View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1254_low_36 (Length: 416)
Name: NF1254_low_36
Description: NF1254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1254_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 86 - 342
Target Start/End: Complemental strand, 6358243 - 6357987
Alignment:
| Q |
86 |
ttcttcagtaaaaatatttatgtcttgccattgtaatatttaagtgtacaatattagtcatatgtacatacatcagcagcttaattttttatttggctgg |
185 |
Q |
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| T |
6358243 |
ttcttcagtaaaaatatttatgtcttgccattgtaatatttaagtgtacaatattagtcatatgtgcatacatcagcagcttaattttttatttggctgg |
6358144 |
T |
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| Q |
186 |
tgtgtggtaatattaactatcttccaactaaatatgttctgcaacgtcgaggtgttaagatttctgttggaattgcaatatacatgttccaacaatttct |
285 |
Q |
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| T |
6358143 |
tgtgtggtaatattaactatcttccaactaaatatgttctgcaacgtcgaggtgttaagatttctgttggaattgcaatatacatgttccaacaatttct |
6358044 |
T |
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| Q |
286 |
tctaccttccgttatgtgttggtgacatcgaaactaatattcatttcctattgcttt |
342 |
Q |
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| T |
6358043 |
tctaccttccgttatgtgttggtgacatcgaaactaatattcatttcctattgcttt |
6357987 |
T |
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