View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12549_high_7 (Length: 240)
Name: NF12549_high_7
Description: NF12549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12549_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 10 - 224
Target Start/End: Original strand, 14130474 - 14130688
Alignment:
| Q |
10 |
ctctaccatactttgattaagagaggaccactttgcactctgatattagacatgtttttaaaatatgaaaatggccttatatgttcttttcttcaccatt |
109 |
Q |
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| T |
14130474 |
ctctaccatactttgattaggagaggaccactttccactctgatattagacatgtttttaaaatatgaaaatggccttatatgttcttttcttcaccatt |
14130573 |
T |
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| Q |
110 |
gcaacgacaaaaaatgtagaagagcataagataaaagagcctgataaaacaaatctagaagaccaagaattctttattgactttcatacnnnnnnnntaa |
209 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
14130574 |
gcaacgacaataaatgtagaagagcataagataaaagagcctgataaaacaaatctagaagaccaagaattctttattgactttcatacaaaaaaaataa |
14130673 |
T |
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| Q |
210 |
aaggaggtgcaagtg |
224 |
Q |
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||||||||||||||| |
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| T |
14130674 |
aaggaggtgcaagtg |
14130688 |
T |
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