View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12545_low_32 (Length: 272)
Name: NF12545_low_32
Description: NF12545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12545_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 36539838 - 36539579
Alignment:
| Q |
1 |
tgaaaccatcacaaatgtctctgttactcaaaagctgccgtatttaccaagtaagtaaacaatatttttataattgccatgctatgctttaaggttgtta |
100 |
Q |
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| T |
36539838 |
tgaaaccatcacaaatgtctctgttactcaaaagctgccgtatttaccaagtaagtaaacaatatttttataattgccatgctatgctttaaggttgtta |
36539739 |
T |
|
| Q |
101 |
gtattttgtcttgtatatatgcaatgctttgttacttagatttgcggtaataagtgattaaaactaaattatgttggggctcaggagcaaaagattacaa |
200 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36539738 |
gtatgttgtcttgtatatatgcaatgctttgttacttagatttgcggtaataagtgattaaaactaaattatgttggggctcaggagcaaaagattacaa |
36539639 |
T |
|
| Q |
201 |
gagaaacatgggtaaatcaagtgaggaagattgttggggacatgttgctgcattcagtga |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36539638 |
gagaaacatgggtaaatcaagtgaggaagattgttggggacatgttgctgcattcagtga |
36539579 |
T |
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