View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1254_low_41 (Length: 398)

Name: NF1254_low_41
Description: NF1254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1254_low_41
NF1254_low_41
[»] chr8 (47 HSPs)
chr8 (84-395)||(44094126-44094437)
chr8 (214-395)||(44086014-44086195)
chr8 (214-395)||(44069007-44069188)
chr8 (29-87)||(44498185-44498243)
chr8 (29-88)||(39571200-39571259)
chr8 (29-87)||(7785776-7785834)
chr8 (29-86)||(54611-54668)
chr8 (29-86)||(2890161-2890218)
chr8 (29-85)||(6552729-6552785)
chr8 (29-89)||(12763650-12763710)
chr8 (29-85)||(33289261-33289317)
chr8 (29-88)||(32211360-32211419)
chr8 (29-87)||(7805697-7805755)
chr8 (29-86)||(25600999-25601056)
chr8 (29-86)||(43199353-43199410)
chr8 (29-85)||(3304278-3304334)
chr8 (29-89)||(7012245-7012305)
chr8 (29-89)||(15888348-15888408)
chr8 (29-89)||(32114471-32114531)
chr8 (29-79)||(12343146-12343196)
chr8 (29-79)||(31654687-31654737)
chr8 (29-70)||(13578931-13578972)
chr8 (31-79)||(28463617-28463665)
chr8 (26-77)||(15688038-15688089)
chr8 (31-85)||(8587170-8587224)
chr8 (29-79)||(8587244-8587294)
chr8 (26-70)||(17006982-17007026)
chr8 (26-70)||(17570221-17570265)
chr8 (28-79)||(17006917-17006968)
chr8 (28-79)||(17570279-17570330)
chr8 (28-87)||(27422263-27422322)
chr8 (39-89)||(4245665-4245715)
chr8 (28-78)||(24691986-24692036)
chr8 (39-85)||(31654613-31654659)
chr8 (27-88)||(24692050-24692111)
chr8 (39-79)||(54696-54736)
chr8 (39-79)||(2890246-2890286)
chr8 (39-79)||(3304362-3304402)
chr8 (39-79)||(6552661-6552701)
chr8 (39-79)||(7785862-7785902)
chr8 (39-79)||(7805783-7805823)
chr8 (39-79)||(12343224-12343264)
chr8 (39-79)||(15888436-15888476)
chr8 (32-84)||(30171483-30171535)
chr8 (39-79)||(32114559-32114599)
chr8 (39-79)||(43199438-43199478)
chr8 (39-79)||(44498271-44498311)
[»] chr5 (24 HSPs)
chr5 (29-86)||(37642028-37642085)
chr5 (29-89)||(41989403-41989463)
chr5 (29-87)||(9395424-9395482)
chr5 (29-87)||(13103098-13103156)
chr5 (29-86)||(17025698-17025755)
chr5 (29-86)||(36563537-36563594)
chr5 (29-85)||(6126898-6126954)
chr5 (29-87)||(13033125-13033183)
chr5 (29-79)||(23360016-23360066)
chr5 (29-86)||(11795242-11795299)
chr5 (29-86)||(21576020-21576077)
chr5 (29-85)||(37148955-37149011)
chr5 (29-87)||(26350348-26350406)
chr5 (29-85)||(20848148-20848203)
chr5 (29-79)||(4444034-4444084)
chr5 (39-79)||(20848080-20848120)
chr5 (41-79)||(37641959-37641997)
chr5 (36-85)||(11574161-11574210)
chr5 (29-65)||(583063-583099)
chr5 (29-73)||(9006894-9006938)
chr5 (39-79)||(9395356-9395396)
chr5 (39-79)||(13033057-13033097)
chr5 (39-79)||(13103030-13103070)
chr5 (39-79)||(37149039-37149079)
[»] chr4 (39 HSPs)
chr4 (29-86)||(53337444-53337501)
chr4 (31-87)||(5986952-5987008)
chr4 (29-87)||(3422134-3422192)
chr4 (28-85)||(51894582-51894639)
chr4 (29-85)||(6121893-6121949)
chr4 (29-85)||(47833685-47833741)
chr4 (29-87)||(33621870-33621928)
chr4 (29-87)||(41469764-41469822)
chr4 (29-87)||(47838615-47838673)
chr4 (29-87)||(48336337-48336395)
chr4 (29-86)||(3993050-3993107)
chr4 (29-85)||(3372195-3372251)
chr4 (29-85)||(20538686-20538742)
chr4 (29-85)||(42797806-42797862)
chr4 (29-85)||(46797799-46797855)
chr4 (31-86)||(3904682-3904737)
chr4 (31-86)||(17236864-17236919)
chr4 (29-79)||(7579384-7579434)
chr4 (29-79)||(43900623-43900673)
chr4 (29-86)||(24704444-24704501)
chr4 (29-86)||(52756749-52756806)
chr4 (26-85)||(4780366-4780425)
chr4 (30-79)||(45478167-45478216)
chr4 (30-89)||(40913185-40913244)
chr4 (39-89)||(43900545-43900595)
chr4 (26-85)||(1716301-1716360)
chr4 (26-85)||(38160372-38160431)
chr4 (31-78)||(41615683-41615730)
chr4 (30-88)||(17344288-17344346)
chr4 (31-85)||(41594654-41594708)
chr4 (28-85)||(44900080-44900137)
chr4 (39-79)||(3372127-3372167)
chr4 (39-79)||(3992982-3993022)
chr4 (39-79)||(20538770-20538810)
chr4 (39-79)||(24704376-24704416)
chr4 (39-79)||(33551207-33551247)
chr4 (39-79)||(47833617-47833657)
chr4 (39-79)||(48336269-48336309)
chr4 (39-79)||(53337376-53337416)
[»] chr6 (33 HSPs)
chr6 (29-89)||(8099604-8099664)
chr6 (29-88)||(9644770-9644829)
chr6 (29-88)||(9650787-9650846)
chr6 (29-88)||(33052791-33052850)
chr6 (29-87)||(26602397-26602455)
chr6 (29-86)||(6330189-6330246)
chr6 (29-86)||(11572144-11572201)
chr6 (29-86)||(13853592-13853649)
chr6 (29-85)||(2830409-2830465)
chr6 (29-85)||(8382969-8383025)
chr6 (29-86)||(6068640-6068697)
chr6 (29-85)||(8417793-8417849)
chr6 (29-79)||(35031007-35031057)
chr6 (29-74)||(28747145-28747190)
chr6 (29-78)||(6143628-6143677)
chr6 (29-86)||(22896536-22896593)
chr6 (29-85)||(17992062-17992118)
chr6 (26-77)||(8186438-8186489)
chr6 (31-86)||(3788113-3788168)
chr6 (31-73)||(7596989-7597031)
chr6 (26-88)||(8186366-8186428)
chr6 (29-66)||(33393165-33393202)
chr6 (39-79)||(2830341-2830381)
chr6 (57-85)||(6045680-6045708)
chr6 (39-79)||(6068572-6068612)
chr6 (39-79)||(6330121-6330161)
chr6 (39-79)||(8099536-8099576)
chr6 (39-79)||(8383053-8383093)
chr6 (39-79)||(11572229-11572269)
chr6 (31-75)||(14936533-14936577)
chr6 (39-79)||(26602329-26602369)
chr6 (31-79)||(31849586-31849634)
chr6 (39-79)||(33052878-33052918)
[»] chr3 (47 HSPs)
chr3 (29-89)||(40690992-40691052)
chr3 (29-88)||(10298053-10298112)
chr3 (29-86)||(49823380-49823437)
chr3 (29-89)||(17653786-17653846)
chr3 (29-85)||(19557052-19557108)
chr3 (29-85)||(34080030-34080086)
chr3 (29-85)||(48340471-48340527)
chr3 (29-87)||(8817384-8817442)
chr3 (29-79)||(9111500-9111550)
chr3 (29-79)||(37508995-37509045)
chr3 (29-79)||(42507361-42507411)
chr3 (29-86)||(8437499-8437556)
chr3 (29-78)||(22722005-22722054)
chr3 (29-86)||(46208104-46208161)
chr3 (29-86)||(51406747-51406804)
chr3 (29-85)||(2787832-2787888)
chr3 (29-85)||(21295326-21295382)
chr3 (29-85)||(38964466-38964522)
chr3 (28-75)||(42170356-42170403)
chr3 (29-79)||(4238668-4238718)
chr3 (29-79)||(44785402-44785452)
chr3 (29-89)||(36095676-36095736)
chr3 (39-85)||(6013336-6013382)
chr3 (30-88)||(9027139-9027197)
chr3 (29-86)||(33942931-33942988)
chr3 (28-92)||(9213509-9213573)
chr3 (28-85)||(2131745-2131802)
chr3 (39-87)||(2787916-2787964)
chr3 (39-79)||(8437431-8437471)
chr3 (29-85)||(35513547-35513603)
chr3 (31-86)||(33128205-33128260)
chr3 (39-86)||(46208029-46208076)
chr3 (39-85)||(17653712-17653758)
chr3 (28-86)||(34988074-34988132)
chr3 (39-85)||(37508921-37508967)
chr3 (39-88)||(44785480-44785529)
chr3 (57-86)||(45010871-45010900)
chr3 (39-79)||(4238600-4238640)
chr3 (39-79)||(10297985-10298025)
chr3 (60-88)||(12747821-12747849)
chr3 (39-79)||(19557136-19557176)
chr3 (39-79)||(21295410-21295450)
chr3 (39-79)||(22721937-22721977)
chr3 (39-79)||(34080114-34080154)
chr3 (29-85)||(34988149-34988205)
chr3 (26-70)||(48729610-48729654)
chr3 (39-79)||(49823465-49823505)
[»] chr2 (36 HSPs)
chr2 (29-89)||(37990009-37990069)
chr2 (29-88)||(3055632-3055691)
chr2 (29-87)||(6648517-6648575)
chr2 (29-87)||(9047753-9047811)
chr2 (29-87)||(41478637-41478695)
chr2 (29-86)||(38917521-38917578)
chr2 (29-86)||(44398760-44398817)
chr2 (29-85)||(12337937-12337993)
chr2 (29-85)||(13197710-13197766)
chr2 (29-85)||(15372300-15372356)
chr2 (29-85)||(15896916-15896972)
chr2 (29-87)||(16243781-16243839)
chr2 (29-87)||(37666608-37666666)
chr2 (29-87)||(41492894-41492952)
chr2 (29-86)||(13344558-13344615)
chr2 (29-86)||(30099181-30099238)
chr2 (29-86)||(44397621-44397678)
chr2 (29-85)||(16044317-16044373)
chr2 (29-79)||(44804584-44804634)
chr2 (29-83)||(20900666-20900720)
chr2 (31-85)||(31150653-31150707)
chr2 (39-89)||(41478723-41478773)
chr2 (29-86)||(30852691-30852748)
chr2 (39-79)||(3055564-3055604)
chr2 (39-79)||(4684016-4684056)
chr2 (39-79)||(13197794-13197834)
chr2 (39-87)||(15372224-15372272)
chr2 (39-79)||(15896848-15896888)
chr2 (39-79)||(16044401-16044441)
chr2 (26-70)||(31951402-31951446)
chr2 (39-79)||(37666694-37666734)
chr2 (39-79)||(37990097-37990137)
chr2 (39-79)||(38917606-38917646)
chr2 (58-86)||(40430788-40430816)
chr2 (39-79)||(44397553-44397593)
chr2 (39-79)||(44398692-44398732)
[»] chr7 (40 HSPs)
chr7 (29-87)||(1738445-1738503)
chr7 (29-79)||(4790322-4790372)
chr7 (29-87)||(7240823-7240881)
chr7 (29-87)||(7482299-7482357)
chr7 (29-86)||(9268830-9268887)
chr7 (29-86)||(28536750-28536807)
chr7 (29-85)||(22285773-22285829)
chr7 (29-85)||(46840934-46840990)
chr7 (29-79)||(33418450-33418500)
chr7 (29-87)||(36583469-36583527)
chr7 (29-87)||(38063911-38063969)
chr7 (29-79)||(38441534-38441584)
chr7 (29-85)||(94318-94374)
chr7 (29-85)||(23314139-23314195)
chr7 (29-85)||(31319399-31319455)
chr7 (29-75)||(36016206-36016252)
chr7 (29-86)||(1565728-1565785)
chr7 (29-86)||(7661150-7661207)
chr7 (39-87)||(22285697-22285745)
chr7 (39-85)||(94402-94448)
chr7 (28-78)||(7269412-7269462)
chr7 (32-86)||(7661075-7661129)
chr7 (34-76)||(28411051-28411093)
chr7 (39-85)||(36016280-36016326)
chr7 (32-78)||(40840126-40840172)
chr7 (39-88)||(1565813-1565862)
chr7 (29-78)||(29993251-29993300)
chr7 (39-88)||(46840857-46840906)
chr7 (39-79)||(1738531-1738571)
chr7 (39-79)||(7240755-7240795)
chr7 (29-85)||(7269479-7269535)
chr7 (39-79)||(7482231-7482271)
chr7 (29-85)||(9575483-9575539)
chr7 (39-79)||(23314223-23314263)
chr7 (39-79)||(28536835-28536875)
chr7 (39-79)||(31319483-31319523)
chr7 (26-70)||(36033241-36033285)
chr7 (39-79)||(36583401-36583441)
chr7 (39-79)||(38063997-38064037)
chr7 (30-78)||(46877665-46877713)
[»] chr1 (38 HSPs)
chr1 (29-87)||(14984911-14984969)
chr1 (29-86)||(25694393-25694450)
chr1 (29-89)||(1050962-1051022)
chr1 (29-85)||(11796007-11796063)
chr1 (31-87)||(12483626-12483682)
chr1 (29-85)||(27159358-27159414)
chr1 (29-85)||(31842795-31842851)
chr1 (29-85)||(39401966-39402022)
chr1 (29-85)||(44668093-44668149)
chr1 (29-85)||(47777481-47777537)
chr1 (29-88)||(34042770-34042829)
chr1 (29-79)||(9981721-9981771)
chr1 (30-88)||(11897129-11897187)
chr1 (29-86)||(47216698-47216755)
chr1 (29-85)||(26471065-26471121)
chr1 (28-86)||(16448181-16448239)
chr1 (29-79)||(44955212-44955262)
chr1 (29-86)||(17556827-17556884)
chr1 (27-86)||(11897053-11897112)
chr1 (29-87)||(47588335-47588393)
chr1 (29-87)||(47969769-47969827)
chr1 (31-87)||(5392222-5392278)
chr1 (27-87)||(21537941-21538001)
chr1 (31-85)||(11989857-11989911)
chr1 (39-88)||(14984834-14984883)
chr1 (29-65)||(23278021-23278057)
chr1 (28-87)||(44953061-44953120)
chr1 (28-86)||(37552214-37552272)
chr1 (39-88)||(11795930-11795979)
chr1 (39-79)||(1050894-1050934)
chr1 (39-79)||(9981653-9981693)
chr1 (39-79)||(12483712-12483752)
chr1 (39-79)||(26471149-26471189)
chr1 (39-79)||(27159442-27159482)
chr1 (39-79)||(31842879-31842919)
chr1 (39-79)||(39402050-39402090)
chr1 (39-79)||(44668177-44668217)
chr1 (39-79)||(47216783-47216823)
[»] scaffold0482 (2 HSPs)
scaffold0482 (29-87)||(12934-12992)
scaffold0482 (39-79)||(12866-12906)
[»] scaffold0464 (2 HSPs)
scaffold0464 (29-87)||(6129-6187)
scaffold0464 (39-79)||(6215-6255)
[»] scaffold0204 (2 HSPs)
scaffold0204 (29-87)||(23859-23917)
scaffold0204 (39-79)||(23791-23831)
[»] scaffold0009 (2 HSPs)
scaffold0009 (31-85)||(49581-49635)
scaffold0009 (39-89)||(49501-49551)
[»] scaffold1707 (1 HSPs)
scaffold1707 (29-73)||(1409-1453)
[»] scaffold0011 (1 HSPs)
scaffold0011 (35-88)||(231300-231353)


Alignment Details
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 84 - 395
Target Start/End: Original strand, 44094126 - 44094437
Alignment:
Q  84 tattttctagtgttcacttaattcaaagtgttttaatattactactattactgttattgttacgtactgttccattgatcatatgatttctcccatgcat 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44094126 tattttctagtgttcacttaattcaaagtgttttaatattactactattactgttattgttacgtactattccattgatcatatgatttctcccatgcat 44094225  T
Q  184 atagaatatagatatatcatatatgaatagatgagtgattaaggattgattaacttaccaaaagtagctgaacgaaaagtagtagaaccatctatagcat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44094226 atagaatatagatatatcatatatgaatagatgagtgattaaggattgattaacttaccaaaagtagctgaacgaaaagtagtagaaccatctatagcat 44094325  T
Q  284 tatgattgccagtaacaatagtagaatccattccatctccgaatatcattaaattcttcactgtcttcttgatatcaacattctctctataaacgcctgc 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||    
T  44094326 tatgattgccagtaacaatagtagaatccattccatctccgaatatcattaaattcttcactgtcttcttgatatcaacattctctttataaatacctgc 44094425  T
Q  384 tttcacatgaat 395  Q
    ||||| ||||||    
T  44094426 tttcagatgaat 44094437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 214 - 395
Target Start/End: Complemental strand, 44086195 - 44086014
Alignment:
Q  214 atgagtgattaaggattgattaacttaccaaaagtagctgaacgaaaagtagtagaaccatctatagcattatgattgccagtaacaatagtagaatcca 313  Q
    ||||||||||||  |||||  |||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  44086195 atgagtgattaactattgaagaacttaccgaaagtagctgaacgaaatgtggtagaaccatctatagcattttgattaccagtaacaatagtagaatcca 44086096  T
Q  314 ttccatctccgaatatcattaaattcttcactgtcttcttgatatcaacattctctctataaacgcctgctttcacatgaat 395  Q
    |||||||||| ||||||||||||||   || |||| | |||||||| | ||||||| ||||||| |||||||||| ||||||    
T  44086095 ttccatctccaaatatcattaaatttgacattgtccttttgatatcgatattctctttataaacacctgctttcagatgaat 44086014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 214 - 395
Target Start/End: Original strand, 44069007 - 44069188
Alignment:
Q  214 atgagtgattaaggattgattaacttaccaaaagtagctgaacgaaaagtagtagaaccatctatagcattatgattgccagtaacaatagtagaatcca 313  Q
    ||||||||||||  |||||  |||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  44069007 atgagtgattaactattgaagaacttaccgaaagtagctgaacgaaatgtggtagaaccatctatagcattttgattaccagtaacactagtagaatcca 44069106  T
Q  314 ttccatctccgaatatcattaaattcttcactgtcttcttgatatcaacattctctctataaacgcctgctttcacatgaat 395  Q
    |||||||||| ||||||||||||||   ||||||  | |||||||||| ||||||| ||||||  |||||||||| ||||||    
T  44069107 ttccatctccaaatatcattaaatttgacactgtgcttttgatatcaatattctctttataaatacctgctttcagatgaat 44069188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 44498243 - 44498185
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44498243 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtatt 44498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 39571259 - 39571200
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  39571259 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 39571200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 7785834 - 7785776
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  7785834 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 54668 - 54611
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  54668 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 2890218 - 2890161
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  2890218 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 6552729 - 6552785
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  6552729 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 12763710 - 12763650
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  12763710 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtatttt 12763650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 33289317 - 33289261
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  33289317 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 32211419 - 32211360
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  32211419 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattt 32211360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 7805755 - 7805697
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||    
T  7805755 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtatt 7805697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 25601056 - 25600999
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  25601056 agatacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 43199410 - 43199353
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  43199410 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 3304334 - 3304278
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  3304334 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 7012245 - 7012305
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||    
T  7012245 agatacatcaacttttgttgatccaaaattctcttataaataggaccggaggaagtatttt 7012305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 15888408 - 15888348
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||    
T  15888408 agatacatcaacttttgttgacccaaaattctcttataaatagaactggagggagtatttt 15888348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 32114531 - 32114471
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  32114531 agatacatcaatttttgttgacccaaaattttcttataaataggaccggagggagtatttt 32114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 12343196 - 12343146
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  12343196 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 31654687 - 31654737
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31654687 agatacatcaacttttgttgacccaaaattcttttataaataggaccggag 31654737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 13578931 - 13578972
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaata 70  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  13578931 agatacatcaacttttgttgacccaaaattctcttataaata 13578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 28463665 - 28463617
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggaccggag 28463617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 15688089 - 15688038
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaataggaccgg 77  Q
    ||||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  15688089 atcagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 15688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 8587224 - 8587170
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||||||| |||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 8587244 - 8587294
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||||||||| |||  |||||||||||||| ||||||||    
T  8587244 agatacatcaacttttattgactcaagtttctcttataaataagaccggag 8587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 17006982 - 17007026
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaata 70  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||    
T  17006982 atcagatacatcaacttttattgactaaaatttctcttataaata 17007026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 17570265 - 17570221
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaata 70  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||    
T  17570265 atcagatacatcaacttttattgactaaaatttctcttataaata 17570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 17006968 - 17006917
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    ||||| ||||||||||| |||||||||  ||||||||||||||||| |||||    
T  17006968 cagatccatcaacttttgttgacccaactttctcttataaataggatcggag 17006917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 17570279 - 17570330
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    ||||| ||||||||||| |||||||||  ||||||||||||||||| |||||    
T  17570279 cagatccatcaacttttgttgacccaactttctcttataaataggatcggag 17570330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 27422263 - 27422322
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||  | |||| |||||||||| |||||||||||||||||||| || |||||||    
T  27422263 cagatacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtatt 27422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 4245665 - 4245715
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||| |||||| ||| |||||||||||||||||||||||  ||||||||    
T  4245665 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 4245715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 24692036 - 24691986
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccgga 78  Q
    |||||| |||||||||| |||||||||| |||| ||| |||||||||||||    
T  24692036 cagatatatcaacttttgttgacccaaatttcttttaaaaataggaccgga 24691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 31654659 - 31654613
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||| |||||| ||| ||||||||||||||||||||||| |||||    
T  31654659 acttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 24692050 - 24692111
Alignment:
Q  27 tcagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||||||||||||||| |||||| ||  || |||||||||||||| || || ||||||||    
T  24692050 tcagatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtattt 24692111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 54696 - 54736
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  54696 acttttgttgacctaaatttctcttataaataggaccggag 54736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 2890246 - 2890286
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  2890246 acttttgttgacctaaatttctcttataaataggaccggag 2890286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 3304362 - 3304402
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  3304362 acttttgttgacctaaatttctcttataaataggaccggag 3304402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 6552701 - 6552661
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  6552701 acttttgttgacctaaatttctcttataaataggaccggag 6552661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 7785862 - 7785902
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  7785862 acttttgttgacctaaatttctcttataaataggaccggag 7785902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 7805783 - 7805823
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  7805783 acttttgttgacctaaatttctcttataaataggaccggag 7805823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 12343224 - 12343264
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  12343224 acttttgttgacctaaatttctcttataaataggaccggag 12343264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 15888436 - 15888476
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  15888436 acttttgttgacctaaatttctcttataaataggaccggag 15888476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 30171535 - 30171483
Alignment:
Q  32 tacatcaacttttattgacccaaaattctcttataaataggaccggagagagt 84  Q
    ||||| ||||||| ||||| |||||||||||| ||||||||| ||||| ||||    
T  30171535 tacattaacttttgttgactcaaaattctcttgtaaataggatcggagggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 32114559 - 32114599
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  32114559 acttttgttgacctaaatttctcttataaataggaccggag 32114599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 43199438 - 43199478
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  43199438 acttttgttgacctaaatttctcttataaataggaccggag 43199478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 44498271 - 44498311
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  44498271 acttttgttgacctaaatttctcttataaataggaccggag 44498311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 7e-22; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 37642028 - 37642085
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37642028 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 41989463 - 41989403
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  41989463 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttt 41989403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 9395424 - 9395482
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  9395424 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 13103098 - 13103156
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13103098 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 17025698 - 17025755
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  17025698 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 36563594 - 36563537
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  36563594 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 6126898 - 6126954
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  6126898 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 13033125 - 13033183
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  13033125 agatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatt 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 23360016 - 23360066
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23360016 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 23360066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 11795242 - 11795299
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  11795242 agatacatcaacttttgttgacccaaaattctcttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 21576020 - 21576077
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  21576020 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 37149011 - 37148955
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  37149011 agatacatcaacttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 26350406 - 26350348
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||||| |||||||    
T  26350406 agatacatcaacttttattgattcaaaattcttttataaataggaccggagggagtatt 26350348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 20848148 - 20848203
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||||||| |||||    
T  20848148 agatacatcaatttttgttg-cccaaaattctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 4444034 - 4444084
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| |||| | |||||||||||||||||| ||||||||    
T  4444034 agatacatcaacttttgttgatctaaaattctcttataaataagaccggag 4444084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 20848120 - 20848080
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  20848120 acttttattgacctaaatttctcttataaataggaccggag 20848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 37641997 - 37641959
Alignment:
Q  41 ttttattgacccaaaattctcttataaataggaccggag 79  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  37641997 ttttattgacctaaatttctcttataaataggaccggag 37641959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 11574161 - 11574210
Alignment:
Q  36 tcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||| |||| |||||| |||  ||||||||||||||||||||||||||||    
T  11574161 tcaatttttgttgacctaaatgtctcttataaataggaccggagagagta 11574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 583063 - 583099
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttat 65  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  583063 agatacatcaacttttgttgacccaaaattcttttat 583099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 9006938 - 9006894
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaatagga 73  Q
    |||||||||||||||| |||||| |||| ||| ||||||||||||    
T  9006938 agatacatcaacttttgttgacctaaaagtctgttataaatagga 9006894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 9395396 - 9395356
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  9395396 acttttgttgacctaaatttctcttataaataggaccggag 9395356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 13033097 - 13033057
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  13033097 acttttgttgacctaaatttctcttataaataggaccggag 13033057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 13103070 - 13103030
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  13103070 acttttgttgacctaaatttctcttataaataggaccggag 13103030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 37149039 - 37149079
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  37149039 acttttgttgacctaaatttctcttataaataggaccggag 37149079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 53337444 - 53337501
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  53337444 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 5986952 - 5987008
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5986952 atacatcaacttttgttgacccaaaattctcttataaataggaccggagagagtatt 5987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 3422134 - 3422192
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  3422134 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 51894639 - 51894582
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  51894639 cagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 6121949 - 6121893
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  6121949 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 47833685 - 47833741
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  47833685 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 33621870 - 33621928
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  33621870 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtatt 33621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 41469822 - 41469764
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  41469822 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 47838673 - 47838615
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  47838673 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 48336337 - 48336395
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  48336337 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 48336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 3993050 - 3993107
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  3993050 agatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 3372195 - 3372251
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  3372195 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 20538742 - 20538686
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  20538742 agatacatcaaattttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 42797806 - 42797862
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  42797806 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 46797799 - 46797855
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  46797799 agatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 3904737 - 3904682
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  3904737 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 17236864 - 17236919
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccggagagagtat 17236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 7579384 - 7579434
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  7579384 agatacatcaacttttgttgacccaaaattctcttataaatagaaccggag 7579434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 43900623 - 43900673
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||    
T  43900623 agatacatcaacttttgttaacccaaaattctcttataaataggaccggag 43900673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 24704444 - 24704501
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  24704444 agatacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 52756749 - 52756806
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||    
T  52756749 agatacatcaacttttgttgacccaaaattcttttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 4780366 - 4780425
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||| |||||    
T  4780366 atcagatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 45478167 - 45478216
Alignment:
Q  30 gatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||||||||||| | ||||||||||||||||| |||||    
T  45478167 gatacatcaacttttattgacccacatttctcttataaataggatcggag 45478216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 40913244 - 40913185
Alignment:
Q  30 gatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||| |||||||||| |||| ||||| ||||||||||||||||||||||| |||| ||||    
T  40913244 gatatatcaacttttgttgatccaaatttctcttataaataggaccggagggagtttttt 40913185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 43900595 - 43900545
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||| |||||| ||| ||||||||||||||||||||||| |||||||||    
T  43900595 acttttgttgacctaaatttctcttataaataggaccggagggagtatttt 43900545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 1716360 - 1716301
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||||||||||||| |||||| ||   ||||||||||||| |||||||| |||||    
T  1716360 atcagatacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 38160431 - 38160372
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||| |||| |||||| |||  ||||||||||||| ||| ||||||||||    
T  38160431 atcagatacatcaatttttgttgacctaaatctctcttataaatatgactggagagagta 38160372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 41615730 - 41615683
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccgga 78  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  41615730 atacatcaacttttgttgatccaattttctcttataaataggaccgga 41615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 17344288 - 17344346
Alignment:
Q  30 gatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    ||||||||||||||| |||| ||||| |||||||||||||| ||  |||| ||||||||    
T  17344288 gatacatcaacttttgttgatccaaatttctcttataaataagattggagggagtattt 17344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 41594708 - 41594654
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||| |||||||||  ||||||||||  | |||||||||||||||    
T  41594708 atacatcaacttttgttgacccaactttctcttatatgtgggaccggagagagta 41594654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 44900137 - 44900080
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||| |||||||||| ||||||  ||  |||||||||||||||||||||| |||||    
T  44900137 cagatatatcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 3372167 - 3372127
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  3372167 acttttgttgacctaaatttctcttataaataggaccggag 3372127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 3993022 - 3992982
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  3993022 acttttgttgaccgaaatttctcttataaataggaccggag 3992982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 20538770 - 20538810
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  20538770 acttttgttgacctaaatttctcttataaataggaccggag 20538810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 24704416 - 24704376
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  24704416 acttttgttgacctaaatttctcttataaataggaccggag 24704376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 33551247 - 33551207
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  33551247 acttttgttgacctaaatttctcttataaataggaccggag 33551207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 47833657 - 47833617
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  47833657 acttttgttgacctaaatttctcttataaataggaccggag 47833617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 48336309 - 48336269
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  48336309 acttttgttgacctaaatttctcttataaataggaccggag 48336269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 53337416 - 53337376
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  53337416 acttttgttgacctaaatttctcttataaataggaccggag 53337376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 8099604 - 8099664
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  8099604 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttt 8099664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 9644770 - 9644829
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  9644770 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 9650787 - 9650846
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  9650787 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 33052850 - 33052791
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  33052850 agatacatcaacttttattgacccaaaattctcttataaataggaccggatggagtattt 33052791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 26602397 - 26602455
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  26602397 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 6330189 - 6330246
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  6330189 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 11572201 - 11572144
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  11572201 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 13853649 - 13853592
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  13853649 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 2830409 - 2830465
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  2830409 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 8383025 - 8382969
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  8383025 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 6068640 - 6068697
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  6068640 agatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 8417849 - 8417793
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||    
T  8417849 agatacatcaacttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 35031057 - 35031007
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  35031057 agatacatcaatttttgttgacccaaaattctcttataaataggaccggag 35031007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 28747190 - 28747145
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggac 74  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  28747190 agatacatcaacttttgttgacccaaaattctcttataaataggac 28747145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 6143628 - 6143677
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccgga 78  Q
    |||||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  6143628 agatacatcaacttttgttgtcccaaaattctcttataaatagaaccgga 6143677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 22896536 - 22896593
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||||| | ||||||    
T  22896536 agatacatcaacttttgttgacaaaaaattctcttataaataggaccggcgggagtat 22896593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 17992062 - 17992118
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||| || |||||    
T  17992062 agatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 8186438 - 8186489
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaataggaccgg 77  Q
    ||||||||||||||||||| |||| ||||| |||| ||||||||||||||||    
T  8186438 atcagatacatcaacttttgttgatccaaatttcttttataaataggaccgg 8186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 3788113 - 3788168
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||| |||||| ||| || ||||||||||| |||||||| ||||||    
T  3788113 atacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 7597031 - 7596989
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaatagga 73  Q
    |||||||||||||||||||| |||| ||||| |||||||||||    
T  7597031 atacatcaacttttattgactcaaatttctcctataaatagga 7596989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 8186428 - 8186366
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||| |||||||||||||||||||||||||  |||||| || |||||| |||||  |||||||    
T  8186428 atcaaatacatcaacttttattgacccaaatgtctcttgtatataggagcggaggaagtattt 8186366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 33393202 - 33393165
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttata 66  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  33393202 agatacatcaacttttattgactcaaatttctcttata 33393165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 2830381 - 2830341
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  2830381 acttttgttgacctaaatttctcttataaataggaccggag 2830341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 85
Target Start/End: Complemental strand, 6045708 - 6045680
Alignment:
Q  57 ttctcttataaataggaccggagagagta 85  Q
    |||||||||||||||||||||||||||||    
T  6045708 ttctcttataaataggaccggagagagta 6045680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 6068612 - 6068572
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  6068612 acttttattgacctaaatttttcttataaataggaccggag 6068572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 6330161 - 6330121
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  6330161 acttttgttgacctaaatttctcttataaataggaccggag 6330121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 8099576 - 8099536
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  8099576 acttttgttgacctaaatttctcttataaataggaccggag 8099536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 8383053 - 8383093
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  8383053 acttttgttgacctaaatttctcttataaataggaccggag 8383093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 11572229 - 11572269
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  11572229 acttttgttgacctaaatttctcttataaataggaccggag 11572269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 14936533 - 14936577
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggacc 75  Q
    ||||||||||| || ||||||||||  ||||||||||||||||||    
T  14936533 atacatcaactattgttgacccaaatatctcttataaataggacc 14936577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 26602369 - 26602329
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  26602369 acttttgttgacctaaatttctcttataaataggaccggag 26602329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 31849634 - 31849586
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||| |||||||| |  ||||||||||||| ||||||||    
T  31849634 atacatcaacttttgttgacccatatgtctcttataaatatgaccggag 31849586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 33052878 - 33052918
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  33052878 acttttgttgacctaaatttctcttataaataggaccggag 33052918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 40691052 - 40690992
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  40691052 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttt 40690992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 10298053 - 10298112
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  10298053 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 49823437 - 49823380
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  49823437 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 17653786 - 17653846
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  17653786 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttt 17653846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 19557108 - 19557052
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  19557108 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 34080086 - 34080030
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  34080086 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 48340471 - 48340527
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  48340471 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 8817442 - 8817384
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  8817442 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaaggagtatt 8817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 9111550 - 9111500
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9111550 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 9111500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 37508995 - 37509045
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37508995 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 37509045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 42507411 - 42507361
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42507411 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 42507361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 8437499 - 8437556
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  8437499 agatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 22722005 - 22722054
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccgga 78  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22722005 agatacatcaacttttgttgacccaaaattctcttataaataggaccgga 22722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 46208104 - 46208161
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  46208104 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 51406747 - 51406804
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  51406747 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 2787888 - 2787832
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  2787888 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 21295382 - 21295326
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  21295382 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 38964466 - 38964522
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  38964466 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 42170403 - 42170356
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggacc 75  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42170403 cagatacatcaacttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 4238668 - 4238718
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  4238668 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggag 4238718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 44785452 - 44785402
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  44785452 agatacatcaacttttgttgacccaaaattctcttataaatagaaccggag 44785402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 36095736 - 36095676
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||||||||||||| |||| ||||||||||||| |||||| |||||||| |||||||||    
T  36095736 agatacatcaacttttgttgatccaaaattctcttgtaaataagaccggagtgagtatttt 36095676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6013382 - 6013336
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 9027197 - 9027139
Alignment:
Q  30 gatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    ||||||||||||||| |||||||||  || |||||||||||||||||||| ||||||||    
T  9027197 gatacatcaacttttgttgacccaactttatcttataaataggaccggagggagtattt 9027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 33942988 - 33942931
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||  ||||||||||||||||| ||| ||||||||    
T  33942988 agatacatcaacttttgttgacccaagtttctcttataaataggatcggcgagagtat 33942931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 9213573 - 9213509
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattttcta 92  Q
    ||||||||||||||||| |||||  |||  ||| |||||||||||||||||| ||||||||||||    
T  9213573 cagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagtattttcta 9213509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 2131745 - 2131802
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||||||||||| ||||||||||  ||||| |||| ||||||||||| |||||    
T  2131745 cagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 2787916 - 2787964
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  2787916 acttttgttgacctaaatttctcttataaataggaccggagatagtatt 2787964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 8437471 - 8437431
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  8437471 acttttattgacctaaatttctcttataaataggaccggag 8437431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 35513547 - 35513603
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||| |||||||||| ||| |||||| |||||||||||| ||||| |||||    
T  35513547 agatacatcaccttttattgatccagaattcttttataaataggatcggagggagta 35513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 33128260 - 33128205
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||| ||||||| |||||| ||| ||||||||||| |||||| |||||||||||    
T  33128260 atacattaacttttgttgacctaaatttctcttataattaggactggagagagtat 33128205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 46208076 - 46208029
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||| |||||| ||| ||||||||||||||||||||||| ||||||    
T  46208076 acttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 17653758 - 17653712
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||| |||||| ||| ||||||||||||||||||||||| |||||    
T  17653758 acttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 34988132 - 34988074
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||| |||||||||| ||||||||||  ||||| ||||||||||||| || ||||||    
T  34988132 cagatagatcaacttttgttgacccaaatgtctctaataaataggaccgaagggagtat 34988074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 37508967 - 37508921
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||| |||||| ||| ||||||||||||||||||||||| |||||    
T  37508967 acttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 44785480 - 44785529
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||| |||||| ||| |||||||||||||||||||||||  |||||||    
T  44785480 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 86
Target Start/End: Original strand, 45010871 - 45010900
Alignment:
Q  57 ttctcttataaataggaccggagagagtat 86  Q
    ||||||||||||||||||||||||||||||    
T  45010871 ttctcttataaataggaccggagagagtat 45010900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 4238640 - 4238600
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  4238640 acttttgttgacctaaatttctcttataaataggaccggag 4238600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 10298025 - 10297985
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  10298025 acttttgttgacctaaatttctcttataaataggaccggag 10297985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 12747821 - 12747849
Alignment:
Q  60 tcttataaataggaccggagagagtattt 88  Q
    |||||||||||||||||||||||||||||    
T  12747821 tcttataaataggaccggagagagtattt 12747849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 19557136 - 19557176
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  19557136 acttttgttgacctaaatttctcttataaataggaccggag 19557176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 21295410 - 21295450
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  21295410 acttttgttgacctaaatttctcttataaataggaccggag 21295450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 22721977 - 22721937
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  22721977 acttttgttgacctaaatttctcttataaataggaccggag 22721937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 34080114 - 34080154
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  34080114 acttttgttgacctaaatttctcttataaataggaccggag 34080154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 34988149 - 34988205
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||||||| || ||||| ||||  | |||||||||||||||||||| |||||    
T  34988149 agatacatcaactattgttgactcaaatatttcttataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 48729610 - 48729654
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaata 70  Q
    |||||||||||||||||||||| || ||||  |||||||||||||    
T  48729610 atcagatacatcaacttttattaactcaaatgtctcttataaata 48729654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 49823465 - 49823505
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  49823465 acttttgttgacctaaatttctcttataaataggaccggag 49823505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 37990069 - 37990009
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  37990069 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttt 37990009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 3055632 - 3055691
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  3055632 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 3055691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 6648575 - 6648517
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  6648575 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 9047811 - 9047753
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  9047811 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 41478695 - 41478637
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  41478695 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 38917578 - 38917521
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  38917578 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 44398760 - 44398817
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  44398760 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 12337993 - 12337937
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  12337993 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 13197766 - 13197710
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  13197766 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 15372300 - 15372356
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  15372300 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 15896916 - 15896972
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  15896916 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 16243839 - 16243781
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  16243839 agatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagtatt 16243781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 37666666 - 37666608
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  37666666 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtatt 37666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 41492952 - 41492894
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  41492952 agatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 13344558 - 13344615
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  13344558 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 30099238 - 30099181
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  30099238 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 44397621 - 44397678
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  44397621 agatacatcaacttttgttgacccaaaattctcttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 16044373 - 16044317
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| |||||    
T  16044373 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 44804634 - 44804584
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| || ||  |||||||||||||||||||||||||||    
T  44804634 agatacatcaacttttgttaacttaaaattctcttataaataggaccggag 44804584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 20900720 - 20900666
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagag 83  Q
    ||||||||||||||||  |||||||||  |||||||||||||| ||| |||||||    
T  20900720 agatacatcaacttttgctgacccaaatgtctcttataaatagaaccagagagag 20900666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 31150707 - 31150653
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||| ||||||| ||||| |||  ||||||||||||||||| |||||||||||    
T  31150707 atacataaacttttgttgacgcaactttctcttataaataggatcggagagagta 31150653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 41478723 - 41478773
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||| |||||| ||| |||||||||||||||||||||||  ||||||||    
T  41478723 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 41478773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 30852691 - 30852748
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||| |||||||||| | | ||  ||||||||||||||||||||||| ||||||    
T  30852691 agatacataaacttttattaatctaactttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 3055604 - 3055564
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  3055604 acttttgttgacctaaatttctcttataaataggaccggag 3055564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 4684016 - 4684056
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  4684016 acttttgttgacctaaatttctcttataaataggaccggag 4684056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 13197794 - 13197834
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  13197794 acttttgttgacctaaatttctcttataaataggaccggag 13197834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 15372272 - 15372224
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||| |||||| ||| |||||||||||||||||| |||| |||||||    
T  15372272 acttttgttgacctaaatttctcttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 15896888 - 15896848
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  15896888 acttttgttgacctaaatttctcttataaataggaccggag 15896848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 16044401 - 16044441
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  16044401 acttttgttgacctaaatttctcttataaataggaccggag 16044441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 31951446 - 31951402
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaata 70  Q
    |||||||||||||| ||||||||||| |||  |||||||||||||    
T  31951446 atcagatacatcaaattttattgaccaaaatatctcttataaata 31951402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 37666694 - 37666734
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  37666694 acttttgttgacctaaatttctcttataaataggaccggag 37666734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 37990097 - 37990137
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  37990097 acttttgttgacctaaatttctcttataaataggaccggag 37990137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 38917606 - 38917646
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  38917606 acttttattgacctaaatttatcttataaataggaccggag 38917646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 86
Target Start/End: Original strand, 40430788 - 40430816
Alignment:
Q  58 tctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||||||||||||||||    
T  40430788 tctcttataaataggaccggagagagtat 40430816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 44397593 - 44397553
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  44397593 acttttgttgacctaaatttctcttataaataggaccggag 44397553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 44398732 - 44398692
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  44398732 acttttgttgacctaaatttctcttataaataggaccggag 44398692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 1738503 - 1738445
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  1738503 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 4790322 - 4790372
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4790322 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 4790372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 7240823 - 7240881
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  7240823 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 7482299 - 7482357
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  7482299 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 9268830 - 9268887
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  9268830 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 28536807 - 28536750
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  28536807 agatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 28536750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 22285773 - 22285829
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  22285773 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 46840934 - 46840990
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  46840934 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 33418450 - 33418500
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33418450 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 36583469 - 36583527
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  36583469 agatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 38063969 - 38063911
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||    
T  38063969 agatacatcaacttttgttgacccaaaattctcttataaataggaccagagggagtatt 38063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 38441534 - 38441584
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38441534 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 38441584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 94374 - 94318
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||    
T  94374 agatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 23314195 - 23314139
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  23314195 agatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 31319455 - 31319399
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  31319455 agatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 36016252 - 36016206
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggacc 75  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  36016252 agatacatcaacttttgttgacccaaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 1565785 - 1565728
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| || ||||||    
T  1565785 agatacatcaacttttgttgacccaaaattctcttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 7661150 - 7661207
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| ||||||||||  |||| ||||||||||||| ||| ||||||    
T  7661150 agatacatcaacttttgttgacccaaatgtctcatataaataggaccagagggagtat 7661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 22285745 - 22285697
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||| |||||| ||| ||||||||||||||||||||||| |||||||    
T  22285745 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 94402 - 94448
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  94402 acttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 7269462 - 7269412
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccgga 78  Q
    ||||| ||||||||||| || ||||||  ||||||||||||||||||||||    
T  7269462 cagatgcatcaacttttgttaacccaactttctcttataaataggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 7661129 - 7661075
Alignment:
Q  32 tacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||||||  ||| ||||||||||||||||| || || ||||||    
T  7661129 tacatcaacttttattgacataaatttctcttataaataggatcgaagggagtat 7661075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 28411051 - 28411093
Alignment:
Q  34 catcaacttttattgacccaaaattctcttataaataggaccg 76  Q
    ||||||||||||||||||| || ||| ||||||||||||||||    
T  28411051 catcaacttttattgacccgaatttcccttataaataggaccg 28411093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 36016280 - 36016326
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||| |||||| ||| ||||||||||||||||||||||| |||||    
T  36016280 acttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 40840172 - 40840126
Alignment:
Q  32 tacatcaacttttattgacccaaaattctcttataaataggaccgga 78  Q
    ||||||||||||| |||||  ||| ||||||||||||||||||||||    
T  40840172 tacatcaacttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 1565813 - 1565862
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||| |||||| ||| |||||||||||||||||||||||  |||||||    
T  1565813 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 29993300 - 29993251
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccgga 78  Q
    ||||| || ||||||| ||||||||| ||||||||| |||||||||||||    
T  29993300 agatatattaacttttgttgacccaacattctcttacaaataggaccgga 29993251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 46840906 - 46840857
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||| |||||| ||| |||||||||||||||||||||||  |||||||    
T  46840906 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 46840857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 1738531 - 1738571
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  1738531 acttttgttgacctaaatttctcttataaataggaccggag 1738571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 7240795 - 7240755
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  7240795 acttttgttgacctaaatttctcttataaataggaccggag 7240755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 7269479 - 7269535
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||||| |||| |||||||||  || ||||||||||| |||||||| |||||    
T  7269479 agatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 7482271 - 7482231
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  7482271 acttttgttgacctaaatttctcttataaataggaccggag 7482231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 9575483 - 9575539
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||||| |||| |||||| ||  |||||||||||||||||||| || |||||    
T  9575483 agatacatcaagttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 23314223 - 23314263
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  23314223 acttttgttgacctaaatttctcttataaataggaccggag 23314263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 28536835 - 28536875
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  28536835 acttttgttgacctaaatttctcttataaataggaccggag 28536875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 31319483 - 31319523
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  31319483 acttttgttgacctaaatttctcttataaataggaccggag 31319523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 36033285 - 36033241
Alignment:
Q  26 atcagatacatcaacttttattgacccaaaattctcttataaata 70  Q
    ||||||||||||||||||| |||||| ||| || |||||||||||    
T  36033285 atcagatacatcaacttttgttgacctaaatttatcttataaata 36033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 36583441 - 36583401
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  36583441 acttttgttgacctaaatttctcttataaataggaccggag 36583401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 38063997 - 38064037
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  38063997 acttttgttgacctaaatttctcttataaataggaccggag 38064037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 46877665 - 46877713
Alignment:
Q  30 gatacatcaacttttattgacccaaaattctcttataaataggaccgga 78  Q
    ||||||| ||||||| |||||||||  |||||||||| |||||||||||    
T  46877665 gatacattaacttttgttgacccaactttctcttatatataggaccgga 46877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 14984911 - 14984969
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  14984911 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 25694393 - 25694450
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  25694393 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 1050962 - 1051022
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  1050962 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtatttt 1051022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 11796007 - 11796063
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  11796007 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 12483682 - 12483626
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  12483682 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 27159414 - 27159358
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  27159414 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 31842851 - 31842795
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  31842851 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 39402022 - 39401966
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  39402022 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 44668149 - 44668093
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  44668149 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 47777537 - 47777481
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  47777537 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 34042770 - 34042829
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||    
T  34042770 agatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 9981721 - 9981771
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9981721 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 9981771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 11897129 - 11897187
Alignment:
Q  30 gatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  11897129 gatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtattt 11897187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 47216755 - 47216698
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  47216755 agatacatcaacttttgttgacccaaaattctcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 26471121 - 26471065
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  26471121 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 16448181 - 16448239
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||| ||||||    
T  16448181 cagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 44955262 - 44955212
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  44955262 agatacatcaacttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 17556827 - 17556884
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||| ||||||    
T  17556827 agatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 11897112 - 11897053
Alignment:
Q  27 tcagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||    
T  11897112 tcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 47588393 - 47588335
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||  |||| || |||||||    
T  47588393 agatacatcaacttttgttgacccaaaattctcttataaataaaaccgaagggagtatt 47588335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 47969769 - 47969827
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| |||| |||||||| | |||||||||||||||||| |||||||    
T  47969769 agatacatcaacttttgttgatccaaaattattttataaataggaccggagggagtatt 47969827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 5392222 - 5392278
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    ||||||||||||||||||||| ||| |||||||||| || |||||| ||||||||||    
T  5392222 atacatcaacttttattgacctaaatttctcttatatattggaccgaagagagtatt 5392278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 21537941 - 21538001
Alignment:
Q  27 tcagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||||| ||||| |||  |||||||||||||| || |||||||||||||    
T  21537941 tcagatacatcaacttttgttgactcaattttctcttataaataagatcggagagagtatt 21538001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 11989857 - 11989911
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    ||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||    
T  11989857 atacatcaatttttattgactcaaatttcttttataaataggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 14984883 - 14984834
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||||    
T  14984883 acttttgttgacctaaatttctcttataaataggaccggagatagtattt 14984834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 23278057 - 23278021
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttat 65  Q
    |||||||||||||||| ||||||||||||||||||||    
T  23278057 agatacatcaacttttgttgacccaaaattctcttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 44953120 - 44953061
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    ||||||||||||||||||||||| ||||  | |||||||||||| | | |||||||||||    
T  44953120 cagatacatcaacttttattgactcaaatgtttcttataaatagaatcagagagagtatt 44953061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 37552214 - 37552272
Alignment:
Q  28 cagatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtat 86  Q
    |||||||||  | |||| |||||||||| ||||||||||||||||||||| | ||||||    
T  37552214 cagatacattcatttttgttgacccaaatttctcttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 11795979 - 11795930
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||| |||||| ||| |||||||||||||||||||||||  |||||||    
T  11795979 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 1050934 - 1050894
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  1050934 acttttgttgacctaaatttctcttataaataggaccggag 1050894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 9981693 - 9981653
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  9981693 acttttgttgacctaaatttctcttataaataggaccggag 9981653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 12483712 - 12483752
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  12483712 acttttgttgacctaaatttctcttataaataggaccggag 12483752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 26471149 - 26471189
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  26471149 acttttgttgacctaaatttctcttataaataggaccggag 26471189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 27159442 - 27159482
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  27159442 acttttgttgacctaaatttctcttataaataggaccggag 27159482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 31842879 - 31842919
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  31842879 acttttgttgacctaaatttctcttataaataggaccggag 31842919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 39402050 - 39402090
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  39402050 acttttgttgacctaaatttctcttataaataggaccggag 39402090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 44668177 - 44668217
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  44668177 acttttgttgacctaaatttctcttataaataggaccggag 44668217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 47216783 - 47216823
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  47216783 acttttgttgacctaaatttctcttataaataggaccggag 47216823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 12934 - 12992
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||    
T  12934 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtatt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 12906 - 12866
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  12906 acttttgttgacctaaatttctcttataaataggaccggag 12866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 6187 - 6129
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  6187 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 6129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 6215 - 6255
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  6215 acttttgttgacctaaatttctcttataaataggaccggag 6255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 23859 - 23917
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaataggaccggagagagtatt 87  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  23859 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 23917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 23831 - 23791
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggag 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  23831 acttttgttgacctaaatttctcttataaataggaccggag 23791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 49581 - 49635
Alignment:
Q  31 atacatcaacttttattgacccaaaattctcttataaataggaccggagagagta 85  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  49581 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 49551 - 49501
Alignment:
Q  39 acttttattgacccaaaattctcttataaataggaccggagagagtatttt 89  Q
    |||||| |||||| ||| |||||||||||||||||||||||  ||||||||    
T  49551 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 49501  T

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Target: scaffold1707 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 1409 - 1453
Alignment:
Q  29 agatacatcaacttttattgacccaaaattctcttataaatagga 73  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  1409 agatacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 231353 - 231300
Alignment:
Q  35 atcaacttttattgacccaaaattctcttataaataggaccggagagagtattt 88  Q
    |||||||||| |||||| || |||||| ||||||||||||||||| ||||||||    
T  231353 atcaacttttgttgacctaatattctcctataaataggaccggagggagtattt 231300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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