||||||||||    
T  1779817 caaaaggatcttataattagggacggagggagta 1779784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 6418135 - 6418168
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||| ||||||||||||||||||||||||||||    
T  6418135 caaaaaggtcttataattagggacggagggagta 6418168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 13866626 - 13866593
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||| ||||    
T  13866626 caaaagggtcttataattagggacggaggtagta 13866593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 17227530 - 17227559
Alignment:
Q  33 tcaaaagggtcttataattagggacggagg 62  Q
    ||||||||||||||||||||||||||||||    
T  17227530 tcaaaagggtcttataattagggacggagg 17227559  T

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Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 8637278 - 8637306
Alignment:
Q  33 tcaaaagggtcttataattagggacggag 61  Q
    |||||||||||||||||||||||||||||    
T  8637278 tcaaaagggtcttataattagggacggag 8637306  T

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Target: scaffold0122 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12130 - 12064
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  12130 aggggtcttataaaaagggacaaaaaaattc-tcaaaagggtcttataattagggacggagggagtat 12064  T

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Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 12328 - 12362
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||| |||||||||||||||||||||||||    
T  12328 caaaagggttttataattagggacggagggagtat 12362  T

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Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 51653 - 51720
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  51653 agggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 51720  T

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Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 47702 - 47639
Alignment:
Q  5 gtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  47702 gtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 47639  T

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Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 47904 - 47937
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||| ||||||||||||||||||||||||||    
T  47904 caaaaggatcttataattagggacggagggagta 47937  T

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Target: scaffold0604 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3754 - 3819
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  3754 aggggtcttataaaaagggacaaaaaaattc-tcaaaagggtcttataattagggacggagggagta 3819  T

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Target: scaffold0604; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 3559 - 3525
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||| |||||||||||||||||||||||    
T  3559 tcaaaagggtcctataattagggacggagggagta 3525  T

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Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 259098 - 259160
Alignment:
Q  6 tcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  259098 tcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 259160  T

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Target: scaffold0368 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 8283 - 8218
Alignment:
Q  2 ggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||    
T  8283 ggggtcttataaaaagggacaaatttttttttcaaaagggtcttacaattagggacggagggagta 8218  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 355334 - 355369
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  355334 tcaaaagggtcttataattagggacggagggagtat 355369  T

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Target: scaffold0308 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14319 - 14385
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||| |        |||||||||||||||||||| ||||||||||||||    
T  14319 aggggtcttataaaaagggacagaaaaaattctcaaaagggtcttataattaaggacggagggagta 14385  T

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Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3503 - 3438
Alignment:
Q  1 aggggtcttataaaaagggacaaannnnnnngtcaaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  3503 aggggtcttataaaaagggacaaaaaaattc-tcaaaagggtcttataattagggacggaggtagta 3438  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 65411 - 65378
Alignment:
Q  34 caaaagggtcttataattagggacggagggagta 67  Q
    ||||||||||||||||||||||||||||||||||    
T  65411 caaaagggtcttataattagggacggagggagta 65378  T

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Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 65640 - 65675
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||| |||||||||||||||||||||||||||||    
T  65640 tcaaaaaggtcttataattagggacggagggagtat 65675  T

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Target: scaffold0163 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 1449 - 1484
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  1449 tcaaaagggtcttataattagggacggaggtagtat 1484  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 164248 - 164213
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtat 68  Q
    |||||||||||||||||||||||||||||| |||||    
T  164248 tcaaaagggtcttataattagggacggaggtagtat 164213  T

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Target: scaffold0674 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 5185 - 5151
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  5185 tcaaaagggtcttataattagggacggaggtagta 5151  T

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Target: scaffold0549 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 10185 - 10219
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  10185 tcaaaagggtcttataattagggacggaggtagta 10219  T

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Target: scaffold0339 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 7143 - 7177
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  7143 tcaaaagggtcttataattagggacggaggaagta 7177  T

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Target: scaffold0240 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 18531 - 18497
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  18531 tcaaaagggtcttataattagggacggaggtagta 18497  T

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Target: scaffold0240; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 18759 - 18793
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  18759 tcaaaagggtcttataattagggacggaggtagta 18793  T

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Target: scaffold0237 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 6613 - 6647
Alignment:
Q  34 caaaagggtcttataattagggacggagggagtat 68  Q
    ||||||||||||||||||||||||||||| |||||    
T  6613 caaaagggtcttataattagggacggaggtagtat 6647  T

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Target: scaffold0237; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 6385 - 6349
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagtatc 69  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  6385 tcaaaagggtcctataattagggacggaggtagtatc 6349  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 48688 - 48654
Alignment:
Q  33 tcaaaagggtcttataattagggacggagggagta 67  Q
    |||||||||||||||||||||||||||||| ||||    
T  48688 tcaaaagggtcttataattagggacggaggtagta 48654  T

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Target: scaffold1283 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 27 - 59
Alignment:
Q  34 caaaagggtcttataattagggacggagggagt 66  Q
    ||||||||||||||| |||||||||||||||||    
T  27 caaaagggtcttatatttagggacggagggagt 59  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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