View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1254_high_44 (Length: 334)
Name: NF1254_high_44
Description: NF1254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1254_high_44 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 94 - 334
Target Start/End: Complemental strand, 45641798 - 45641553
Alignment:
| Q |
94 |
aagtagaggttcctgaatgtcaaggattccaattttcatccacctctttcaaaccaacagctgatcaagcagttctcaccctttcatattttaaccacaa |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641798 |
aagtagaggttcctgaatgtcaaggattccaattttcatccacctctttcaaaccaacagctgatcaagcagttctcaccctttcatattttaaccacaa |
45641699 |
T |
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| Q |
194 |
cttaatggaccacattgctctaaatgaaaatgacaacagatattctcactatgagtttctctacatgttctgatgctattct-----tgcccctcaacta |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
45641698 |
cttaatggaccacattgctctaaatgaaaatgacaacagatattctcactatgagtttctctacatgttctgatgctattcttgccttgcccctcaacta |
45641599 |
T |
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| Q |
289 |
aaccattttcattgaacatcccataaattcaccgcaagtgttctct |
334 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641598 |
aaccattttcattgaacatcccataaattcaccgcaagtgttctct |
45641553 |
T |
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