View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12545_low_37 (Length: 256)
Name: NF12545_low_37
Description: NF12545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12545_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 37816526 - 37816771
Alignment:
| Q |
1 |
cagttataaacatgattctattatgtaactaaaattattcatgtttcaaaagtgattttctctgatccaaaagacattgaagattattgaaagaagacta |
100 |
Q |
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| T |
37816526 |
cagttataaacatgattctattatgtaactaaaattattcatgtttcaaaagtgattttctctgatccaaaagacattgaagattattgaaagaagacta |
37816625 |
T |
|
| Q |
101 |
attagatcatctaaactaaacttagtttttacatacaccaaacacactaatcctttattaagagagacatataatcacactttaccatcaaaacatacat |
200 |
Q |
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| T |
37816626 |
attagatcatctaaactaaacttagtttttacatacaccaaacacactaatcctttattaagagagacatataatcacactttaccatcaaaacatacat |
37816725 |
T |
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| Q |
201 |
tgtggtggtaattgtgttgagactaccacaatttaacatccttctt |
246 |
Q |
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| T |
37816726 |
tgtggtggtaattgtgttgagactaccacaatttaacatccttctt |
37816771 |
T |
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