View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12547_low_4 (Length: 318)

Name: NF12547_low_4
Description: NF12547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12547_low_4
NF12547_low_4
[»] chr2 (51 HSPs)
chr2 (19-234)||(28740277-28740491)
chr2 (19-234)||(3463673-3463888)
chr2 (19-234)||(18177269-18177493)
chr2 (19-234)||(28844557-28844781)
chr2 (19-189)||(7026606-7026775)
chr2 (19-234)||(33135625-33135848)
chr2 (19-230)||(13833420-13833630)
chr2 (19-234)||(26788786-26789009)
chr2 (19-234)||(25288161-25288385)
chr2 (20-234)||(6224551-6224755)
chr2 (19-231)||(10657408-10657629)
chr2 (96-230)||(379016-379149)
chr2 (19-233)||(10125285-10125500)
chr2 (19-230)||(3574849-3575049)
chr2 (19-234)||(215222-215433)
chr2 (19-221)||(12407382-12407593)
chr2 (19-221)||(16269693-16269904)
chr2 (19-221)||(24776357-24776568)
chr2 (19-221)||(20605238-20605449)
chr2 (19-221)||(31170621-31170832)
chr2 (107-234)||(43078653-43078789)
chr2 (19-221)||(5093044-5093255)
chr2 (19-221)||(14198574-14198785)
chr2 (19-221)||(22551760-22551971)
chr2 (19-221)||(35317064-35317275)
chr2 (19-221)||(43847648-43847859)
chr2 (19-219)||(305464-305673)
chr2 (19-162)||(44765777-44765919)
chr2 (19-162)||(1789444-1789586)
chr2 (172-234)||(7027051-7027113)
chr2 (19-162)||(9120128-9120270)
chr2 (95-209)||(32125331-32125454)
chr2 (20-175)||(26601253-26601407)
chr2 (90-147)||(21370631-21370687)
chr2 (19-69)||(20605154-20605204)
chr2 (38-74)||(24193595-24193631)
chr2 (19-71)||(24776315-24776367)
chr2 (19-69)||(7026564-7026614)
chr2 (19-69)||(10125492-10125542)
chr2 (19-69)||(26788744-26788794)
chr2 (19-69)||(32125252-32125302)
chr2 (19-71)||(5093245-5093297)
chr2 (38-74)||(11534881-11534917)
chr2 (19-71)||(12407340-12407392)
chr2 (19-71)||(16269651-16269703)
chr2 (19-71)||(20605112-20605164)
chr2 (19-71)||(20605196-20605248)
chr2 (38-74)||(29940991-29941027)
chr2 (19-71)||(31170822-31170874)
chr2 (38-74)||(34028935-34028971)
chr2 (38-74)||(45546977-45547013)
[»] chr5 (32 HSPs)
chr5 (19-234)||(4240443-4240657)
chr5 (19-234)||(5949110-5949323)
chr5 (19-234)||(40013693-40013907)
chr5 (19-234)||(14000086-14000310)
chr5 (19-234)||(1461129-1461343)
chr5 (19-234)||(13925932-13926156)
chr5 (19-234)||(1152084-1152308)
chr5 (19-234)||(7947554-7947778)
chr5 (19-226)||(4550246-4550462)
chr5 (19-221)||(22746298-22746501)
chr5 (19-234)||(37013915-37014119)
chr5 (45-234)||(39852372-39852570)
chr5 (19-221)||(21147068-21147279)
chr5 (19-209)||(5272925-5273124)
chr5 (19-162)||(14465290-14465432)
chr5 (19-209)||(139274-139473)
chr5 (31-221)||(33656035-33656234)
chr5 (19-221)||(9220711-9220912)
chr5 (19-209)||(7016745-7016944)
chr5 (19-162)||(27459013-27459154)
chr5 (19-159)||(6460793-6460932)
chr5 (19-162)||(32157960-32158103)
chr5 (96-162)||(849225-849290)
chr5 (90-161)||(9689730-9689799)
chr5 (19-71)||(5273114-5273166)
chr5 (38-74)||(17518474-17518510)
chr5 (19-69)||(40013899-40013949)
chr5 (41-74)||(9689338-9689371)
chr5 (41-74)||(28594444-28594477)
chr5 (19-71)||(21147026-21147078)
chr5 (19-71)||(33656238-33656290)
chr5 (38-74)||(40410636-40410672)
[»] chr7 (82 HSPs)
chr7 (19-234)||(509651-509865)
chr7 (19-234)||(44121891-44122105)
chr7 (19-234)||(23101293-23101517)
chr7 (19-234)||(28342342-28342566)
chr7 (19-234)||(39784094-39784318)
chr7 (19-234)||(37327922-37328136)
chr7 (19-234)||(40460698-40460912)
chr7 (19-234)||(46405422-46405636)
chr7 (19-234)||(29614745-29614969)
chr7 (19-234)||(3022921-3023145)
chr7 (19-234)||(29585510-29585723)
chr7 (19-234)||(18838384-18838608)
chr7 (19-234)||(39028092-39028306)
chr7 (19-234)||(9882218-9882441)
chr7 (19-234)||(7993137-7993361)
chr7 (19-234)||(28034786-28035010)
chr7 (19-229)||(8675328-8675547)
chr7 (19-206)||(33892269-33892455)
chr7 (19-230)||(33382632-33382852)
chr7 (19-220)||(19251534-19251734)
chr7 (19-234)||(12740368-12740591)
chr7 (19-230)||(3797052-3797262)
chr7 (19-162)||(12963696-12963838)
chr7 (20-234)||(44256747-44256970)
chr7 (19-234)||(41827309-41827523)
chr7 (19-221)||(17001037-17001228)
chr7 (20-230)||(10068462-10068682)
chr7 (19-212)||(47066698-47066881)
chr7 (19-162)||(32883777-32883919)
chr7 (19-221)||(973186-973397)
chr7 (19-221)||(47914268-47914479)
chr7 (118-234)||(37972848-37972974)
chr7 (19-221)||(9179875-9180076)
chr7 (19-221)||(40996643-40996854)
chr7 (19-209)||(43581096-43581295)
chr7 (19-221)||(12893410-12893621)
chr7 (19-221)||(30440798-30441009)
chr7 (96-233)||(43187339-43187485)
chr7 (19-221)||(47879170-47879381)
chr7 (31-221)||(7719254-7719453)
chr7 (19-221)||(18914729-18914940)
chr7 (19-221)||(34695275-34695486)
chr7 (19-221)||(44343390-44343601)
chr7 (99-222)||(19810874-19810996)
chr7 (37-221)||(7718356-7718549)
chr7 (19-162)||(20275326-20275468)
chr7 (20-158)||(10676487-10676624)
chr7 (95-221)||(32142911-32143046)
chr7 (19-162)||(34009014-34009157)
chr7 (19-162)||(25805687-25805829)
chr7 (95-162)||(43679492-43679558)
chr7 (98-196)||(727594-727691)
chr7 (19-206)||(44623295-44623481)
chr7 (90-158)||(31638948-31639015)
chr7 (19-119)||(29893076-29893176)
chr7 (96-221)||(39219371-39219504)
chr7 (93-155)||(447852-447913)
chr7 (19-69)||(48117748-48117798)
chr7 (95-221)||(7113530-7113665)
chr7 (19-151)||(1470307-1470437)
chr7 (31-73)||(10616955-10616997)
chr7 (192-234)||(32883944-32883986)
chr7 (19-69)||(12963654-12963704)
chr7 (19-69)||(19251492-19251542)
chr7 (19-69)||(29614961-29615011)
chr7 (19-69)||(34695191-34695241)
chr7 (19-69)||(39784052-39784102)
chr7 (19-64)||(43187545-43187590)
chr7 (19-67)||(727514-727562)
chr7 (19-71)||(12893368-12893420)
chr7 (198-230)||(12963879-12963911)
chr7 (19-67)||(18914934-18914982)
chr7 (38-74)||(27418644-27418680)
chr7 (19-71)||(30440756-30440808)
chr7 (41-73)||(32630687-32630719)
chr7 (19-71)||(34008972-34009024)
chr7 (19-71)||(34695233-34695285)
chr7 (38-74)||(40097140-40097176)
chr7 (19-71)||(43581285-43581337)
chr7 (19-71)||(44343591-44343643)
chr7 (19-71)||(47879128-47879180)
chr7 (19-71)||(47914226-47914278)
[»] chr3 (89 HSPs)
chr3 (19-234)||(10728633-10728847)
chr3 (19-234)||(36674112-36674336)
chr3 (19-234)||(39038040-39038254)
chr3 (19-234)||(50762042-50762256)
chr3 (19-234)||(37454861-37455075)
chr3 (19-234)||(11431526-11431750)
chr3 (19-234)||(34484012-34484236)
chr3 (19-234)||(44906495-44906719)
chr3 (19-234)||(26107261-26107485)
chr3 (21-230)||(32580179-32580396)
chr3 (19-234)||(17946288-17946512)
chr3 (22-226)||(40897147-40897360)
chr3 (19-231)||(52810378-52810599)
chr3 (19-234)||(10660535-10660735)
chr3 (19-234)||(23753389-23753592)
chr3 (19-234)||(48379157-48379381)
chr3 (19-234)||(52617953-52618171)
chr3 (39-234)||(18749632-18749836)
chr3 (19-234)||(31646268-31646490)
chr3 (19-234)||(54628843-54629068)
chr3 (19-234)||(51737709-51737933)
chr3 (20-205)||(20832993-20833187)
chr3 (19-223)||(50903233-50903449)
chr3 (27-233)||(44276397-44276598)
chr3 (90-234)||(39842476-39842619)
chr3 (19-230)||(6035039-6035259)
chr3 (24-233)||(15492850-15493061)
chr3 (19-221)||(996081-996292)
chr3 (19-221)||(19253827-19254038)
chr3 (19-221)||(20498209-20498420)
chr3 (19-221)||(37820472-37820683)
chr3 (43-154)||(539476-539586)
chr3 (19-221)||(10139141-10139352)
chr3 (149-229)||(45862980-45863060)
chr3 (19-162)||(29030006-29030147)
chr3 (43-221)||(3206200-3206387)
chr3 (19-221)||(3999640-3999851)
chr3 (19-221)||(6589564-6589775)
chr3 (19-196)||(6975749-6975922)
chr3 (90-221)||(27899415-27899545)
chr3 (19-218)||(33807796-33808005)
chr3 (19-221)||(40246844-40247055)
chr3 (19-162)||(35337735-35337877)
chr3 (19-221)||(44762032-44762243)
chr3 (19-159)||(33996608-33996747)
chr3 (19-162)||(25418366-25418508)
chr3 (96-221)||(5825139-5825273)
chr3 (19-120)||(12103629-12103730)
chr3 (19-221)||(29448853-29449064)
chr3 (19-160)||(53929194-53929334)
chr3 (19-221)||(54625592-54625803)
chr3 (19-158)||(1440020-1440159)
chr3 (23-162)||(52114532-52114671)
chr3 (19-77)||(18749570-18749628)
chr3 (19-162)||(51699544-51699685)
chr3 (32-158)||(55235198-55235322)
chr3 (95-162)||(22057838-22057904)
chr3 (95-221)||(52080003-52080122)
chr3 (141-221)||(6131228-6131308)
chr3 (19-60)||(27240408-27240449)
chr3 (19-69)||(6131327-6131377)
chr3 (90-147)||(23535890-23535946)
chr3 (122-162)||(1439958-1439998)
chr3 (19-71)||(3206392-3206444)
chr3 (19-71)||(23753582-23753634)
chr3 (19-63)||(27899386-27899430)
chr3 (166-218)||(33807678-33807730)
chr3 (17-71)||(3999841-3999895)
chr3 (19-69)||(10660493-10660543)
chr3 (19-69)||(36674328-36674378)
chr3 (24-69)||(6975712-6975757)
chr3 (37-74)||(19552150-19552187)
chr3 (19-64)||(44276347-44276392)
chr3 (19-71)||(1440149-1440200)
chr3 (19-71)||(10139342-10139394)
chr3 (19-71)||(19253785-19253837)
chr3 (38-74)||(26555860-26555896)
chr3 (38-74)||(27593198-27593234)
chr3 (38-74)||(30588885-30588921)
chr3 (19-71)||(35337693-35337745)
chr3 (38-74)||(36055009-36055045)
chr3 (38-74)||(36786017-36786053)
chr3 (19-71)||(37820673-37820725)
chr3 (38-74)||(38629802-38629838)
chr3 (38-74)||(38682472-38682508)
chr3 (19-71)||(44762233-44762285)
chr3 (38-74)||(50900449-50900485)
chr3 (42-74)||(52024201-52024233)
chr3 (38-74)||(53184075-53184111)
[»] chr1 (63 HSPs)
chr1 (19-234)||(38536081-38536295)
chr1 (19-234)||(38558299-38558513)
chr1 (19-234)||(6312568-6312792)
chr1 (19-234)||(25612151-25612375)
chr1 (19-234)||(29396370-29396594)
chr1 (19-234)||(51701574-51701798)
chr1 (19-233)||(29219282-29219493)
chr1 (19-231)||(48177447-48177668)
chr1 (19-234)||(18798485-18798689)
chr1 (19-230)||(9322486-9322706)
chr1 (19-234)||(15835035-15835259)
chr1 (19-234)||(28387375-28387599)
chr1 (19-234)||(46328036-46328260)
chr1 (19-231)||(48668770-48668978)
chr1 (19-205)||(5495117-5495302)
chr1 (19-234)||(45272581-45272793)
chr1 (19-230)||(9577418-9577638)
chr1 (19-148)||(49230880-49231008)
chr1 (19-218)||(21222141-21222349)
chr1 (19-221)||(19451803-19452014)
chr1 (19-209)||(35279666-35279865)
chr1 (19-221)||(50192545-50192757)
chr1 (19-221)||(28824368-28824578)
chr1 (19-219)||(35679125-35679334)
chr1 (19-221)||(6304247-6304459)
chr1 (19-161)||(32589018-32589159)
chr1 (19-221)||(37014635-37014846)
chr1 (90-209)||(33025578-33025696)
chr1 (19-221)||(45760004-45760216)
chr1 (95-221)||(49198264-49198399)
chr1 (19-221)||(47780705-47780916)
chr1 (19-161)||(730142-730284)
chr1 (19-221)||(47654346-47654558)
chr1 (19-69)||(8141284-8141334)
chr1 (19-162)||(45535938-45536080)
chr1 (90-209)||(49418149-49418277)
chr1 (93-162)||(31572261-31572329)
chr1 (90-162)||(48524384-48524455)
chr1 (90-162)||(51085860-51085931)
chr1 (99-158)||(29556178-29556236)
chr1 (98-172)||(955823-955896)
chr1 (19-71)||(22183364-22183416)
chr1 (19-149)||(47784381-47784509)
chr1 (19-69)||(953813-953863)
chr1 (19-71)||(28824568-28824620)
chr1 (93-149)||(31622536-31622591)
chr1 (19-71)||(49198464-49198515)
chr1 (112-159)||(43885157-43885203)
chr1 (19-74)||(48524271-48524326)
chr1 (19-69)||(15835251-15835301)
chr1 (19-69)||(19452048-19452098)
chr1 (19-69)||(25612109-25612159)
chr1 (37-74)||(10896845-10896882)
chr1 (19-64)||(49198429-49198474)
chr1 (19-71)||(730100-730152)
chr1 (19-71)||(953771-953823)
chr1 (38-74)||(1928406-1928442)
chr1 (19-71)||(14494161-14494213)
chr1 (19-71)||(19452004-19452056)
chr1 (19-71)||(28387589-28387641)
chr1 (19-71)||(35679324-35679376)
chr1 (38-74)||(36402293-36402329)
chr1 (38-74)||(52705439-52705475)
[»] chr8 (55 HSPs)
chr8 (19-234)||(16362197-16362411)
chr8 (19-234)||(18305952-18306166)
chr8 (19-234)||(14782116-14782340)
chr8 (19-234)||(44725791-44726015)
chr8 (19-234)||(7466336-7466550)
chr8 (19-234)||(32497526-32497740)
chr8 (19-234)||(42305776-42305990)
chr8 (19-234)||(9288438-9288662)
chr8 (19-234)||(19717862-19718086)
chr8 (19-234)||(18958708-18958932)
chr8 (19-234)||(39467449-39467673)
chr8 (19-234)||(31623696-31623900)
chr8 (43-234)||(37857144-37857334)
chr8 (19-234)||(10295360-10295586)
chr8 (19-234)||(26856067-26856292)
chr8 (19-234)||(4403108-4403332)
chr8 (19-234)||(43166671-43166895)
chr8 (19-199)||(4031294-4031463)
chr8 (19-221)||(43959659-43959859)
chr8 (19-221)||(26374424-26374635)
chr8 (19-221)||(24501807-24502018)
chr8 (19-221)||(41479098-41479299)
chr8 (19-221)||(42938111-42938322)
chr8 (19-221)||(2704813-2705024)
chr8 (19-162)||(10392300-10392442)
chr8 (19-233)||(39189798-39190018)
chr8 (19-221)||(42937354-42937563)
chr8 (19-221)||(7506893-7507104)
chr8 (19-221)||(5576614-5576826)
chr8 (19-221)||(23115163-23115373)
chr8 (19-221)||(42735271-42735482)
chr8 (19-149)||(32711358-32711487)
chr8 (96-162)||(8410461-8410526)
chr8 (90-160)||(13478315-13478384)
chr8 (90-162)||(4950079-4950150)
chr8 (19-69)||(14782332-14782382)
chr8 (19-69)||(18958924-18958974)
chr8 (19-69)||(19718078-19718128)
chr8 (19-69)||(44726007-44726057)
chr8 (41-74)||(14061595-14061628)
chr8 (38-74)||(1606015-1606051)
chr8 (38-74)||(2112837-2112873)
chr8 (21-69)||(4031455-4031503)
chr8 (19-71)||(5576816-5576868)
chr8 (19-71)||(23115363-23115415)
chr8 (38-74)||(29260278-29260314)
chr8 (19-71)||(32711477-32711529)
chr8 (38-74)||(35142088-35142124)
chr8 (41-73)||(38806882-38806914)
chr8 (38-74)||(41386872-41386908)
chr8 (38-74)||(42275018-42275054)
chr8 (19-71)||(42735472-42735524)
chr8 (19-71)||(42938312-42938364)
chr8 (38-74)||(43605366-43605402)
chr8 (19-71)||(43959617-43959669)
[»] chr4 (87 HSPs)
chr4 (19-234)||(23987214-23987428)
chr4 (19-234)||(5441404-5441628)
chr4 (19-234)||(27768056-27768280)
chr4 (19-234)||(54341144-54341368)
chr4 (19-230)||(37828388-37828608)
chr4 (19-234)||(30967291-30967505)
chr4 (19-234)||(51320921-51321145)
chr4 (19-218)||(50018251-50018449)
chr4 (20-234)||(32322092-32322315)
chr4 (19-234)||(49501501-49501717)
chr4 (19-234)||(49507566-49507782)
chr4 (19-234)||(54853450-54853674)
chr4 (19-234)||(37915827-37916051)
chr4 (24-233)||(12913229-12913437)
chr4 (19-234)||(32683990-32684193)
chr4 (19-230)||(36479228-36479437)
chr4 (19-234)||(49834815-49835019)
chr4 (90-234)||(48261198-48261351)
chr4 (43-230)||(28483923-28484108)
chr4 (19-234)||(5799977-5800192)
chr4 (27-163)||(29649730-29649865)
chr4 (19-234)||(41725125-41725343)
chr4 (19-162)||(9163076-9163218)
chr4 (19-226)||(40537150-40537351)
chr4 (19-162)||(44770917-44771060)
chr4 (19-218)||(55302843-55303051)
chr4 (96-221)||(56445350-56445474)
chr4 (19-221)||(1112893-1113104)
chr4 (19-221)||(12112945-12113156)
chr4 (19-221)||(25331131-25331342)
chr4 (20-221)||(31314737-31314933)
chr4 (19-221)||(41881077-41881289)
chr4 (19-221)||(34228578-34228789)
chr4 (19-221)||(46635643-46635848)
chr4 (19-162)||(19740972-19741114)
chr4 (19-221)||(32950831-32951042)
chr4 (19-162)||(28541698-28541840)
chr4 (19-221)||(7007374-7007585)
chr4 (43-221)||(42786708-42786895)
chr4 (19-221)||(39479350-39479563)
chr4 (19-162)||(28370924-28371066)
chr4 (19-162)||(39307317-39307459)
chr4 (19-209)||(22202015-22202214)
chr4 (20-221)||(30009672-30009882)
chr4 (19-221)||(37046445-37046658)
chr4 (31-162)||(25446062-25446192)
chr4 (90-221)||(41320881-41321021)
chr4 (19-209)||(1044809-1045006)
chr4 (141-230)||(8711997-8712086)
chr4 (31-161)||(53275851-53275980)
chr4 (90-162)||(7249829-7249900)
chr4 (96-209)||(3436670-3436792)
chr4 (132-221)||(24736447-24736546)
chr4 (99-162)||(25504703-25504765)
chr4 (19-162)||(23464955-23465097)
chr4 (19-77)||(20021344-20021402)
chr4 (95-162)||(27454142-27454208)
chr4 (142-229)||(36727937-36728023)
chr4 (19-69)||(24131128-24131178)
chr4 (134-226)||(11090428-11090520)
chr4 (22-146)||(41581868-41581991)
chr4 (20-66)||(29855682-29855728)
chr4 (19-69)||(37915785-37915835)
chr4 (118-162)||(24131046-24131090)
chr4 (19-71)||(41881279-41881331)
chr4 (20-71)||(20021303-20021354)
chr4 (19-74)||(37915743-37915798)
chr4 (19-69)||(5441362-5441412)
chr4 (132-162)||(8711978-8712008)
chr4 (19-77)||(11090349-11090407)
chr4 (19-69)||(30967497-30967547)
chr4 (37-74)||(8584007-8584044)
chr4 (19-71)||(1044768-1044819)
chr4 (19-71)||(19741104-19741156)
chr4 (110-158)||(20021424-20021471)
chr4 (19-71)||(22201973-22202025)
chr4 (19-71)||(24131168-24131220)
chr4 (19-71)||(25331089-25331141)
chr4 (19-71)||(25504835-25504887)
chr4 (19-71)||(28541656-28541708)
chr4 (19-71)||(32951032-32951084)
chr4 (19-71)||(37046648-37046700)
chr4 (19-71)||(39479553-39479605)
chr4 (38-74)||(40143822-40143858)
chr4 (29-69)||(41320788-41320828)
chr4 (38-74)||(44929923-44929959)
chr4 (38-74)||(54509760-54509796)
[»] chr6 (25 HSPs)
chr6 (19-234)||(31895696-31895920)
chr6 (19-234)||(14262414-14262638)
chr6 (19-230)||(30385054-30385262)
chr6 (19-209)||(34773409-34773608)
chr6 (19-234)||(34759031-34759256)
chr6 (93-234)||(31067567-31067707)
chr6 (42-234)||(7497099-7497299)
chr6 (118-234)||(4200418-4200534)
chr6 (19-221)||(6197472-6197683)
chr6 (21-160)||(7051847-7051985)
chr6 (19-209)||(2300744-2300943)
chr6 (19-221)||(1391624-1391835)
chr6 (19-158)||(29076598-29076737)
chr6 (19-161)||(28002665-28002806)
chr6 (19-158)||(29111571-29111711)
chr6 (93-159)||(3848284-3848348)
chr6 (19-120)||(656966-657066)
chr6 (177-221)||(2238678-2238722)
chr6 (19-69)||(31895654-31895704)
chr6 (19-69)||(34773367-34773417)
chr6 (19-71)||(1391582-1391634)
chr6 (19-71)||(2300933-2300985)
chr6 (19-71)||(6197673-6197725)
chr6 (38-74)||(10644016-10644052)
chr6 (38-74)||(30877898-30877934)
[»] scaffold0306 (1 HSPs)
scaffold0306 (19-234)||(13883-14097)
[»] scaffold0152 (2 HSPs)
scaffold0152 (19-234)||(21230-21444)
scaffold0152 (131-234)||(28463-28567)
[»] scaffold0543 (2 HSPs)
scaffold0543 (19-234)||(10561-10785)
scaffold0543 (19-69)||(10519-10569)
[»] scaffold0110 (1 HSPs)
scaffold0110 (19-234)||(39599-39823)
[»] scaffold0922 (1 HSPs)
scaffold0922 (19-156)||(4201-4337)
[»] scaffold1504 (1 HSPs)
scaffold1504 (19-221)||(864-1075)
[»] scaffold0042 (1 HSPs)
scaffold0042 (19-234)||(58058-58282)
[»] scaffold0347 (1 HSPs)
scaffold0347 (127-234)||(14878-14985)
[»] scaffold0054 (2 HSPs)
scaffold0054 (90-218)||(36905-37042)
scaffold0054 (19-63)||(37027-37071)
[»] scaffold0400 (2 HSPs)
scaffold0400 (19-221)||(15028-15239)
scaffold0400 (19-71)||(15229-15281)
[»] scaffold0365 (2 HSPs)
scaffold0365 (19-221)||(15671-15882)
scaffold0365 (19-71)||(15872-15924)
[»] scaffold0037 (1 HSPs)
scaffold0037 (19-209)||(100212-100411)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-221)||(102094-102307)
[»] scaffold0839 (1 HSPs)
scaffold0839 (120-234)||(3674-3798)
[»] scaffold0151 (1 HSPs)
scaffold0151 (43-221)||(38600-38786)
[»] scaffold0113 (1 HSPs)
scaffold0113 (19-221)||(38890-39101)
[»] scaffold0276 (2 HSPs)
scaffold0276 (19-162)||(603-745)
scaffold0276 (19-71)||(735-787)
[»] scaffold0010 (3 HSPs)
scaffold0010 (19-76)||(233738-233795)
scaffold0010 (19-76)||(234586-234643)
scaffold0010 (19-76)||(222570-222627)
[»] scaffold0007 (1 HSPs)
scaffold0007 (98-161)||(199905-199967)
[»] scaffold0202 (1 HSPs)
scaffold0202 (38-74)||(16546-16582)
[»] scaffold0016 (1 HSPs)
scaffold0016 (38-74)||(81784-81820)


Alignment Details
Target: chr2 (Bit Score: 167; Significance: 2e-89; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 28740491 - 28740277
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  28740491 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 28740392  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28740391 t-cgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattgtt 28740293  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  28740292 tttcttttaaaagtta 28740277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 3463673 - 3463888
Alignment:
Q  19 caatcaaga-ctctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||       ||||||||||||| |||||||||||| |    
T  3463673 caatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaa-t 3463771  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgt 217  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3463772 tttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttgagattgt 3463871  T
Q  218 ttttattttaaaagtta 234  Q
    |||| ||||||||||||    
T  3463872 ttttgttttaaaagtta 3463888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 18177269 - 18177493
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       || |||||||||||||||||||||||| |    
T  18177269 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaa-t 18177367  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||||||||| || ||||||||||||||||    
T  18177368 ttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatttct 18177467  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  18177468 tgagattgtttttattttaaaagtta 18177493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 28844557 - 28844781
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  28844557 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 28844656  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||| ||||||||||||||||||||          ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  28844657 t-cgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttct 28844755  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  28844756 tgagattgtttttcttttaaaagtta 28844781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 7026606 - 7026775
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  7026606 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 7026705  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttc 189  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7026706 t-cgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 33135625 - 33135848
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| ||||||||||||||||||||||||    
T  33135625 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatt 33135724  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||| |||||||||||    
T  33135725 t-cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttct 33135822  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  33135823 tgagattgtttttcttttaaaagtta 33135848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 13833630 - 13833420
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||||||||||| ||||||| | ||       ||||| |||||||||||||||||||||||    
T  13833630 caatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaatt 13833531  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    || ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  13833530 tt-gaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttcttgagattgct 13833432  T
Q  219 tttattttaaaa 230  Q
    ||| ||||||||    
T  13833431 tttcttttaaaa 13833420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 26788786 - 26789009
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn--gtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||          |||||||||||||||||||||||||||    
T  26788786 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaaatcattcaaa 26788885  T
Q  117 ttttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 206  Q
    |||| |||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||   ||||||||||||    
T  26788886 tttt-gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat---aagatgagattt 26788981  T
Q  207 cttgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||||    
T  26788982 cttgagattgtttttattttaaaagtta 26789009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 25288161 - 25288385
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| | ||        ||||||||||||||||||||||||||||    
T  25288161 caatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatt 25288260  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||||||||||||| |||||||||          |||||||||||||||| || ||||||||||||||||||||||||||    
T  25288261 t-cgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgagatttct 25288359  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  25288360 tgagattgtttttcttttaaaagtta 25288385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 6224755 - 6224551
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatta-tttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||       ||||||||||||||||||| |||||||||    
T  6224755 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatt 6224656  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | ||||||||| |||||||||||||||||||          | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6224655 t-cgaaggattatttaataaattggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgatattgtt 6224567  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  6224566 tttcttttaaaagtta 6224551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 10657408 - 10657629
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  10657408 caatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10657507  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||| |||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||| |||||||||||||||| ||||||    
T  10657508 t-cgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttct 10657606  T
Q  209 tgagattgtttttattttaaaag 231  Q
    ||||||||||||| |||||||||    
T  10657607 tgagattgtttttcttttaaaag 10657629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 379016 - 379149
Alignment:
Q  96 tggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaa 195  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||||    
T  379016 tggtattcaaaatcattcaaatttt-gaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaagaaaaaatcgttcatgaaa 379114  T
Q  196 agatgagatttcttgagattgtttttattttaaaa 230  Q
    ||||||||||| |||||||||||||| ||||||||    
T  379115 agatgagatttattgagattgtttttcttttaaaa 379149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 10125500 - 10125285
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtctt--gaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||||| | ||||||| | ||       ||||  || ||||||||||||||||||    
T  10125500 caatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaaaatcattcaaa 10125401  T
Q  117 ttttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 216  Q
    ||| | |||||||||||||||||||| ||||||  ||||||| | ||| |||||||||||||||||||||||||| |||| | |||||||||| ||||||    
T  10125400 ttt-caaaggattgtttaataaattgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagatttcttaagattg 10125302  T
Q  217 tttttattttaaaagtt 233  Q
    ||||| |||||||||||    
T  10125301 tttttcttttaaaagtt 10125285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 3574849 - 3575049
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||| ||||||||||||||||||||    
T  3574849 caatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 3574948  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | ||||||||||||||||||||          |||||||||| ||||||||||||||| ||||| | |||| | ||||| ||||||||||||||||||||    
T  3574949 t-cgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttcttgagattgtt 3575037  T
Q  219 tttattttaaaa 230  Q
    ||| ||||||||    
T  3575038 tttcttttaaaa 3575049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 215433 - 215222
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | ||       |||| |||||||||||||||||||||| |    
T  215433 caatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaact 215334  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | | ||||||||||| ||   ||  | |    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  215333 t-caaaggattgtttgattgttt--aataaattggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttcatgagattgtt 215238  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  215237 tttcttttaaaagtta 215222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 12407382 - 12407593
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || || | ||       |||| ||||||||||||||||||||||||    
T  12407382 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 12407481  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || |||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  12407482 tt-gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttct 12407580  T
Q  209 tgagattgttttt 221  Q
    | |||||||||||    
T  12407581 taagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 16269693 - 16269904
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  16269693 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 16269792  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  16269793 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 16269891  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  16269892 taggattgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 24776357 - 24776568
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  24776357 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 24776456  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  24776457 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 24776555  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  24776556 taggattgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 20605238 - 20605449
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||| |||||    
T  20605238 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatt 20605337  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  20605338 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 20605436  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  20605437 taggattgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 31170832 - 31170621
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  31170832 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 31170733  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | | ||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  31170732 tcc-aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 31170634  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  31170633 taggattgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 43078653 - 43078789
Alignment:
Q  107 atcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaa 196  Q
    ||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||          ||||||||||||| ||||||||||||||| ||||    
T  43078653 atcattcaaattt-cgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaa 43078751  T
Q  197 gatgagatttcttgagattgtttttattttaaaagtta 234  Q
    ||| ||||||||||||||||||||| ||||||||||||    
T  43078752 gataagatttcttgagattgtttttgttttaaaagtta 43078789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 5093255 - 5093044
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||   || || | ||       |||| || |||||||||||||||||||||    
T  5093255 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaatt 5093156  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || |||||||||||||||||||  ||||||||||||||||||||          || ||||||| || ||||||||||||||| |||| |||||||||||    
T  5093155 tt-gaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttct 5093057  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  5093056 taggattgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 14198785 - 14198574
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||  ||||||||||||||||||||||||    
T  14198785 caatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatt 14198686  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||| ||||||||||||| |||||||||||    
T  14198685 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttct 14198587  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  14198586 taggattgttttt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 22551971 - 22551760
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||| || | ||       |||| |||||||||||||| |||||||||    
T  22551971 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatt 22551872  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||| ||||||||| ||||||  ||||||||||||||||||          ||| ||||||| || |||||||| ||||||||||| |||||||||||    
T  22551871 t-cgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttct 22551773  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  22551772 tatgattgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 35317064 - 35317275
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||   ||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  35317064 caatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 35317163  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| || ||||||||    
T  35317164 t-cgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttct 35317262  T
Q  209 tgagattgttttt 221  Q
    | | |||||||||    
T  35317263 taacattgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 43847648 - 43847859
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| || |||||||||||||||||||||    
T  43847648 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatt 43847747  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  || ||||||||||||||||          ||| ||||||| || |||||||||| ||||||||| |||||||||||    
T  43847748 t-cgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttct 43847846  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  43847847 taggattgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 305673 - 305464
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  305673 caatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 305574  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || ||| |||||||||||||||  ||||| |||||||||||||          ||| |||||||  | |||||||||||||||||||| |||||||||||    
T  305573 tt-gaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttct 305475  T
Q  209 tgagattgttt 219  Q
    |  ||||||||    
T  305474 taggattgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 44765777 - 44765919
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || || | ||       |||| ||||||||||||||||||||||||    
T  44765777 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 44765876  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | |||| |||||||||||||||  ||||||||||||||||||||    
T  44765877 t-cgaaagattgtttaataaataagattttgatggattttgtgg 44765919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 1789444 - 1789586
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||  | ||||||||||| | | || || | ||       |||| ||||||||||||||||||||||||    
T  1789444 caatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 1789543  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | ||||||||||||||||||||  ||||||||||||||||||||    
T  1789544 t-cgaaggattgtttaataaatcagattttgatggattttgtgg 1789586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 7027051 - 7027113
Alignment:
Q  172 aacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 234  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 7027113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 9120128 - 9120270
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||   ||||||||||||||||| | ||||||||||||||| || || | ||        ||| ||| |||||||||||||||| |||    
T  9120128 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagatt 9120227  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    ||  ||||||||||||||||||| ||||||||||||||||||||    
T  9120228 tta-aaggattgtttaataaattagattttgatggattttgtgg 9120270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 32125331 - 32125454
Alignment:
Q  95 gtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagt 184  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||          ||  ||||||| || ||||||||    
T  32125331 gtggtattcaaaatcattcaaattt-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagt 32125429  T
Q  185 ctttcatgaaaagatgagatttctt 209  Q
    |||||||||||| ||||||||||||    
T  32125430 ctttcatgaaaatatgagatttctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 26601407 - 26601253
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||||||| | || || | ||       |||  |||||||||||||||||||||| ||    
T  26601407 aatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaa-tt 26601309  T
Q  120 tcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaaca 175  Q
    ||||| | |||||||||||||  |||||||  ||||||| | ||| || |||||||    
T  26601308 tcgaatgtttgtttaataaatcagattttgtgggattttctagtgaaactttaaca 26601253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattt 147  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaatttt-gaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 20605154 - 20605204
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  20605154 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 20605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| ||||||||||||||||||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 24776315 - 24776367
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||||| | |||| |||||||||||| | |||||||||||||||    
T  24776315 caatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagatt 24776367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 7026564 - 7026614
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  7026564 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 7026614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 10125542 - 10125492
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||||||||  |||| |||||||| ||| |||||||||||||||    
T  10125542 caatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaaga 10125492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 26788744 - 26788794
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  26788744 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 26788794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 32125252 - 32125302
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||| | |||||||||||| ||||||||| || |||||||||||||||    
T  32125252 caatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaaga 32125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5093297 - 5093245
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  5093297 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 5093245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12407340 - 12407392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| |||||   ||||||||||||||||| | |||||||||||||||    
T  12407340 caatcaagattcttttcaattttaaaaaagtcttgtgttattcaatcaagatt 12407392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 16269651 - 16269703
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  16269651 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 16269703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20605112 - 20605164
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  20605112 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 20605164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20605196 - 20605248
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  20605196 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 20605248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 29940991 - 29941027
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  29940991 ttttataaaagtcttgtggtattcaatcaagattttt 29941027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 31170874 - 31170822
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  31170874 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 31170822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 45546977 - 45547013
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  45546977 ttttataaaagtcttgtggtattcaatcaagattttt 45547013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 5e-87; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 4240657 - 4240443
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  4240657 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 4240558  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4240557 t-cgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttcttgagattgtt 4240459  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  4240458 tttcttttaaaagtta 4240443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 5949110 - 5949323
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||        ||||||||||||||||||||||||||||    
T  5949110 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattcaaaatcattcaaatt 5949208  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5949209 t-cgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 5949307  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  5949308 tttcttttaaaagtta 5949323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 40013907 - 40013693
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        ||||||| ||||||||||||||||||||    
T  40013907 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatt 40013808  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40013807 t-cgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 40013709  T
Q  219 tttattttaaaagtta 234  Q
    ||| |||| |||||||    
T  40013708 tttgtttttaaagtta 40013693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 14000310 - 14000086
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  14000310 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 14000211  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  14000210 tt-gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 14000112  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  14000111 tgagattgtttttattttaaaagtta 14000086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 1461343 - 1461129
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||       |||||| | ||||||||||||||||||||    
T  1461343 caatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatt 1461244  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1461243 t-cgaaggattgtttaataaattggattttgatggattttgtactgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtt 1461145  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  1461144 tttcttttaaaagtta 1461129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 13925932 - 13926156
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||| |    
T  13925932 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 13926030  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  13926031 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgatatttct 13926130  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| || |||||||||    
T  13926131 tgagattgtttttcttctaaaagtta 13926156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 1152308 - 1152084
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | ||       |||||||||||||||||||||||||||||    
T  1152308 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 1152209  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||| ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||    
T  1152208 t-cgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttct 1152110  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    | ||||||||||| ||||||||||||    
T  1152109 taagattgtttttcttttaaaagtta 1152084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 7947778 - 7947554
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||| | ||||||||||||||||||||    
T  7947778 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatt 7947679  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| |||||||||    
T  7947678 t-cgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttct 7947580  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||| ||||||||| ||||||||||||    
T  7947579 tgaaattgtttttcttttaaaagtta 7947554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 226
Target Start/End: Complemental strand, 4550462 - 4550246
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  4550462 caatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 4550363  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||||||||||||||||| |    
T  4550362 t-cgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagatttgt 4550264  T
Q  209 tgagattgtttttatttt 226  Q
    ||||||||||||| ||||    
T  4550263 tgagattgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 22746298 - 22746501
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       |||||||| ||||||||||||||||||||    
T  22746298 caatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 22746397  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg--tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 216  Q
    | |||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  22746398 t-cgaatgattgtttaataaattgaattttgatggattttgtgggatgtaattttaacaagaaaaactctttcatgaaaagataagatttcttaagattg 22746496  T
Q  217 ttttt 221  Q
    |||||    
T  22746497 ttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 37013915 - 37014119
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | ||       |||||| ||||||||||||||||||||||    
T  37013915 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatt 37014014  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||| ||||||||||||||||||||||          | || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37014015 t-cgaagggttgtttaataaattggattttg----------tagtataattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattgtt 37014103  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  37014104 tttcttttaaaagtta 37014119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 234
Target Start/End: Original strand, 39852372 - 39852570
Alignment:
Q  45 aaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattgga 144  Q
    ||||||||||||||||||||||||| || |||| ||||       |||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt-cgaaggattgtttactaaattgga 39852470  T
Q  145 ttttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 234  Q
    |||||||||||||| |||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39852471 ttttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagtta 39852570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 21147068 - 21147279
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  21147068 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 21147167  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  21147168 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 21147266  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  21147267 taggattgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 5273124 - 5272925
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||  ||||||||||||||| | || || ||||       |||| ||||||||||||||||||||||||    
T  5273124 caatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatt 5273025  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||| |||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||||||||||||| |||| |||||||||||    
T  5273024 t-cgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttct 5272926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 14465432 - 14465290
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||| |||||||| ||  ||||||||||||||| | |||||   ||       |||||||||||||||||||||||||||||    
T  14465432 caatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatt 14465333  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | |||| ||||||||||||||| ||||||||||| |||||||||    
T  14465332 t-cgaaagattgtttaataaatcggattttgatgaattttgtgg 14465290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 139274 - 139473
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| || ||||||||||||||| |||| || | ||       |||| ||||||||||||||||||||||||    
T  139274 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 139373  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||   |||||||||||||||||| |          || |||||||| | ||||||||||||||| |||| |||||||||||    
T  139374 t-cgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttct 139472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 221
Target Start/End: Complemental strand, 33656234 - 33656035
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattg 130  Q
    |||||||||| |||||||||||| ||||||||||||||| | || || | ||        |||  |||||||||||||||||||||||| ||||||||||    
T  33656234 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaattt-cgaaggattg 33656136  T
Q  131 tttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 220  Q
    ||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||||||    
T  33656135 tttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgtttt 33656036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 9220912 - 9220711
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||  ||||||||||| | ||||||||||||| | || || | ||       ||||| || ||||||||||||||||||||    
T  9220912 caatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatt 9220813  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | | |||||||||||||| |||| || ||||  ||||||| | ||  |||||||||| ||||||||||||| |||||| |||| |||||||  |||||||    
T  9220812 t-ctaaggattgtttaatgaattagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggattgtt 9220714  T
Q  219 ttt 221  Q
    |||    
T  9220713 ttt 9220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 7016944 - 7016745
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||   |||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  7016944 caatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 7016845  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||||||||||||| |||| |||||||||||    
T  7016844 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttct 7016746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 27459154 - 27459013
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| |||||||||||||||||||| |||    
T  27459154 caattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatcattcagatt 27459056  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    || |||||||||||||||||||| ||||||||||||||||||||    
T  27459055 tt-gaaggattgtttaataaattagattttgatggattttgtgg 27459013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 6460793 - 6460932
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || || ||||        ||| ||||||||||||||||||||||||    
T  6460793 caatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatt 6460892  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttg 159  Q
    | |||||| |||||||||||||  |||||||||||||||||    
T  6460893 t-cgaaggtttgtttaataaatcagattttgatggattttg 6460932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 32158103 - 32157960
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    | || | ||        |||| |||||||||||||||||||||||    
T  32158103 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaat 32158004  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    || ||||||||||||||||||||| |||||||| |||||||||||    
T  32158003 tt-cgaaggattgtttaataaattagattttgacggattttgtgg 32157960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 849225 - 849290
Alignment:
Q  96 tggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||    
T  849225 tggtattcaaaatcattcaaattt-cgaaggattgtttaataaatcagattttgatagattttgtgg 849290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 9689730 - 9689799
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtg 161  Q
    ||||||||||||| ||||||||| ||  ||||||| |||||||| ||||||| |||||||||||||| ||||    
T  9689730 gtcttgtggtatttaaaatcattaaa--tttcgaatgattgtttgataaattagattttgatggattgtgtg 9689799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5273166 - 5273114
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| | |||||||||| |||||||||||| | |||||||||||||||    
T  5273166 caatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagatt 5273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 40013949 - 40013899
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  40013949 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 40013899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 9689371 - 9689338
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||| ||||||||||||||||||||||||||    
T  9689371 taaaaaaatcttgaggtattcaatcaagattttt 9689338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 28594477 - 28594444
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||| ||||||||||||||||||||    
T  28594477 taaaaaagtcttgtggtattcaatcaagattttt 28594444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 21147026 - 21147078
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  21147026 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 21147078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 33656290 - 33656238
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  33656290 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 33656238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 40410636 - 40410672
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  40410636 ttttataaaagtcttgtggtattcaatcaagattttt 40410672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 509651 - 509865
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  509651 caatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 509750  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||| ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  509751 t-cgaacgattgtttaataaattggattttgatggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 509849  T
Q  219 tttattttaaaagtta 234  Q
    ||||||||||||||||    
T  509850 tttattttaaaagtta 509865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 44122105 - 44121891
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||        ||||||||||||||||||||||||||||    
T  44122105 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatt 44122006  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  44122005 t-cgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttttgagattgtt 44121907  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  44121906 tttcttttaaaagtta 44121891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 23101293 - 23101517
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  23101293 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 23101391  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  23101392 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 23101491  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  23101492 tgagattgtttttattttaaaagtta 23101517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 28342342 - 28342566
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  28342342 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 28342440  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  28342441 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 28342540  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  28342541 tgagattgtttttattttaaaagtta 28342566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 39784094 - 39784318
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||| ||| |    
T  39784094 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaa-t 39784192  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  39784193 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 39784292  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  39784293 tgagattgtttttattttaaaagtta 39784318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 37327922 - 37328136
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||||||||||||||||||||||||||||    
T  37327922 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37328021  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | | |||||||||||||||||||| ||||||||||||||||| || |||||||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  37328022 t-caaaggattgtttaataaattgaattttgatggattttgtagtataattttaacaaaaaaaagtctttcatgaaaagataagattttttgagattgtt 37328120  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  37328121 tttcttttaaaagtta 37328136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 40460912 - 40460698
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  40460912 caattaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 40460813  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  40460812 t-cgaatgattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattgtt 40460714  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  40460713 tttcttttaaaagtta 40460698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 46405636 - 46405422
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  46405636 caatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 46405537  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  46405536 t-caaatgattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtatttaataaaaagatgagatttcttgagattgtt 46405438  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  46405437 tttcttttaaaagtta 46405422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 29614969 - 29614745
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||| |||||||||||||||||| |    
T  29614969 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaa-t 29614871  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  29614870 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 29614771  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||| ||||||||||||||||||    
T  29614770 tgagattatttttattttaaaagtta 29614745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 3022921 - 3023145
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  3022921 caatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 3023020  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||| |||||||||||||||||||||||    
T  3023021 t-cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttct 3023119  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  3023120 tgagattgtttttcttttaaaagtta 3023145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 29585510 - 29585723
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| || | ||       ||||| |||||||||||||||||||||||    
T  29585510 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaatcattcaaatt 29585608  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    || ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  29585609 tt-gaaggattgtttaataatttggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaatttcttgagattgtt 29585707  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  29585708 tttcttttaaaagtta 29585723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 18838384 - 18838608
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||   ||       |||||||||||||||||||||||||||||    
T  18838384 caatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18838483  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||| |||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||| |||||||||||||||||||||||    
T  18838484 t-cgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttct 18838582  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  18838583 tgagattgtttttcttttaaaagtta 18838608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 39028092 - 39028306
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||||||| ||||||||||| ||||||||    
T  39028092 caatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaatt 39028191  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
      |||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||   |||||||||||||||||||    
T  39028192 a-cgaaagattgtttaataaattggattttgatggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaaacagagatttcttgagattgtt 39028290  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  39028291 tttcttttaaaagtta 39028306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 9882441 - 9882218
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  9882441 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 9882342  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||| |||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||| |||| |||||||||||    
T  9882341 t-cgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttct 9882244  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  9882243 tgagattgtttttcttttaaaagtta 9882218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 7993137 - 7993361
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| | ||       ||||| |||||||||||||||||||||||    
T  7993137 caatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatt 7993236  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||| ||||||||||||| |||||          ||||||||||||||||||||||||||||||||||||| ||||||||    
T  7993237 t-cgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttct 7993335  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  7993336 tgagattgtttttcttttaaaagtta 7993361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 28035010 - 28034786
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       ||||||||||||||||||| |||||||||    
T  28035010 caatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatt 28034911  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||| |||||||||||||||||||||||||||||||    
T  28034910 t-caaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttct 28034812  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||| ||||||    
T  28034811 tgagattgtttttcttttacaagtta 28034786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 8675328 - 8675547
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||| ||| |    
T  8675328 caatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaact 8675427  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||| ||||| |||||||||||||||||||    
T  8675428 t-cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttct 8675526  T
Q  209 tgagattgtttttattttaaa 229  Q
    ||||||||||||| |||||||    
T  8675527 tgagattgtttttcttttaaa 8675547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 33892455 - 33892269
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  33892455 caatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatt 33892356  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 206  Q
    | |||| ||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  33892355 t-cgaatgattgttaaataaattggatttttatgaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgagattt 33892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 33382632 - 33382852
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||  ||||||||||||||||| |||||    
T  33382632 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatt 33382731  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||| ||||||||||||||||| |    
T  33382732 t-cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttat 33382830  T
Q  209 tgagattgtttttattttaaaa 230  Q
    | ||||||||||| ||||||||    
T  33382831 ttagattgtttttcttttaaaa 33382852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 19251534 - 19251734
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||       |||| ||||||||||||||||||||||||    
T  19251534 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatt 19251633  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||||||||||||||||||||||||| | ||| ||||||| ||| |||||||||||||||||||  ||| |||||||| |||| ||    
T  19251634 t-cgaaggattgtttaataaattggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttcttgggattatt 19251732  T
Q  219 tt 220  Q
    ||    
T  19251733 tt 19251734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 12740368 - 12740591
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||       |||| |||||||||||||||||||||| |    
T  12740368 caatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaa-t 12740466  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    ||| ||||||||||||||||| ||||||||||| |||||||||          ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  12740467 ttcaaaggattgtttaataaa-tggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttct 12740565  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    | ||||||||||  ||||||||||||    
T  12740566 taagattgttttacttttaaaagtta 12740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 3797262 - 3797052
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||| |||||| |||||    
T  3797262 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaatt 3797163  T
Q  119 ttcgaaggattgtttaataaattggattttgat-ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgt 217  Q
    || |||||||||||||||||||| ||||||||| ||||||| | ||| ||||||| || |||||||||||| | ||||| || |||||||||  ||||||    
T  3797162 tt-gaaggattgtttaataaattagattttgatgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttaggattgt 3797065  T
Q  218 ttttattttaaaa 230  Q
    |||| ||||||||    
T  3797064 ttttcttttaaaa 3797052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 12963696 - 12963838
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||       |||| ||||||| |||||||||||||| |    
T  12963696 caatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaa-t 12963794  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  12963795 ttcgaaggattgtttaataaattagattttgatggattttgtgg 12963838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 44256970 - 44256747
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||| | ||       || | |||||||||||||||||||||||||    
T  44256970 aatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaattt 44256871  T
Q  120 tcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 209  Q
     |||| |||||||||||||||||||||| |||| ||||||| |          |||||||||||||||||||||| |||||| |||| ||||||||| ||    
T  44256870 -cgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagatttttt 44256772  T
Q  210 gagattgtttttattttaaaagtta 234  Q
    |||||||||||| ||||||||||||    
T  44256771 gagattgtttttcttttaaaagtta 44256747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 41827309 - 41827523
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||| | ||       |||||||||||||||||||              
T  41827309 caatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat---------- 41827398  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
     | |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| |||||||||||||| |||||||||||    
T  41827399 -ttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttct 41827497  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  41827498 tgagattgtttttcttttaaaagtta 41827523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 17001228 - 17001037
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| | ||        | | ||||||||||||||||||||||||    
T  17001228 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaatcattcaaatt 17001129  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||||||||||||||||          | |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  17001128 t-cgaaggattgtttaataaattggattttg----------tagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttcttgatattgtt 17001040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 10068462 - 10068682
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  10068462 aatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10068561  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || ||||||||||||||||||||  ||||||||||||||||||          ||| ||||||| || |||||||| |||||| |||| ||||||||| |    
T  10068562 tt-gaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgt 10068660  T
Q  209 tgagattgtttttattttaaaa 230  Q
    |  |||||||||| ||||||||    
T  10068661 taggattgtttttcttttaaaa 10068682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 47066698 - 47066881
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||| |  |||||| | ||        ||||||||||||||||||||||||||||    
T  47066698 caatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaat 47066797  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 212  Q
    || ||||||||||||||||||||          |||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  47066798 tt-cgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttcttgag 47066881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 32883777 - 32883919
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| |||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  32883777 caatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 32883876  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | |||| ||||||||| |||||||||||||||||||||| ||||    
T  32883877 t-cgaatgattgtttattaaattggattttgatggatttcgtgg 32883919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 973186 - 973397
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        | | ||||||||||||||||||||||||    
T  973186 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatt 973285  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  973286 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttct 973384  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  973385 taggattgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 47914268 - 47914479
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||| ||||||||||||||||||||    
T  47914268 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatt 47914367  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  47914368 t-cgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 47914466  T
Q  209 tgagattgttttt 221  Q
    | |||||||||||    
T  47914467 taagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 37972974 - 37972848
Alignment:
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||||||| |||    
T  37972974 tttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagacttc 37972875  T
Q  208 ttgagattgtttttattttaaaagtta 234  Q
    |||||||||||||| ||||||||||||    
T  37972874 ttgagattgtttttcttttaaaagtta 37972848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 9179875 - 9180076
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||| |||  |||||||||||||| | ||||| | ||       |||||||||||| |||||||| | |||||    
T  9179875 caatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaatt 9179974  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
      |||||||||||||||||||||||||||||  ||||||| | ||| | ||||| ||  ||||||||||||||||||| ||||||||||||  |||||||    
T  9179975 c-cgaaggattgtttaataaattggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggattgtt 9180073  T
Q  219 ttt 221  Q
    |||    
T  9180074 ttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 40996854 - 40996643
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || ||   ||       |||| ||||||||||||||||||||||||    
T  40996854 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatt 40996755  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttg----------tggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||          | ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  40996754 t-cgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 40996656  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  40996655 taggattgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 43581295 - 43581096
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  43581295 caatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 43581196  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  43581195 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 43581097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 12893410 - 12893621
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| |||||| |||||||| | || || | ||       ||||  |||||||||||||||||||||||    
T  12893410 caatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatt 12893509  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||| ||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  12893510 t-cgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 12893608  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  12893609 taggattgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 30440798 - 30441009
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  30440798 caatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 30440897  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| |||||||  | ||||||||||||| |||||| |||||||||||    
T  30440898 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttct 30440996  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  30440997 taggattgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 43187485 - 43187339
Alignment:
Q  96 tggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtc 185  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| |          || ||||||||||||||||||||    
T  43187485 tggtattcaaaatcattcaaatttt-gaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtc 43187387  T
Q  186 tttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 233  Q
    ||||||||| | ||||||||| ||| |||||||||| |||||||||||    
T  43187386 tttcatgaagacatgagattttttgggattgtttttcttttaaaagtt 43187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 47879170 - 47879381
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||| ||||||||||||||||||||    
T  47879170 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatt 47879269  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |   ||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  47879270 taa-aaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 47879368  T
Q  209 tgagattgttttt 221  Q
    | |||||||||||    
T  47879369 taagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 221
Target Start/End: Complemental strand, 7719453 - 7719254
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattg 130  Q
    |||||||||| |||||||||||| ||||||||||||||| | || || | ||        ||| ||||||||||||||||||||||||| |||| |||||    
T  7719453 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaattt-cgaatgattg 7719355  T
Q  131 tttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 220  Q
    ||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||||||    
T  7719354 tttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttt 7719255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 18914940 - 18914729
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | |||||||| ||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  18914940 caatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 18914841  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | | |||| |||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  18914840 t-caaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 18914742  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  18914741 taggattgttttt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 34695275 - 34695486
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || ||||||||| |||||||| ||| ||||||||||||||| | || || | ||       |||  ||||||||||||| ||||||||||    
T  34695275 caatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatt 34695374  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  34695375 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 34695473  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  34695474 taggattgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 44343601 - 44343390
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| | ||||||||||||| | || || | ||       || | |||||||| |||||||||||||||    
T  44343601 caatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatt 44343502  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||| ||||| |||||||||||    
T  44343501 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttct 44343403  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  44343402 taggattgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 19810874 - 19810996
Alignment:
Q  99 tattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaaga 198  Q
    ||||||||||||||||||||| | || ||||||||||||||||||||||||  | ||||| | ||| ||||||| ||  |||| |||||||||||||| |    
T  19810874 tattcaaaatcattcaaattt-caaatgattgtttaataaattggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaaca 19810972  T
Q  199 tgagatttcttgagattgttttta 222  Q
    ||||||||||||||||||||||||    
T  19810973 tgagatttcttgagattgttttta 19810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 221
Target Start/End: Complemental strand, 7718549 - 7718356
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaat 136  Q
    |||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt-cgaaggattgtttaat 7718451  T
Q  137 aaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 221  Q
    ||||  |||||||||||||||||||          ||| ||||||| || |||||| ||||||||||||| ||||||||||||  ||||||||||    
T  7718450 aaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 20275468 - 20275326
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || ||||||||| |||||||||||  ||||||||||||||| | || || | ||       ||||| |||||||||||||||||||||||    
T  20275468 caatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatt 20275369  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | ||||||||||||||||||||  ||||||||||||||||||||    
T  20275368 t-cgaaggattgtttaataaatcagattttgatggattttgtgg 20275326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 10676624 - 10676487
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||||||||||||  |||| ||||| |||||| ||||||||||||||| ||||||| | ||       ||||  | ||||||||||||||||||||||    
T  10676624 aatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaattt 10676525  T
Q  120 tcgaaggattgtttaataaattggattttgatggatttt 158  Q
     ||||||||||||||||||||||||||| ||||||||||    
T  10676524 -cgaaggattgtttaataaattggatttggatggatttt 10676487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 32143046 - 32142911
Alignment:
Q  95 gtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagt 184  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||||||    
T  32143046 gtggtattcaaaatcattcaaatttt-gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 32142948  T
Q  185 ctttcatgaaaagatgagatttcttgagattgttttt 221  Q
    ||| ||| |||| |||||||||||| |||||||||||    
T  32142947 cttccataaaaacatgagatttcttaagattgttttt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 34009014 - 34009157
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtctt-gtggtattcaaaatcattcaaat 117  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||| | | || || | ||       ||| | |||||||||||||||||||||||    
T  34009014 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaat 34009113  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    || ||||||||||||||||||||  ||||||||||||||||||||    
T  34009114 tt-cgaaggattgtttaataaatcagattttgatggattttgtgg 34009157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 25805687 - 25805829
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||| |||| |||||| ||| | ||||||||||||| ||||||||| | ||          ||||||||||||||||||||||||||    
T  25805687 caatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaaatcattcaaatt 25805786  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | || ||||||||||||||||||| ||| |||||||||||||||    
T  25805787 t-cgtaggattgtttaataaattgaattatgatggattttgtgg 25805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 43679492 - 43679558
Alignment:
Q  95 gtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  43679492 gtggtattcaaaatcattcaaattt-cgaaggattgtttaataaatcagattttgatggattttgtgg 43679558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 727594 - 727691
Alignment:
Q  98 gtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaa 196  Q
    |||||||||||||||||||||| | ||||||||||||||||||  |||||||  ||||||| | ||| ||||||| || ||||||||||||||||||||    
T  727594 gtattcaaaatcattcaaattt-caaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 727691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 44623481 - 44623295
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||| | ||||| | ||       |||| ||| |||||||||||||||| | |    
T  44623481 caatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcata-t 44623383  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 206  Q
    ||| || || |||||||||||||| ||||||  | ||||| | ||| |||||||  | |||||||||| |||| |||| |||| ||||    
T  44623382 ttctaaagactgtttaataaattgaattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 31638948 - 31639015
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggatttt 158  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  31638948 gtctagtggtattcaaaatcattcaaattt-cgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 29893076 - 29893176
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||| | ||       ||||||| ||||| ||||| |||||||||    
T  29893076 caatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaaaataattcaaatt 29893175  T
Q  119 t 119  Q
    |    
T  29893176 t 29893176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 39219504 - 39219371
Alignment:
Q  96 tggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtc 185  Q
    |||||||||||||||||||||||||   | |||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||    
T  39219504 tggtattcaaaatcattcaaattttg--atgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 39219407  T
Q  186 tttcatgaaaagatgagatttcttgagattgttttt 221  Q
    |||||| |||| ||||||||||||  ||||||||||    
T  39219406 tttcataaaaacatgagatttcttaggattgttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 447852 - 447913
Alignment:
Q  93 ttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggat 155  Q
    |||||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaattt-cgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 48117798 - 48117748
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  48117798 caatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaaga 48117748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 7113530 - 7113665
Alignment:
Q  95 gtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgt----------aattttaacaagaaaaagt 184  Q
    |||||||||||||| |||||||||| || |||||||||||||||||  ||||||||| ||||||||||  |          ||||||| || ||||||||    
T  7113530 gtggtattcaaaataattcaaattt-cgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagt 7113628  T
Q  185 ctttcatgaaaagatgagatttcttgagattgttttt 221  Q
    |||||||||||| |||| |||||||  ||||||||||    
T  7113629 ctttcatgaaaacatgaaatttcttaggattgttttt 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 1470437 - 1470307
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||| |||||||||| |||||||||||| | ||||||||  | | ||||||| ||||       || ||||||||||||||||| ||||||||    
T  1470437 caattaagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcatttaaaaaa-gtattgtggtattcaaaatcgttcaaatt 1470339  T
Q  119 ttcgaaggattgtttaataaattggattttgat 151  Q
    ||  ||| |||||||||| |||| |||||||||    
T  1470338 tt-aaagcattgtttaatgaattagattttgat 1470307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 10616955 - 10616997
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttt 73  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  10616955 tttgtcatttttaaaaagtcttgaggtattcgatcaagatttt 10616997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 32883944 - 32883986
Alignment:
Q  192 gaaaagatgagatttcttgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  32883944 gaaaagatgagatttattgagattgtttttcttttaaaagtta 32883986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 12963654 - 12963704
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||||||||  | || |||||||||||| |||||||||||||||    
T  12963654 caatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaaga 12963704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 19251492 - 19251542
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||||||||  | || |||||||||||| |||||||||||||||    
T  19251492 caatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaaga 19251542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 29615011 - 29614961
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  29615011 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 29614961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 34695191 - 34695241
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||   |||| |||||||||||| |||||||||||||||    
T  34695191 caatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaaga 34695241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 39784052 - 39784102
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  39784052 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 39784102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 43187590 - 43187545
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 64  Q
    ||||||||||||||||| |||| |||||||||||  ||||||||||    
T  43187590 caatcaagactctttgtaatttaaaaaaagtcttatggtattcaat 43187545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 727514 - 727562
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    ||||||| | |||||||||||| |||||||||||| | |||||||||||    
T  727514 caatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaa 727562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12893368 - 12893420
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  12893368 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 12893420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 12963879 - 12963911
Alignment:
Q  198 atgagatttcttgagattgtttttattttaaaa 230  Q
    |||||||||||||||||||||||| ||||||||    
T  12963879 atgagatttcttgagattgtttttcttttaaaa 12963911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 18914982 - 18914934
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    |||||||||||||||   ||||||||||||||||| | |||||||||||    
T  18914982 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaa 18914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 27418680 - 27418644
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  27418680 ttttataaaagtcttgtggtattcaatcaagattttt 27418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 30440756 - 30440808
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  30440756 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 30440808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 32630687 - 32630719
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagatttt 73  Q
    ||||||| |||||||||||||||||||||||||    
T  32630687 taaaaaaatcttgaggtattcaatcaagatttt 32630719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34008972 - 34009024
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  34008972 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 34009024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34695233 - 34695285
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  34695233 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 34695285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 43581337 - 43581285
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  43581337 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 43581285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44343643 - 44343591
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  44343643 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 44343591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 47879128 - 47879180
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||| |||||||   ||||||||||||||||| | |||||||||||||||    
T  47879128 caatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaagatt 47879180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 47914226 - 47914278
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||| |||||||   ||||||||||||||||| | |||||||||||||||    
T  47914226 caatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaagatt 47914278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 10728847 - 10728633
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||||||||||| |||||||||||||||    
T  10728847 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatt 10728748  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    |  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10728747 tg-gaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 10728649  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  10728648 tttcttttaaaagtta 10728633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 36674336 - 36674112
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  36674336 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 36674237  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  36674236 tt-gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 36674138  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  36674137 tgagattgtttttattttaaaagtta 36674112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 39038040 - 39038254
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||| ||||||||||||||||    
T  39038040 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatt 39038139  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  39038140 t-cgaagaattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgaaattgtt 39038238  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  39038239 tttcttttaaaagtta 39038254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 50762256 - 50762042
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||||       |||||||||||||||||||||||| ||||    
T  50762256 caatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaatcattctaatt 50762157  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50762156 t-cgaatgattgtttgataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 50762058  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  50762057 tttcttttaaaagtta 50762042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 37454861 - 37455075
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  37454861 caatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37454960  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||| ||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37454961 t-cgaatgattgtttaataaattgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgtt 37455059  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  37455060 tttcttttaaaagtta 37455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 11431526 - 11431750
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||| ||| |    
T  11431526 caataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaa-t 11431624  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    ||||||||||||||||||||||||||||||| |||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  11431625 ttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 11431724  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  11431725 tgagattgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 34484236 - 34484012
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       || |||||||||||||||||||||||| |    
T  34484236 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaa-t 34484138  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| |||||||||||||||||||||||||    
T  34484137 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttct 34484038  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  34484037 tgagattgtttttgttttaaaagtta 34484012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 44906719 - 44906495
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  44906719 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 44906620  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||||||||||||||||||||||    
T  44906619 t-cgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttct 44906521  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  44906520 tgagattgtttttcttttaaaagtta 44906495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 26107261 - 26107485
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  26107261 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatt 26107360  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  26107361 t-cgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttct 26107459  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  26107460 tgagattgtttttcttttaaaagtta 26107485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 21 - 230
Target Start/End: Original strand, 32580179 - 32580396
Alignment:
Q  21 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatttt 120  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||       ||||||||||||||||||||||||||||||     
T  32580179 atcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt- 32580276  T
Q  121 cgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 210  Q
    |||||||||||||||||||||||||||||||          ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32580277 cgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 32580376  T
Q  211 agattgtttttattttaaaa 230  Q
    ||||||||||||||||||||    
T  32580377 agattgtttttattttaaaa 32580396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 17946288 - 17946512
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| ||| ||||||||||||||||||||    
T  17946288 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatt 17946387  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  17946388 t-caaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 17946486  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  17946487 tgagattgtttttcttttaaaagtta 17946512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 226
Target Start/End: Original strand, 40897147 - 40897360
Alignment:
Q  22 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttc 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||| |||||||||||||||||||||||| |    
T  40897147 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaattt-c 40897245  T
Q  122 gaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 211  Q
    |||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40897246 gaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 40897345  T
Q  212 gattgtttttatttt 226  Q
     ||||||||| ||||    
T  40897346 tattgtttttctttt 40897360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 52810378 - 52810599
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  52810378 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 52810477  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || ||| ||||||||||||||||| ||||||||||||||||||          | ||||||||||||||||||| |||||||||||||||||||||||||    
T  52810478 tt-gaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttct 52810576  T
Q  209 tgagattgtttttattttaaaag 231  Q
    ||||||||||||| |||||||||    
T  52810577 tgagattgtttttcttttaaaag 52810599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 10660535 - 10660735
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       || |||||||||||||||||||||||| |    
T  10660535 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaa-t 10660633  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||              |||||||||||||||||||||||||||||    
T  10660634 ttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaaca--------------atgaaaagatgagatttcttgagattgtt 10660719  T
Q  219 tttattttaaaagtta 234  Q
    ||||||||||||||||    
T  10660720 tttattttaaaagtta 10660735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 23753592 - 23753389
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  23753592 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 23753494  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    ||||||||||||||||||||||          |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23753493 ttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtctttcatg-aaagatgagatttcttgagattgtt 23753405  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  23753404 tttgttttaaaagtta 23753389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 48379157 - 48379381
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  48379157 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 48379256  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||| |||||||||||||||||||          ||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  48379257 t-cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttct 48379355  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||| ||||    
T  48379356 tgagattgtttttcttttaaatgtta 48379381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 52618171 - 52617953
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  52618171 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 52618072  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||||||||||||||||||||||          |||||||||||||      ||||||||||| ||||||||||||||||    
T  52618071 t-cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac------aagtctttcataaaaagatgagatttct 52617979  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  52617978 tgagattgtttttcttttaaaagtta 52617953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 39 - 234
Target Start/End: Original strand, 18749632 - 18749836
Alignment:
Q  39 tttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataa 138  Q
    |||||||||||||||||||||||||| || | ||||||| | ||       |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18749632 tttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt-cgaaggattgtttaataa 18749730  T
Q  139 attggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaa 228  Q
    ||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18749731 attggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaa 18749830  T
Q  229 aagtta 234  Q
    ||||||    
T  18749831 aagtta 18749836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 31646490 - 31646268
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| ||||        ||||||||||||||||||||||||||||    
T  31646490 caatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 31646391  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||| ||||||||||| |||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||  |||||||||||    
T  31646390 t-cgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa--atgagatttct 31646294  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    |||||||||| || ||||||||||||    
T  31646293 tgagattgttattcttttaaaagtta 31646268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 54628843 - 54629068
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnng-tcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |            |||||||||||||||||||||||||||    
T  54628843 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattcaaat 54628942  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||||||||||||    
T  54628943 tt-caaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttc 54629041  T
Q  208 ttgagattgtttttattttaaaagtta 234  Q
    |||||||||||||| |||| |||||||    
T  54629042 ttgagattgtttttcttttgaaagtta 54629068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 51737933 - 51737709
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||    
T  51737933 caatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 51737834  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || |||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| ||||||| ||  |||    
T  51737833 tt-cgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaagataagtattc 51737735  T
Q  208 ttgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||  |||||||||||    
T  51737734 ttgagattgttttt-ctttaaaagtta 51737709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 20 - 205
Target Start/End: Original strand, 20832993 - 20833187
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||     
T  20832993 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattc 20833092  T
Q  120 tcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 205  Q
      ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||||||||||| |||||    
T  20833093 g-gaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 50903449 - 50903233
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn---gtcttgtggtattcaaaatcattcaa 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||          ||||||||||||||||||||||||||    
T  50903449 caatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaaaatcattcaa 50903350  T
Q  116 attttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 205  Q
    |||   |||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||| ||||| ||||||| ||||||||    
T  50903349 attaa-gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatt 50903251  T
Q  206 tcttgagattgtttttat 223  Q
    ||||||||||||||||||    
T  50903250 tcttgagattgtttttat 50903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 44276397 - 44276598
Alignment:
Q  27 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaagg 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||  |||||||||||||||||||||||     |||    
T  44276397 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt-----agg 44276491  T
Q  127 attgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 226  Q
    |||||||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||| | ||||||||| ||| |||| ||||| ||||    
T  44276492 attgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggattatttttctttt 44276591  T
Q  227 aaaagtt 233  Q
    |||||||    
T  44276592 aaaagtt 44276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 90 - 234
Target Start/End: Complemental strand, 39842619 - 39842476
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttc 189  Q
    |||| ||| ||||||||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||  |||||||||||||||||||||||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaattt-cgaagaattgtttaataaattagattttgacggattttgtaatgtaattttaacaagaaaaagtctttc 39842521  T
Q  190 atgaaaagatgagatttcttgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||    
T  39842520 atgaaaagatgagatttcttgggattgtttttcttttaaaagtta 39842476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 6035259 - 6035039
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||       |||| ||| |||||||||||||||||| |    
T  6035259 caatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaa-t 6035161  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    ||||||| | ||||||||||||| |||||||||||||||||||          ||  ||||||| || ||||||||||||||| |||| |||||||||||    
T  6035160 ttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttct 6035061  T
Q  209 tgagattgtttttattttaaaa 230  Q
    | ||||||||||| ||||||||    
T  6035060 taagattgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 15493061 - 15492850
Alignment:
Q  24 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcga 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       ||||  |||||||||||||||||||||||||  |    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaat-gtctcatggtattcaaaatcattcaaatttttaa 15492963  T
Q  124 ---aggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 220  Q
       || ||| |||||||||||||||||||  |||| || | ||| ||||||||||||||||| |||||||||||   || ||||||||||||||||||||    
T  15492962 ttaagaattatttaataaattggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgtttt 15492863  T
Q  221 tattttaaaagtt 233  Q
    |||||||||||||    
T  15492862 tattttaaaagtt 15492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 996292 - 996081
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||| |||||| |||||||||||| ||||||||||||||||| || || | ||       |||| ||||||||||||||||||||||||    
T  996292 caatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 996193  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  996192 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 996094  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  996093 taggattgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 19253827 - 19254038
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  19253827 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 19253926  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  19253927 t-cgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 19254025  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  19254026 taggattgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 20498209 - 20498420
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  20498209 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 20498308  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  20498309 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 20498407  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  20498408 taggattgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 37820683 - 37820472
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||||||||| || || | ||       |||| ||||||||||||||||||||||||    
T  37820683 caatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 37820584  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||||||||||||| |||| |||||||||||    
T  37820583 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttct 37820485  T
Q  209 tgagattgttttt 221  Q
    | |||||||||||    
T  37820484 taagattgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 539586 - 539476
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattg 142  Q
    ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-tttcgaaggattatttaataaattg 539488  T
Q  143 gattttgatgga 154  Q
    ||||||||||||    
T  539487 gattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 10139352 - 10139141
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || || |||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  10139352 caatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 10139253  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  10139252 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 10139154  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  10139153 taggattgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 45862980 - 45863060
Alignment:
Q  149 gatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 229  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45862980 gatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 29030006 - 29030147
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||||||||||||||||||||||||||||    
T  29030006 caattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaatt 29030104  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    || |||||||||||||||||||  ||||||||||||||||||||    
T  29030105 tt-gaaggattgtttaataaatcagattttgatggattttgtgg 29030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 221
Target Start/End: Complemental strand, 3206387 - 3206200
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattg 142  Q
    ||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||| ||||||||||||||||||||      
T  3206387 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt-cgaaggattgtttaataaatca 3206289  T
Q  143 gattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 221  Q
    |||||||||||||||||||          ||| ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  3206288 gattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 3999851 - 3999640
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        ||| ||||||||||||||||||||||||    
T  3999851 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatt 3999752  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| |||||||  | ||||||||||||||| |||| |||||||||||    
T  3999751 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttct 3999653  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  3999652 taggattgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 6589564 - 6589775
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | || ||||||||| |||||||||||| ||||||||||||||| | || || ||||       |||| ||||||||||||||||||||||||    
T  6589564 caatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatt 6589663  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||| ||| ||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  6589664 t-cgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 6589762  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  6589763 taggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 6975749 - 6975922
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  6975749 caatcaagactctttgttattttaaaa-agtcttgaggtattcaatcaagacttttcatcattt--aaaaagtcttgtggtattcaaaatcattcaaa-t 6975844  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaa 196  Q
    ||||||| ||| |||| ||||||||| ||||  ||||||| | ||  ||||| | || |||| |||||||||||||||    
T  6975845 ttcgaagaattatttactaaattggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaa 6975922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 27899415 - 27899545
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttc 189  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||  ||||||| | ||| ||||||| || |||||||||||||    
T  27899415 gtctggtggtattcaaaatcattcaaattt-cgaaggattgtttaataaatcagattttgtaggattttctagtgaaattttagcatgaaaaagtctttc 27899513  T
Q  190 atgaaaagatgagatttcttgagattgttttt 221  Q
    ||||||| |||| |||||||  ||||||||||    
T  27899514 atgaaaacatgaaatttcttatgattgttttt 27899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 33808005 - 33807796
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    |||| |||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        |||| |||||||||||||||||||||||    
T  33808005 caattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaat 33807906  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| ||||||||||    
T  33807905 tt-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 33807807  T
Q  208 ttgagattgtt 218  Q
    ||  |||||||    
T  33807806 ttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 40246844 - 40247055
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  40246844 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatt 40246943  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |  |||||||||||||||||||  |||||||||||||||||||          ||| ||||||  || |||||||||||||||||||| |||||||| ||    
T  40246944 tg-gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattcct 40247042  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  40247043 tatgattgttttt 40247055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 35337735 - 35337877
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||  |||||||||    
T  35337735 caatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatt 35337834  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | ||||||||||||||||||||  ||||||||||||||||||||    
T  35337835 t-cgaaggattgtttaataaatcagattttgatggattttgtgg 35337877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 44762243 - 44762032
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || || | ||       |||| |||||||| ||||| |||||| ||    
T  44762243 caatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtt 44762144  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  ||||||||||||||||||||          || ||||||| || |||||||||||| ||||||| |||||||||||    
T  44762143 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttct 44762045  T
Q  209 tgagattgttttt 221  Q
    | |||||||||||    
T  44762044 taagattgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 33996747 - 33996608
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        ||  ||||||||||||||||||||||||    
T  33996747 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatt 33996648  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttg 159  Q
    | ||||||||||||||||||||  |||||||||||||||||    
T  33996647 t-cgaaggattgtttaataaatcagattttgatggattttg 33996608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 25418366 - 25418508
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||| || | ||        ||| | ||||||||||||||||||||||    
T  25418366 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatt 25418465  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |   ||||||||||||||||||  ||||||||||||||||||||    
T  25418466 tga-aaggattgtttaataaatcagattttgatggattttgtgg 25418508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 5825139 - 5825273
Alignment:
Q  96 tggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtc 185  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||          ||| |||| || || ||||||| |    
T  5825139 tggtattcaaaatcattcaaatttt-gaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggc 5825237  T
Q  186 tttcatgaaaagatgagatttcttgagattgttttt 221  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  5825238 tttcatgaaaacatgagatttcttatgattgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 12103629 - 12103730
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||  |||||||||||||||||||||||    
T  12103629 caattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt 12103728  T
Q  119 tt 120  Q
    ||    
T  12103729 tt 12103730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 29449064 - 29448853
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || |||||||||  ||||||||||| | ||||||||||||| | |  || | ||       |||| ||||||||||||||||||||||||    
T  29449064 caatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 29448965  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||  ||||||| ||  ||||||||||||||||||| |||||||||||    
T  29448964 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttct 29448866  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  29448865 taggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 53929334 - 53929194
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||| ||||     
T  53929334 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaata 53929235  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgt 160  Q
    | |||| |||||||||||||||  ||||||||||||||||||    
T  53929234 t-cgaacgattgtttaataaataagattttgatggattttgt 53929194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 54625592 - 54625803
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | || ||||||||| |||||| |||||  |||||||||||||| | || || | ||       |||| |||||||||||||| |||||||||    
T  54625592 caatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatt 54625691  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||| ||||||||||| |||||||||||    
T  54625692 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttct 54625790  T
Q  209 tgagattgttttt 221  Q
    | |||||| ||||    
T  54625791 taagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 1440159 - 1440020
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||| || ||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||||||||    
T  1440159 caatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 1440060  T
Q  118 tttcgaaggattgtttaataaattggattttgatggatttt 158  Q
    || | ||||||||||||||||||  ||||||||||||||||    
T  1440059 ttcc-aaggattgtttaataaatcagattttgatggatttt 1440020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 52114532 - 52114671
Alignment:
Q  23 caagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaattttc 121  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||| |||| || | ||        |||| |||||||||||||| |||||||||| |    
T  52114532 caagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaattt-c 52114630  T
Q  122 gaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | |||||||||||||||||  ||||||||| ||||||||||    
T  52114631 gcaggattgtttaataaatcagattttgatagattttgtgg 52114671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 18749570 - 18749628
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  18749570 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcat 18749628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 51699685 - 51699544
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||||||| | || || | ||        ||| ||||||||||||||||||||||||    
T  51699685 caatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatt 51699587  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | |||||||||| |||||||||  |||||||||| |||||||||    
T  51699586 t-cgaaggattggttaataaataagattttgatgaattttgtgg 51699544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 158
Target Start/End: Original strand, 55235198 - 55235322
Alignment:
Q  32 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgt 131  Q
    |||||||||||||||||||  ||||||||||||||| | | ||||| | ||       ||||  || ||||||||||||||||||||| |||| ||||||    
T  55235198 ttgtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtctcatgatattcaaaatcattcaaattt-cgaaagattgt 55235295  T
Q  132 ttaataaattggattttgatggatttt 158  Q
    |||||||||||| ||||||||||||||    
T  55235296 ttaataaattggtttttgatggatttt 55235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 22057838 - 22057904
Alignment:
Q  95 gtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||||    
T  22057838 gtggtatttaaaatcattcaaattt-cgatggattgtttaataaatcagattttgatggattttgtgg 22057904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 52080003 - 52080122
Alignment:
Q  95 gtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaa 194  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  |||||||  ||||||| |  || ||||||| || ||||||||      ||||    
T  52080003 gtggtattcaaaatcattcaaatttt-gaaggattgtttaataaatcagattttgtgggattttctaatgaaattttagcatgaaaaagt------tgaa 52080095  T
Q  195 aagatgagatttcttgagattgttttt 221  Q
    || ||||||||||||  ||||||||||    
T  52080096 aacatgagatttcttaggattgttttt 52080122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 6131308 - 6131228
Alignment:
Q  141 tggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 221  Q
    |||||||||  ||||||| | ||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  6131308 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 27240449 - 27240408
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtatt 60  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  27240449 caatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 6131377 - 6131327
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||| ||||||||| |||||||| ||| |||||||||||||||    
T  6131377 caatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaaga 6131327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattt 147  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||| |||| |||||    
T  23535946 gtcttgtggtattcaaaatcattcaaa-tttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 1439998 - 1439958
Alignment:
Q  122 gaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |||||||||||||||||||| ||||||||| ||||||||||    
T  1439998 gaaggattgtttaataaattagattttgatagattttgtgg 1439958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 3206444 - 3206392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| |||||||||||||||||    
T  3206444 caatcaagactcttttcaatttaaaaaaagtcttgtggtattcaatcaagatt 3206392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 23753634 - 23753582
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  23753634 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagatt 23753582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 27899386 - 27899430
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 63  Q
    |||||||||||||||||||||| |||||||||| | |||||||||    
T  27899386 caatcaagactctttgtcatttaaaaaaagtctggtggtattcaa 27899430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 33807730 - 33807678
Alignment:
Q  166 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    ||||||| || |||||||||||||||||||| ||||||||||||  |||||||    
T  33807730 aattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 3999895 - 3999841
Alignment:
Q  17 cacaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||| ||| | |||| |||||||||||| | |||||||||||||||    
T  3999895 cacaatcaagactttttctaatttaaaaaaagtcttgtgttattcaatcaagatt 3999841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 10660493 - 10660543
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  10660493 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 10660543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 36674378 - 36674328
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  36674378 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 36674328  T

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Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 6975712 - 6975757
Alignment:
Q  24 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||| | || |||||||||||| |||||||||||||||    
T  6975712 aagactctttgtaacttaaaaaaagtcttgtggtattcaatcaaga 6975757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 19552187 - 19552150
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  19552187 attttataaaagtcttgtggtattcaatcaagattttt 19552150  T

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Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 44276347 - 44276392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 64  Q
    |||| |||||||||||| |||| |||||||||||| ||||||||||    
T  44276347 caattaagactctttgtaatttaaaaaaagtcttgtggtattcaat 44276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 1440200 - 1440149
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||| ||| ||| ||||||||||||||| | |||||||||||||||    
T  1440200 caatcaagactattt-tcaatttaaaaaagtcttgtgttattcaatcaagatt 1440149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10139394 - 10139342
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  10139394 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 10139342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 19253785 - 19253837
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  19253785 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19253837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 26555860 - 26555896
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  26555860 ttttataaaagtcttgtggtattcaatcaagattttt 26555896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 30588885 - 30588921
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  30588885 ttttataaaagtcttgtggtattcaatcaagattttt 30588921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 35337693 - 35337745
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  35337693 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 35337745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 36055045 - 36055009
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  36055045 ttttataaaagtcttgtggtattcaatcaagattttt 36055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37820725 - 37820673
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  37820725 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 37820673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 38629838 - 38629802
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  38629838 ttttataaaagtcttgtggtattcaatcaagattttt 38629802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 38682472 - 38682508
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  38682472 ttttaaaaaaatcttgtggtattcaatcaagattttt 38682508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44762285 - 44762233
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  44762285 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 44762233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 50900485 - 50900449
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  50900485 ttttataaaagtcttgtggtattcaatcaagattttt 50900449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 52024233 - 52024201
Alignment:
Q  42 aaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||| ||||||||||||||||||||    
T  52024233 aaaaaagtcttgtggtattcaatcaagattttt 52024201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 53184111 - 53184075
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||| | ||||||||||||||||||||    
T  53184111 ttttaaaaaagtctcgtggtattcaatcaagattttt 53184075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 38536295 - 38536081
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||||||||||| |||||||||    
T  38536295 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatt 38536196  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38536195 t-caaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 38536097  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  38536096 tttcttttaaaagtta 38536081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 38558513 - 38558299
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||||||||||| |||||||||    
T  38558513 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatt 38558414  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38558413 t-caaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 38558315  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  38558314 tttcttttaaaagtta 38558299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 6312568 - 6312792
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  6312568 caattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 6312666  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  6312667 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 6312766  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  6312767 tgagattgtttttattttaaaagtta 6312792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 25612151 - 25612375
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||| |    
T  25612151 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 25612249  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    ||| |||||||||||||||||||||||||||||||||||||||          || ||||||||||||||||||||||||||||||||||||||||||||    
T  25612250 ttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgagatttct 25612349  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  25612350 tgagattgtttttattttaaaagtta 25612375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 29396594 - 29396370
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  29396594 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 29396496  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  29396495 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 29396396  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  29396395 tgagattgtttttgttttaaaagtta 29396370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 51701574 - 51701798
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  51701574 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 51701672  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||| |    
T  51701673 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttt 51701772  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  51701773 tgagattgtttttattttaaaagtta 51701798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 29219282 - 29219493
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  29219282 caatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 29219379  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
       ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29219380 aa-gaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgtt 29219478  T
Q  219 tttattttaaaagtt 233  Q
    ||| |||||||||||    
T  29219479 tttcttttaaaagtt 29219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 48177668 - 48177447
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||       |||||||||||||||||||||||||||||    
T  48177668 caatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 48177569  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||| |||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  48177568 t-cgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 48177470  T
Q  209 tgagattgtttttattttaaaag 231  Q
    ||||||||||||| |||||||||    
T  48177469 tgagattgtttttcttttaaaag 48177447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 18798485 - 18798689
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  18798485 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 18798583  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    ||||||||||||||||||||||          |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18798584 ttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctagagattgtt 18798673  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  18798674 tttgttttaaaagtta 18798689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 9322706 - 9322486
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||       ||| ||||||||||||||||||||||| |    
T  9322706 caatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaa-t 9322608  T
Q  119 ttcgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || ||||||||||||||||||||| ||||||||          ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9322607 ttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 9322508  T
Q  209 tgagattgtttttattttaaaa 230  Q
    ||||||||||||||||||||||    
T  9322507 tgagattgtttttattttaaaa 9322486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 15835259 - 15835035
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||        ||||||||||||||||||||||||||||    
T  15835259 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 15835160  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
      | |||||||||||||||||||||||||||||||||||| |||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  15835159 g-caaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 15835061  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  15835060 tgagattgtttttgttttaaaagtta 15835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 28387599 - 28387375
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        |||||||||||||||| |||||||||||    
T  28387599 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaatt 28387500  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||||||||||||||||||||||||          | |||||||||||| |||||||||||||| ||||||||||||||||    
T  28387499 t-cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatttct 28387401  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  28387400 tgagattgtttttgttttaaaagtta 28387375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 46328036 - 46328260
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| ||||||||||||||||||||||||    
T  46328036 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatt 46328135  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  46328136 t-cgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttct 46328234  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
     || ||||||||| ||||||||||||    
T  46328235 cgaaattgtttttcttttaaaagtta 46328260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 48668978 - 48668770
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||   |||||||| | ||       |||  |||||||||||||| |||||||||    
T  48668978 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatca---tttttcatcacttaaaaaaagtcacgtggtattcaaaattattcaaatt 48668882  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||| ||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  48668881 t-cgaaagattgtttaataaattggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgttgggattgtt 48668783  T
Q  219 tttattttaaaag 231  Q
    ||| |||||||||    
T  48668782 tttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 5495302 - 5495117
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| |||||||||||||||||| |||||    
T  5495302 caattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatt 5495203  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 205  Q
    | | ||||||| |||||||||||||||||||  ||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  5495202 t-caaaggattatttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 45272581 - 45272793
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||| | ||        ||| |||||||||||||| ||| |||||    
T  45272581 caatcaaaactctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattatttaaatt 45272679  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||| ||||||||||||||||||||   |||||||| ||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||    
T  45272680 t-cgaaggat-gtttaataaattggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttttgagattgtt 45272777  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  45272778 tttcttttaaaagtta 45272793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 9577638 - 9577418
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||| | |||| || | ||       |||||||| ||||||||||||||||||||    
T  9577638 caatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 9577539  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |  ||||||||||||||||||||||||||||||||||||||||          ||| |||||||  | |||||| ||||||||||||| |||||||||||    
T  9577538 ta-gaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatgagatttct 9577440  T
Q  209 tgagattgtttttattttaaaa 230  Q
    || |||||||||| ||||||||    
T  9577439 tgggattgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 49230880 - 49231008
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||| |    
T  49230880 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 49230978  T
Q  119 ttcgaaggattgtttaataaattggatttt 148  Q
    ||||||||||| ||||||||||||||||||    
T  49230979 ttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 21222141 - 21222349
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| | ||||||||||||||||||||||    
T  21222141 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatt 21222240  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  21222241 t-cgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 21222339  T
Q  209 tgagattgtt 218  Q
    |  |||||||    
T  21222340 taggattgtt 21222349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 19452014 - 19451803
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| |||||| |||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  19452014 caatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 19451915  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||| |||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  19451914 t-cgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 19451816  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  19451815 tatgattgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 35279666 - 35279865
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||| |||||    
T  35279666 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatt 35279765  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||||| |||||||||||    
T  35279766 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttct 35279864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 50192757 - 50192545
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||||||| | || || | ||        |||| |||||||||||||||||||||||    
T  50192757 caatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaat 50192658  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    ||| |||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||     
T  50192657 ttt-gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttt 50192559  T
Q  208 ttgagattgttttt 221  Q
    ||  ||||||||||    
T  50192558 ttaggattgttttt 50192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 28824578 - 28824368
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||||| | || || | ||       ||||||||||||||||||||||||||| |    
T  28824578 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaa-t 28824480  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||| |||||||||||||||  |||||||||||||||||||          | | |||||||||| |||||||||||| || |||| |||||||||||    
T  28824479 ttcgaa-gattgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttct 28824381  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  28824380 taggattgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 35679334 - 35679125
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| |||||  |||||||||||||| | || || | ||       ||| |||||||||||||||||||||||||    
T  35679334 caatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatt 35679235  T
Q  119 ttcgaaggattgtttaataaattggattttgatgg----------attttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||          ||||| | ||| ||||||| || |||||||||||||||||| | |||||||||||    
T  35679234 t-cgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttct 35679136  T
Q  209 tgagattgttt 219  Q
    | |||||||||    
T  35679135 taagattgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 6304459 - 6304247
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattt-ttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||| ||| |  | || || | ||       |||| |||||||||||||||||||||||    
T  6304459 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 6304360  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||| |||||    
T  6304359 tt-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttc 6304261  T
Q  208 ttgagattgttttt 221  Q
    ||  ||||||||||    
T  6304260 ttatgattgttttt 6304247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 32589159 - 32589018
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| |||||  | || | ||||| || |||||||||||| | ||||| | ||       |||||||||||||||||||||||||||||    
T  32589159 caatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaatt 32589060  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg 161  Q
    || ||||||||||||||||||| ||||||||||||||||||||    
T  32589059 tt-gaaggattgtttaataaatcggattttgatggattttgtg 32589018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 37014846 - 37014635
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||  || |||||||| ||||||||||||| ||| ||||| | ||       |||||||| ||||||||||||||||||||    
T  37014846 caattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 37014747  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttg----------tggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | | || |||||||| |||||||| ||||||||||||||||          | ||| ||||||| || |||||||||| |||| |||| |||||||||||    
T  37014746 t-ctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttct 37014648  T
Q  209 tgagattgttttt 221  Q
    | |||||||||||    
T  37014647 taagattgttttt 37014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 33025578 - 33025696
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttc 189  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||  |||||||  ||||||| |  |  ||||||| || |||||||||||||    
T  33025578 gtcttgtggtattcaaaatcattcaaatttt-gaaggattgtttaatacatcagattttgtgggattttctaataaaattttagcatgaaaaagtctttc 33025676  T
Q  190 atgaaaagatgagatttctt 209  Q
    ||||||| ||||||||||||    
T  33025677 atgaaaacatgagatttctt 33025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 45760216 - 45760004
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| ||||||||| ||||||||| ||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||     
T  45760216 caatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaac 45760117  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||| ||| ||||||| ||||||||||    
T  45760116 tt-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttc 45760018  T
Q  208 ttgagattgttttt 221  Q
    ||  ||||||||||    
T  45760017 ttaggattgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 49198399 - 49198264
Alignment:
Q  95 gtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagt 184  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||||||    
T  49198399 gtggtattcaaaatcattcaaattt-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 49198301  T
Q  185 ctttcatgaaaagatgagatttcttgagattgttttt 221  Q
    |||||||||||| |||| |||||||  ||||||||||    
T  49198300 ctttcatgaaaacatgatatttcttaggattgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 47780705 - 47780916
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | | |||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||| |||||||||||||||||| |    
T  47780705 caatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaat 47780804  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |   ||||||||||||||||||  ||||||||||||||||||||          || |||||||||| |||||||| ||||||||||| |||||||||||    
T  47780805 taa-aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttct 47780903  T
Q  209 tgagattgttttt 221  Q
    | |||||||||||    
T  47780904 taagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 730142 - 730284
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        |||| |||||||||||||||||||||||    
T  730142 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaat 730241  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtg 161  Q
    || ||| | ||||||||||||||  |||||||||||||||||||    
T  730242 tt-cgacgaattgtttaataaatcagattttgatggattttgtg 730284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 47654558 - 47654346
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| ||| |||||||| ||||||||||||| | | || || | ||        |||| |||||||||||||| ||||||||    
T  47654558 caatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaat 47654459  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || ||||||||||||||||||||  |||||||||||||||||||          | | ||||||| || |||||||| ||||||||||| ||||||||||    
T  47654458 tt-cgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttc 47654360  T
Q  208 ttgagattgttttt 221  Q
    ||  ||||||||||    
T  47654359 ttaggattgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 8141334 - 8141284
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8141334 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 8141284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 45535938 - 45536080
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | |||||||||||| || ||||| ||| ||||||||||||||| | || ||   ||       |||| ||||||||||||||||||||||||    
T  45535938 caatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatt 45536037  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | |||| |||||||||||||||  ||||||||||||||||||||    
T  45536038 t-cgaaagattgtttaataaatcagattttgatggattttgtgg 45536080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 49418149 - 49418277
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaa 179  Q
    |||| ||||||||||||||||||||||||| | ||||||||||||||||||  ||||||||||||||||||||          || ||||||| || |||    
T  49418149 gtctagtggtattcaaaatcattcaaattt-caaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaa 49418247  T
Q  180 aaagtctttcatgaaaagatgagatttctt 209  Q
    ||| ||||||||||||| ||||||||||||    
T  49418248 aaaatctttcatgaaaatatgagatttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 162
Target Start/End: Complemental strand, 31572329 - 31572261
Alignment:
Q  93 ttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  31572329 ttgtggtattcaaaatcatttaaattt-cgaaggattgtttaataaatcagattttgatggattttgtgg 31572261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 48524384 - 48524455
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |||||||| |||||||||||||||||||||| ||| |||||||||||||||  | ||||||||||||||||||    
T  48524384 gtcttgtgatattcaaaatcattcaaatttt-gaaagattgtttaataaatcagtttttgatggattttgtgg 48524455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 51085860 - 51085931
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |||| |||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||| |||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaatttt-gaaggattattaaataaattggattttgatgaattttgtgg 51085931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 29556178 - 29556236
Alignment:
Q  99 tattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggatttt 158  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  29556178 tattcaaaatcattcaaattt-cgaaagattgtttaataaattagattttgatggatttt 29556236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 955823 - 955896
Alignment:
Q  98 gtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgtaatttta 172  Q
    |||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||| | ||| |||||||    
T  955823 gtattcaaaatcattcaaattt-cgaagggttgtttaataaatcagattttgatggattttctagtgaaatttta 955896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22183364 - 22183416
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  22183364 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagatt 22183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 47784381 - 47784509
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||  | || |||||||||||| ||||||||||||||| | ||  | ||||       ||||||||||||||||||| ||||||| |    
T  47784381 caatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaa-gtcttgtggtattcaaaattattcaaact 47784479  T
Q  119 ttcgaaggattgtttaataaattggattttg 149  Q
    | | || ||||||||||||||||||||||||    
T  47784480 t-ctaaagattgtttaataaattggattttg 47784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 953813 - 953863
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| ||||||| |||||||    
T  953813 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaaga 953863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28824620 - 28824568
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||||| | |||| |||||||||||| | |||||||||||||||    
T  28824620 caatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagatt 28824568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 31622591 - 31622536
Alignment:
Q  93 ttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttg 149  Q
    |||| ||||||||||||||||||| |||| || ||||||||||||||| ||||||||    
T  31622591 ttgttgtattcaaaatcattcaaa-tttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 49198515 - 49198464
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||||| ||| ||||||||||||||| | |||||||||||||||    
T  49198515 caatcaagactcttt-tcaatttaaaaaagtcttgtgttattcaatcaagatt 49198464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  112 tcaaattttcgaaggattgtttaataaattggattttgatggattttg 159  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  43885203 tcaaatttt-gaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 48524271 - 48524326
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||   |||| |||||||||||| | ||||||||||||||||||    
T  48524271 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 48524326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 15835301 - 15835251
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  15835301 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 15835251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 19452098 - 19452048
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||   |||| |||||||||||| |||||||||||||||    
T  19452098 caatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaaga 19452048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 25612109 - 25612159
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  25612109 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 25612159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 49198474 - 49198429
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 64  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||    
T  49198474 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaat 49198429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 730100 - 730152
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  730100 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 730152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 953771 - 953823
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  953771 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 953823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 14494161 - 14494213
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  14494161 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 14494213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19452056 - 19452004
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  19452056 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19452004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28387641 - 28387589
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||| ||||  |||| |||||||||||  |||||||||||||||||    
T  28387641 caatcaagactttttgcaatttaaaaaaagtcttttggtattcaatcaagatt 28387589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 35679376 - 35679324
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||| ||||||   |||| |||||||||||| |||||||||||||||||    
T  35679376 caatcaaggctcttttcaatttaaaaaaagtcttgtggtattcaatcaagatt 35679324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 52705439 - 52705475
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  52705439 ttttataaaagtcttgtggtattcaatcaagattttt 52705475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 3e-82; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 16362197 - 16362411
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||| ||||||||||||||||||||||||    
T  16362197 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatt 16362296  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  16362297 t-cgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttcttgagattgtt 16362395  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  16362396 tttcttttaaaagtta 16362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 18306166 - 18305952
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  18306166 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18306067  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||| ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18306066 t-cgaaagattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 18305968  T
Q  219 tttattttaaaagtta 234  Q
     || ||||||||||||    
T  18305967 attcttttaaaagtta 18305952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 14782340 - 14782116
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  14782340 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 14782241  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  14782240 tt-gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 14782142  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  14782141 tgagattgtttttattttaaaagtta 14782116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 44726015 - 44725791
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  44726015 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 44725916  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  44725915 tt-gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 44725817  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  44725816 tgagattgtttttattttaaaagtta 44725791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 7466336 - 7466550
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||       |||||||||||||||||||||||||||||    
T  7466336 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatt 7466435  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    || |||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7466436 tt-gaagaattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 7466534  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  7466535 tttcttttaaaagtta 7466550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 32497526 - 32497740
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  32497526 caatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 32497625  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32497626 t-cgaatgattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttcttgagattgtt 32497724  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  32497725 tttcttttaaaagtta 32497740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 42305990 - 42305776
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        |||||||||||||||||| |||||||||    
T  42305990 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaatt 42305891  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  42305890 t-cgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttcttgagattgtt 42305792  T
Q  219 tttattttaaaagtta 234  Q
    ||| |||| |||||||    
T  42305791 tttgtttttaaagtta 42305776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 9288662 - 9288438
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       |||||||||||||||||||||||||||||    
T  9288662 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 9288563  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||||||||||||| |||||||||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  9288562 t-cgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 9288464  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  9288463 tgagattgtttttcttttaaaagtta 9288438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 19718086 - 19717862
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  19718086 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 19717988  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    ||||||| |||||||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||| |||||||||||||||||||    
T  19717987 ttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttct 19717888  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  19717887 tgagattgtttttgttttaaaagtta 19717862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 18958932 - 18958708
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  18958932 caatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 18958834  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||| ||||||||||||          |||||||||||||||||||||||||||||||||||||| |||||| |    
T  18958833 ttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattttt 18958734  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  18958733 tgagattgtttttgttttaaaagtta 18958708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 39467673 - 39467449
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  39467673 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 39467575  T
Q  119 ttcgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||| ||||||||          ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |    
T  39467574 ttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattttt 39467475  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  39467474 tgagattgtttttcttttaaaagtta 39467449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 31623696 - 31623900
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  31623696 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 31623795  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||||||||||||||||          | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  31623796 t-cgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttcttgagattgtt 31623884  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  31623885 tttcttttaaaagtta 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 37857144 - 37857334
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattg 142  Q
    ||||||| |||||||||||||| |||||||||||| | ||       ||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaatttta-aaggattgtttaataaattg 37857242  T
Q  143 gattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 234  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37857243 gattttgatggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 37857334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 10295586 - 10295360
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  10295586 caatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10295487  T
Q  119 ttcgaaggattgtttaataaattggattttgatggatttt-----------gtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    | ||||||||||||||||||||||||||||||||||||||           || ||||||||||||||||||||||||||||||||||||||||||||||    
T  10295486 t-cgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 10295388  T
Q  208 ttgagattgt-ttttattttaaaagtta 234  Q
    |||||||||| |||| ||||||||||||    
T  10295387 ttgagattgtttttttttttaaaagtta 10295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 26856067 - 26856292
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||    
T  26856067 caatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 26856166  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || ||||| ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||  |||| || |||||||    
T  26856167 tt-cgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttc 26856265  T
Q  208 ttgagattgtttttattttaaaagtta 234  Q
    |||||||||||||| ||||||||||||    
T  26856266 ttgagattgtttttcttttaaaagtta 26856292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 4403108 - 4403332
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||| || ||||||||||||| |||||| ||||||||| |||||||||||| | ||        ||| ||||||||||||||||||||||||    
T  4403108 caatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaaatcattcaaatt 4403207  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||||    
T  4403208 t-cgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttct 4403306  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    || |||||||||| ||||||||||||    
T  4403307 tgggattgtttttcttttaaaagtta 4403332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 43166895 - 43166671
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||  |||| |||||||||||| ||||||||||||||| | ||  | ||||       |||||||||||||||||||||||||||||    
T  43166895 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatt 43166796  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||| |||||||||||||||||||||||    
T  43166795 t-cgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttct 43166697  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    |||||||| |||| ||||||||||||    
T  43166696 tgagattggttttcttttaaaagtta 43166671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 4031463 - 4031294
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  4031463 caatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatt 4031364  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagat 199  Q
    | |||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||||||||||||||||    
T  4031363 t-cgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 43959659 - 43959859
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||||| || || | ||       | || ||||||||||||||||||||||||    
T  43959659 caatcaagattctttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatt 43959757  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||| |||||||||||||||  |||||||||||||||||||||| ||||||| || |||||||||||| || |||| ||||||||||||  |||||||    
T  43959758 t-cgaatgattgtttaataaatcagattttgatggattttgtggtgaaattttagcatgaaaaagtctttaattaaaacatgagatttcttatgattgtt 43959856  T
Q  219 ttt 221  Q
    |||    
T  43959857 ttt 43959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 26374635 - 26374424
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  26374635 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 26374536  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  26374535 t-cgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 26374437  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  26374436 taggattgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 24502018 - 24501807
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||| |||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  24502018 caatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 24501919  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  24501918 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 24501820  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  24501819 taggattgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 41479098 - 41479299
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       ||||  |||||||||||||||||||||||    
T  41479098 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatt 41479197  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||| |||||||||||||||  |||||||  ||||||| | ||  ||||||| || |||||| ||||||||||||| ||||||||||||  |||||||    
T  41479198 t-cgaatgattgtttaataaatcagattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgtt 41479296  T
Q  219 ttt 221  Q
    |||    
T  41479297 ttt 41479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 42938322 - 42938111
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  42938322 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 42938223  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| |  |||||||||||||||||||| |||||||||||    
T  42938222 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttct 42938124  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  42938123 taggattgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 2705024 - 2704813
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  2705024 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 2704925  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||| |||||||||||||||   ||||||||||||||||||          |||  |||||| || |||||||||||||||||||| |||||||||||    
T  2704924 t-cgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttct 2704826  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  2704825 taggattgttttt 2704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 10392442 - 10392300
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||| ||||| | ||||||||||||| |||| || | ||       |||| |||||||||| |||||||||||||    
T  10392442 caatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatt 10392343  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | ||||||||||||||||||||  ||||||||||||||||||||    
T  10392342 t-cgaaggattgtttaataaatcagattttgatggattttgtgg 10392300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 39190018 - 39189798
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||  |||| |||||||||||| |||||||||| || | | || || ||||       ||||  || ||||||| ||||||||||||    
T  39190018 caatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacatcattcaaatt 39189920  T
Q  119 ttcgaaggattgtttaataaattg---------gattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 209  Q
    | ||||||||||||||||||||||         |||||||||| ||||| | ||  ||||||||||||||||| ||||||||||||| ||||||||||||    
T  39189919 t-cgaaggattgtttaataaattgaatttgatggattttgatgaattttctagta-aattttaacaagaaaaaatctttcatgaaaacatgagatttctt 39189822  T
Q  210 gagattgtttttattttaaaagtt 233  Q
    | |||||||||| |||||||||||    
T  39189821 gggattgtttttcttttaaaagtt 39189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 42937354 - 42937563
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| |||||||||||  || | || || | ||       |||| ||||||||||||||||||||||||    
T  42937354 caatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 42937451  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| ||  ||||||||||||||||||| |||||||||||    
T  42937452 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttct 42937550  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  42937551 tatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 7507104 - 7506893
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||| ||| || ||||||||| | |||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||| ||||||||||    
T  7507104 caatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaatt 7507005  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || |||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||| ||| |||||||||||    
T  7507004 tt-gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttct 7506906  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  7506905 taggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 5576826 - 5576614
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        |||  |||||||||||||||||||||||    
T  5576826 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaat 5576727  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || ||||| |||||||||||||   |||||||||||||||||||          ||| ||||||| || |||||||||||| ||||||| ||||||||||    
T  5576726 tt-cgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttc 5576628  T
Q  208 ttgagattgttttt 221  Q
    ||  ||||||||||    
T  5576627 ttaggattgttttt 5576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 23115373 - 23115163
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||| |||||| ||||||||||||||| | || || | ||       |||| |||||||||||| |||||||||||    
T  23115373 caatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaatt 23115275  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |  |||||||||||||||||||  ||||||||||||||||||||          || ||||||  || |||||||||||||||||||| |||||||| ||    
T  23115274 tg-gaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattcct 23115176  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  23115175 taggattgttttt 23115163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 42735482 - 42735271
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||| |||||| ||||||| |||| |||||||||| |||| | || || | ||       |||| ||||||||||||||||||||||||    
T  42735482 caatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 42735383  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||| ||||||||||||||  |||||||||||||||||||          ||| ||||||| |  ||||||||||||||| |||| |||||||||||    
T  42735382 t-cgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttct 42735284  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  42735283 taggattgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 32711487 - 32711358
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||| ||| |    
T  32711487 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa-t 32711389  T
Q  119 ttcgaaggattgtttaataaattggattttg 149  Q
    ||||||||||||||||||||||  |||||||    
T  32711388 ttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 8410526 - 8410461
Alignment:
Q  96 tggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    ||||||||||||||||| ||||||  ||||||||||||| ||||||||| |||||||||||||||||    
T  8410526 tggtattcaaaatcattgaaatttg-gaaggattgtttactaaattggactttgatggattttgtgg 8410461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 13478384 - 13478315
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgt 160  Q
    ||||||| |||||||||||| || |||||| ||||||||||||||||||||| ||||| | ||||||||||    
T  13478384 gtcttgtagtattcaaaatcttttaaattt-cgaaggattgtttaataaattagatttcgttggattttgt 13478315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 4950150 - 4950079
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |||||| ||||||||||||||||||| ||| | || |||| ||||||||||| |||||||||||| |||||||    
T  4950150 gtcttggggtattcaaaatcattcaagttt-caaaagattatttaataaattagattttgatggaatttgtgg 4950079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 14782382 - 14782332
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  14782382 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 14782332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 18958974 - 18958924
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  18958974 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 18958924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 19718128 - 19718078
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  19718128 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 19718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 44726057 - 44726007
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  44726057 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 44726007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 14061595 - 14061628
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||| ||||||||||||||||||||    
T  14061595 taaaaaagtcttgtggtattcaatcaagattttt 14061628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 1606051 - 1606015
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  1606051 ttttataaaagtcttgtggtattcaatcaagattttt 1606015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 2112837 - 2112873
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  2112837 ttttataaaagtcttgtggtattcaatcaagattttt 2112873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 4031503 - 4031455
Alignment:
Q  21 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  4031503 atcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 4031455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5576868 - 5576816
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  5576868 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 5576816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 23115415 - 23115363
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  23115415 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 23115363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 29260314 - 29260278
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  29260314 ttttataaaagtcttgtggtattcaatcaagattttt 29260278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32711529 - 32711477
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  32711529 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 32711477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 35142088 - 35142124
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  35142088 ttttaaaaaagtcttgtggtattcaatcaaaattttt 35142124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 38806914 - 38806882
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagatttt 73  Q
    ||||||| |||||||||||||||||||||||||    
T  38806914 taaaaaaatcttgaggtattcaatcaagatttt 38806882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 41386908 - 41386872
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  41386908 ttttataaaagtcttgtggtattcaatcaagattttt 41386872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 42275018 - 42275054
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  42275018 ttttataaaagtcttgtggtattcaatcaagattttt 42275054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 42735524 - 42735472
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  42735524 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 42735472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 42938364 - 42938312
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  42938364 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 42938312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 43605402 - 43605366
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  43605402 ttttataaaagtcttgtggtattcaatcaagattttt 43605366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 43959617 - 43959669
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  43959617 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 43959669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 3e-82; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 23987214 - 23987428
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       |||||||||||||||||||||||||||||    
T  23987214 caatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 23987313  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23987314 t-cgaaggattgtttaataaattagattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 23987412  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  23987413 tttcttttaaaagtta 23987428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 5441404 - 5441628
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  5441404 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 5441502  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  5441503 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 5441602  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  5441603 tgagattgtttttattttaaaagtta 5441628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 27768056 - 27768280
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  27768056 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 27768154  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  27768155 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 27768254  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  27768255 tgagattgtttttattttaaaagtta 27768280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 54341144 - 54341368
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  54341144 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 54341242  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  54341243 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 54341342  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  54341343 tgagattgtttttattttaaaagtta 54341368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 37828608 - 37828388
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||| |    
T  37828608 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 37828510  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||| ||||||||||||||||||||||||||||||||||    
T  37828509 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttct 37828410  T
Q  209 tgagattgtttttattttaaaa 230  Q
    ||||||||||||||||||||||    
T  37828409 tgagattgtttttattttaaaa 37828388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 30967505 - 30967291
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  30967505 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 30967406  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | | |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  30967405 t-caaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttcttgagattgtt 30967307  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  30967306 ttttttttaaaagtta 30967291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 51320921 - 51321145
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  51320921 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 51321020  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||||||||||||||||||||    
T  51321021 t-cgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttct 51321119  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  51321120 tgagattgtttttcttttaaaagtta 51321145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 50018251 - 50018449
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||       |||||||||||||||| ||||||||||||    
T  50018251 caatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaatt 50018350  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    || ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  50018351 tt-gaaggattgtttaataaattgaattttaatggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgagatttattgagattgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 32322092 - 32322315
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||||||||||||||||||||||||||||    
T  32322092 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaattt 32322191  T
Q  120 tcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 209  Q
     |||||||||||||||||||||| |||||||||||||||||||          ||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  32322192 -cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttctt 32322290  T
Q  210 gagattgtttttattttaaaagtta 234  Q
    |||||||||||| |||||| |||||    
T  32322291 gagattgtttttcttttaatagtta 32322315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 49501717 - 49501501
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| | ||       ||||||||| |||||||||||||||||||    
T  49501717 caatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatt 49501618  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttc--atgaaaagatgagatttcttgagattg 216  Q
    | |||| ||||||||||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  49501617 t-cgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgagattg 49501519  T
Q  217 tttttattttaaaagtta 234  Q
    ||||| ||||||||||||    
T  49501518 tttttcttttaaaagtta 49501501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 49507782 - 49507566
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| | ||       ||||||||| |||||||||||||||||||    
T  49507782 caatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatt 49507683  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttc--atgaaaagatgagatttcttgagattg 216  Q
    | |||| ||||||||||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  49507682 t-cgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgagattg 49507584  T
Q  217 tttttattttaaaagtta 234  Q
    ||||| ||||||||||||    
T  49507583 tttttcttttaaaagtta 49507566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 54853674 - 54853450
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| | ||       ||||||||||||||||||| |||||||||    
T  54853674 caatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatt 54853575  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||| |||||||||||||||||||||||||    
T  54853574 t-caaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttct 54853476  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  54853475 tgagattgtttttcttttaaaagtta 54853450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 37915827 - 37916051
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  37915827 caatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37915926  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||||||||||||||||||||||          ||||| |||||||||||||||||| ||||||||||||| |||||| |    
T  37915927 t-cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagatttat 37916025  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  37916026 tgagattgtttttcttttaaaagtta 37916051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 12913229 - 12913437
Alignment:
Q  24 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcga 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||       ||||  ||||||||||||||||||||||||| ||    
T  12913229 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaatttt-ga 12913327  T
Q  124 aggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttat 223  Q
    ||||||||||||||||||||||||||  ||||||| | ||| ||||||||||||||||||| ||||||||| | |||||||||||||  ||| ||||| |    
T  12913328 aggattgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttcttggaattatttttct 12913427  T
Q  224 tttaaaagtt 233  Q
    ||||||||||    
T  12913428 tttaaaagtt 12913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 32684193 - 32683990
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  32684193 caattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaa-gtcttgtggtattcaaaatcattcaaatt 32684095  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||||||||||||||||          | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32684094 t-cgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagattgtt 32684006  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  32684005 tttcttttaaaagtta 32683990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 36479437 - 36479228
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||       |||| |||||||||||||| |||||||||    
T  36479437 caatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaatt 36479338  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | ||||||||| |||||||||||||||||||||||||||| | ||| ||||||| ||| ||||||||||| ||||||| |||||||||||||||||| ||    
T  36479337 t-cgaaggattatttaataaattggattttgatggatttt-tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttcttgagattatt 36479240  T
Q  219 tttattttaaaa 230  Q
    ||| ||||||||    
T  36479239 tttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 49835019 - 49834815
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  49835019 caatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 49834920  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||||||||||||||||          | |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  49834919 t-cgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaagaagtctttcattaaaagatgagatttcttgagattgtt 49834831  T
Q  219 tttattttaaaagtta 234  Q
    ||| | ||||||||||    
T  49834830 tttctattaaaagtta 49834815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 90 - 234
Target Start/End: Original strand, 48261198 - 48261351
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaa 179  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaatttt-gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaa 48261296  T
Q  180 aaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 234  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48261297 aaaatctttcatgaaaatatgagatttcttgagattgtttttattttaaaagtta 48261351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 43 - 230
Target Start/End: Original strand, 28483923 - 28484108
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattg 142  Q
    ||||||||||||||||||||||||||| ||||||| | ||       |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaattt-cgaaggattatttaataaattg 28484021  T
Q  143 gattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 230  Q
    |||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||    
T  28484022 gattttgtaggattttgtagtgtaattt-aacaagaaaaagtctttcatgaaaagacgagatttcttaagattatttttcttttaaaa 28484108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 5799977 - 5800192
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    |||||||||||||||||||||||||||||   |||| |||||  ||||| | ||||||| | ||        ||||||||||||||||||||||||||||    
T  5799977 caatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaat 5800076  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgt 217  Q
    || | |||||||||||||||||||||||||||   |||||||| | ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||    
T  5800077 tt-caaaggattgtttaataaattggattttgtgagattttgtagagtaattttaacaagaaaaagtctttaatgaaaagataagattttttgagattgt 5800175  T
Q  218 ttttattttaaaagtta 234  Q
    |||| ||||||||||||    
T  5800176 ttttcttttaaaagtta 5800192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 29649865 - 29649730
Alignment:
Q  27 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaagg 126  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||| |||| |    
T  29649865 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt-cgaaag 29649767  T
Q  127 attgtttaataaattggattttgatggattttgtggt 163  Q
    |||||||||||||||||||||||||||||||||||||    
T  29649766 attgtttaataaattggattttgatggattttgtggt 29649730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 41725125 - 41725343
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||| |  |       |||||||| ||||||||||||||||||||    
T  41725125 caatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaatcattcaaatt 41725224  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || ||||||||||||||   |||||||||||||| |||||||||          |||||||||||||||||||| |||||||||||||||||||||||||    
T  41725225 tt-gaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttct 41725320  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||   ||| |||||||||||||||||    
T  41725321 tg---ttggttttattttaaaagtta 41725343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 9163076 - 9163218
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |  |       |||||||| ||||||||||||||||||||    
T  9163076 caatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatt 9163175  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | |||||||||||||||||||||  |||||||||||||||||||    
T  9163176 t-cgaaggattgtttaataaattaaattttgatggattttgtgg 9163218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 226
Target Start/End: Complemental strand, 40537351 - 40537150
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| | | || || | ||           ||||||||||||||||||| |||||    
T  40537351 caatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattcaaaatcatttaaatt 40537257  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||| |||||||||||||||  |||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||| ||    
T  40537256 t-cgaatgattgtttaataaatctgattttgatggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattttt 40537158  T
Q  219 tttatttt 226  Q
    ||| ||||    
T  40537157 tttttttt 40537150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 44771060 - 44770917
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggta-ttcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| | ||        |||  ||||||||||||||||||||||    
T  44771060 caatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaatcattcaaat 44770961  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||    
T  44770960 ttt-gaaggattgtttaataaattggattttggtggattttgtgg 44770917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 55302843 - 55303051
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  55302843 caatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 55302942  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  ||||||||||||| |||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  55302943 t-cgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 55303041  T
Q  209 tgagattgtt 218  Q
    | ||||||||    
T  55303042 taagattgtt 55303051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  96 tggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaa 195  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||  ||||||| | ||| || |||| |||||||||||||||||| ||     
T  56445474 tggtattcaaaatcattcaaattt-cgaatgattgtttaataaattggattttgtgggattttctagtgaaactttagcaagaaaaagtctttcataaag 56445376  T
Q  196 agatgagatttcttgagattgttttt 221  Q
    | ||||||||||||||||||||||||    
T  56445375 acatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 1112893 - 1113104
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  1112893 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 1112992  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | | || |||||||||||||||  |||||||||||||||||||          ||  |||||||||| |||||||||||||||||||| |||||||||||    
T  1112993 t-caaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttct 1113091  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  1113092 taggattgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 12112945 - 12113156
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||| | | || || | ||       ||||  |||||||||||||||||||||||    
T  12112945 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatt 12113044  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||| ||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  12113045 t-cgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 12113143  T
Q  209 tgagattgttttt 221  Q
    || ||||||||||    
T  12113144 tgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 25331131 - 25331342
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||| ||||||||||||||||||||    
T  25331131 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatt 25331230  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | | ||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  25331231 t-caaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 25331329  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  25331330 taggattgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 31314933 - 31314737
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||||| |||||||||||| |||||||||||| |||||    |||||| | || || | ||       |||| |||||||||||||||||||||| ||    
T  31314933 aatcaagattctttgtcatttaaaaaaagtcttgtggtat----tcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa-tt 31314839  T
Q  120 tcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttt 219  Q
    |||||||||||||||||||||  |||||||  ||||||| | ||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||    
T  31314838 tcgaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttt 31314739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 41881289 - 41881077
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        || | |||||||||||||||||||||||    
T  41881289 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaat 41881190  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| ||||||||||    
T  41881189 tt-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 41881091  T
Q  208 ttgagattgttttt 221  Q
    ||  ||||||||||    
T  41881090 ttaggattgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 34228789 - 34228578
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| || ||||||||||||| ||| || || | ||       |||| |||||||||||||||||| |||||    
T  34228789 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatt 34228690  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||| |||||||||||||||  |||||||||||||||||| |          || ||||||| || |||||||||||||||||||| |||||||||||    
T  34228689 t-cgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 34228591  T
Q  209 tgagattgttttt 221  Q
    | |||||||||||    
T  34228590 taagattgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 46635848 - 46635643
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       || | || |||||||||||||||||||||    
T  46635848 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatt 46635749  T
Q  119 ttcgaaggattgtttaataaat----tggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 214  Q
    | ||||||||||||||||||||    | |||||||  ||||||| | ||| ||||||| || ||||||||||||||| |||| ||||||||||||  |||    
T  46635748 t-cgaaggattgtttaataaataagattgattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggat 46635650  T
Q  215 tgttttt 221  Q
    |||||||    
T  46635649 tgttttt 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 19741114 - 19740972
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||  |||||||| || |||||||| |||||| |||| || | ||       ||||||||||||| |||||||||||||||    
T  19741114 caatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatt 19741015  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | ||||||||||||||||||||| ||||||||||||||||||||    
T  19741014 t-cgaaggattgtttaataaattagattttgatggattttgtgg 19740972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 32951042 - 32950831
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  32951042 caatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 32950943  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||| ||||||||          ||| ||||||| || |||||| ||||||||||||| |||||||||||    
T  32950942 t-cgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttct 32950844  T
Q  209 tgagattgttttt 221  Q
    | ||||| |||||    
T  32950843 taagatttttttt 32950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 28541698 - 28541840
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||| | ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  28541698 caatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 28541797  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | |||| |||||||||||||||  ||||||||||||||||||||    
T  28541798 t-cgaatgattgtttaataaatcagattttgatggattttgtgg 28541840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 7007374 - 7007585
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||| |||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  7007374 caatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 7007473  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||| ||||||||          ||| ||||||| || |||||  | ||||||||||| |||||||||||    
T  7007474 t-cgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttct 7007572  T
Q  209 tgagattgttttt 221  Q
    | |||||||||||    
T  7007573 taagattgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 221
Target Start/End: Original strand, 42786708 - 42786895
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattg 142  Q
    ||||||||||| ||||||||||||||| | || || ||||       |||| ||||||||||||||||||||||||| ||||||||||||||||||||      
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaattt-cgaaggattgtttaataaatca 42786806  T
Q  143 gattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 221  Q
     ||||||||||||||||||          ||| ||||||| ||  ||||||||||||||||||| ||||||||||||  ||||||||||    
T  42786807 tattttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 39479563 - 39479350
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn--gtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||| || ||||||||| |||||||||||| ||||||||||||||| | || || | ||         | |||||||||||||||||||||||||    
T  39479563 caatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaa 39479464  T
Q  117 ttttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 206  Q
    ||| ||||| ||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||  |||||||||    
T  39479463 ttt-cgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagattt 39479365  T
Q  207 cttgagattgttttt 221  Q
    |||  ||||||||||    
T  39479364 cttaggattgttttt 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 28370924 - 28371066
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||| | |||| || | ||       ||||  |||||||||||||||||||||||    
T  28370924 caatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaatt 28371023  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    ||  |||||||||||||||||||| |||||| || |||||||||    
T  28371024 tta-aaggattgtttaataaattgaattttggtgaattttgtgg 28371066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 39307459 - 39307317
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||| |||||||||||||||||| ||||||||||||||||| ||||| ||||       ||||||||||||||| ||||||||||| |    
T  39307459 caatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaa-t 39307361  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    ||| || |||| |||||| |||||  |||||||| |||||||||    
T  39307360 ttctaaagattatttaatgaattgagttttgatgaattttgtgg 39307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 22202015 - 22202214
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||| ||| |    
T  22202015 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt-aaaat 22202113  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    ||| || |||||||||||||||   ||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| || ||||||||    
T  22202114 ttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttct 22202213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 30009882 - 30009672
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||| | ||||| |||||| ||||||||| || ||||||||||||||| | || || | ||       |||| |||||||||||||||||| ||||||    
T  30009882 aatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattt 30009783  T
Q  120 tcgaaggattgtttaataaattggattttgatggattttgtggtgt----------aattttaacaagaaaaagtctttcatgaaaagatgagatttctt 209  Q
    |  || |||||||||||||||  ||||||||||||||||||||  |          ||||||| || |||||||||||||||||||| ||||||||||||    
T  30009782 ta-aatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 30009684  T
Q  210 gagattgttttt 221  Q
     |||||||||||    
T  30009683 aagattgttttt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 37046658 - 37046445
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||||||| | || || | ||        |||| ||| |||| ||||||||||||||    
T  37046658 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaat 37046559  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtggtgt-----------aattttaacaagaaaaagtctttcatgaaaagatgagattt 206  Q
    || ||||||||||||||||||||  ||||||||||||||||||||  |           ||||||| || |||||||||||||||||||| |||||||||    
T  37046558 tt-cgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagattt 37046460  T
Q  207 cttgagattgttttt 221  Q
    |||  ||||||||||    
T  37046459 cttaggattgttttt 37046445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 25446062 - 25446192
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattg 130  Q
    |||||||||| |||||| ||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||| |||| |||||    
T  25446062 tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt-cgaatgattg 25446160  T
Q  131 tttaataaattggattttgatggattttgtgg 162  Q
    ||||||||||  ||||||||||||||||||||    
T  25446161 tttaataaatcagattttgatggattttgtgg 25446192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 41320881 - 41321021
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaa 179  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||          ||| |||||||  | |||    
T  41320881 gtctagtggtattcaaaatcattcaaattt-cgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaa 41320979  T
Q  180 aaagtctttcatgaaaagatgagatttcttgagattgttttt 221  Q
    |||||||||||| |||| |||||||||||| |||||| ||||    
T  41320980 aaagtctttcataaaaacatgagatttcttaagattgatttt 41321021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 1044809 - 1045006
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || |||||||||  ||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||| ||||||| ||    
T  1044809 caatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactt 1044906  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| || ||||||||    
T  1044907 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttct 1045005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 8711997 - 8712086
Alignment:
Q  141 tggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 230  Q
    |||||||||  ||||||| | ||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  8711997 tggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgtttttcttttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 53275851 - 53275980
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattg 130  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| || | ||       |||| ||| |||| |||||||||||||||| ||||||||||    
T  53275851 tttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaattt-cgaaggattg 53275949  T
Q  131 tttaataaattggattttgatggattttgtg 161  Q
    | ||||||||  |||||||||||||||||||    
T  53275950 tgtaataaatcagattttgatggattttgtg 53275980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 7249900 - 7249829
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  7249900 gtctagtggtattcaaaatcattcaaattt-cgaaggattgtttaataaatcagattttgatggattttgtgg 7249829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 3436670 - 3436792
Alignment:
Q  96 tggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtc 185  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||          ||||||||| ||| |||||||||| ||||||||     
T  3436670 tggtattcaaaatcattcaaattt-cgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtt 3436768  T
Q  186 tttcatgaaaagatgagatttctt 209  Q
    ||||||||||| || |||||||||    
T  3436769 tttcatgaaaacataagatttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 24736447 - 24736546
Alignment:
Q  132 ttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 221  Q
    ||||||||||||||||||||||||||||||          ||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 25504765 - 25504703
Alignment:
Q  99 tattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    ||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  25504765 tattcaaaatcattcaaattt-cgaaggattgtttaataaatcagattttgatggattttgtgg 25504703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 23464955 - 23465097
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || ||||||||| |||||||| |||   ||||||||||||| | || || | ||       |||| ||||||||||||| ||||||||||    
T  23464955 caatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaatt 23465054  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    | ||||||||||||||||||||  || |||||||||||||||||    
T  23465055 t-cgaaggattgtttaataaatcagaatttgatggattttgtgg 23465097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 20021344 - 20021402
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  20021344 caatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcat 20021402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 27454208 - 27454142
Alignment:
Q  95 gtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||||| |||||||||    
T  27454208 gtggtattcaaaatcattcaaatttt-gaaagattatttaataaatcagattttgatgaattttgtgg 27454142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 36728023 - 36727937
Alignment:
Q  142 ggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 229  Q
    ||||||||  ||||||| | ||| ||||||||||||||||| ||||||||| | | ||||||||| |||||||||||||| |||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgttttttttttaaa 36727937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 24131178 - 24131128
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  24131178 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 24131128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 11090428 - 11090520
Alignment:
Q  134 aataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 226  Q
    ||||||||||||||||  ||||||| | ||| ||||||| ||  ||||||||||| || |||| ||||||||||||  |||||||||| ||||    
T  11090428 aataaattggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttctttt 11090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 41581991 - 41581868
Alignment:
Q  22 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttc 121  Q
    |||||||  ||||||||||||||||||||||| |||||||| | |||| ||||| | | ||       |||| |||||||| | | |||||||||||||     
T  41581991 tcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagtcattcaaatttt- 41581893  T
Q  122 gaaggattgtttaataaattggatt 146  Q
    |||  ||||||||||||||||||||    
T  41581892 gaataattgtttaataaattggatt 41581868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 29855682 - 29855728
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 66  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||    
T  29855682 aatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 37915785 - 37915835
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||||| || |||||||||||| |||||||||||||||    
T  37915785 caatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaaga 37915835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 24131090 - 24131046
Alignment:
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||    
T  24131090 tttcgaatgattgtttaataaatcagattttgatggattttgtgg 24131046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 41881331 - 41881279
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   ||||||||||||||||| | |||||||||||||||    
T  41881331 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagatt 41881279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 20021303 - 20021354
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||  |||| |||||||| ||| |||||||||||||||||    
T  20021303 aatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagatt 20021354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 37915743 - 37915798
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||| ||||| | || |||||||||||| ||||||||||||||| ||||    
T  37915743 caatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 5441362 - 5441412
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  5441362 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 5441412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 8711978 - 8712008
Alignment:
Q  132 ttaataaattggattttgatggattttgtgg 162  Q
    |||||||||||||||||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgg 8712008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 11090349 - 11090407
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||| |||||| || || |||||||| ||| ||||||||||||||| |||||||    
T  11090349 caatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcat 11090407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 30967547 - 30967497
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  30967547 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 30967497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 8584044 - 8584007
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  8584044 attttataaaagtcttgtggtattcaatcaagattttt 8584007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 1044768 - 1044819
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||  || ||||||||||||||| | |||||||||||||||    
T  1044768 caatcaagactctttc-caatttaaaaaagtcttgtgttattcaatcaagatt 1044819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19741156 - 19741104
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  19741156 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19741104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 20021424 - 20021471
Alignment:
Q  110 attcaaattttcgaaggattgtttaataaattggattttgatggatttt 158  Q
    |||||||||||  ||||||||||||||||||| ||||||| ||||||||    
T  20021424 attcaaatttta-aaggattgtttaataaattagattttgctggatttt 20021471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22201973 - 22202025
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  22201973 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 22202025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 24131220 - 24131168
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  24131220 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 24131168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 25331089 - 25331141
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  25331089 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 25331141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 25504887 - 25504835
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  25504887 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 25504835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 28541656 - 28541708
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  28541656 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 28541708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32951084 - 32951032
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  32951084 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 32951032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37046700 - 37046648
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  37046700 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 37046648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 39479605 - 39479553
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  39479605 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 39479553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 41320788 - 41320828
Alignment:
Q  29 tctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||| |||||| |||||||||||| |||||||||||||||    
T  41320788 tctttatcatttaaaaaaagtcttgtggtattcaatcaaga 41320828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 44929923 - 44929959
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  44929923 ttttataaaagtcttgtggtattcaatcaagattttt 44929959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 3e-79; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 31895696 - 31895920
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||       ||||||||||||||||||||||||||| |    
T  31895696 caatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaa-t 31895794  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  31895795 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 31895894  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||    
T  31895895 tgagattgtttttattttaaaagtta 31895920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 14262638 - 14262414
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||| ||| |    
T  14262638 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaa-t 14262540  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||| |||||||    
T  14262539 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggatttct 14262440  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  14262439 tgagattgtttttcttttaaaagtta 14262414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 30385262 - 30385054
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| | ||       |||||||||||||||||||||||||||||    
T  30385262 caatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 30385163  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||    
T  30385162 t-cgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaacaaa--gtctttcatgaaaagatgagatttcttgagattgtt 30385066  T
Q  219 tttattttaaaa 230  Q
    ||| ||||||||    
T  30385065 tttcttttaaaa 30385054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 34773409 - 34773608
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        ||||||||||||||||||||||||||||    
T  34773409 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 34773508  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | |||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  34773509 t-cgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 34773607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 34759256 - 34759031
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||    
T  34759256 caatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 34759157  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||| ||||||||||||||||||||||||    
T  34759156 ttcc-aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttc 34759058  T
Q  208 ttgagattgtttttattttaaaagtta 234  Q
    |||||||| ||||| ||||||||||||    
T  34759057 ttgagattatttttcttttaaaagtta 34759031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 93 - 234
Target Start/End: Original strand, 31067567 - 31067707
Alignment:
Q  93 ttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatg 192  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||     
T  31067567 ttgtggtattcaaaatcattcaaattt-cgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcata 31067665  T
Q  193 aaaagatgagatttcttgagattgtttttattttaaaagtta 234  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  31067666 aaaagatgagatttcttgagattgtttttattttaaaagtta 31067707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 234
Target Start/End: Original strand, 7497099 - 7497299
Alignment:
Q  42 aaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaatt 141  Q
    |||||||||||| ||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  7497099 aaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt-cgaaggagtgtttaataaatt 7497197  T
Q  142 ggattttgatggattttgtgg---------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagt 232  Q
    |||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  7497198 ggattttgatggattttgtggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattatttttcttttaaaagt 7497297  T
Q  233 ta 234  Q
    ||    
T  7497298 ta 7497299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 4200534 - 4200418
Alignment:
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4200534 tttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgt 4200435  T
Q  218 ttttattttaaaagtta 234  Q
    |||||||||||||||||    
T  4200434 ttttattttaaaagtta 4200418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 6197683 - 6197472
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  6197683 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 6197584  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  6197583 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 6197485  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  6197484 taggattgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 21 - 160
Target Start/End: Original strand, 7051847 - 7051985
Alignment:
Q  21 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatttt 120  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||| | ||||| | ||       ||| |||| |||||||||||||||||||||     
T  7051847 atcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaattt- 7051945  T
Q  121 cgaaggattgtttaataaattggattttgatggattttgt 160  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7051946 cgaaggattgtttaataaattggattttgatggattttgt 7051985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 2300943 - 2300744
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       ||||  ||||||| |||||||||||||||    
T  2300943 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatt 2300844  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||||||||||    
T  2300843 t-cgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 2300745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 1391624 - 1391835
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || ||||||||| || ||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  1391624 caatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 1391723  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |  |||||||||||||||||||  |||||||||||||||||||          ||| ||||||  || |||||||||||||||||||| |||||||| ||    
T  1391724 tg-gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattcct 1391822  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  1391823 taggattgttttt 1391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 29076598 - 29076737
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| ||||| || || | ||        |||| || ||||||||||||||||||||    
T  29076598 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaat 29076697  T
Q  118 tttcgaaggattgtttaataaattggattttgatggatttt 158  Q
    || ||||||||||||||||||||  ||||||||||||||||    
T  29076698 tt-cgaaggattgtttaataaatcagattttgatggatttt 29076737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 28002665 - 28002806
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||  ||||||||||||||| | || || | ||       |||| ||| ||||||||||||||||||||    
T  28002665 caatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatt 28002764  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg 161  Q
    |  |||||||||||||||||||  |||||||||||||||||||    
T  28002765 tg-gaaggattgtttaataaatcagattttgatggattttgtg 28002806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 29111571 - 29111711
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn--gtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| ||||| || || | ||         |||| || |||||||||||||||||||    
T  29111571 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaatcattcaaa 29111670  T
Q  117 ttttcgaaggattgtttaataaattggattttgatggatttt 158  Q
    ||| ||||||||||||||||||||  ||||||||||||||||    
T  29111671 ttt-cgaaggattgtttaataaatcagattttgatggatttt 29111711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 3848284 - 3848348
Alignment:
Q  93 ttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttg 159  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||||||| |||||| |||||||||    
T  3848284 ttgtggtattcaaaatcatttaaatttt-gaatgattgtttaataaattgaattttg-tggattttg 3848348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 656966 - 657066
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||| ||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||| ||||||||||||||    
T  656966 caatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaatt 657064  T
Q  119 tt 120  Q
    ||    
T  657065 tt 657066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 2238678 - 2238722
Alignment:
Q  177 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 221  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  2238678 gaaaaaatctttcatgaaaacatgagatttcttaagattgttttt 2238722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 31895654 - 31895704
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  31895654 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 31895704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 34773367 - 34773417
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  34773367 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 34773417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 1391582 - 1391634
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  1391582 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 1391634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 2300985 - 2300933
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  2300985 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 2300933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 6197725 - 6197673
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  6197725 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 6197673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 13883 - 14097
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  13883 caatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 13982  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | | || ||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13983 t-caaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 14081  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  14082 tttcttttaaaagtta 14097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 143; Significance: 4e-75; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 21444 - 21230
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  21444 caatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 21345  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    | | || ||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21344 t-caaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 21246  T
Q  219 tttattttaaaagtta 234  Q
    ||| ||||||||||||    
T  21245 tttcttttaaaagtta 21230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 28463 - 28567
Alignment:
Q  131 tttaataaattggattttgatggattttg-tggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 229  Q
    ||||||||||||||||||||||||||||| | |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28463 tttaataaattggattttgatggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 28562  T
Q  230 agtta 234  Q
    |||||    
T  28563 agtta 28567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 10561 - 10785
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||        ||||||||||||||||||||||||||||    
T  10561 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 10660  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | | |||||||||||||||||||| ||||||||||||||| |||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  10661 t-caaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 10759  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  10760 tgagattgtttttgttttaaaagtta 10785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 10519 - 10569
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  10519 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 10569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 39823 - 39599
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| | ||       ||| ||||||||||||||||||||||| |    
T  39823 caatcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaact 39724  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||| ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||| ||||||||    
T  39723 t-cgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttct 39625  T
Q  209 tgagattgtttttattttaaaagtta 234  Q
    ||||||||||||| ||||||||||||    
T  39624 tgagattgtttttcttttaaaagtta 39599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 4201 - 4337
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  4201 caatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 4300  T
Q  119 ttcgaaggattgtttaataaattggattttgatggatt 156  Q
    || |||||||||||||||||||||||||||||||||||    
T  4301 tt-gaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 864 - 1075
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| | ||        ||||||||||||||||||||||||||||    
T  864 caatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaat 963  T
Q  118 tttcgaaggattgtttaataaat---------tggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    || ||||| ||| ||||||||||         |||||||||  ||||||||| ||||||||||||| |||||||||||||||| |||| |||||||||||    
T  964 tt-cgaagaattatttaataaatagattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgagatttct 1062  T
Q  209 tgagattgttttt 221  Q
    |||||||||||||    
T  1063 tgagattgttttt 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 58282 - 58058
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-tttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||| |||| ||  |||||||||||||| |||||||| |||||| |||||||| | ||       ||  ||||||||||||||||||||||||    
T  58282 caatcaagactttttg-caacttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaatcattcaaat 58184  T
Q  118 tttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 207  Q
    || |||| |||||||||||||||||||||||||||||||||||||          | |||||||||||||| ||| ||||||||||||||||||||||||    
T  58183 tt-cgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgagatttc 58085  T
Q  208 ttgagattgtttttattttaaaagtta 234  Q
    |||||||||||||| ||||||||||||    
T  58084 ttgagattgtttttcttttaaaagtta 58058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 14878 - 14985
Alignment:
Q  127 attgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 226  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  14878 attgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttctttt 14977  T
Q  227 aaaagtta 234  Q
    ||||||||    
T  14978 aaaagtta 14985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 37042 - 36905
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaa 179  Q
    |||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||          |||||||||||||||||    
T  37042 gtcttgaggtattcaaaatcattaaaattt-cgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaa 36944  T
Q  180 aaagtctttcatgaaaagatgagatttcttgagattgtt 218  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  36943 aaagtctttcatgaaaagataagatttcttgagattgtt 36905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 37071 - 37027
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37071 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 15239 - 15028
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  15239 caatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 15140  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||| ||||||    
T  15139 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttct 15041  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  15040 taggattgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 15281 - 15229
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  15281 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 15229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 15882 - 15671
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  15882 caatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 15783  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | ||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| |||| ||||||    
T  15782 t-cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttct 15684  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  15683 taggattgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 15924 - 15872
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  15924 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 15872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 100212 - 100411
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| |||| |||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  100212 caatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 100311  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    | | ||||||||||||||||||   ||||||||||||||||||          ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  100312 t-caaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttct 100410  T

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Target: scaffold0004 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 102094 - 102307
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaag--tcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||| |||||||||||| |||||||  ||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||    
T  102094 caatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 102193  T
Q  117 ttttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 206  Q
    ||| |||| |||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||||||||||||| |||| |||||||||    
T  102194 ttt-cgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagattt 102292  T
Q  207 cttgagattgttttt 221  Q
    |||  ||||||||||    
T  102293 cttatgattgttttt 102307  T

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Target: scaffold0839 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 3798 - 3674
Alignment:
Q  120 tcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 209  Q
    ||||| |||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||| ||||||| | |||| ||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatatttttt 3699  T
Q  210 gagattgtttttattttaaaagtta 234  Q
    |||||||||||| ||||||||||||    
T  3698 gagattgtttttcttttaaaagtta 3674  T

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Target: scaffold0151 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 43 - 221
Target Start/End: Complemental strand, 38786 - 38600
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttcgaaggattgtttaataaattg 142  Q
    ||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||||||| ||||||||||||||||||| |||      
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa-tttcgaaggattgtttaat-aatca 38689  T
Q  143 gattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 221  Q
    |||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  38688 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 38600  T

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Target: scaffold0113 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 39101 - 38890
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||| |||||| |||||||||||| |||||||||| |||| | || || | ||       |||| ||| ||||||||||||||||||||    
T  39101 caatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatt 39002  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 208  Q
    |  |||||||||||||||||||  |||||||||||||||||||          ||| ||||||  || |||||||||||||||||||| |||||||| ||    
T  39001 tg-gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattcct 38903  T
Q  209 tgagattgttttt 221  Q
    |  ||||||||||    
T  38902 taggattgttttt 38890  T

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Target: scaffold0276 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 745 - 603
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||||| | | || || | ||        | | ||||||||||||||||||||||||    
T  745 caatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatt 646  T
Q  119 ttcgaaggattgtttaataaattggattttgatggattttgtgg 162  Q
    |  |||||||||||||||||||   |||||||||||||||||||    
T  645 tg-gaaggattgtttaataaatcatattttgatggattttgtgg 603  T

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Target: scaffold0276; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 787 - 735
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  787 caatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagatt 735  T

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Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 233738 - 233795
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 76  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  233738 caatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 233795  T

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Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 234586 - 234643
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 76  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  234586 caatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 234643  T

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Target: scaffold0010; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 222570 - 222627
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 76  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  222570 caatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 222627  T

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Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 199905 - 199967
Alignment:
Q  98 gtattcaaaatcattcaaattttcgaaggattgtttaataaattggattttgatggattttgtg 161  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||| |||||||| |||||||||    
T  199905 gtatttaaaatcattcaaatttt-gaaagagtgtttaataaattgaattttgattgattttgtg 199967  T

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Target: scaffold0202 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 16582 - 16546
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| |||||| |||||||||||||    
T  16582 ttttaaaaaagtcttgtggtatttaatcaagattttt 16546  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 81820 - 81784
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  81820 ttttataaaagtcttgtggtattcaatcaagattttt 81784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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