View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12548_low_10 (Length: 239)
Name: NF12548_low_10
Description: NF12548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12548_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 14 - 224
Target Start/End: Original strand, 8781996 - 8782206
Alignment:
| Q |
14 |
atgaagactcttaaaaactcaaaatagaggaggagaataattttttattaaaaaagttgtttcttgcagtgcagaaaataaattataggggtttggtacc |
113 |
Q |
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| T |
8781996 |
atgaagactcttaaaaactcaaaatagaagaggagaataattttttattaaaaaagttgtttcttgcagtgcagaaaataaattataggggtttggtacc |
8782095 |
T |
|
| Q |
114 |
tataaatttataaaattttattctgggtgcctctaaatttgttcatcaaacagttgtcattgaaataattttagataagacatctgattcctattttcaa |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||| || |
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| T |
8782096 |
tataaatttataaaattttattctgggtgcctctaaatttgttcatcaaacagtggtgattgaaataattttagataagacatctgattcttatttttaa |
8782195 |
T |
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| Q |
214 |
gtttgttcatg |
224 |
Q |
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||||||||||| |
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| T |
8782196 |
gtttgttcatg |
8782206 |
T |
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